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Micro Weather Station

Improved in situ meteorological measurements in the troposphere and stratosphere are needed for studies of weather and climate, both as a primary data source and as validation for remote sensing instruments. Following the initial development and successful flight validation of the surface acoustic wave (SAW) hygrometer, the micro weather station program was directed toward the development of an integrated instrument, capable of accurate, in situ profiling of the troposphere, and small enough to fly on a radiosonde balloon for direct comparison with standard radiosondes. On April 23, 1998, working with Frank Schmidlin and Bob Olson of Wallops Island Flight Facility, we flew our instrument in a dual payload experiment, for validation and direct comparison with a Vaisala radiosonde. During that flight, the SAW dewpoint hygrometer measured frostpoint down to -76T at 44,000 feet. Using a laptop computer in radio contact with the balloon, we monitored data in real time, issued the cutdown command, and recovered the payload less than an hour after landing in White Sands Missile Range, 50 miles from the launch site in Hatch, New Mexico. Future flights will extend the intercomparison, and attempt to obtain in situ meteorological profiles from the surface through the tropopause. The SAW hygrometer was successfully deployed on the NASA DC8 as part of NASA's Third Convection and Moisture Experiment (CAMEX-3) during August and September, 1998. This field campaign was devoted to the study of hurricane tracking and intensification using NASA-funded aircraft. In situ humidity data from the SAW hygrometer are currently being analyzed and compared with data from other instruments on the DC8 and ER2 aircraft. Additional information is contained in the original.

Hoenk, Michael E.↗

The Journal of Open Source Software (JOSS): Bringing Open-Source Software Practices to the Scholarly Publishing Community for Authors, Reviewers, Editors, and Publishers

Open-source software (OSS) is a critical component of open science, but contributions to the OSS ecosystem are systematically undervalued in the current academic system. The Journal of Open Source Software (JOSS) contributes to addressing this by providing a venue (that is itself free, diamond open access, and all open-source, built in a layered structure using widely available elements/services of the scholarly publishing ecosystem) for publishing OSS, run in the style of OSS itself. A particularly distinctive element of JOSS is that it uses open peer review in a collaborative, iterative format, unlike most publishers. Additionally, all the components of the process—from the reviews to the papers to the software that is the subject of the papers to the software that the journal runs—are open. We describe JOSS’s history and its peer review process using an editorial bot, and we present statistics gathered from JOSS’s public review history on GitHub showing an increasing number of peer reviewed papers each year. We discuss the new JOSSCast and use it as a data source to understand reasons why interviewed authors decided to publish in JOSS. JOSS’s process differs significantly from traditional journals, which has impeded JOSS’s inclusion in indexing services such as Web of Science. In turn, this discourages researchers within certain academic systems, such as Italy’s, which emphasize the importance of Web of Science and/or Scopus indexing for grant applications and promotions. JOSS is a fully diamond open-access journal with a cost of around US$\$$5 per paper for the 401 papers published in 2023. The scalability of running JOSS with volunteers and financing JOSS with grants and donations is discussed.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗

NCBI’s Virus Discovery Codeathon: Building “FIVE” —The Federated Index of Viral Experiments API Index

Viruses represent important test cases for data federation due to their genome size and the rapid increase in sequence data in publicly available databases. However, some consequences of previously decentralized (unfederated) data are lack of consensus or comparisons between feature annotations. Unifying or displaying alternative annotations should be a priority both for communities with robust entry representation and for nascent communities with burgeoning data sources. To this end, during this three-day continuation of the Virus Hunting Toolkit codeathon series (VHT-2), a new integrated and federated viral index was elaborated. This Federated Index of Viral Experiments (FIVE) integrates pre-existing and novel functional and taxonomy annotations and virus–host pairings. Variability in the context of viral genomic diversity is often overlooked in virus databases. As a proof-of-concept, FIVE was the first attempt to include viral genome variation for HIV, the most well-studied human pathogen, through viral genome diversity graphs. As per the publication of this manuscript, FIVE is the first implementation of a virus-specific federated index of such scope. FIVE is coded in BigQuery for optimal access of large quantities of data and is publicly accessible. Many projects of database or index federation fail to provide easier alternatives to access or query information. To this end, a Python API query system was developed to enhance the accessibility of FIVE.

59 BASIC BIOLOGICAL SCIENCES↗

Legacy Survey of Space and Time Data Preview 1: Source searchable catalog

The Legacy Survey of Space and Time Data Preview 1 (DP1) is the first release of data from the NSF-DOE Vera C. Rubin Observatory. It consists of raw and calibrated single-epoch images, co-adds, difference images, detection catalogs, and other derived data products. DP1 is based on 1792 science-grade optical/near-infrared exposures acquired over 48 distinct nights by the Rubin Commissioning Camera, LSSTComCam, on the Simonyi Survey Telescope at the Summit Facility on Cerro Pachón, Chile during the first on-sky commissioning campaign in late 2024. DP1 covers a total of approximately 15 sq. deg. over seven roughly equally-sized non-contiguous fields, each independently observed in six broad photometric bands, ugrizy, spanning a range of stellar densities and latitudes and overlapping with external reference datasets. This dataset is a subset of the full data release consisting of a searchable catalog named Source. This catalog contains measurements for detected sources in processed visit images. This catalog contains 45,565,632 rows with 156 columns.

79 ASTRONOMY AND ASTROPHYSICS↗

An ontology-based knowledge graph for representing interactions involving RNA molecules

The "RNA world" represents a novel frontier for the study of fundamental biological processes and human diseases and is paving the way for the development of new drugs tailored to each patient's biomolecular characteristics. Although scientific data about coding and non-coding RNA molecules are constantly produced and available from public repositories, they are scattered across different databases and a centralized, uniform, and semantically consistent representation of the "RNA world" is still lacking. We propose RNA-KG, a knowledge graph (KG) encompassing biological knowledge about RNAs gathered from more than 60 public databases, integrating functional relationships with genes, proteins, and chemicals and ontologically grounded biomedical concepts. To develop RNA-KG, we first identified, pre-processed, and characterized each data source; next, we built a meta-graph that provides an ontological description of the KG by representing all the bio-molecular entities and medical concepts of interest in this domain, as well as the types of interactions connecting them. Finally, we leveraged an instance-based semantically abstracted knowledge model to specify the ontological alignment according to which RNA-KG was generated. RNA-KG can be downloaded in different formats and also queried by a SPARQL endpoint. A thorough topological analysis of the resulting heterogeneous graph provides further insights into the characteristics of the "RNA world". RNA-KG can be both directly explored and visualized, and/or analyzed by applying computational methods to infer bio-medical knowledge from its heterogeneous nodes and edges. The resource can be easily updated with new experimental data, and specific views of the overall KG can be extracted according to the bio-medical problem to be studied.

59 BASIC BIOLOGICAL SCIENCES↗

A Data-Driven Method for Synthetic Extreme Weather Generation and Solar Impact Assessment: Preprint

High-resolution, high-fidelity weather datasets are essential for testing and evaluating the resilience of power systems, particularly under extreme weather conditions. However, existing extreme weather datasets are typically derived from historical events that are localized and may lack the spatial and temporal resolution or scenario diversity needed to test largescale power systems. In this work, we propose a synthetic extreme weather simulation approach capable of generating targeted extreme events, such as hurricanes, using publicly available data sources. Preliminary results demonstrate the impact of a simulated Category 1 hurricane on renewable generation and critical infrastructure in California. The work aims to provide a flexible approach for creating multiple types of extreme weather scenarios across different regions, enabling comprehensive system stress testing, training, and resilience assessment.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Characterizing patterns and variability of building electric load profiles in time and frequency domains

The rapid development of advanced metering infrastructure provides a new data source—building electrical load profiles with high temporal resolution. Electric load profile characterization can generate useful information to enhance building energy modeling and provide metrics to represent patterns and variability of load profiles. Such characterizations can be used to identify changes to building electricity demand due to operations or faulty equipment and controls. In this study, we proposed a two-path approach to analyze high temporal resolution building electrical load profiles: (1) time-domain analysis and (2) frequency-domain analysis. Furthermore, the commonly adopted time-domain analysis can extract and quantify the distribution of key parameters characterizing load shape such as peak-base load ratio and morning rise time, while a frequency-domain analysis can identify major periodic fluctuations and quantify load variability. We implemented and evaluated both paths using whole-year 15-minute interval smart meter data of 188 commercial office building in Northern California. The results from these two paths are consistent with each other and complementary to represent full dynamics of load profiles. The time- and frequency-domain analyses can be used to enhance building energy modeling by: (1) providing more realistic assumptions about building operation schedules, and (2) validating the simulated electric load profiles using the developed variability metrics against the real building load data.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Hydrogen Life-Cycle Analysis in Support of Clean Hydrogen Production

Hydrogen is a basic molecule which is commonly used in the production of chemicals or as an energy carrier or a fuel. Its zero-carbon content means that it does not produce carbon dioxide upon its use. However, depending on the energy source and technology for hydrogen production and delivery, there can be greenhouse gas (GHG) emissions associated with the hydrogen for various end use applications. To provide the largest reduction in GHG emissions, hydrogen produced from clean energy sources should be used. As concerns regarding climate change grows, there is an increasing focus on economic production of clean hydrogen to displace less climate neutral sources of hydrogen. However, there are many different methods of hydrogen production with unique processes that result in different levels of life cycle GHG emissions of hydrogen production and its end use applications. Therefore, a comprehensive life cycle accounting methodology that takes all these factors into account is required. he GREET ® (Greenhouse gases, Regulated Emissions, and Energy use in Technologies) model was first developed in 1995 by Argonne National Laboratory with the support from the various offices of the U.S. Department of Energy (DOE). GREET provides in-depth Life Cycle Analysis (LCA) simulations for a variety of products and is available as an Excel spreadsheet (GREET Excel), or as an application (GREET .Net). Both versions are available for public download at no cost. This report accompanies GREET 2022 release to describe the major updates and expansions to the hydrogen technology pathways, and to provide data sources and sample carbon intensity results for each of the pathways.

08 HYDROGEN↗

Crop identification and acreage measurement utilizing ERTS imagery

The Statistical Reporting Service of the U.S. Department of Agriculture is evaluating ERTS-1 imagery as a potential tool for estimating crop acreage. A main data source for the estimates is obtained by enumerating small land parcels that have been randomly selected from the total U.S. land area. These small parcels are being used as ground observations in this investigation. The test sites are located in Missouri, Kansas, Idaho, and South Dakota. The major crops of interest are wheat, cotton, corn, soybeans, sugar beets, potatoes, oats, alfalfa, and grain sorghum. Some of the crops are unique to a given site while others are common in two or three states. This provides an opportunity to observe crops grown under different conditions. Results for the Missouri test site are presented. Results of temporal overlays, unequal prior probabilities, and sample classifiers are discussed. The amount of improvement that each technique contributes is shown in terms of overall performance. The results show that useful information for making crop acreage estimates can be obtained from ERTS-1 data.

Wigton, W. H.↗

San Diego Water Resources: Monitoring Pollution Plumes due to Storm and Wastewater Runoff in the San Diego Bay and Tijuana River Estuary to Inform Water Quality Management

Stormwater and wastewater runoff are a large source of pollutant discharge along the southern California coast and are a major concern to the health of local communities and ecosystems. In partnership with the Tijuana River National Estuarine Research Reserve and the California Department of Environmental Quality, NASA DEVELOP utilized satellite imagery to visualize and analyze the water quality of the Tijuana Estuary and southern California coast after major storm and wastewater events. Using Landsat 8 Operational Land Imager (OLI) and Sentinel-2 Multispectral Instrument (MSI), we estimated the extent and severity of plumes released from the Tijuana River Estuary. We used remotely sensed turbidity to map the extent of plumes, and used remotely sensed turbidity, Chlorophyll-a (chl-a), and colored dissolved organic matter (CDOM) to quantify and visualize stormwater, wastewater, and mixed plumes from 2013 to 2022. Furthermore, remotely sensed CDOM, turbidity, and chl-a were validated with in-situ data from NOAA and the San Diego Public Utilities in the San Diego coastal area to evaluate the accuracy of water quality data derived from satellite imagery. End products of this project include maps of stormwater, wastewater, and mixed plumes, tables illustrating the average area, CDOM, turbidity, and chl-a of each plume type, and validation graphs between satellite and in-situ data sources. These end products informed the environmental management of the Tijuana River National Estuarine Research Reserve and the public beaches in San Diego.

Ethan Gates↗

A framework for ensemble modelling of climate change impacts on lakes worldwide: the ISIMIP Lake Sector

Abstract. Empirical evidence demonstrates that lakes and reservoirs are warming across the globe. Consequently, there is an increased need to project future changes in lake thermal structure and resulting changes in lake biogeochemistry in order to plan for the likely impacts. Previous studies of the impacts of climate change on lakes have often relied on a single model forced with limited scenario-driven projections of future climate for a relatively small number of lakes. As a result, our understanding of the effects of climate change on lakes is fragmentary, based on scattered studies using different data sources and modelling protocols, and mainly focused on individual lakes or lake regions. This has precluded identification of the main impacts of climate change on lakes at global and regional scales and has likely contributed to the lack of lake water quality considerations in policy-relevant documents, such as the Assessment Reports of the Intergovernmental Panel on Climate Change (IPCC). Here, we describe a simulation protocol developed by the Lake Sector of the Inter-Sectoral Impact Model Intercomparison Project (ISIMIP) for simulating climate change impacts on lakes using an ensemble of lake models and climate change scenarios for ISIMIP phases 2 and 3. The protocol prescribes lake simulations driven by climate forcing from gridded observations and different Earth system models under various representative greenhouse gas concentration pathways (RCPs), all consistently bias-corrected on a 0.5∘ × 0.5∘ global grid. In ISIMIP phase 2, 11 lake models were forced with these data to project the thermal structure of 62 well-studied lakes where data were available for calibration under historical conditions, and using uncalibrated models for 17 500 lakes defined for all global grid cells containing lakes. In ISIMIP phase 3, this approach was expanded to consider more lakes, more models, and more processes. The ISIMIP Lake Sector is the largest international effort to project future water temperature, thermal structure, and ice phenology of lakes at local and global scales and paves the way for future simulations of the impacts of climate change on water quality and biogeochemistry in lakes.

58 GEOSCIENCES↗

GOOML - Real World Applications of Machine Learning in Geothermal Operations

GOOML (Geothermal Operational Optimization with Machine Learning) is a machine-learning based framework that enables geothermal power plant operators to explore optimization opportunities for their assets in an efficient and robust digital environment. Backed by real-world data sources, thermodynamic constraints and steamfield intelligence, the GOOML environment provides new tools to explore how to best operate steamfields as well as test new scenarios and configurations prior to implementation in the field. To prove the effectiveness of GOOML, we have undertaken optimization experiments using reinforcement learning (RL) to generate operational suggestions using a balance of mass-take targets, sustainability considerations and net generation. Our experiments use the GOOML construct to explore different field parameters and perform multiple reinforcement learning experiments. Like a comprehensive laboratory workbench, we can change out components of a steamfield to perform testing under a variety of conditions (restrict mass, increase pressure, reroute steam, etc.). This flexibility allows us to explore conditions that would require significant infrastructure changes in a real-world setting at a fraction of the cost and time in a digital environment. The results highlight the benefits of using digital twins and advanced data analytics for the geothermal industry.

forecasting↗

Integrated Medical Model Overview

The Integrated Medical Model (IMM) Project represents one aspect of NASA's Human Research Program (HRP) to quantitatively assess medical risks to astronauts for existing operational missions as well as missions associated with future exploration and commercial space flight ventures. The IMM takes a probabilistic approach to assessing the likelihood and specific outcomes of one hundred medical conditions within the envelope of accepted space flight standards of care over a selectable range of mission capabilities. A specially developed Integrated Medical Evidence Database (iMED) maintains evidence-based, organizational knowledge across a variety of data sources. Since becoming operational in 2011, version 3.0 of the IMM, the supporting iMED, and the expertise of the IMM project team have contributed to a wide range of decision and informational processes for the space medical and human research community. This presentation provides an overview of the IMM conceptual architecture and range of application through examples of actual space flight community questions posed to the IMM project.

Spae Adaptation Syndrome↗

Three Conservation Applications of Astronaut Photographs of Earth: Tidal Flat Loss (Japan), Elephant Impacts on Vegetation (Botswana), and Seagrass and Mangrove Monitoring (Australia)

NASA photographs taken from low Earth orbit can provide information relevant to conservation biology. This data source is now more accessible due to improvements in digitizing technology, Internet file transfer, and availability of image processing software. We present three examples of conservation-related projects that benefited from using orbital photographs. (1) A time series of photographs from the Space Shuttle showing wetland conversion in Japan was used as a tool for communicating about the impacts of tidal flat loss. Real-time communication with astronauts about a newsworthy event resulted in acquiring current imagery. These images and the availability of other high resolution digital images from NASA provided timely public information on the observed changes. (2) A Space Shuttle photograph of Chobe National Park in Botswana was digitally classified and analyzed to identify the locations of elephant-impacted woodland. Field validation later confirmed that areas identified on the image showed evidence of elephant impacts. (3) A summary map from intensive field surveys of seagrasses in Shoalwater Bay, Australia was used as reference data for a supervised classification of a digitized photograph taken from orbit. The classification was able to distinguish seagrasses, sediments and mangroves with accuracy approximating that in studies using other satellite remote sensing data. Orbital photographs are in the public domain and the database of nearly 400,000 photographs from the late 1960s to the present is available at a single searchable location on the Internet. These photographs can be used by conservation biologists for general information about the landscape and in quantitative applications.

Lulla, Kamlesh P.↗

Efficient Methods to Assimilate Satellite Retrievals Based on Information Content: Suboptimal Retrieval Assimilation - Part 2

One of the outstanding problems in data assimilation has been and continues to be how best to utilize satellite data while balancing the tradeoff between accuracy and computational cost. A number of weather prediction centers have recently achieved remarkable success in improving their forecast skill by changing the method by which satellite data are assimilated into the forecast model from the traditional approach of assimilating retrievals to the direct assimilation of radiances in a variational framework. The operational implementation of such a substantial change in methodology involves a great number of technical details, e.g., pertaining to quality control procedures, systematic error correction techniques, and tuning of the statistical parameters in the analysis algorithm. Although there are clear theoretical advantages to the direct radiance assimilation approach, it is not obvious at all to what extent the improvements that have been obtained so far can be attributed to the change in methodology, or to various technical aspects of the implementation. The issue is of interest because retrieval assimilation retains many practical and logistical advantages which may become even more significant in the near future when increasingly high-volume data sources become available. The central question we address here is: how much improvement can we expect from assimilating radiances rather than retrievals, all other things being equal? We compare the two approaches in a simplified one-dimensional theoretical framework, in which problems related to quality control and systematic error correction are conveniently absent. By assuming a perfect radiative transfer model and perfect knowledge of radiance and background error covariances, we are able to formulate a nonlinear local error analysis for each assimilation method. Direct radiance assimilation is optimal in this idealized context, while the traditional method of assimilating retrievals is suboptimal because it ignores the cross-covariances between background errors and retrieval errors. We show that interactive retrieval assimilation (where the same background used for assimilation is also used in the retrieval step) is equivalent to direct assimilation of radiances with suboptimal analysis weights. We illustrate and extend these theoretical arguments with several one-dimensional assimilation experiments, where we estimate vertical atmospheric profiles using simulated data from both the High-resolution InfraRed Sounder 2 (HIRS2) and the future Atmospheric InfraRed Sounder (AIRS).

Joiner, J.↗

ComStock Measure Documentation: Thermostat Setbacks During Unoccupied Periods

This report assesses the potential for nationwide adoption of thermostat setbacks in appropriate applications. Building on the 3-year End-Use Load Profiles project to calibrate and validate the U.S. Department of Energy’s ResStock™ and ComStock™ models, this work produces national datasets that enable cities, states, utilities, and other stakeholders to answer a broad range of questions regarding their commercial building stock. ComStock is a highly granular, bottom-up model that uses various data sources, statistical sampling methods, and advanced building energy simulations to estimate the annual sub-hourly energy consumption of the commercial building stock across the United States. The “baseline” model intends to represent the U.S. commercial building stock as it existed in 2018. The methodology of the baseline model is discussed in the ComStock Reference Documentation. The goal of this work is to develop energy efficiency and demand flexibility measures that cover market-ready technologies and study their mass-adoption impact on the baseline building stock. “Measures” refers to various “what-if” scenarios that can be applied to buildings. The results for the baseline and measure scenario simulations are published in public datasets that provide insights into building stock characteristics, operational behaviors, utility bill impacts, and annual and sub-hourly energy usage by fuel type and end use. This report describes the modeling methodology for a single ComStock measure scenario— Thermostat Setbacks During Unoccupied Periods—and briefly introduces key results. The full public dataset can be accessed on the ComStock data lake or via the Data Viewer at comstock.nrel.gov. The public dataset enables users to create custom aggregations of results for their use cases (e.g., filter to a specific county or building type).

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Scaling Building Energy Audits through Machine Learning Methods on Novel Drone Image Data

Building energy audits are time-consuming and labor-intensive. This paper describes a new method using machine learning (ML) techniques on novel data sources (drone images) to improve the identification of building characteristics and retrofit opportunities, and thereby reduce the effort for audits. The new ML method includes: (1) Building footprint extraction using line extraction, polygonization, and polygon-merging, (2) Building envelope extraction using PIX4d modeling software to reconstruct a building 3D model, (3) Visualization tool for viewing images from the 3D model, (4) Window-to-wall ratio (WWR) using state-of-art deep neural network semantic segmentation, (5) Envelope thermal anomaly detection using an unsupervised machine learning clustering algorithm, and (6) Rooftop energy equipment detection based on an object detection algorithm. The testing of this method involved a comparison of additional ML-generated information overlaid on current ‘state-of-practice’ audit and remote assessment baselines using evaluation metrics: labor time and associated cost, marginal benefits of using ML-generated information in workflows for audits and remote assessments, integration potential with existing processes and tools, and replicability/scalability of the method. In two test buildings in California that had comprehensive drawings and meter data available, the ML method effectively generated a building footprint, envelope, rooftop equipment, WWR, and locations of envelope thermal anomalies. Projected target segments of the ML method are sites with minimal drawings and energy data, and underserved sectors such as multistoried housing, disadvantaged communities, and schools for which the ML method can enable identification of building asset characteristics and prioritization of envelope retrofits and decentralized energy equipment retrofits.

Singh, Reshma↗

A data-driven global soil heterotrophic respiration dataset and the drivers of its inter-annual variability

Soil heterotrophic respiration (SHR), one of the primary carbon fluxes from terrestrial ecosystems to the atmosphere, is important for carbon-climate feedbacks because of its sensitivity to available litter and soil carbon, climatic conditions, and nutrient availability. However, until recently limited SHR data were available, and most published global SHR estimates have either a short time span, coarse spatial resolution, or reply on overly-simple model formulations. To better understand and quantify the global distribution of SHR and its sensitivity to climate variability, we produced a new global SHR dataset using Random Forest algorithms, up-scaling 455 point data from the Global Soil Respiration Database (SRDB 4.0) with gridded fields of climatic, edaphic and productivity as explanatory variables. We estimated a global total SHR of 46.8 Pg C yr-1 over 1985-2013 (95% confidence interval: 38.6-56.3 Pg C yr-1), with a significant increasing trend of 0.03 Pg C yr-2 during this period. We found that the choice of soil moisture datasets contributes more to the difference among these data-driven SHR members rather than that of productivity, temperature and precipitation data sources. We also analyzed the influence of climatic variables on the inter-annual variability (IAV) of our SHR product. Water availability was the dominant driver of IAV at global scales, although the inferred sensitivity depends on the choice of the soil moisture gridded dataset. At the ecosystem scale, temperature strongly controls the IAV of SHR in tropical forests, while water availability dominates in extra-tropical forest and semi-arid regions. Our machine-learning gridded SHR dataset and outputs from process-based land surface models (TRENDYv6) show agreement for a strong association between water variability and SHR IAV at the global scale, but the two approaches lead to different temporal trend globally and different controlling variables for IAV at the ecosystem scale. Our study provides evidence for the pervasive and important role of water availability in driving SHR, indicating both a direct effect limiting decomposition rates and an indirect effect through the amount of fresh organic matter made available to SHR from productivity. In consideration of potential limitations and uncertainties remaining in our data-driven SHR datasets, we call for a more scientifically designed observation network for SHR, more observation data compilation, and increased use of deep learning methods making maximum use of observation data in hand. This will benefit process-based models, and improve our understanding of SHR response to future anomalous environmental conditions.

Yao, Yitong↗