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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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105 records · Page 6
All sourcesNASA NTRSDOE OSTI
DOE OSTI2022

SourceFinder: a Machine-Learning-Based Tool for Identification of Chromosomal, Plasmid, and Bacteriophage Sequences from Assemblies

High-throughput genome sequencing technologies enable the investigation of complex genetic interactions, including the horizontal gene transfer of plasmids and bacteriophages. However, identifying these elements from assembled reads remains challenging due to genome sequence plasticity and the difficulty in assembling complete sequences. In this study, we developed a classifier, using random forest, to identify whether sequences originated from bacterial chromosomes, plasmids, or bacteriophages. The classifier was trained on a diverse collection of 23,211 chromosomal, plasmid, and bacteriophage sequences from hundreds of bacterial species. In order to adapt the classifier to incomplete sequences, each complete sequence was subsampled into 5,000 nucleotide fragments and further subdivided into k-mers. This three-class classifier succeeded in identifying chromosomes, plasmids, and bacteriophages using k-mer distributions of complete and partial genome sequences, including simulated metagenomic scaffolds with minimum performance of 0.939 area under the receiver operating characteristic curve (AUC). This classifier, implemented as SourceFinder, has been made available as an online web service to help the community with predicting the chromosomal, plasmid, and bacteriophage sources of assembled bacterial sequence data (https://cge.food.dtu.dk/services/SourceFinder/).

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2025

"Hidden" hydrothermal technical potential & technoeconomics: Revealing permeability & fluids with more data

Historical hydrothermal estimates have largely relied on temperature or heat flow estimates ignoring the need for natural flowing fluids. More accurate hydrothermal estimates require some indication of permeability and fluids that naturally exist in the subsurface. This paper describes a novel approach that includes proxies of permeability and fluids in hydrothermal estimates by leveraging the relatively data-rich Great Basin. Specifically, nameplate capacities (megawatts) of operating geothermal plants, negative (0 megawatt) locations and 48 geophysical and geologic features are used to used in eXtreme Gradient Boosting (XGBoost) regression to make hydrothermal capacity predictions. Additionally, this work inputs the XGBoost-based hydrothermal predictions into the Renewable Energy Potential (reV) model to quantify technical capacity, its uncertainty and techno-economics. Compared to historical hydrothermal estimates, these predictions adhere to the 37 operating geothermal plants and negative locations. We present a method for subsampling the negative sites to bring the labels into balance that uses the geologic domain knowledge to proportionally represent negatives. Overall, the distributions of the hydrothermal technical capacity and the site levelized cost of energy are respectively much tighter, lower and more accurate than the previous estimates for the Great Basin, as they include geological and geophysical surrogates for permeability and fluids. Percentile (50th and 90th, median and high estimate, respectively) models provide bookends for these metrics.

13 HYDRO ENERGY↗
DOE OSTI2024

The SRG/eROSITA All-Sky Survey: Optical identification and properties of galaxy clusters and groups in the western galactic hemisphere

The first SRG/eROSITA All-Sky Survey (eRASS1) provides the largest intracluster medium-selected galaxy cluster and group catalog covering the western Galactic hemisphere. Compared to samples selected purely on X-ray extent, the sample purity can be enhanced by identifying cluster candidates using optical and near-infrared data from the DESI Legacy Imaging Surveys. Using the red-sequence-based cluster findereROMaPPer, we measured individual photometric properties (redshiftz λ , richnessλ, optical center, and BCG position) for 12000 eRASS1 clusters over a sky area of 13 116 deg 2 , augmented by 247 cases identified by matching the candidates with known clusters from the literature. The median redshift of the identified eRASS1 sample isz= 0.31, with 10% of the clusters atz> 0.72. The photometric redshifts have an accuracy ofδz/(1 +z) ≲ 0.005 for 0.05 specand velocity dispersionσ) were measured a posteriori for a subsample of 3210 and 1499 eRASS1 clusters, respectively, using an extensive compilation of spectroscopic redshifts of galaxies from the literature. We infer that the primary eRASS1 sample has a purity of 86% and optical completeness >95% forz> 0.05. For these and further quality assessments of the eRASS1 identified catalog, we applied our identification method to a collection of galaxy cluster catalogs in the literature, as well as blindly on the full Legacy Surveys covering 24069 deg 2 . Using a combination of these cluster samples, we investigated the velocity dispersion-richness relation, finding that it scales with richness as log(λ norm ) = 2.401 × log(σ) − 5.074 with an intrinsic scatter ofδ in = 0.10 ± 0.01 dex. The primary product of our work is the identified eRASS1 cluster catalog with high purity and a well-defined X-ray selection process, opening the path for precise cosmological analyses presented in companion papers.

Astronomy & Astrophysics↗
DOE OSTI2023

Testing AGN outflow and accretion models with C IV and He II emission line demographics in z ≈ 2 quasars

Using ≈190 000 spectra from the 17th data release of the Sloan Digital Sky Survey (SDSS), we investigate the ultraviolet emission line properties in z ≈ 2 quasars. Specifically, we quantify how the shape of C IV λ1549 and the equivalent width (EW) of He II λ1640 depend on the black hole mass and Eddington ratio inferred from Mg II λ2800. Above L/L Edd ≳ 0.2, there is a strong mass dependence in both C IV blueshift and He II EW. Large C IV blueshifts are observed only in regions with both high mass and high accretion rate. Including X-ray measurements for a subsample of 5000 objects, we interpret our observations in the context of AGN accretion and outflow mechanisms. The observed trends in He II and 2 keV strength are broadly consistent with theoretical qsosed models of AGN spectral energy distributions (SEDs) for low spin black holes, where the ionizing SED depends on the accretion disc temperature and the strength of the soft excess. High spin models are not consistent with observations, suggesting SDSS quasars at z ≈ 2 may in general have low spins. We find a dramatic switch in behaviour at L/L Edd ≲ 0.1: the ultraviolet emission properties show much weaker trends, and no longer agree with qsosed predictions, hinting at changes in the structure of the broad line region. Overall, the observed emission line trends are generally consistent with predictions for radiation line driving where quasar outflows are governed by the SED, which itself results from the accretion flow and hence depends on both the SMBH mass and accretion rate.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2022

The Global Structure of the Milky Way’s Stellar Halo Based on the Orbits of Local Metal-poor Stars

We analyze the global structure of the Milky Way (MW)'s stellar halo, including its dominant subcomponent, Gaia-Sausage-Enceladus (GSE). The method for reconstructing the global distribution of this old stellar component is to employ the superposition of the orbits covering the large MW's space, where each of the orbit-weighting factors is assigned following the probability that the star is located at its currently observed position. The selected local, metal-poor sample with [Fe/H] <–1, using Gaia Early Data Release 3 and Sloan Digital Sky Survey Data Release 16, shows that the global shape of the halo is systematically rounder at all radii in more metal-poor ranges, such that an axial ratio, q, is nearly 1 for [Fe/H] <–2.2 and ~0.7 for –1.4 < [Fe/H] < –1.0. It is also found that a halo in the relatively metal-rich range of [Fe/H] >–1.8 actually shows a boxy/peanut-like shape, suggesting a major merger event. The distribution of azimuthal velocities shows a disk-like flattened structure at –1.4 < [Fe/H] < –1.0, which is thought to be the metal-weak thick disk. For the subsample of stars showing GSE-like kinematics, at [Fe/H] >–1.8, its global density distribution has an axis ratio of 0.9, which is more spherical than the general halo sample, and an outer ridge at r ~ 20 kpc. This spherical shape is consistent with the features of accreted halo components, and the ridge suggests that the orbit of GSE's progenitor had an apocenter of ~20 kpc. Implications for the formation of the stellar halo are also presented.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2022

Dark Energy Survey Year 3 results: marginalization over redshift distribution uncertainties using ranking of discrete realizations

ABSTRACT Cosmological information from weak lensing surveys is maximized by sorting source galaxies into tomographic redshift subsamples. Any uncertainties on these redshift distributions must be correctly propagated into the cosmological results. We present hyperrank, a new method for marginalizing over redshift distribution uncertainties, using discrete samples from the space of all possible redshift distributions, improving over simple parametrized models. In hyperrank, the set of proposed redshift distributions is ranked according to a small (between one and four) number of summary values, which are then sampled, along with other nuisance parameters and cosmological parameters in the Monte Carlo chain used for inference. This approach can be regarded as a general method for marginalizing over discrete realizations of data vector variation with nuisance parameters, which can consequently be sampled separately from the main parameters of interest, allowing for increased computational efficiency. We focus on the case of weak lensing cosmic shear analyses and demonstrate our method using simulations made for the Dark Energy Survey (DES). We show that the method can correctly and efficiently marginalize over a wide range of models for the redshift distribution uncertainty. Finally, we compare hyperrank to the common mean-shifting method of marginalizing over redshift uncertainty, validating that this simpler model is sufficient for use in the DES Year 3 cosmology results presented in companion papers.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2021

Core Characterization of Bakken Shale from the Bedwell 33-52-1-1H Well, Sheridan County, Montana

The computed tomography (CT) facilities and the Multi-Sensor Core Logger (MSCL) at the National Energy Technology Laboratory (NETL) in Morgantown, West Virginia were used to characterize core of the Bedwell 33-52-1-1H well (API 25-091-21920), a wildcat field in Sheridan County, Montana. The primary impetus of this work is to provide a unique dataset to researchers at universities, national laboratories, geological surveys, and other locations for additional analyses. The resultant datasets are presented in this report and can be accessed from NETL's Energy Data eXchange (EDX) online system using the following link: https://edx.netl.doe.gov/dataset/bedwell-33-52-1-1h-well. The equipment and techniques used to characterize the full core were non-destructive, enabling future examinations and analyses to be performed on these cores. However, none of the equipment used was suitable for direct visualization of the pore space in fine-grained structures such as those found in shales; fractures, discontinuities, and millimeter scale features were readily detectable with the methods tested. Imaging with the NETL medical CT scanner was performed on the entire core. Qualitative analysis of the medical CT images, coupled with X-ray fluorescence (XRF), P-wave, and magnetic susceptibility measurements from the MSCL were useful in identifying zones of interest for more detailed analysis. A selection of samples (Table 1) were cored, sliced, and powdered for additional characterization analyses. These analyses did involve destructive subsampling of the full core at discrete sections, and the results are presented here in the context of the larger core description. Selected sections of the core were removed from the full core for detailed analyses using the following destructive techniques: bulk inductively coupled plasma-optical emission spectroscopy (ICP-OES), isolation of carbon and sulfur, Fourier transform infrared (FTIR) spectroscopy, scanning electron microscopy (SEM), and higher resolution CT scan with NETL’s micro-CT scanning systems. The ability to quickly identify key areas for more detailed study with higher resolution will save time and resources in future studies. The combination of methods used provides a multi-scale analysis of the core; the resulting macro and micro descriptions are relevant to many subsurface energy related examinations traditionally performed at NETL.

04 OIL SHALES AND TAR SANDS↗
DOE OSTI2021

Physical, resource supply, and biological controls on nutrient processing along the river continuum

Nutrient impairment has led to damages to US surface and groundwater systems in excess of 100 billion dollars per year. Therefore, there is a strong need to develop methods to predict the transport, uptake, and export of nutrients along fluvial networks. We present results that are based on a data-driven mechanistic understanding of three factors that largely control nutrient uptake and export: 1) interactions between transport-related processes (mass transfer to metabolically active zones), 2) resource supply dynamics (nutrient concentration, stoichiometric constraints, etc.), and 3) biological controls (microbial community structure and function). Our results were generated from column experiments conducted along the Jemez River-Rio Grande continuum, which spans four orders of magnitude in mean annual discharge, more than 2000 m in altitude, and more than 500 km of stream longitude. Two resource supply injections were performed on each of the columns, i.e., a nitrate only addition, followed by a stoichiometrically ‘balanced’ 106Carbon:16Nitrogen:1Phosphorus addition. We quantified NO3-N uptake kinetics while constraining three variables: stream order, sediment type and type of injection (N vs stoichiometrically ‘balanced’ C:N:P). Following the laboratory nutrient uptake experiments, the columns were destructively sampled and the contents were homogenized to collect subsamples for DNA sequencing. Amplicon analysis was carried out as described by the Earth Microbiome Protocol for 16s and ITS sequencing.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2021

Ground Vibrational State SiO Emission in the VLA BAaDE Survey

Using a subsample of the Bulge Asymmetries and Dynamical Evolution (BAaDE) survey of stellar SiO masers, we explore the prevalence and characteristics of {sup 28}SiO J = 1 − 0, v = 0 emission. We identify 90 detections of maser, thermal, or composite {sup 28}SiO J = 1 − 0, v = 0 emission out of approximately 13,000 candidate spectra from the National Science Foundation’s Karl G. Jansky Very Large Array (VLA). We find that the detected sources are likely asymptotic giant branch stars belonging to a bright, foreground Milky Way stellar disk population. For the 32 sources showing thermal components, we extract values for outflow velocity by fitting thermal line profiles. We find a range of circumstellar envelope expansion velocities, and compare to previously recorded OH and CO expansion velocities. This preliminary survey is already the largest study of stellar ground vibrational state SiO masers to date, and will be expanded to include the entire VLA BAaDE data set when data reduction for the 18,988 target sources is completed.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2021

Connecting Galactic Outflows and Star Formation: Inferences from Hα Maps and Absorption-line Spectroscopy at 1 ≲ z ≲ 1.5

We investigate the connection between galactic outflows and star formation using two independent data sets covering a sample of 22 galaxies between 1 ≲ z ≲ 1.5. The Hubble Space Telescope WFC3/G141 grism provides low spectral resolution, high spatial resolution spectroscopy yielding Hα emission-line maps from which we measure the spatial extent and strength of star formation. In the rest-frame near-UV, Keck/DEIMOS observes Fe ii and Mg ii interstellar absorption lines, which provide constraints on the intensity and velocity of the outflows. We compare outflow properties from individual and composite spectra with the star formation rate (SFR) and SFR surface density (Σ{sub SFR}), as well as the stellar mass and specific SFR (sSFR). The Fe ii and Mg ii equivalent widths (EWs) increase with both SFR and Σ{sub SFR} at ≳3σ significance, while the composite spectra show larger Fe ii EWs and outflow velocities in galaxies with higher SFR, Σ{sub SFR}, and sSFR. Absorption-line profiles of the composite spectra further indicate that the differences between subsamples are driven by outflows rather than the interstellar medium. While these results are consistent with those of previous studies, the use of Hα images makes them the most direct test of the relationship between star formation and outflows at z > 1 to date. Future facilities such as the James Webb Space Telescope and the upcoming Extremely Large Telescopes will extend these direct, Hα-based studies to lower masses and SFRs, probing galactic feedback across orders of magnitude in galaxy properties and augmenting the correlations we find here.

47 OTHER INSTRUMENTATION↗
DOE OSTI2022

Dark Energy Survey Year 3 results: Measurement of the baryon acoustic oscillations with three-dimensional clustering

The three-dimensional correlation function offers an effective way to summarize the correlation of the large-scale structure even for imaging galaxy surveys. We have applied the projected three-dimensional correlation function, ξ p to measure the baryonic acoustic oscillations (BAO) scale on the first-three years Dark Energy Survey data. The sample consists of about 7 million galaxies in the redshift range 0.6< z p < 1.1 over a footprint of 4108 deg 2 . Our theory modeling includes the impact of realistic true redshift distributions beyond Gaussian photo-z approximation. ξ p is obtained by projecting the three-dimensional correlation to the transverse direction. To increase the signal-to-noise of the measurements, we have considered a Gaussian stacking window function in place of the commonly used top-hat. ξ p is sensitive to D M (z eff )/r s , the ratio between the comoving angular diameter distance and the sound horizon. Using the full sample, D M (z eff )/r s is constrained to be19.00 ± 0.67 (top-hat) and 19.15 ± 0.58 (Gaussian) at z eff = 0.835. The constraint is weaker than the angular correlation w constraint 18.84 ± 0.50), and we trace this to the fact that the BAO signals are heterogeneous across redshift. While ξ p responds to the heterogeneous signals by enlarging the error bar, w can still give a tight bound on D M s in this case. When a homogeneous BAO-signal subsample in the range 0.7 < z p <1.0 (z eff = 0.845) is considered, ξp yields 19.80 ± 0.67 (top-hat) and 19.84 ± 0.53 (Gaussian). The latter is mildly stronger than the w constraint (19.86 ± 0.55). We find that the ξ p results are more sensitive to photo-z because ξ p keeps the three-dimensional clustering information causing it to be more prone to photo-z noise. The Gaussian window gives more robust results than the top-hat as the former is designed to suppress the low signal modes. ξ p and the angular statistics such as w have their own pros and cons, and they serve an important crosscheck with each other.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2022

Efficient analysis routines for single and double peaked Type 2 AGN spectra

Driven by the imminent need to rapidly process and classify millions of AGN spectra drawn from next generation astronomical facilities, we present a spectral fitting routine for Type 2 AGN spectra optimized for high volume processing, using the quasar spectral fitting library (qsfit). We analyse an optically selected sample of 813 luminous Type 2 AGN spectra at z < 0.83 from the Sloan Digital Sky Survey (SDSS) to qualify its performance. We report a median narrow line H α/H β Balmer decrement of 4.5 ± 0.8, alluding to the presence of dust in the narrow line region (NLR). We publish a specialized QSFIT fitting routine for high signal-to-noise ratio spectra and general fitting routine for double peaked Type 2 AGN spectra applied on a subsample of 45 spectra from our parent sample. We report a median red and blue peak velocity separation of 390 ± 60 kms −1 . No trend is found for red or blue peaks to exhibit systematically different luminosity or ionization properties. Emission line diagnostics show that the double peaks in all sources are illuminated by an AGN-powered ionizing continuum. Finally, we examine the morphology of host galaxies of our double peaked sample. We find double peaked Type 2 AGN reside in merging systems at a comparable frequency to single peaked AGN. This suggests that the double peaked AGN phenomenon is likely to have a bi-conical outflow origin in the majority of cases. We publicly release the code used for spectral analysis and produced catalogues used in this work.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2022

Optimizing the shape of photometric redshift distributions with clustering cross-correlations

We present an optimization method for the assignment of photometric galaxies to a chosen set of redshift bins. This is achieved by combining simulated annealing, an optimization algorithm inspired by solid-state physics, with an unsupervised machine learning method, a self-organizing map (SOM) of the observed colours of galaxies. Starting with a sample of galaxies that is divided into redshift bins based on a photometric redshift point estimate, the simulated annealing algorithm repeatedly reassigns SOM-selected subsamples of galaxies, which are close in colour, to alternative redshift bins. We optimize the clustering cross-correlation signal between photometric galaxies and a reference sample of galaxies with well-calibrated redshifts. Depending on the effect on the clustering signal, the reassignment is either accepted or rejected. By dynamically increasing the resolution of the SOM, the algorithm eventually converges to a solution that minimizes the number of mismatched galaxies in each tomographic redshift bin and thus improves the compactness of their corresponding redshift distribution. This method is demonstrated on the synthetic Legacy Survey of Space and Time cosmoDC2 catalogue. We find a significant decrease in the fraction of catastrophic outliers in the redshift distribution in all tomographic bins, most notably in the highest redshift bin with a decrease in the outlier fraction from 57 percent to 16 percent.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2024

The SRG/eROSITA All-Sky Survey: Exploring halo assembly bias with X-ray-selected superclusters

Numerical simulations indicate that the clustering of dark matter halos is not only dependent on the halo masses but has a secondary dependence on other properties, such as the assembly history of the halo. This phenomenon, known as the halo assembly bias (HAB), has been found mostly on galaxy scales; observational evidence on larger scales is scarce. In this work, we propose a novel method for exploring HAB on cluster scales using large samples of superclusters. Leveraging the largest-ever X-ray galaxy cluster and supercluster samples obtained from the first SRG/eROSITA all-sky survey, we constructed two subsamples of galaxy clusters that consist of supercluster members and isolated clusters, respectively. After correcting for the selection effects on redshift, mass, and survey depth, we computed the excess in the concentration of the intracluster gas of isolated clusters with respect to supercluster members, defined as δc gas ≡ c gas , ISO /c gas , SC –1 , to investigate the environmental effect on the concentration of clusters, a sign of HAB on cluster scales. We find that the average gas mass concentration of isolated clusters is a few percent higher than that of supercluster members, with a maximum significance of 2.8σ. The result for δc gas varies with the overdensity ratio, f, in supercluster identification, cluster mass proxies, and mass and redshift ranges but remains positive in almost all the measurements. We measure slightly larger δc gas when adopting a higher f for supercluster identification. The δc gas is also higher for low-mass and low-redshift clusters. We performed weak lensing analyses to compare the total mass concentration of the two classes and find a similar trend in total mass concentration as obtained from the gas mass concentration. Our results are consistent with the prediction of HAB on cluster scales, where halos located in denser environments are less concentrated; this trend is stronger for halos with lower masses and at lower redshifts. These phenomena can be explained by the fact that clusters in denser environments, such as superclusters, have experienced more mergers than isolated clusters in their assembling history. This work paves the way to explore HAB with X-ray superclusters and demonstrates that large samples of superclusters with X-ray and weak-lensing data can advance our understanding of the evolution of the large-scale structure.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2022

The eROSITA Final Equatorial-Depth Survey (eFEDS)

In 2019, the eROSITA telescope on board the Russian-German satellite Spectrum-Roentgen-Gamma (SRG) began to perform a deep all-sky X-ray survey with the aim of identifying ~100 000 clusters and groups over the course of four years. As part of its performance verification phase, a ~140 deg 2 survey, called eROSITA Final Equatorial-Depth Survey (eFEDS), was performed. With a depth typical of the all-sky survey after four years, it allows tests of tools and methods as well as improved predictions for the all-sky survey. As part of this effort, a catalog of 542 X-ray selected galaxy group and cluster candidates was compiled. Here, in this paper, we present the optical follow-up, with the aim of providing redshifts and cluster confirmation for the full sample. Furthermore, we aim to provide additional information on the dynamical state, richness, and optical center of the clusters. Finally, we aim to evaluate the impact of optical cluster confirmation on the purity and completeness of the X-ray selected sample. We used optical imaging data from the Hyper Suprime-Cam Subaru Strategic Program and from the Legacy Survey to identify optical counterparts to the X-ray detected cluster candidates. We make use of the multi-component matched filter cluster confirmation tool (MCMF), as well as of the optical cluster finder CAMIRA to derive cluster redshifts and richnesses. MCMF provided the probabilities with which an optical structure would be a chance superposition with the X-ray candidate. These probabilities were used to identify the best optical counterpart as well as to confirm an X-ray candidate as a cluster. The impact of this confirmation process on catalog purity and completeness was estimated using optical to X-ray scaling relations as well as simulations. The resulting catalog was furthermore matched with public group and cluster catalogs. Optical estimators of the cluster dynamical state were constructed based on density maps of the red-sequence galaxies at the cluster redshift. By providing redshift estimates for all 542 candidates, we construct an optically confirmed sample of 477 clusters and groups with a residual contamination of 6%. Of these, 470 (98.5%) are confirmed using MCMF, and 7 systems are added through cross-matching with spectroscopic group catalogs. Using observable-to-observable scaling and the applied confirmation threshold, we predict that 8 ± 2 real systems have been excluded with the MCMF cut required to build this low-contamination sample. This number agrees well with the 7 systems found through cross-matching that were not confirmed with MCMF. The predicted redshift and mass distribution of this catalog agree well with simulations. Thus, we expect that these 477 systems include >99% of all true clusters in the candidate list. Using an MCMF-independent method, we confirm that the catalog contamination of the confirmed subsample is 6 ± 3%. Application of the same method to the full candidate list yields 17 ± 3%, consistent with estimates coming from the fraction of confirmed systems of ~17% and with expectations from simulations of ~20%. We also present a sample of merging cluster candidates based on the derived estimators of the cluster dynamical state.

79 ASTRONOMY AND ASTROPHYSICS↗