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At least 109 records · Page 6

Patterns and Predictors of Failure in Recurrent or Refractory Large B-Cell Lymphomas After Chimeric Antigen Receptor T-Cell Therapy

Chimeric antigen receptor T-cell (CAR T) therapy is capable of eliciting durable responses in patients with relapsed/refractory (R/R) lymphomas. However, most treated patients relapse. Patterns of failure after CAR T have not been previously characterized, and may provide insights into the mechanisms of resistance guiding future treatment strategies.

62 RADIOLOGY AND NUCLEAR MEDICINE↗

Block Tectonics across Western Tibet and Multi-Millennial Recurrence of Great Earthquakes on the Karakax Fault

We report that fault slip rates are critical to quantify continental deformation. Those along the Karakax fault (northwestern Altyn Tagh Fault: ATF) have been debated, even though it is one of Tibet's most outstanding active faults. At Taersa, using LiDAR measurements of terrace and fan riser offsets (~6 to ~500 m) and 10 Be/ 26 Al dating of alluvial surfaces (<210 ka), we obtain a late Quaternary slip rate of ~2.5 ± 0.5 mm/yr. This doubles the ~2.6 ± 0.5 mm/yr rate time span found to the east and west. We interpret the ~150 km-long, free-faced rupture along the fault to be that of the M ~ 7.6 event felt in Hotan in 1882. Characteristic slip (~6 m) during four large earthquakes since ~10 ka implies a ~2500 ± 500 years return time. A ~3 mm/yr rate is consistent with the ~80 km offset of the Karakax river since uplift of the West Kunlun range and sediment deposition in the Tarim foreland accelerated, ~24 Ma ago. The faster slip rate (~10.5 mm/yr) on the central ATF matches the sum of those along the reactivated West Tibetan terrane boundaries (Karakax and Longmu-Gozha Co faults) at the Uzatagh triple junction (~36°N, 83°E). The abrupt termination and altitude drop of the Karakorum range where the Longmu Co and Karakorum faults meet (Angmong junction), also reflect triple junction kinematics. Such localized changes account for the rise of the Karakorum and West Kunlun ranges and support lithospheric block tectonics rather than diffusely distributed deformation.

58 GEOSCIENCES↗

Temporal Subsampling Diminishes Small Spatial Scales in Recurrent Neural Network Emulators of Geophysical Turbulence

The immense computational cost of traditional numerical weather and climate models has sparked the development of machine learning (ML) based emulators. Because ML methods benefit from long records of training data, it is common to use data sets that are temporally subsampled relative to the time steps required for the numerical integration of differential equations. Here, we investigate how this often overlooked processing step affects the quality of an emulator's predictions. We implement two ML architectures from a class of methods called reservoir computing: (a) a form of Nonlinear Vector Autoregression (NVAR), and (b) an Echo State Network (ESN). Despite their simplicity, it is well documented that these architectures excel at predicting low dimensional chaotic dynamics. We are therefore motivated to test these architectures in an idealized setting of predicting high dimensional geophysical turbulence as represented by Surface Quasi-Geostrophic dynamics. In all cases, subsampling the training data consistently leads to an increased bias at small spatial scales that resembles numerical diffusion. Interestingly, the NVAR architecture becomes unstable when the temporal resolution is increased, indicating that the polynomial based interactions are insufficient at capturing the detailed nonlinearities of the turbulent flow. The ESN architecture is found to be more robust, suggesting a benefit to the more expensive but more general structure. Spectral errors are reduced by including a penalty on the kinetic energy density spectrum during training, although the subsampling related errors persist. Future work is warranted to understand how the temporal resolution of training data affects other ML architectures.

58 GEOSCIENCES↗

Alfvén eigenmode classification based on ECE diagnostics at DIII-D using deep recurrent neural networks

Modern tokamaks have achieved significant fusion production, but further progress towards steady-state operation has been stymied by a host of kinetic and MHD instabilities. Control and identification of these instabilities is often complicated, warranting the application of data-driven methods to complement and improve physical understanding. In particular, Alfvén eigenmodes are a class of ubiquitous mixed kinetic and MHD instabilities that are important to identify and control because they can lead to loss of confinement and potential damage to the walls of a plasma device. In the present work, we use reservoir computing networks to classify Alfvén eigenmodes in a large labeled database of DIII-D discharges, covering a broad range of operational parameter space. However, despite the large parameter space, we show excellent classification and prediction performance, with an average hit rate of 91% and false alarm ratio of 7%, indicating promise for future implementation with additional diagnostic data and consolidation into a real-time control strategy.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Recurrent pattern of extreme fire weather in California

Abstract Historical wildfire events in California have shown a tendency to occur every five to seven years with a rapidly increasing tendency in recent decades. This oscillation is evident in multiple historical climate records, some more than a century long, and appears to be continuing. Analysis shows that this 5–7 year oscillation is linked to a sequence of anomalous large-scale climate patterns with an eastward propagation in both the ocean and atmosphere. While warmer temperature emerges from the northern central Pacific to the west coast of California, La Niña pattern develops simultaneously, implying that the lifecycle of the El Niño-Southern Oscillation that takes multiple years to form could be a trigger. The evolving patterns of the Pacific-to-North America atmospheric teleconnection suggest the role of tropical and subtropical forcing embedded in this lifecycle. These results highlight the semi-cyclical hydrological behavior as a climate driver for wildfire variability in California.

Environmental Sciences & Ecology↗

Recurrent acquisition of nuclease-protease pairs in antiviral immunity

Antiviral immune systems diversify by integrating new genes into existing pathways, creating new mechanisms of viral resistance. We identified genes encoding a predicted nuclease paired with a trypsin-like protease repeatedly acquired by multiple, otherwise unrelated antiviral immune systems in bacteria. Cell-based and biochemical assays revealed that the nuclease is a proenzyme that cleaves DNA only after activation by its partner protease. Two distinct immune systems, Hachiman and AVAST (antiviral adenosine triphosphatase/nucleoside triphosphatase of the STAND superfamily, Avs), use the same mechanism of proteolytic activation despite their independent evolutionary origins. Examination of nuclease-protease inheritance patterns identified caspase-nuclease (canu) genomic loci that confer antiviral defense in a pathway reminiscent of eukaryotic caspase activation. These results uncover the coordinated activities of pronucleases and their activating proteases within different immune systems and show how coevolution enables defense system innovation.

Tuck, Owen T↗

Enhancing the Operational Resilience of Advanced Reactors with Digital Twins by Recurrent Neural Networks

Because of a lack of operational data and uncertainty in evaluation model for abnormal and accident scenarios, the established operating procedures can be biased in characterizing the reactor states and ensuring operational resilience. To reduce uncertainty associated with actual plant conditions, digital twin (DT) technology is suggested to support operator’s decision-making by effectively extracting and using knowledge of the current and future plant states from the knowledge base. This study first builds a knowledge base based on the characterization of issue space and the simulation tool. Next, this study discusses diagnosis and prognosis DTs for enhancing operational resilience by recovering the complete states of reactors and by predicting the future reactor behaviors. Finally, the decision-making module of the control system can determine the optimal control strategy that meets operational goals during loss-of-flow scenarios. To demonstrate and evaluate the DTs capability for supporting the operations of nuclear reactors, this study develops and assesses both the diagnosis and prognosis DTs in a nearly autonomous management and control system for an Experimental Breeder Reactor-II simulator during different loss-of-flow scenarios.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

Discovery of Signatures, Anomalies, and Precursors in Synchrophasor Data with Matrix Profile and Deep Recurrent Neural Networks (Final Project Report)

The widespread deployment of phasor measurement unit (PMU) across the U.S. together with the burgeoning machine learning technology made it possible to develop data-driven PMU data analytics to improve grid security and reliability in a more insightful and effective manner. Although PMU applications have been explored for over a decade, the representative PMU usage is limited to the bulk power system monitoring mainly due to the data integrity issues associated with PMUs (typically missing, fragmented, and wrongly amplified data). To forge a breakthrough on this stalemate and embrace PMUs for power system control and protection as well, we applied various advanced machine learning and big data analysis technology to the power system event detection and classification as the first step toward the power system control and protection pertaining to grid security enhancement.

24 POWER TRANSMISSION AND DISTRIBUTION↗