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At least 109 records · Page 6

Control of Epitaxial BaFe 2 As 2 Atomic Configurations with Substrate Surface Terminations

Atomic layer controlled growth of epitaxial thin films of unconventional superconductors opens the opportunity to discover novel high temperature superconductors. For instance, the interfacial atomic configurations may play an important role in superconducting behavior of monolayer FeSe on SrTiO 3 and other Fe-based superconducting thin films. Here, we demonstrate a selective control of the atomic configurations in Co-doped BaFe 2 As 2 epitaxial thin films and its strong influence on superconducting transition temperatures by manipulating surface termination of (001) SrTiO 3 substrates. In a combination of first-principles calculations and high-resolution scanning transmission electron microscopy imaging, we show that Co-doped BaFe 2 As 2 on TiO 2 -terminated SrTiO 3 is a tetragonal structure with an atomically sharp interface and with an initial Ba layer. In contrast, Co-doped BaFe 2 As 2 on SrO-terminated SrTiO 3 has a monoclinic distortion and a BaFeO 3-x initial layer. Furthermore, the superconducting transition temperature of Co-doped BaFe 2 As 2 ultrathin films on TiO 2 -terminated SrTiO 3 is significantly higher than that on SrO-terminated SrTiO 3 , which we attribute to shaper interfaces with no lattice distortions. As a result, this study allows the design of the interfacial atomic configurations and the effects of the interface on superconductivity in Fe-based superconductors.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Cost impact of hexose-to-pentose sugar ratios for biomanufacturing

Central to the long-term vision for biomanufacturing is the ability to deconstruct plant cell walls to sugars that microbes can convert to products. Aside from glucose, the most abundant sugar in biomass is xylose, a pentose sugar. Industrially relevant microbes have been engineered to co-ferment xylose and glucose. Most nth plant technoeconomic analyses (TEAs) assume similar consumption rates and product yields for both sugars, but in reality, xylose is consumed more slowly. Feedstocks can be selected, or engineered, to alter the glucan-to-xylan ratio (GXR) but no TEAs have quantified the impact of this strategy systematically. This study explores the cost impacts of varying the glucan-to-xylan ratio (GXR) from 1.9 to 6.7 for co-fermenting glucose and xylose to ethanol and bisabolene. The minimum selling prices (MSPs) for both products decrease as the GXR increases, with the largest reductions at shorter residence times. For instance, with an increase in GXR from 1.9 to 6.7, ethanol’s MSP drops by 16 %, 5 %, and 3 % at 24, 72, and 144 h, respectively, while bisabolene’s MSP declines by 23 %, 20 %, and 15 % at 24, 72, and 120 h. Particularly for early-stage commercialization, the results suggest that altering or selecting for feedstocks with higher GXR can minimize capital costs by reducing optimal residence times. Capital-constrained biorefineries operating with shorter residence times can justify paying up to 1.5X to 2X the price for feedstocks with a higher GXR, based on the expected improvements in their product yield and overall process economics.

Delayed xylose utilization↗

BULKI-Store v0.3.2

BULKI-Store is a distributed object storage system optimized for high-performance computing environments. Built with a Rust core and Python bindings, it efficiently manages scientific and machine learning datasets across HPC clusters. The system employs a client-server architecture with MPI integration, enabling seamless scaling on supercomputers like Perlmutter. BULKI-Store's object-oriented approach provides intuitive data organization with rich metadata support, contrasting with traditional file-based solutions. Key optimizations include selective checkpoint loading, unified checkpoint files, and object chunking for large data transfers. For machine learning workloads, BULKI-Store offers advantages through fine-grained access patterns, dynamic data sharing between training instances, and reduced memory pressure. Memory management features include strategic Python GC calls, minimized data copies, and batch processing capabilities. The system leverages Rayon's thread pool for asynchronous data prefetching and supports multiple CPU architectures (ARM64, x86, AMD, RISC-V). By combining performance optimizations with developer-friendly APIs, BULKI-Store addresses the complex data management challenges of modern HPC applications while maintaining compatibility across heterogeneous computing environments.

Zhang, Wei [Lawrence Berkeley National Laboratory ↗

TEAL Output Visualization

Tool for Economic Analysis (TEAL) is an open-source economics calculation package written and maintained by Idaho National Laboratory (INL). As a plugin of the Risk Analysis Virtual ENvironment (RAVEN), TEAL provides economics analysis models to RAVEN workflow users. In addition, TEAL is used in other RAVEN plugins such as LOGOS and the Holistic Energy Resource Optimization Network (HERON) to complement other analyses with economic calculations. This report documents the efforts in developing the capability of TEAL output visualization for users to better understand and investigate TEAL simulation results. In the past, outputs (e.g., various cash flows) were generated and printed to screen. According to the need and purpose for visualization, users can select various bar charts and donut charts to visualize the cash flows including inflows, outflows, and net cash flows in each year or in a selected time range, in addition to observing data stored in comma-separated value files (CSVs). The visualization capability is flexible and user-friendly by introducing several user-defined parameters, for instance, the start and the end project year of interest and the type of colors to be assigned to the cash flows.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

The 2018 Edition of the IRPhEP Handbook

The International Reactor Physics Experiment Evaluation Project (IRPhEP) was established to preserve and evaluate integral reactor physics experiment data, including separate or special effects measurements for nuclear energy and technology applications. Numerous international experiments have been performed over the past several decades to support reactor operations, safety, measurements, and design. Those experiments represent a significant investment of infrastructure, cost, and expertise that, in many instances, cannot be as easily reproduced. They represent valuable resources of data for present and future research, and provide the basis for recording, development, and validation of methods. Contributors worldwide collaborate to evaluate and review selected benchmark experiments for inclusion in the International Handbook of Evaluated Reactor Physics Benchmark Experiments (IRPhEP Handbook). Several new evaluations, and revisions to existing benchmarks have been prepared for inclusion in the 2018 edition of the IRPhEP Handbook. Additionally, an IRPhEP Uncertainty Guide was discussed to provide further guidance regarding the evaluation of reactor physics measurements besides criticality. Recent changes to the IRPhEP Handbook include five minor revisions, the revision of a previous benchmark evaluation to include new data, publication of a new draft benchmark evaluation, final approval for the formal publication of two formerly draft benchmark evaluations, and the inclusion of ten new benchmark evaluations. The IRPhEP Handbook now contains a total of 159 experimental measurement series from 54 unique reactor facilities. International participants are actively engaged in ongoing evaluation activities to prepare content for future editions of the IRPhEP Handbook. There are numerous experiment and reactor facilities worldwide from which benchmark data can be evaluated. Those interested in serving as evaluators and/or reviewers for the IRPhEP are encouraged to participate.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Cbp1, a fungal virulence factor under positive selection, forms an effector complex that drives macrophage lysis

Intracellular pathogens secrete effectors to manipulate their host cells. Histoplasma capsulatum (Hc) is a fungal intracellular pathogen of humans that grows in a yeast form in the host. Hc yeasts are phagocytosed by macrophages, where fungal intracellular replication precedes macrophage lysis. The most abundant virulence factor secreted by Hc yeast cells is Calcium Binding Protein 1 (Cbp1), which is absolutely required for macrophage lysis. Here we take an evolutionary, structural, and cell biological approach to understand Cbp1 function. We find that Cbp1 is present only in the genomes of closely related dimorphic fungal species of the Ajellomycetaceae family that lead primarily intracellular lifestyles in their mammalian hosts (Histoplasma, Paracoccidioides, and Emergomyces), but not conserved in the extracellular fungal pathogen Blastomyces dermatitidis. We observe a high rate of fixation of non-synonymous substitutions in the Cbp1 coding sequences, indicating that Cbp1 is under positive selection. We determine the de novo structures of Hc H88 Cbp1 and the Paracoccidioides americana (Pb03) Cbp1, revealing a novel “binocular” fold consisting of a helical dimer arrangement wherein two helices from each monomer contribute to a four-helix bundle. In contrast to Pb03 Cbp1, we show that Emergomyces Cbp1 orthologs are unable to stimulate macrophage lysis when expressed in the Hc cbp1 mutant. Consistent with this result, we find that wild-type Emergomyces africanus yeast are able to grow within primary macrophages but are incapable of lysing them. Finally, we use subcellular fractionation of infected macrophages and indirect immunofluorescence to show that Cbp1 localizes to the macrophage cytosol during Hc infection, making this the first instance of a phagosomal human fungal pathogen directing an effector into the cytosol of the host cell. We additionally show that Cbp1 forms a complex with Yps-3, another known Hc virulence factor that accesses the cytosol. Taken together, these data imply that Cbp1 is a fungal virulence factor under positive selection that localizes to the cytosol to trigger host cell lysis.

59 BASIC BIOLOGICAL SCIENCES↗

A Piecewise Local Partial Least Squares (PLS) Method for the Quantitative Analysis of Plutonium Nitrate Solutions

We have developed a piecewise local (PL) partial least squares (PLS) analysis method for total plutonium measurements by absorption spectroscopy in nitric acid-based nuclear material processing streams. Instead of using a single PLS model that covers all expected solution conditions, the method selects one of several local models based on an assessment of solution absorbance, acidity, and Pu oxidation state distribution. The local models match the global model for accuracy against the calibration set, but were observed in several instances to be more robust to variations associated with measurements in the process. The improvements are attributed to the relative parsimony of the local models. Not all of the sources of spectral variation are uniformly present at each part of the calibration range. Thus, the global model is locally overfitting and susceptible to increased variance when presented with new samples. A second set of models quantifies the relative concentrations of Pu(III), (IV), and (VI). Standards containing a mixture of these species were not at equilibrium due to a disproportionation reaction. Therefore, a separate principal component analysis is used to estimate of the concentrations of the individual oxidation states in these standards in the absence of independent confirmatory analysis. The PL analysis approach is generalizable to other systems where the analysis of chemically complicated systems can be aided by rational division of the overall range of solution conditions into simpler sub-regions.

47 OTHER INSTRUMENTATION↗

Towards a NEAMS-based high-fidelity model of the MARVEL reactor

This report outlines the progress of Idaho National Laboratory in developing a high-fidelity and high-resolution model of the Microreactor Applications Research Validation and Evaluation reactor. The model was developed under the Nuclear Energy Advanced Modeling and Simulation microreactor application driver at Idaho National Laboratory. The overarching objective of this activity is the development of a high-fidelity multiphysics MARVEL model using NEAMS tools, and to verify and validate NEAMS tools against MARVEL reference simulation and experimental data, respectively. This is a unique opportunity to conduct multiphysics analysis on a soon-to-be-deployed microreactor. This multiphysics model developed under the NEAMS-funded INL microreactor application driver leverages three single-physics models coupled via the MOOSE’s MultiApp and Transfer systems. The latter systems enable in-memory data transfer between MOOSE-based and MOOSE-wrapped applications. The first single-physics model, that functions as main application, leverages Griffin to model the neutron transport in the core through the discontinuous finite element (DFEM) discrete ordinates solver (SN). Several optimization flags that were developed by the Griffin developer team were beta-tested to enhance the solver’s performance. These include the combined use of using_average_xs and update_averaged_xs_on that enable to avoid expensive on-the-fly cross sections evaluations at each linear iterations in favor of evaluations of the macroscopic cross sections at each Picard iteration. The second single-physics model uses BISON to handle solid heat transfer and asymptotic hydrogen redistribution analysis in the fuel. While the model returns consistent results for the temperature and hydrogen distribution in the fuel, a mismatch was noticed in the calculated temperature in the reflector due to the value of the gap conductance used in our model. Ongoing investigations are being performed to assess the origin of this discrepancy. Finally, the System Analysis Module (SAM) was used to model the flow of the sodium-potassium eutectic in the primary loop. A first verification was also performed showing good agreement in terms of mass flow rate and inlet temperature. All mesh files were generated using the MOOSE Reactor module, removing the need for external meshing tools. Notably, this workscope represents one of the initial applications of the MOOSE Reactor module for modeling highly irregular geometries. The use of the reactor module significantly streamlined the mesh generation process. The full multiphysics mode, that combines all the single physics models, was leveraged to conduct initial steady-state multiphysics simulations to compute power, and temperature distribution in the reactor. Initial testing was performed for transient simulations as well. In this case, the new checkpoint restart capability for eigenvalue calculations was tested showing the capability for streamlined restart of transient calculations. Future work will focus on improving the fidelity of the model by performing comprehensive code-to-code comparisons. For instance, the full-core Griffin neutronics model will be benchmarked against MCNP reference results, that were provided by the MARVEL design team. Additionally, the SAM T/H model will be verified against reference RELAP-5 results for selected accident scenarios. Besides code-to-code verification exercises, the model fidelity will be improved by replacing the single-channel SAM model with a more complex SAM-Pronghorn coupled model, in which the sub-channel capability is deployed to obtain radial temperature resolution in the coolant. This model will be developed in synergy with the NEAMS thermal hydraulics team.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

Direct Extraction of Lanthanide Oxides and Nitrates in Tributyl Phosphate

This work investigated the dissolution rate of lanthanide oxides and nitrates in a 30 vol % TBP-n-paraffin solvent (pre-equilibrated with various nitric acid concentrations) using visible (Vis) spectroscopy over time. Some dissolution mechanics were observed, such as an aqueous layer forming, considerably longer dissolution times for the heavier lanthanides (hours) vs. the lighter lanthanides (minutes), and the impacts of mixing lanthanide oxides or nitrates during dissolution. Neodymium, samarium, holmium, and erbium were selected due to their unique spectroscopic signatures and to represent the lighter (neodymium and samarium) and heavier (holmium and erbium) lanthanides. Even though europium does not have a strong absorbance in the range studied, europium was used in some instances to also represent the lighter lanthanides. Cerium oxide was used to representant dissolution of tetravalent lanthanides.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Methods and data structures for efficient cross-referencing of physical-asset spatial identifiers

Described herein are methods, systems, and storage media having computer-processable instructions for cross-referencing in a computationally efficient manner different data sets each having pluralities of n-dimensional identifiers of physical assets. The disclosed cross-referencing approach can be used to determine relationships between different assets and their respective asset identifier strings. The relationships can be established based on user-selected heuristics. For example, at least two asset identifier strings can be compared, and user-defined heuristics can be applied to determine whether “a match” exists. A match can be defined according to the particular heuristic. In one instance, the comparison and heuristic can be applied to determine if two different asset identifier strings refer to a single physical asset.

Borkum, Mark I.↗

Broadband cross polarization for ultra-wideline magic-angle spinning NMR

Over the past decade, there has been a sustained interest in using frequency-swept (FS) pulses for the efficient acquisition of wideline and ultra-wideline (UW) NMR powder patterns. Such experiments are typically conducted under static conditions, employing both direct- and indirect-excitation methods (i.e., WCPMG and BRAIN-CP/WCPMG, respectively). Recently, Koppe et al. demonstrated that the WCPMG pulse sequence can be used to efficiently acquire wideline and UW NMR spectra with spinning sideband (SSB) manifolds under magic-angle spinning (MAS) conditions, capitalizing on the increased signal-to-noise ratios (SNR) afforded by MAS. To date, there have been only a few instances of broadband cross-polarization (CP) experiments using FS pulses under MAS conditions and no applications to systems exhibiting wideline and/or ultra-wideline powder patterns, despite the clear advantages these experiments could offer. Herein, we demonstrate that FS pulses selectively applied to a single sideband of the S spin can be used for efficient 1 H-S polarization transfer to S = 1/2 nuclides with large anisotropic chemical shift interactions at slow to moderate MAS rates. The Hartmann–Hahn matching conditions in BRAIN-CP/WCPMG-MAS experiments bear similarity to those of standard CP sequences, yet operate over UW frequency ranges and only require low-amplitude RF pulses on the S channel. Crucial to the success of the BRAIN-CP/WCPMG-MAS experiment is careful calibration of the RF amplitude, transmitter offset, and effective frequency sweep of the FS pulse applied to the S spins at a given MAS rate. Thus, by means of numerical simulations and experimental testing, we provide recommendations for the parameterization and setup of BRAIN-CP/WCPMG-MAS experiments for their most efficient use. Results showcasing the capability of the BRAIN-CP/WCPMG-MAS pulse sequence are presented, including applications to 119 Sn, 195 Pt, and 103 Rh NMR.

Kimball, James J. [Florida State University, Talla↗

Modeling of Cloud Microphysics: Can We Do Better?

Representation of cloud microphysics is a key aspect of simulating clouds. From the early days of cloud modeling, numerical models have relied on an Eulerian approach for all cloud and thermodynamic and microphysics variables. Over time the sophistication of microphysics schemes has steadily increased, from simple representations of bulk masses of cloud and rain in each grid cell, to including different ice particle types and bulk hydrometeor concentrations, to complex schemes referred to as bin or spectral schemes that explicitly evolve the hydrometeor size distributions within each model grid cell. As computational resources grow, there is a clear trend toward wider use of bin schemes, including their use as benchmarks to develop and test simplified bulk schemes. We argue that continuing on this path brings fundamental challenges difficult to overcome. The Lagrangian particle-based probabilistic approach is a practical alternative in which the myriad of cloud and precipitation particles present in a natural cloud is represented by a judiciously selected ensemble of point particles called superdroplets or superparticles. Here, the advantages of the Lagrangian particle-based approach when compared to the Eulerian bin methodology are explained, and the prospects of applying the method to more comprehensive cloud simulations—for instance, targeting deep convection or frontal cloud systems—are discussed.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Effects of ambient humidity and temperature on the NO 2 sensing characteristics of WS 2 /graphene aerogel

The effects of ambient humidity and temperature on the NO 2 sensing characteristics of WS 2 /graphene aerogel (WS 2 /GA) composite are investigated. In order to probe the gas sensing performances of WS 2 /GA, the sensor is fabricated by integrating WS 2 /GA with a microfabricated two-electrode device. The WS 2 /GA is characterized by scanning electron microscopy (SEM), transmission electron microscopy (TEM), Raman spectroscopy, X-ray diffraction (XRD), X-ray photoelectron spectroscopy (XPS), and nitrogen porosimetry. This hybrid nanomaterial is found to improve the selectivity to NO 2 , compared to control graphene and WS 2 aerogels. The NO 2 sensing performance of the WS 2 /GA-based sensors is investigated under different relative humidities (0–60%), and ambient temperatures (room temperature (RT) to 180 °C). In all instances, the sensors exhibit p-type behavior. In dry atmosphere, faster response and better recovery are obtained with increasing temperature, reaching optimum sensing performance around 180 °C. At room temperature, interestingly, humidity is found helpful for enhancing the response and recovery of the sensor to NO 2 . Detection limits in the range of 10–15 ppb NO 2 were determined. A potential gas sensing mechanism for this composite aerogel is introduced.

36 MATERIALS SCIENCE↗

Limits on the evolutionary rates of biological traits

Abstract This paper focuses on the maximum speed at which biological evolution can occur. I derive inequalities that limit the rate of evolutionary processes driven by natural selection, mutations, or genetic drift. These rate limits link the variability in a population to evolutionary rates. In particular, high variances in the fitness of a population and of a quantitative trait allow for fast changes in the trait’s average. In contrast, low variability makes a trait less susceptible to random changes due to genetic drift. The results in this article generalize Fisher’s fundamental theorem of natural selection to dynamics that allow for mutations and genetic drift, via trade-off relations that constrain the evolutionary rates of arbitrary traits. The rate limits can be used to probe questions in various evolutionary biology and ecology settings. They apply, for instance, to trait dynamics within or across species or to the evolution of bacteria strains. They apply to any quantitative trait, e.g., from species’ weights to the lengths of DNA strands.

59 BASIC BIOLOGICAL SCIENCES↗

Limits on the Evolutionary Rates of Biological Traits

This paper focuses on the maximum speed at which biological evolution can occur. I derive inequalities that limit the rate of evolutionary processes driven by natural selection, mutations, or genetic drift. These rate limits link the variability in a population to evolutionary rates. In particular, high variances in the fitness of a population and of a quantitative trait allow for fast changes in the trait’s average. In contrast, low variability makes a trait less susceptible to random changes due to genetic drift. The results in this article generalize Fisher’s fundamental theorem of natural selection to dynamics that allow for mutations and genetic drift, via trade-of relations that constrain the evolutionary rates of arbitrary traits. The rate limits can be used to probe questions in various evolutionary biology and ecology settings. They apply, for instance, to trait dynamics within or across species or to the evolution of bacteria strains. They apply to any quantitative trait, e.g., from species’ weights to the lengths of DNA strands.

59 BASIC BIOLOGICAL SCIENCES↗

Detection of small drizzle droplets in a large cloud chamber using ultrahigh-resolution radar

Abstract. A large convection–cloud chamber has the potential to produce drizzle-sized droplets, thus offering a new opportunity to investigate aerosol–cloud–drizzle interactions at a fundamental level under controlled environmental conditions. One key measurement requirement is the development of methods to detect the low-concentration drizzle drops in such a large cloud chamber. In particular, remote sensing methods may overcome some limitations of in situ methods. Here, the potential of an ultrahigh-resolution radar to detect the radar return signal of a small drizzle droplet against the cloud droplet background signal is investigated. It is found that using a small sampling volume is critical to drizzle detection in a cloud chamber to allow a drizzle drop in the radar sampling volume to dominate over the background cloud droplet signal. For instance, a radar volume of 1 cubic centimeter (cm3) would enable the detection of drizzle embryos with diameter larger than 40 µm. However, the probability of drizzle sampling also decreases as the sample volume reduces, leading to a longer observation time. Thus, the selection of radar volume should consider both the signal power and the drizzle occurrence probability. Finally, observations from the Pi Convection–Cloud Chamber are used to demonstrate the single-drizzle-particle detection concept using small radar volume. The results presented in this study also suggest new applications of ultrahigh-resolution cloud radar for atmospheric sensing.

54 ENVIRONMENTAL SCIENCES↗

AI-enabled traveling wave protection for microgrids

Grid forming inverters provide voltage and frequency regulations for microgrids; in the meantime, new challenges are introduced for microgrid protections. For instance, inverters’ control strategies can affect protection behaviors, and low short-circuit ratios and bi-directional power flows also make protection operations complex. Protection schemes based on conventional principles such as overcurrent and distance relays do not always provide reliable, sensitive, or selective operations. Here, we devise a traveling wave protection approach for microgrids using a wavelet-driven deep neural network named WaveletKernelNet (WKN). Compared with conventional methods, the presented approach provides enhanced sensitivity, higher selectivity, and better identification of various faults in microgrids. Extensive case studies validate the efficacy and excellent performance of the devised approach.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

Fusion Neutron Generator

The proposed code, named FROG (Fusion neutron Generator) is built upon the open-source particle transport Monte Carlo toolkit Geant4. Geant4 provides C++ classes that can be leveraged to build application-specific codes dealing with the transport of particles through matter. Geant4-based codes are applied in high-energy particle physics experiments, medical applications, shielding, and space applications for example. The FROG code allows the user to define the geometry of a neutron converter device shaped as a hollow cylinder, where a neutron breeding material such as lithium deuteride (LiD) is cladded by two concentric cylinders. Such neutron converter is then placed inside a regular nuclear fission reactor, where thermal neutrons will react with the neutron breeder material (typically, Lithium 6), and through a series of reactions, will generate high-energy neutrons – neutrons whose kinetic energy are around 14 MeV. The hollowed central portion can hold a specimen that will be bombarded by high-energy neutrons created inside the neutron breeding material. Figuratively speaking, this type of device transforms neutrons from thermal (~0.625 eV) to fusion (~14 MeV) energies and is sometimes termed “fusion-to-thermal neutron converters” in the literature. The code consists of C++ source file compiled and linked to generate an executable. The user can select the dimensions of the converter (radius, length, and thickness of the breeder material), the breeder material type, the cladding material, and the specimen material that will be activated or irradiated. As input, the neutron flux for a specific location inside a reactor, for instance, positions in ATR, is required. As output, the code predicts the number of high-energy neutrons produced, the total neutron flux and fluence as well as its detailed spectrum. The physics involved in such device is very complex, as it requires modeling neutron transport, light-ion (tritons) transport, as well as fusion reactions. The Geant4 toolkit provides the required physical models.

Martin, NicholasP. [Idaho National Laboratory (INL↗