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At least 109 records · Page 6

Vibrio MARTX toxin processing and degradation of cellular Rab GTPases by the cytotoxic effector Makes Caterpillars Floppy

Vibrio vulnificus causes life-threatening wound and gastrointestinal infections, mediated primarily by the production of a Multifunctional-Autoprocessing Repeats-In-Toxin (MARTX) toxin. The most commonly present MARTX effector domain, the Makes Caterpillars Floppy-like (MCF) toxin, is a cysteine protease stimulated by host adenosine diphosphate (ADP) ribosylation factors (ARFs) to autoprocess. Here, we show processed MCF then binds and cleaves host Ra s-related proteins in b rain (Rab) guanosine triphosphatases within their C-terminal tails resulting in Rab degradation. We demonstrate MCF binds Rabs at the same interface occupied by ARFs. Moreover, we show MCF preferentially binds to ARF1 prior to autoprocessing and is active to cleave Rabs only subsequent to autoprocessing. We then use structure prediction algorithms to demonstrate that structural composition, rather than sequence, determines Rab target specificity. We further determine a crystal structure of aMCF as a swapped dimer, revealing an alternative conformation we suggest represents the open, activated state of MCF with reorganized active site residues. The cleavage of Rabs results in Rab1B dispersal within cells and loss of Rab1B density in the intestinal tissue of infected mice. Collectively, our work describes an extracellular bacterial mechanism whereby MCF is activated by ARFs and subsequently induces the degradation of another small host guanosine triphosphatase (GTPase), Rabs, to drive organelle damage, cell death, and promote pathogenesis of these rapidly fatal infections.

Science & Technology - Other Topics

Topological grain boundary segregation transitions

Engineering the structure of grain boundaries (GBs) by solute segregation is a promising strategy to tailor the properties of polycrystalline materials. Solute segregation triggering phase transitions at GBs has been suggested theoretically to offer different pathways to design interfaces, but an understanding of their intrinsic atomistic nature is missing. Here, we combined atomic resolution electron microscopy and atomistic simulations to discover that iron segregation to GBs in titanium stabilizes icosahedral units (“cages”) that form robust building blocks of distinct GB phases. Owing to their five-fold symmetry, the iron cages cluster and assemble into hierarchical GB phases characterized by a different number and arrangement of the constituent icosahedral units. Our advanced GB structure prediction algorithms and atomistic simulations validate the stability of these observed phases and the high excess of iron at the GB that is accommodated by the phase transitions.

36 MATERIALS SCIENCE

Quantitative interpretation of Great Lakes remote sensing data

The paper discusses the quantitative interpretation of Great Lakes remote sensing water quality data. Remote sensing using color information must take into account (1) the existence of many different organic and inorganic species throughout the Great Lakes, (2) the occurrence of a mixture of species in most locations, and (3) spatial variations in types and concentration of species. The radiative transfer model provides a potential method for an orderly analysis of remote sensing data and a physical basis for developing quantitative algorithms. Predictions and field measurements of volume reflectances are presented which show the advantage of using a radiative transfer model. Spectral absorptance and backscattering coefficients for two inorganic sediments are reported.

Shook, D. F.

A microwave systems approach to measuring root zone soil moisture

Computer microwave satellite simulation models were developed and the program was used to test the ability of a coarse resolution passive microwave sensor to measure soil moisture over large areas, and to evaluate the effect of heterogeneous ground covers with the resolution cell on the accuracy of the soil moisture estimate. The use of realistic scenes containing only 10% to 15% bare soil and significant vegetation made it possible to observe a 60% K decrease in brightness temperature from a 5% soil moisture to a 35% soil moisture at a 21 cm microwave wavelength, providing a 1.5 K to 2 K per percent soil moisture sensitivity to soil moisture. It was shown that resolution does not affect the basic ability to measure soil moisture with a microwave radiometer system. Experimental microwave and ground field data were acquired for developing and testing a root zone soil moisture prediction algorithm. The experimental measurements demonstrated that the depth of penetration at a 21 cm microwave wavelength is not greater than 5 cm.

Newton, R. W.

"Smart" Electromechanical Shock Absorber

Shock-absorbing apparatus includes electromechanical actuator and digital feedback control circuitry rather than springs and hydraulic damping as in conventional shock absorbers. Device not subject to leakage and requires little or no maintenance. Attenuator parameters adjusted in response to sensory feedback and predictive algorithms to obtain desired damping characteristic. Device programmed to decelerate slowly approaching vehicle or other large object according to prescribed damping characteristic.

Stokes, Lebarian

Design of a final approach spacing tool for TRACON air traffic control

This paper describes an automation tool that assists air traffic controllers in the Terminal Radar Approach Control (TRACON) Facilities in providing safe and efficient sequencing and spacing of arrival traffic. The automation tool, referred to as the Final Approach Spacing Tool (FAST), allows the controller to interactively choose various levels of automation and advisory information ranging from predicted time errors to speed and heading advisories for controlling time error. FAST also uses a timeline to display current scheduling and sequencing information for all aircraft in the TRACON airspace. FAST combines accurate predictive algorithms and state-of-the-art mouse and graphical interface technology to present advisory information to the controller. Furthermore, FAST exchanges various types of traffic information and communicates with automation tools being developed for the Air Route Traffic Control Center. Thus it is part of an integrated traffic management system for arrival traffic at major terminal areas.

Davis, Thomas J.

Robot tracking system improvements and visual calibration of orbiter position for radiator inspection

The following separate topics are addressed: (1) improving a robotic tracking system; and (2) providing insights into orbiter position calibration for radiator inspection. The objective of the tracking system project was to provide the capability to track moving targets more accurately by adjusting parameters in the control system and implementing a predictive algorithm. A computer model was developed to emulate the tracking system. Using this model as a test bed, a self-tuning algorithm was developed to tune the system gains. The model yielded important findings concerning factors that affect the gains. The self-tuning algorithms will provide the concepts to write a program to automatically tune the gains in the real system. The section concerning orbiter position calibration provides a comparison to previous work that had been performed for plant growth. It provided the conceptualized routines required to visually determine the orbiter position and orientation. Furthermore, it identified the types of information which are required to flow between the robot controller and the vision system.

Tonkay, Gregory

Discrete sequence prediction and its applications

Learning from experience to predict sequences of discrete symbols is a fundamental problem in machine learning with many applications. We apply sequence prediction using a simple and practical sequence-prediction algorithm, called TDAG. The TDAG algorithm is first tested by comparing its performance with some common data compression algorithms. Then it is adapted to the detailed requirements of dynamic program optimization, with excellent results.

Laird, Philip

Lunar crescent visibility

We report the results of five Moonwatches, in which more than 2000 observers throughout North America attempted to sight the thin lunar crescent. For each Moonwatch we were able to determine the position of the Lunar Date Line (LDL), the line along which a normal observer has a 50% probability of spotting the Moon. The observational LDLs were then compared with predicted LDLs derived from crescent visibility prediction algorithms. We find that ancient and medieval rules are higly unreliable. More recent empirical criteria, based on the relative altitude and azimuth of the Moon at the time of sunset, have a reasonable accuracy, with the best specific formulation being due to Yallop. The modern theoretical model by Schaefer (based on the physiology of the human eye and the local observing conditions) is found to have the least systematic error, the least average error, and the least maximum error of all models tested. Analysis of the observations also provided information about atmospheric, optical and human factors that affect the observations. We show that observational lunar calendars have a natural bias to begin early.

Doggett, Leroy E.

Ocean color and atmospheric dimethyl sulfide: On their mesoscale variability

The mesoscale variability of dimethyl sulfide (DMS) and ocean color is explored to determine the feasibility of a predictive relationship. During NASA's Global Tropospheric Experiment/Chemical Instrumentation Test and Evaluation (GTE/CITE 3), simultaneous shipboard and aircraft studies were carried out in the North Atlantic, followed by aircraft studies in the South Atlantic. Surface concentrations of chlorophyll alpha were measured with an airborne spectroradiometer, the Ocean Data Acquisition System (ODAS), with simultaneous determinations of tropospheric DMS. Shipboard measurements of DMS in air and water as well as in situ chlorophyll alpha were taken in the North Atlantic. No relation was observed between shipboard aquatic DMS and chlorophyll alpha or primary productivity. Higher levels of aqueous DMS were not always reflected by atmospheric DMS, although shipboard and aircraft measurements of atmospheric DMS agreed very well. A significant relationship between atmospheric DMS and ocean color was seen once at low altitudes in both the North and South Atlantic only under clean air conditions. Atmospheric DMS levels during the North Atlantic experiment were probably lowered by the presence of mostly polluted air masses in the study area and were, overall, probably not representative of the in situ sea-to-air flux of DMS. Changes in concentration of aircraft-sensed chlorophyllous pigments were not reflected by atmospheric DMS. If a predictive algorithm is to be found, phytoplankton blooms should probably be the first place to study an ocean color-DMS relationship.

Matrai, Patricia A.

Ideas for Future GPS Timing Improvements

Having recently met stringent criteria for full operational capability (FOC) certification, the Global Positioning System (GPS) now has higher customer expectations than ever before. In order to maintain customer satisfaction, and the meet the even high customer demands of the future, the GPS Master Control Station (MCS) must play a critical role in the process of carefully refining the performance and integrity of the GPS constellation, particularly in the area of timing. This paper will present an operational perspective on several ideas for improving timing in GPS. These ideas include the desire for improving MCS - US Naval Observatory (USNO) data connectivity, an improved GPS-Coordinated Universal Time (UTC) prediction algorithm, a more robust Kalman Filter, and more features in the GPS reference time algorithm (the GPS composite clock), including frequency step resolution, a more explicit use of the basic time scale equation, and dynamic clock weighting. Current MCS software meets the exceptional challenge of managing an extremely complex constellation of 24 navigation satellites. The GPS community will, however, always seek to improve upon this performance and integrity.

Hutsell, Steven T.

Numerical Modeling Studies of Wake Vortex Transport and Evolution Within the Planetary Boundary Layer

The fundamental objective of this research is study behavior of aircraft wake vortices within atmospheric boundary layer (ABL) in support of developing the system, Aircraft VOrtex Spacing System (AVOSS), under NASA's Terminal Area Productivity (TAR) program that will control aircraft spacing within the narrow approach corridors of airports. The purpose of the AVOSS system is to increase airport capacity by providing a safe reduction in separation of aircraft compared to the now-existing flight rules. In our first funding period (7 January 19994 - 6 April 1997), we have accomplished extensive model development and validation of ABL simulations. Using the validated model, in our second funding period (7 April 1997 - 6 April 2000) we have investigated the effects of ambient atmospheric turbulence on vortex decay and descent, Crow instability, and wake vortex interaction with the ground. Recognizing the crucial influence of ABL turbulence on wake vortex behavior, we have also developed a software generating vertical profiles of turbulent kinetic energy (TKE) or energy dissipation rate (EDR), which are, in turn, used as input data in the AVOSS prediction algorithms.

Lin, Yuh-Lang

Numerical Simulation of Aircraft Trailing Vortices

The increase in air traffic is currently outpacing the development of new airport runways. This is leading to greater air traffic congestion, resulting in costly delays and cancellations. The National Aeronautics and Space Administration (NASA) under its Terminal Area Productivity (TAP) program is investigating new technologies that will allow increased airport capacity while maintaining the present standards for safety. As an element of this program, the Aircraft Vortex Spacing System (AVOSS) is being demonstrated in July 2000, at Dallas Ft-Worth Airport. This system allows reduced aircraft separations, thus increasing the arrival and departure rates, while insuring that wake vortices from a leading aircraft do not endanger trailing aircraft. The system uses predictions or wake vortex position and strength based on input from the current weather state. This prediction is accomplished by a semi-empirical model developed from theory, field observations, and relationships derived from numerical wake vortex simulations. Numerical experiments with a Large Eddy Simulation (LES) model are being conducted in order to provide guidance for the enhancement of these prediction algorithms. The LES Simulations of wake vortices are carried out with NASA's Terminal Area Simulation System (TASS). Previous wake vortex investigations with TASS are described. The primary objective of these numerical studies has been to quantify vortex transport and decay in relation to atmospheric variables. This paper summarizes many of the previous investigations with the TASS model and presents some new results regarding the onset of wake vortex decay.

Proctor, Fred H.

Enhanced Airport Capacity Through Safe, Dynamic Reductions in Aircraft Separation: NASA's Aircraft VOrtex Spacing System (AVOSS)

An aspect of airport terminal operations that holds potential for efficiency improvements is the separation criteria applied to aircraft for wake vortex avoidance. These criteria evolved to represent safe spacing under weather conditions conducive to the longest wake hazards, and are consequently overly conservative during a significant portion of operations. Under many ambient conditions, such as moderate crosswinds or turbulence, wake hazard durations are substantially reduced. To realize this reduction NASA has developed a proof-of-concept Aircraft Vortex Spacing System (AVOSS). Successfully operated in a real-time field demonstration during July 2000 at the Dallas Ft. Worth International Airport, AVOSS is a novel integration of weather sensors, wake sensors, and analytical wake prediction algorithms. Gains in airport throughput using AVOSS spacing as compared to the current criteria averaged 6%, with peak values approaching the theoretical maximum of 16%. The average throughput gain translates to 15-40% reductions in delay when applied to realistic capacity ratios at major airports.

OConnor, Cornelius J.

Demonstration of Imaging Fourier Transform Spectrometer (FTS) Performance for Planetary and Geostationary Earth Observing

The combination of massively parallel spatial sampling and accurate spectral radiometry offered by imaging FTS makes it extremely attractive for earth and planetary remote sensing. We constructed a breadboard instrument to help assess the potential for planetary applications of small imaging FTS instruments in the 1 - 5 micrometer range. The results also support definition of the NASA Geostationary Imaging FTS (GIFTS) instrument that will make key meteorological and climate observations from geostationary earth orbit. The Planetary Imaging FTS (PIFTS) breadboard is based on a custom miniaturized Bomen interferometer that uses corner cube reflectors, a wishbone pivoting voice-coil delay scan mechanism, and a laser diode metrology system. The interferometer optical output is measured by a commercial infrared camera procured from Santa Barbara Focalplane. It uses an InSb 128x128 detector array that covers the entire FOV of the instrument when coupled with a 25 mm focal length commercial camera lens. With appropriate lenses and cold filters the instrument can be used from the visible to 5 micrometers. The delay scan is continuous, but slow, covering the maximum range of +/- 0.4 cm in 37.56 sec at a rate of 500 image frames per second. Image exposures are timed to be centered around predicted zero crossings. The design allows for prediction algorithms that account for the most recent fringe rate so that timing jitter produced by scan speed variations can be minimized. Response to a fixed source is linear with exposure time nearly to the point of saturation. Linearity with respect to input variations was demonstrated to within 0.16% using a 3-point blackbody calibration. Imaging of external complex scenes was carried out at low and high spectral resolution. These require full complex calibration to remove background contributions that vary dramatically over the instrument FOV. Testing is continuing to demonstrate the precise radiometric accuracy and noise characteristics.

Revercomb, Henry E.

Latest Development in Advanced Sensors at Kennedy Space Center (KSC)

Inexpensive space transportation system must be developed in order to make spaceflight more affordable. To achieve this goal, there is a need to develop inexpensive smart sensors to allow autonomous checking of the health of the vehicle and associated ground support equipment, warn technicians or operators of an impending problem and facilitate rapid vehicle pre-launch operations. The Transducers and Data Acquisition group at Kennedy Space Center has initiated an effort to study, research, develop and prototype inexpensive smart sensors to accomplish these goals. Several technological challenges are being investigated and integrated in this project multi-discipline sensors; self-calibration, health self-diagnosis capabilities embedded in sensors; advanced data acquisition systems with failure prediction algorithms and failure correction (self-healing) capabilities.

Perotti, Jose M.

Wake Vortex Advisory System (WakeVAS) Concept of Operations

NASA Langley Research Center has a long history of aircraft wake vortex research, with the most recent accomplishment of demonstrating the Aircraft VOrtex Spacing System (AVOSS) at Dallas/Forth Worth International Airport in July 2000. The AVOSS was a concept for an integration of technologies applied to providing dynamic wake-safe reduced spacing for single runway arrivals, as compared to current separation standards applied during instrument approaches. AVOSS included state-of-the-art weather sensors, wake sensors, and a wake behavior prediction algorithm. Using real-time data AVOSS averaged a 6% potential throughput increase over current standards. This report describes a Concept of Operations for applying the technologies demonstrated in the AVOSS to a variety of terminal operations to mitigate wake vortex capacity constraints. A discussion of the technological issues and open research questions that must be addressed to design a Wake Vortex Advisory System (WakeVAS) is included.

Rutishauser, David

Enhanced Weather Radar (EWxR) System

An airborne weather radar system, the Enhanced Weather Radar (EWxR), with enhanced on-board weather radar data processing was developed and tested. The system features additional weather data that is uplinked from ground-based sources, specialized data processing, and limited automatic radar control to search for hazardous weather. National Weather Service (NWS) ground-based Next Generation Radar (NEXRAD) information is used by the EWxR system to augment the on-board weather radar information. The system will simultaneously display NEXRAD and on-board weather radar information in a split-view format. The on-board weather radar includes an automated or hands-free storm-finding feature that optimizes the radar returns by automatically adjusting the tilt and range settings for the current altitude above the terrain and searches for storm cells near the atmospheric 0-degree isotherm. A rule-based decision aid was developed to automatically characterize cells as hazardous, possibly-hazardous, or non-hazardous based upon attributes of that cell. Cell attributes are determined based on data from the on-board radar and from ground-based radars. A flight path impact prediction algorithm was developed to help pilots to avoid hazardous weather along their flight plan and their mission. During development the system was tested on the NASA B757 aircraft and final tests were conducted on the Rockwell Collins Sabreliner.

Kronfeld, Kevin M.