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The phylogeny and timescale of life are becoming better understood as the analysis of genomic data from model organisms continues to grow. As a result, discoveries are being made about the early history of life and the origin and development of complex multicellular life. This emerging comparative framework and the emphasis on historical patterns is helping to bridge barriers among organism-based research communities.
Meningococcal meningitis is a climate sensitive infectious disease. The regional extent of the Meningitis Belt in Africa, where the majority of epidemics occur, was originally defined by Lapeysonnie in the 1960s. A combination of climatic and environmental conditions and biological and social factors have been associated to the spatial and temporal patterns of epidemics observed since the disease first emerged in West Africa over a century ago. However, there is still a lack of knowledge and data that would allow disentangling the relative effects of the diverse risk factors upon epidemics. The Meningitis Environmental Risk Information Technologies Initiative (MERIT), a collaborative research-to-practice consortium, seeks to inform national and regional prevention and control strategies across the African Meningitis Belt through the provision of new data and tools that better determine risk factors. In particular MERIT seeks to consolidate a body of knowledge that provides evidence of the contribution of climatic and environmental factors to seasonal and year-to-year variations in meningococcal meningitis incidence at both district and national scales. Here we review recent research and practice seeking to provide useful information for the epidemic response strategy of National Ministries of Health in the Meningitis Belt of Africa. In particular the research and derived tools described in this paper have focused at "getting science into policy and practice" by engaging with practitioner communities under the umbrella of MERIT to ensure the relevance of their work to operational decision-making. We limit our focus to that of reactive vaccination for meningococcal meningitis. Important but external to our discussion is the development and implementation of the new conjugate vaccine, which specifically targets meningococcus A
Cavity flow resonance can cause numerous problems in aerospace applications. While our long-term goal is to understand cavity flows well enough to devise effective cavity resonance suppression techniques, this paper describes a fundamental study of resonant tones produced by jet-cavity interaction at subsonic and supersonic speeds. Our specific jet-cavity configuration can also be used as a test bed for evaluating active and passive flow resonance control concepts. Two significant findings emerge from this study. 1) Originally, we expected that tones produced by jet-cavity interaction would resemble cavity tones or jet tones or would involve some simple combinations of each. The experimental data do not support these expectations: instead, the jet cavity interaction produce a unique set of tones. We propose simple yet and physically insightful correlations for these tones. Although the pressure patterns on the cavity floor display very complex variations with the Mach number for a length/depth = 8 cavity, the tones correspond to the acoustic modes of the cavity-independent of flow. For a length/ depth = 3 cavity, however, a surprise emerges: the pressure patterns on the cavity floor are not so complex but the tones depend significantly on the flow. Additionally, we examine the role of external feedback unique to jet-cavity interaction. 2) Previous research led us to expect that traditional classifications (open, transitional, or closed) for cavities in an infinite flight stream would be insensitive to small changes in Mach number and would depend primarily on cavity length/depth ratios. Use of the novel high resolution photoluminescent pressure sensitive paint shows that the classifications are actually quite sensitive to jet Mach number for a length/depth = 8 cavity. However, these classifications provide no guidance whatsoever for tone amplitude or frequency. Detailed experimental data and insights presented here will assist researchers who are performing numerical simulations of jet-cavity flows as a first step toward devising resonance suppression methods.
In Marsilea quadrifolia, lateral roots arise from modified single cells of the endodermis located opposite the protoxylem poles within the meristematic region of the parent root. The initial cell divides in four specific planes to establish a five-celled lateral root primordium, with a tetrahedral apical cell in the centre and the oldest merophytes and the root cap along the sides. The cells of the merophyte divide in a precise pattern to give rise to the cells of the cortex, endodermis, pericycle, and vascular tissues of the emerging lateral root. Although the construction of the parent root is more complicated than that of lateral roots, patterns of cell division and tissue formation are similar in both types of roots, with the various tissues being arranged in similar positions in relation to the central axis. Vascular connection between the lateral root primordium and the parent root is derived from the pericycle cells lying between the former and the protoxylem members of the latter. It is proposed that the central axis of the root is not only a geometric centre, but also a physiological centre which determines the fate of the different cell types.
Far-infrared observations of the interstellar medium are reported by a balloon-borne telescope. With the 30-centimeter (12-in.) telescope operating at a wavelength of 100 microns, approximately forty new sources were observed in the galactic plane and in the large Magellanic Cloud. Patterns and some degree of understanding are beginning to emerge from the observations of objects in the far infrared.
BACKGROUND: Astronauts returning from the International Space Station are met by a team of recovery personnel typically providing physical assistance and medical support immediately upon landing. That is because long-duration spaceflight impacts astronauts' functional abilities. Future expeditions to planets or asteroids beyond the low Earth orbit, however, may require crewmembers to egress the vehicle and perform other types of physical tasks unassisted. It is therefore important to characterize the extent and longevity of functional deficits experienced by astronauts in order to design safe exploration class missions. Pilot Field Test (PFT) experiment conducted with participation of ISS crewmembers traveling on Soyuz expeditions 34S - 41S comprised several tasks designed to study the recovery of sensorimotor abilities of astronauts during the first 24 hours after landing and beyond. METHODS: The first test in the PFT battery sequence, and also the least demanding one from the sensorimotor perspective, was a Sit-to-Stand test. Test subjects were seated in the chair and had to stand up on command and remain standing for ten seconds. The subjects were instructed to stand up unassisted as quickly as they were able to, while maintaining postural control. Synchronized wireless inertial sensors mounted on the head, chest, lower back, wrists, and ankles were used to continuously log body kinematics. Crewmembers' blood pressure and heart rate were monitored and recorded with the Portapres and Polar systems. Each session was recorded with a digital video camera. During data collections occurring within the 24-hour postflight period, crewmembers were also asked to (1) evaluate their perceived motion sickness symptoms on a 20-point scale before and after completion of the test and (2) estimate how heavy they felt compared to their normal (preflight) body weight. Consent to participate in PFT was obtained from 18 crewmembers (11 US Orbital Segment [USOS] astronauts and 7 Russian cosmonauts). For 10 subjects, the first set of data was collected in the medical tent in Soyuz landing zone (1-2 hours after landing); the other 8 subjects were tested at the Kazakhstan deployment airport (4-5 hours after landing). 8 of the 11 astronauts were tested twice more within the first 24 hours postflight, at a refueling stop on the way to Houston (approximately 13 hours after landing) and at the Johnson Space Center (approximately 24 hours after landing). Later postflight data were collected in the first two weeks on some crewmembers. Finally, 6 astronauts were tested 60+ days after landing to establish a delayed baseline. RESULTS/DISCUSSION: Two of the 18 PFT participants felt too ill to attempt any tests in Kazakhstan (at either the landing zone or deployment airport). The remaining test subjects completed the Sit-to-Stand test and their reported motion sickness scores were unaffected by this task. The task completion times and body kinematics data analysis are currently underway. Preliminary analysis of astronaut data shows a steep improvement in the time to complete the task on the second data take, and in some cases, the trend continues through day six postflight. Head and trunk pitch angles and pitch rates were also examined and increases in all measures are evident throughout the observed recovery period (60+ days postflight). Interesting patterns of head and trunk pitch coordination have also emerged. One of the data analysis objectives is comparison of initial postflight performance and recovery of experienced crewmembers and first-time fliers. Another one - possible differences in performance between USOS and Russian crewmembers.
We have investigated laser-patterning and devitrification as a novel method to realize emergent properties in modified regions at the ribbon surface consisting of periodic localized laser spots thermally treated under rapid heating and cooling conditions. Fe-based amorphous ribbons were annealed for systematically varied laser power. Extremely high heating and cooling rates on the order of 10(exp 8)-10(exp 10)K/s have been estimated by finite element analysis simulations. Observations suggest surface melting followed by rapid solidification fast enough to quench and form an amorphous structure upon cooling. Diffusion of heat occurs from the laser irradiated surface region so that a finite volume of material surrounding this region rises in temperature above the crystallization temperature relevant for conventional isothermal annealing experiments. The underlying mechanism of laser annealing and consequences of heat transients involved are discussed in terms of impacts upon micro/nanostructure, residual stresses, and magnetic domain structure surrounding the laser irradiated region. The study illustrates the potential to exploit spatially optimized phase transformations in a scalable manufacturing process of amorphous and nanocrystalline alloys to locally access otherwise inaccessible extreme heating and cooling rates.
The simple primordium of the inner ear (otocyst) differentiates into many cell types, including sensory neurons and hair cells. We examined expression of the divergent homeobox transcription factor, cProx1, during otocyst development in chickens. Nuclear cProx1 protein is not evident in the otic placode but emerges in the otic cup by stage 12. At stage 16, cProx1-positive nuclei are scattered continuously throughout the neuroepithelium, from anteroventral to posteromedial. These labeled cells are neural precursors; they express betaIII-tubulin and migrate to the cochleovestibular ganglion between stages 13 and 21. By stage 18, two areas develop a dense pattern of cProx1 expression in which every nucleus is labeled. These areas emerge at the anterior and posterior extremes of the band of scattered cProx1 expression and express the sensory markers cSerrate1 and Cath1 by stage 23. Four discrete patches of dense cProx1 expression appear by stage 23 that correspond to the future superior crista, lateral crista, saccular macula, and posterior crista, as confirmed by immunolabeling for hair cell antigen (HCA) by stage 29. The remaining sensory epithelia display a dense pattern of cProx1 expression and label for HCA by stage 29. In the basilar papilla, nuclear cProx1 expression is down-regulated in most hair cells by stage 37 and in many supporting cells by stage 40. Our findings show that regions of the otocyst that give rise to neurons or hair cells are distinguished by their relative density of cProx1-positive nuclei, and suggest a role for cProx1 in the genesis of these cell types.
Videomagnetograph observations of the weak solar magnetic fields are discussed. Intranetwork (IN) elements are found to emerge in bipolar form, but to flow in a random pattern rather than toward the network elements. Merging of IN fields is found to be more important than the ephemeral regions as a source of new network elements. Arguments for and against the hypothesis that all solar fields are intrinsically strong are considered. It is noted that reconnection and merging of magnetic fields take place continually under the conditions presently examined.
The research program focuses on large-scale circulations and their interaction with the global convective pattern. An 11-year record of global cloud imagery and contemporaneous fields of motion and temperature have been used to investigate organized convection and coherent variability of the tropical circulation operating on intraseasonal time scales. This study provides a detailed portrait of tropical variability associated with the so-called Madden-Julian Oscillation (MJO). It reveals the nature, geographical distribution, and seasonality of discrete convective signal, which is a measure of feedback between the circulation and the convective pattern. That discrete spectral behavior has been evaluated in light of natural variability of the ITCZ associated with climatological convection. A composite signature of the MJO, based on cross-covariance statistics of cloud cover, motion, and temperature, has been constructed to characterize the lifecycle of the disturbance in terms of these properties. The composite behavior has also been used to investigate the influence the MJO exerts on the zonal-mean circulation and the involvement of the MJO in transfers of momentum between the atmosphere and the solid Earth. The aforementioned observational studies have led to the production of two animations. One reveals the convective signal in band-pass filtered OLR and compares it to climatological convection. The other is a 3-dimensional visualization of the composite lifecycle of the MJO. With a clear picture of the MJO in hand, feedback between the circulation and the convective pattern can be diagnosed meaningfully in numerical simulations. This process is being explored in calculations with the linearized primitive equations on the sphere in the presence of realistic stability and shear. The numerical framework represents climatological convection as a space-time stochastic process and wave-induced convection in terms of the vertically-integrated moisture flux convergence. In these calculations, frictional convergence near the equator emerges as a key to feedback between the circulation and the convective pattern. At low latitudes, nearly geostrophic balance in the boundary layer gives way to frictional balance. This shifts the wave-induced convection into phase with the temperature anomaly and allows the attending heating to feed back positively onto the circulation. The calculations successfully reproduce the salient features of the MJO. They are being used to understand the growth and decay phases of the composite lifecycle and the conditions that favor amplification of the MJO.
New foundational ideas are used to define a novel approach to generic visual pattern recognition. These ideas proceed from the starting point of the intrinsic equivalence of noise reduction and pattern recognition when noise reduction is taken to its theoretical limit of explicit matched filtering. This led us to think of the logical extension of sparse coding using basis function transforms for both de-noising and pattern recognition to the full pattern specificity of a lexicon of matched filter pattern templates. A key hypothesis is that such a lexicon can be constructed and is, in fact, a generic visual alphabet of spatial vision. Hence it provides a tractable solution for the design of a generic pattern recognition engine. Here we present the key scientific ideas, the basic design principles which emerge from these ideas, and a preliminary design of the Spatial Vision Tree (SVT). The latter is based upon a cryptographic approach whereby we measure a large aggregate estimate of the frequency of occurrence (FOO) for each pattern. These distributions are employed together with Hamming distance criteria to design a two-tier tree. Then using information theory, these same FOO distributions are used to define a precise method for pattern representation. Finally the experimental performance of the preliminary SVT on computer generated test images and complex natural images is assessed.
Discussion of the electroencephalogram as the critical measurement procedure for sleep research, and survey of major findings that have emerged in the last decade on the presence of sleep within the twenty-four-hour cycle. Specifically, intrasleep processes, frequency of stage changes, sequence of stage events, sleep stage amounts, temporal patterns of sleep, and stability of intrasleep pattern in both man and lower animals are reviewed, along with some circadian aspects of sleep, temporal factors, and number of sleep episodes. It is felt that it is particularly critical to take the presence of sleep into account whenever performance is considered. When it is recognized that responsive performance is extremely limited during sleep, it is easy to visualize the extent to which performance is controlled by sleep itself.
During the international campaign of June 1991, the active region AR 6659 produced six very large, long-duration flares (X10/12) during its passage across the solar disk. We present the characteristics of four of them (June 4, 6, 9, 15). Precise measurements of the spot motions from Debrecen and Tokyo white-light pictures are used to understand the fragmentation of the main sunspot group with time. This fragmentation leads to a continuous restructuring of the magnetic field pattern while rapid changes are evidenced due to fast new flux emergence (magnetograms of Marshall Space Flight Center (MSFC), Huairou). The first process leads to a shearing of the field lines along which there is energy storage; the second one is the trigger which causes the release of energy by creating a complex topology. We conjecture that these two processes with different time scales are relevant to the production of flares.
Improved optoelectronic patternrecognition encoders that measure rotary and linear 1-dimensional positions at conversion rates (numbers of readings per unit time) exceeding 20 kHz have been invented. Heretofore, optoelectronic pattern-recognition absoluteposition encoders have been limited to conversion rates <15 Hz -- too low for emerging industrial applications in which conversion rates ranging from 1 kHz to as much as 100 kHz are required. The high conversion rates of the improved encoders are made possible, in part, by use of vertically compressible or binnable (as described below) scale patterns in combination with modified readout sequences of the image sensors [charge-coupled devices (CCDs)] used to read the scale patterns. The modified readout sequences and the processing of the images thus read out are amenable to implementation by use of modern, high-speed, ultra-compact microprocessors and digital signal processors or field-programmable gate arrays. This combination of improvements makes it possible to greatly increase conversion rates through substantial reductions in all three components of conversion time: exposure time, image-readout time, and image-processing time.
Using the Caltech videomagnetograph, we obtained a 6.5-hr movie of the magnetic fields in a young active region. The major contribution to the short term magnetic evolution of the region was provided by many discrete magnetic points which move in apparently random directions with typical velocities of 0.4 - 1.0 km/sec. The majority of these features appear to be footpoints of new EFR's, which emerge at an observed rate of one to two per hour. The pattern of the motions suggests that the magnetic evolution of a growing region cannot be principally due to photospheric convective cells.
A survey of the approx. 1 MeV/nucleon heavy ion abundances in 66 He3-rich solar particle events was performed using the Max-Planck-Institut/University of Maryland and Goddard Space Flight Center instruments on the ISEE-3 spacecraft. The observations were carried out in interplanetary space over the period 1978 October through 1982 June. Earlier observations were confirmed which show an enrichment of heavy ions in HE3-rich events, relative to the average solar energetic particle composition in large particle events. For the survey near 1.5 MeV/nucleon the enrichments compared to large solar particle events are approximately He4:C:O:Ne:Mg:Si:Fe = 0.44:0.66:1.:3.4:3.5:4.1:9.6. Surprising new results emerging from the present broad survey are that the heavy ion enrichment pattern is the same within a factor of approx. 2 for almost all cases, and the degree of heavy ion enrichment is uncorrelated with the He3 enrichment. Overall, the features established appear to be best explained by an acceleration mechanism in which the He3 enrichment process is not responsible for the heavy ion enrichment, but rather the heavy ion enrichment is a measure of the ambient coronal composition at the sites where the He3-rich events occur.
A survey of the approx. 1 MeV/nucleon heavy ion abundances in 66 He-3-rich solar particle events was performed using the Max-Planck-Institut/University of Maryland and Goddard Space Flight Center instruments on the ISEE-3 spacecraft. The observations were carried out in interplanetary space over the period 1978 October through 1982 June. Earlier observations were confirmed which show an enrichment of heavy ions in He-3-rich events, relative to the average solar energetic particle composition in large particle events. For the survey near 1.5 MeV/nucleon the enrichments compared to large solar particle events are approximately He4:C:O:Ne:Mg:Si:Fe = 0.44:0.66:1.:3.4:3.5:4.1:9.6. Surprising new results emerging from the present broad survey are that the heavy ion enrichment pattern is the same within a factor of approx. 2 for almost all cases, and the degree of heavy ion enrichment is uncorrelated with the He-3 enrichment. Overall, the features established appear to be best explained by an acceleration mechanism in which the He-3 enrichment process is not responsible for the heavy ion enrichment, but rather the heavy ion enrichment is a measure of the ambient coronal composition at the sites where the He-3-rich events occur.
Bermuda is the site of two ocean time-series programs. At Hydrostation S, the ongoing biweekly profiles of temperature, salinity and oxygen now span 37 years. This is one of the longest open-ocean time-series data sets and provides a view of decadal scale variability in ocean processes. In 1988, the U.S. JGOFS Bermuda Atlantic Time-series Study began a wide range of measurements at a frequency of 14-18 cruises each year to understand temporal variability in ocean biogeochemistry. On each cruise, the data range from chemical analyses of discrete water samples to data from electronic packages of hydrographic and optics sensors. In addition, a range of biological and geochemical rate measurements are conducted that integrate over time-periods of minutes to days. This sampling strategy yields a reasonable resolution of the major seasonal patterns and of decadal scale variability. The Sargasso Sea also has a variety of episodic production events on scales of days to weeks and these are only poorly resolved. In addition, there is a substantial amount of mesoscale variability in this region and some of the perceived temporal patterns are caused by the intersection of the biweekly sampling with the natural spatial variability. In the Bermuda time-series programs, we have added a series of additional cruises to begin to assess these other sources of variation and their impacts on the interpretation of the main time-series record. However, the adequate resolution of higher frequency temporal patterns will probably require the introduction of new sampling strategies and some emerging technologies such as biogeochemical moorings and autonomous underwater vehicles.