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At least 109 records · Page 6

Resolving Lonsdaleite's decade-long controversy: Atomistic insights into a metastable diamond polymorph

Lonsdaleite, a theoretically proposed hexagonal diamond polymorph, has remained at the center of a five-decade scientific controversy since its 1967 identification. While some studies claim it exhibits superior hardness through compression-induced structural changes, others contend it is merely a stacking-faulted cubic diamond. Meteoritic samples and synthetic preparations have yielded conflicting evidence, with even advanced characterisation techniques like XRD and TEM failing to provide definitive proof. In this work, we employ first-principles density functional theory (DFT) and molecular dynamics (MD) simulations to generate unambiguous theoretical fingerprints through XRD, Raman, and SAED patterns that distinguish true Lonsdaleite from cubic diamond and its defective variants. Our atomistic approach quantifies the thermodynamic metastability of Lonsdaleite under realistic pressure-temperature conditions, reveals distinct spectral signatures through simulated Raman and resolves the structural ambiguity through generalised stacking fault energy analysis. By establishing clear criteria for definitive identification, this study provides long-awaited clarity to the Lonsdaleite debate while offering a robust computational framework for characterising metastable carbon phases in meteoritic, synthetic and industrial materials.

DFT↗

Complementing Dynamical Downscaling With Super‐Resolution Convolutional Neural Networks

Despite advancements in Artificial Intelligence (AI) methods for climate downscaling, significant challenges remain for their practicality in climate research. Current AI-methods exhibit notable limitations, such as limited application in downscaling Global Climate Models (GCMs), and accurately representing extremes. To address these challenges, we implement an AI-based methodology using super-resolution convolutional neural networks (SRCNN), trained and evaluated on 40 years of daily precipitation data from a reanalysis and a high-resolution dynamically downscaled counterpart. The dynamical downscaled simulations, constrained using spectral nudging, enable the replication of historical events at a higher resolution. This allows the SRCNN to emulate dynamical downscaling effectively. Modifications, such as incorporating elevation data and data pre-processing enhances overall model performance, while using exponential and quantile loss functions improve the simulation of extremes. Our findings show SRCNN models efficiently and skillfully downscale precipitation from GCMs. Future work will expand this methodology to downscale additional variables for future climate projections.

54 ENVIRONMENTAL SCIENCES↗

Towards Ab-Initio Simulations of Crystalline Defects at the Exascale Using Spectral Quadrature Density Functional Theory

Defects in crystalline solids play a crucial role in determining properties of materials at the nano, meso- and macroscales, such as the coalescence of vacancies at the nanoscale to form voids and prismatic dislocation loops or diffusion and segregation of solutes to nucleate precipitates, phase transitions in magnetic materials via disorder and doping. First principles Density Functional Theory (DFT) simulations can provide a detailed understanding of these phenomena. However, the number of atoms needed to correctly simulate these systems is often beyond the reach of many widely used DFT codes. The aim of this article is to discuss recent advances in first principles modeling of crystal defects using the spectral quadrature method. The spectral quadrature method is linear scaling with respect to the number of atoms, permits spatial coarse-graining, and is capable of simulating non-periodic systems embedded in a bulk environment, which allows the application of appropriate boundary conditions for simulations of crystalline defects. In this article, we discuss the state-of-the-art in ab-initio modeling of large metallic systems of the order of several thousand atoms that are suitable for utilizing exascale computing resourses.

36 MATERIALS SCIENCE↗

Recent advances and applications of deep learning methods in materials science

Deep learning (DL) is one of the fastest-growing topics in materials data science, with rapidly emerging applications spanning atomistic, image-based, spectral, and textual data modalities. DL allows analysis of unstructured data and automated identification of features. The recent development of large materials databases has fueled the application of DL methods in atomistic prediction in particular. In contrast, advances in image and spectral data have largely leveraged synthetic data enabled by high-quality forward models as well as by generative unsupervised DL methods. In this article, we present a high-level overview of deep learning methods followed by a detailed discussion of recent developments of deep learning in atomistic simulation, materials imaging, spectral analysis, and natural language processing. For each modality we discuss applications involving both theoretical and experimental data, typical modeling approaches with their strengths and limitations, and relevant publicly available software and datasets. We conclude the review with a discussion of recent cross-cutting work related to uncertainty quantification in this field and a brief perspective on limitations, challenges, and potential growth areas for DL methods in materials science.

36 MATERIALS SCIENCE↗

Spectral Effects in Albedo and Rearside Irradiance Measurment for Bifacial Performance Estimation: Preprint

Albedo data are essential for accurate prediction of bifacial PV module performance. However, spectral response mismatch between PV modules and irradiance sensors used in albedometers can limit the accuracy of performance predictions. In order to provide quantitative assessment of this effect, we investigate via simulation the differences in spectrally responsive albedo measured with thermopile pyranometers and crystallinesilicon PV reference cells in comparison to a representative crystalline-silicon bifacial PV module for nine different representative ground surface materials. Calculations are performed using simulated solar spectra together with catalogued spectral reflectivity data distributed with the SMARTS simulation software. For the specific materials considered, the results show that albedo measurement using thermopile pyranometers could over or under-estimate the ground-reflected radiation usable by a bifacial PV module by up to 10%, versus only approximately 4% total range of variation for a PV reference cell.

Albedo↗

Fully compressible simulations of waves and core convection in main-sequence stars

Context: Recent, nonlinear simulations of wave generation and propagation in full-star models have been carried out in the anelastic approximation using spectral methods. Although it makes long time steps possible, this approach excludes the physics of sound waves completely and requires rather high artificial viscosity and thermal diffusivity for numerical stability. A direct comparison with observations is thus limited. Aims: In this study, we explore the capabilities of our compressible multidimensional Seven-League Hydro (SLH) code to simulate stellar oscillations. Methods: We compare some fundamental properties of internal gravity and pressure waves in 2D SLH simulations to linear wave theory using two test cases: (1) an interval gravity wave packet in the Boussinesq limit and (2) a realistic 3 M ⊙ stellar model with a convective core and a radiative envelope. Oscillation properties of the stellar model are also discussed in the context of observations. Results: Our tests show that specialized low-Mach techniques are necessary when simulating oscillations in stellar interiors. Basic properties of internal gravity and pressure waves in our simulations are in good agreement with linear wave theory. As compared to anelastic simulations of the same stellar model, we can follow internal gravity waves of much lower frequencies. The temporal frequency spectra of velocity and temperature are flat and compatible with the observed spectra of massive stars. Conclusion: The low-Mach compressible approach to hydrodynamical simulations of stellar oscillations is promising. Our simulations are less dissipative and require less luminosity boosting than comparable spectral simulations. The fully-compressible approach allows for the coupling of gravity and pressure waves in the outer convective envelopes of evolved stars to be studied in the future.

79 ASTRONOMY AND ASTROPHYSICS↗

Direct Numerical Simulation of Flow Over a Wall-Mounted Cube with the Nek5000 Spectral Element Code: DNS at Re h = 3900

The direct numerical simulation (DNS) of the canonical wall-mounted unit cube subjected to two distinct incident velocity profiles is performed at a Reynolds number where the bulk flow characteristics are known to become relatively Reynolds number insensitive. The aim of this work is to highlight the sensitivity of such bluff-body flows to mean shear and to provide a representative set of data for such flow scenarios where common turbulence modeling techniques often fail. Simple boundary conditions and a small domain are selected to allow for cost-effective and easy comparisons for model development purposes. In addition to mean velocity profiles, select turbulence statistics are presented in detail. Further, the basic efficacy of eddy viscosity models is evaluated and found to be adequate only for the shear stress components for the bluff-body flows examined here. Other failure mechanisms for RANS are proposed.

42 ENGINEERING↗

Experimental characterization and atomistic simulation of grain boundary segregation in Mg-Y alloys

As a rare earth solute element in Mg alloys, Y has the beneficial effects of increasing both the strength and the ductility as well as weakening the crystallographic texture. To achieve a more fundamental understanding on how Y addition affects the microstructural evolution and mechanical properties, the Y segregation behavior at grain boundaries was investigated in Mg-1wt.%Y and Mg-7wt.%Y alloys at different conditions. The segregation intensity and its dependence on the grain boundary misorientation angle were experimentally characterized and computationally predicted. Strong segregation at grain boundaries was observed in both low and high Y-containing alloys. Y segregation was found to remain in alloy Mg-7Y after high-temperature annealing heat treatment at 540 °C. No direct correlation between the Y segregation intensity and the grain boundary misorientation angle could be established based on either the experimental characterization or the atomistic simulation with a spectral model. We thus conclude that grain boundary segregation of Y is independent of grain boundary misorientation angle.

Grain boundary↗

A parametrically programmable delay line for microwave photons

Delay lines that store quantum information are crucial for advancing quantum repeaters and hardware efficient quantum computers. Traditionally, they are realized as extended systems that support wave propagation but provide limited control over the propagating fields. Here, we introduce a parametrically addressed delay line for microwave photons that provides a high level of control over the stored pulses. By parametrically driving a three-wave mixing circuit element that is weakly hybridized with an ensemble of resonators, we engineer a spectral response that simulates that of a physical delay line, while providing fast control over the delay line’s properties. We demonstrate this novel degree of control by choosing which photon echo to emit, translating pulses in time, and even swapping two pulses, all with pulse energies on the order of a single photon. We also measure the noise added from our parametric interactions and find it is much less than one photon.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Machine learning inversion of interatomic force constants from single-crystal inelastic neutron scattering

Atomic vibrations govern many macroscopic properties of materials, but experiments to comprehensively probe them remain challenging. Inelastic neutron scattering (INS) is a powerful technique to map phonon dispersions in crystals, especially when leveraging modern time-of-flight (ToF) spectrometers with large detectors. However, efficiently and robustly extracting interatomic force constants (FCs) parameterizing phonon dynamics from experimental spectra remains a bottleneck due to the complexity and high dimensionality of ToF INS datasets. Here, we present a machine learning approach for the direct inversion of FCs from single-crystal INS measurements. The framework leverages synthetic training data generated using universal machine-learned force fields and an efficient physics-based forward model. We benchmark two neural architectures–one emphasizing structured latent representation learning and the other direct, supervised spectral regression–across simulated datasets for two materials under idealized and noisy conditions. The latent-representation model is subsequently applied to experimental single-crystal INS data on germanium. The model is shown to reproduce FCs derived from both first-principles simulations and from iterative optimization, and furthermore achieves reliable inference even from sparse, single-orientation measurements representing short data acquisitions. Analysis of the learned latent space reveals semantically continuous and physically interpretable encodings that support strong cross-domain generalization. By bridging theoretical and experimental domains, we establish a path toward rapid inversion of experimental spectra and data-driven interpretation of temperature-dependent lattice dynamics.

42 ENGINEERING↗

RSPECT: A PROSPECT-based model incorporating the real structure of rice leaves

Radiative transfer models (RTMs) describe how light is absorbed, scattered, and transmitted within leaves by simulating mechanistic light propagation processes. The PROSPECT model is based on measurable parameters (the leaf biochemical content) and a non-measurable parameter (the leaf anatomical structure represented by the leaf structure parameter (N)). The effect of N on the optical properties of leaves has been investigated through a number of local and global sensitivity analyses. Other studies have directly evaluated the effect of the leaf anatomical structure on spectral reflectance, particularly in the near infrared region. However, the relationship between N and the anatomical structure is unclear. Here, in this study, we leveraged eLeaf, a ray tracing-based 3D rice leaf simulator, to establish relationships between leaf anatomical features and spectral properties, enabling us to replace N in the PROSPECT-4 model with measurable leaf anatomical parameters and develop the RSPECT model. The leaf thickness at minor vein, leaf thickness at bulliform cells, mesophyll thickness at minor vein, and distance between two minor veins could be used to predict N effectively. The RSPECT model achieved spectral simulation accuracy comparable to PROSPECT-4 and was more suitable for parameter inversion of the physical and chemical properties of rice leaves, with relative root mean square errors of 7.4% for chlorophyll content, 5.6% for equivalent water thickness, and 7.5% for dry matter content. In conclusion, RSPECT improves radiative transfer modeling by integrating measurable anatomical features and provides a framework for extending this approach to other vegetation types.

hyperspectral↗

Spectral broadening from turbulence in multiscale lower hybrid current drive simulations

Abstract The scattering of lower hybrid (LH) waves due to scrape-off layer filaments is investigated. It is revealed that scattering can account for the LH spectral gap without any ad hoc modification to the wave-spectrum. This is shown using a multiscale simulation approach which allows, for the first time, the inclusion of full-wave scattering physics in ray-tracing/Fokker–Planck calculations. In this approach, full-wave scattering probabilities are calculated for a wave interacting with a statistical ensemble of filaments. These probabilities are coupled to ray-tracing equations using radiative transfer theory. This allows the modeling of scattering along the entire ray-trajectory, which can be important in the multi-pass regime. Simulations are conducted for LH current drive (LHCD) in Alcator C-Mod, resulting in excellent agreement with experimental current and hard x-ray profiles. A region in filament parameter space is identified in which the impact of scattering on LHCD is saturated. Such a state coincides with experimental LHCD measurements, suggesting saturation indeed occurs in C-Mod, and therefore the exact statistical properties of the filaments are not important.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

An EvoDevo Study of Salmonid Visual Opsin Dynamics and Photopigment Spectral Sensitivity

Salmonids are ideal models as many species follow a distinct developmental program from demersal eggs and a large yolk sac to hatching at an advanced developmental stage. Further, these economically important teleosts inhabit both marine- and freshwaters and experience diverse light environments during their life histories. At a genome level, salmonids have undergone a salmonid-specific fourth whole genome duplication event (Ss4R) compared to other teleosts that are already more genetically diverse compared to many non-teleost vertebrates. Thus, salmonids display phenotypically plastic visual systems that appear to be closely related to their anadromous migration patterns. This is most likely due to a complex interplay between their larger, more gene-rich genomes and broad spectrally enriched habitats; however, the molecular basis and functional consequences for such diversity is not fully understood. This study used advances in genome sequencing to identify the repertoire and genome organization of visual opsin genes (those primarily expressed in retinal photoreceptors) from six different salmonids [Atlantic salmon ( Salmo salar ), brown trout ( Salmo trutta ), Chinook salmon ( Oncorhynchus tshawytcha ), coho salmon ( Oncorhynchus kisutch ), rainbow trout ( Oncorhynchus mykiss ), and sockeye salmon ( Oncorhynchus nerka )] compared to the northern pike ( Esox lucius ), a closely related non-salmonid species. Results identified multiple orthologues for all five visual opsin classes, except for presence of a single short-wavelength-sensitive-2 opsin gene. Several visual opsin genes were not retained after the Ss4R duplication event, which is consistent with the concept of salmonid rediploidization. Developmentally, transcriptomic analyzes of Atlantic salmon revealed differential expression within each opsin class, with two of the long-wavelength-sensitive opsins not being expressed before first feeding. Also, early opsin expression in the retina was located centrally, expanding dorsally and ventrally as eye development progressed, with rod opsin being the dominant visual opsin post-hatching. Modeling by spectral tuning analysis and atomistic molecular simulation, predicted the greatest variation in the spectral peak of absorbance to be within the Rh2 class, with a ∼40 nm difference in λ max values between the four medium-wavelength-sensitive photopigments. Overall, it appears that opsin duplication and expression, and their respective spectral tuning profiles, evolved to maximize specialist color vision throughout an anadromous lifecycle, with some visual opsin genes being lost to tailor marine-based vision.

59 BASIC BIOLOGICAL SCIENCES↗

Spectral and temporal shaping of spectrally incoherent pulses in the infrared and ultraviolet

Laser–plasma instabilities (LPIs) hinder the interaction of high-energy laser pulses with targets. Simulations show that broadband spectrally incoherent pulses can mitigate these instabilities. Optimizing laser operation and target interaction requires controlling the properties of these optical pulses. We demonstrate closed-loop control of the spectral density and pulse shape of nanosecond spectrally incoherent pulses after optical parametric amplification in the infrared (∼1053 nm) and sum–frequency generation to the ultraviolet (∼351 nm) using spectral and temporal modulation in the fiber front end. The high versatility of the demonstrated approaches can support the generation of high-energy, spectrally incoherent pulses by future laser facilities for improved LPI mitigation.

47 OTHER INSTRUMENTATION↗

Evaluation of sky spectra and sky models in daylighting simulations

Sky models in daylight simulations represent the luminance variation across the sky-dome for different locations, dates, times and weather conditions, but skies are typically modelled as colourless. Recent studies explore techniques for incorporating the spectral content of daylighting in simulations. This paper provides an evaluation of the existing spectral sky models in lighting simulation software. The comparisons are made between the available mathematical sky models and naturally occurring skies that were recorded using high dynamic range photography and spectrophotometric measurements. The results show that recently developed sky models present progress compared to colourless sky models, but further research is needed to accurately simulate daylight spectra.

97 MATHEMATICS AND COMPUTING↗

Evaluating spectral cloud effective radius retrievals from the Enhanced MODIS Airborne Simulator (eMAS) during ORACLES

Satellite remote sensing retrievals of cloud effective radius (CER) are widely used for studies of aerosol–cloud interactions. Such retrievals, however, rely on forward radiative transfer (RT) calculations using simplified assumptions that can lead to retrieval errors when the real atmosphere deviates from the forward model. Here, coincident airborne remote sensing and in situ observations obtained during NASA's ObseRvations of Aerosols above CLouds and their intEractionS (ORACLES) field campaign are used to evaluate retrievals of CER for marine boundary layer stratocumulus clouds and to explore impacts of forward RT model assumptions and other confounding factors. Specifically, spectral CER retrievals from the Enhanced MODIS Airborne Simulator (eMAS) and the Research Scanning Polarimeter (RSP) are compared with polarimetric retrievals from RSP and with CER derived from droplet size distributions (DSDs) observed by the Phase Doppler Interferometer (PDI) and a combination of the Cloud and Aerosol Spectrometer (CAS) and the Two-Dimensional Stereo Probe (2D-S). The sensitivities of the eMAS and RSP spectral retrievals to assumptions about the DSD effective variance (CEV) and liquid water complex index of refraction are explored. CER and CEV inferred from eMAS spectral reflectance observations of the backscatter glory provide additional context for the spectral CER retrievals. The spectral and polarimetric CER retrieval agreement is case dependent, and updating the retrieval RT assumptions, including using RSP polarimetric CEV retrievals as a constraint, yields mixed results that are tied to differing sensitivities to vertical heterogeneity. Moreover, the in situ cloud probes, often used as the benchmark for remote sensing CER retrieval assessments, themselves do not agree, with PDI DSDs yielding CER values 1.3–1.6 µm larger than CAS and with CEV roughly 50 %–60 % smaller than CAS. Implications for the interpretation of spectral and polarimetric CER retrievals and their agreement are discussed.

Meyer, Kerry [NASA Goddard Space Flight Center (GS↗