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Cloud-Based Solutions for Monitoring Coastal Ecosystems and Prioritization of Restoration Efforts Across Belize
In recent years the availability of automated change detection algorithms in Google Earth Engine has permitted cloud-based processing of large time series of satellite imagery. Models such as the Continuous Change Detection and Classification (CCDC), CCDC-Spectral Mixture Analysis (CCDC-SMA), and Landsat-based Detection of Trends in Disturbance and Recovery (LandTrendr) allow users to exploit decades of Earth Observations (EO) , leveraging the Landsat archive and data from other sensors to detect disturbance in forest ecosystems. Despite the wide adoption of these methods, robust documentation and growing community of users, little research has explored their use in mangrove environments. Mangroves are dynamic environments subject to changes due to not only the natural migration of mudflats but also coastal erosion, urban expansion, aquaculture practices, etc. This work aims to identify best practices for the application of these models to identify and monitor changes in the Belizean mangroves, which experienced an estimated 5.4% decrease in extent between 1980 and 2017 (Cherrington et al. 2020). Partnering directly with the Belizean Forest Department, our team will develop a replicable, efficient methodology to annually update the country’s mangrove extent employing EO-based change detection. This collaboration supports Belize’s marine conservation and climate resilience efforts, such as its Blue Bond agreement with the Nature Conservancy, building on national processes to monitor these critical ecosystems.
Mangroves↗
CIECAT (Cyber-Informed Engineering Commercial Buildings Analysis Tool) [SWR-25-172]
The Cyber-Informed Engineering Commercial Buildings Analysis Tool (CIECAT) was developed in collaboration with the U.S. Department of Energy’s Office of Cybersecurity, Energy Security, and Emergency Response (CESER). This tool is a energy source subcomponent integrated into the CIEMAT ecosystem and is developed to enhance the security and resilience of Commercial Buildings by incorporating Cyber-Informed Engineering (CIE) principles into the Commercial Buildings.
Etigowni, Sriharsha [National Laboratory of the Ro↗
Enabling Space Exploration Medical System Development Using a Tool Ecosystem
The NASA Human Research Program’s (HRP) Exploration Medical Capability (ExMC) Element is utilizing a Model Based Systems Engineering (MBSE) approach to enhance the development of systems engineering products that will be used to advance medical system designs for exploration missions beyond Low Earth Orbit. In support of future missions, the team is capturing content such as system behaviors, functional decompositions, architecture, system requirements and interfaces, and recommendations for clinical capabilities and resources in Systems Modeling Language (SysML) models. As these products mature, SysML models provide a way for ExMC to capture relationships among the various products, which includes supporting more integrated and multi-faceted views of future medical systems. In addition to using SysML models, HRP and ExMC are developing supplementary tools to support two key functions: 1) prioritizing current and future research activities for exploration missions in an objective manner; and 2) enabling risk-informed and evidence-based trade space analysis for future space vehicles, missions, and systems. This paper will discuss the long-term HRP and ExMC vision for the larger ecosystem of tools, which include dynamic Probabilistic Risk Assessment (PRA) capabilities, additional SysML models, a database of system component options, and data visualizations. It also includes a review of an initial Pilot Project focused on enabling medical system trade studies utilizing data that is coordinated across tools for consistent outputs (e.g., mission risk metrics that are associated with medical system mass values and medical conditions addressed). This first Pilot Project demonstrated successful operating procedures and integration across tools. Finally, the paper will also cover a second Pilot Project that utilizes tool enhancements such as medical system optimization capabilities, post-processing, and visualization of generated data for subject matter expert review, and increased integration amongst the tools themselves.
Amador, Jennifer R.↗
Enabling Space Exploration Medical System Development Using a Tool Ecosystem
The NASA Human Research Program's (HRP) Exploration Medical Capability (ExMC) Element is utilizing a Model Based Systems Engineering (MBSE) approach to enhance the development of systems engineering products that will be used to advance medical system designs for exploration missions beyond Low Earth Orbit. In support of future missions, the team is capturing content such as system behaviors, functional decompositions, architecture, system requirements and interfaces, and recommendations for clinical capabilities and resources in Systems Modeling Language (SysML) models. As these products mature, SysML models provide a way for ExMC to capture relationships among the various products, which includes supporting more integrated and multi-faceted views of future medical systems. In addition to using SysML models, HRP and ExMC are developing supplementary tools to support two key functions: 1) prioritizing current and future research activities for exploration missions in an objective manner; and 2) enabling risk-informed and evidence-based trade space analysis for future space vehicles, missions, and systems. This paper will discuss the long-term HRP and ExMC vision for the larger ecosystem of tools, which include dynamic Probabilistic Risk Assessment (PRA) capabilities, additional SysML models, a database of system component options, and data visualizations. It also includes a review of an initial Pilot Project focused on enabling medical system trade studies utilizing data that is coordinated across tools for consistent outputs (e.g., mission risk metrics that are associated with medical system mass values and medical conditions addressed). This first Pilot Project demonstrated successful operating procedures and integration across tools. Finally, the paper will also cover a second Pilot Project that utilizes tool enhancements such as medical system optimization capabilities, post-processing, and visualization of generated data for subject matter expert review, and increased integration amongst the tools themselves.
Amador, Jennifer R.↗
Growth-Adapted Tensegrity Structures: A New Calculus for the Space Economy
We describe a novel approach to create and engineer an economically viable space habitat development technology, for deployment of a lightweight tensegrity habitat structure orbiting at Earth-Moon L2, where onboard robotic assets will use space-based materials to provide water for shielding, irrigation and life support, soil for ecosystem development, and to enable structural maintenance and enhancement. The habitat can become a tourist destination, an economic hub, and a multi-purpose research and support facility for lunar surface development and space ecosystem life sciences.
Materials↗
The Geothermal Entrepreneurship Organization (GEO) Accelerating Technology Transfer, Testing and Adoption of Cutting-edge Extreme Environment Drilling
The Geothermal Entrepreneurship Organization launched in 2019 with the goal of building a geothermal innovation ecosystem at the University of Texas at Austin (UT Austin), and in the State of Texas at large. The theses underlying the work of GEO were 1) that with targeted advocacy, recruitment, organization, and coalition building, research institutions with legacy excellence in petroleum and geosystems engineering could become engines of geothermal innovation, research and development; 2) that startups were the appropriate vehicle to speed these innovations from the lab into the field, and building a geothermal startup ecosystem in Texas would not only advance next generation geothermal concepts into the field, but also help spur oil and gas engagement in the space, and 3) that with targeted engagement, education, and recruitment across stakeholders in the oil and gas industry and the State of Texas generally, the oil and gas industry, and other legacy oil and gas entities in the State could become sources of large scale deployment of geothermal energy. The overall goal was to create a ‘snowball’ effect, where targeted impactful actions would catalyze self-sustaining, organic growth of a new geothermal ecosystem in the State of Texas. That goal was achieved through GEO’s work. To test its theses, GEO began work by interviewing and recruiting UT Austin faculty and alumni into geothermal. At the beginning of the GEO project, there was no geothermal activity ongoing within the UT Austin Petroleum and Geosystems Engineering Department, the Bureau of Economic Geology, or the Jackson School of Geoscience, and many faculty approached had not before considered how their skillsets might apply in the space. By the end of the project period, three major research consortia focused on geothermal were launched as a result of GEO’s work, one at the Bureau of Economic Geology, one within the Petroleum and Geosystems Engineering Department, and another organized by GEO across six research institutions across the State of Texas, called the Texas Geothermal Institute. Geothermal curricula was launched at UT Austin, and UT Austin began attracting new geothermal enthusiasts into its faculty, including Dr. Silviu Livescu, former Chief Scientist of Baker Hughes. Startups recruited and mentored by GEO launched, raised funding, and deployed (or are currently deploying) their concepts in the field. By the end of the project period, the GEO concept expanded to faculty beyond UT Austin to other institutions, like Texas A&M, the University of Houston, and Rice University, and geothermal engagement began at those institutions as well. Multiple faculty members and alumni across these institutions launched geothermal startup companies, launched geothermal research consortia, and/or began teaching geothermal courses. In 2020, GEO launched what was to become the largest geothermal conference in the world by its second year, ‘PIVOT – From Hydrocarbons to Heat’, and the resulting momentum catalyzed the Society of Petroleum Engineers to launch a geothermal technical section, drove more startups to launch out of the ecosystem, and drove actors in the State of Texas, NGOs, and stakeholders globally to become engaged. Riding this momentum, the Texas Geothermal Energy Alliance was launched, the first ever industry association dedicated to advancing geothermal energy in the State of Texas. The Texas geothermal ecosystem after only two years of building and support is now robust, quickly growing, and self-sustaining. By 2021, the Texas geothermal ecosystem had attracted the attention of philanthropists, funding entities, media, and influencers outside of Texas, and GEO’s executive director was invited to give a TED talk about oil and gas engagement in building the future of geothermal energy, which elevated the success of the ecosystem to a global audience.
15 GEOTHERMAL ENERGY↗
Plant science decadal vision 2020–2030: Reimagining the potential of plants for a healthy and sustainable future
Abstract Plants, and the biological systems around them, are key to the future health of the planet and its inhabitants. The Plant Science Decadal Vision 2020–2030 frames our ability to perform vital and far‐reaching research in plant systems sciences, essential to how we value participants and apply emerging technologies. We outline a comprehensive vision for addressing some of our most pressing global problems through discovery, practical applications, and education. The Decadal Vision was developed by the participants at the Plant Summit 2019, a community event organized by the Plant Science Research Network. The Decadal Vision describes a holistic vision for the next decade of plant science that blends recommendations for research, people, and technology. Going beyond discoveries and applications, we, the plant science community, must implement bold, innovative changes to research cultures and training paradigms in this era of automation, virtualization, and the looming shadow of climate change. Our vision and hopes for the next decade are encapsulated in the phrase reimagining the potential of plants for a healthy and sustainable future. The Decadal Vision recognizes the vital intersection of human and scientific elements and demands an integrated implementation of strategies for research (Goals 1–4), people (Goals 5 and 6), and technology (Goals 7 and 8). This report is intended to help inspire and guide the research community, scientific societies, federal funding agencies, private philanthropies, corporations, educators, entrepreneurs, and early career researchers over the next 10 years. The research encompass experimental and computational approaches to understanding and predicting ecosystem behavior; novel production systems for food, feed, and fiber with greater crop diversity, efficiency, productivity, and resilience that improve ecosystem health; approaches to realize the potential for advances in nutrition, discovery and engineering of plant‐based medicines, and "green infrastructure." Launching the Transparent Plant will use experimental and computational approaches to break down the phytobiome into a "parts store" that supports tinkering and supports query, prediction, and rapid‐response problem solving. Equity, diversity, and inclusion are indispensable cornerstones of realizing our vision. We make recommendations around funding and systems that support customized professional development. Plant systems are frequently taken for granted therefore we make recommendations to improve plant awareness and community science programs to increase understanding of scientific research. We prioritize emerging technologies, focusing on non‐invasive imaging, sensors, and plug‐and‐play portable lab technologies, coupled with enabling computational advances. Plant systems science will benefit from data management and future advances in automation, machine learning, natural language processing, and artificial intelligence‐assisted data integration, pattern identification, and decision making. Implementation of this vision will transform plant systems science and ripple outwards through society and across the globe. Beyond deepening our biological understanding, we envision entirely new applications. We further anticipate a wave of diversification of plant systems practitioners while stimulating community engagement, underpinning increasing entrepreneurship. This surge of engagement and knowledge will help satisfy and stoke people's natural curiosity about the future, and their desire to prepare for it, as they seek fuller information about food, health, climate and ecological systems.
59 BASIC BIOLOGICAL SCIENCES↗
Progressive TDI Measurements with the PACE OCI ETU
The Plankton Aerosol Cloud ocean Ecosystem (PACE) Ocean Color Instrument (OCI) has completed the ground test program for its engineering unit (ETU) and testing of the flight unit will begin in the near future. OCIis a grating spectrometer with hyperspectral coverage from about 340 nm to 885 nm with 9 additional filtered channels in the SWIR. Two CCDs are used as detectors for the hyperspectral channels. One important operating mode of the CCDs on OCI is progressive time delay integration (or PTDI). In this mode, the charge in the CCD can be held for multiples of the nominal integration times. A series of these measurements can be made with progressively increasing multiples of the nominal integration time as the instrument scans across a uniform source. Ground testing with this operating mode on OCI ETU has shown promising results. This work will present measurements taken with the PTDI mode and the analysis of OCI ETU linearity and dynamic range
PACE↗
Western Tennessee Water Resources: Leveraging High Resolution Remotely Sensed Data to Assess Water Availability and Vulnerability in the Memphis Aquifer Area in West Tennessee
The Memphis Aquifer (MA) is located in the Mississippi Embayment that extends 250,000 square kilometers across eight states. Fayette and Haywood counties in West Tennessee are situated within the recharge zone of the MA and include the forthcoming Ford “mega campus” named Blue Oval City (BOC), which will consist of a vehicle-production facility and battery assembly division. Increased water demand and land cover change resulting from urban development, such as BOC in the MA’s narrow recharge zone, threaten the aquifer’s groundwater storage and recharge rate. Groundwater recharge factors that influence the narrow recharge zone of the MA include precipitation, evapotranspiration, runoff, and land cover type. In partnership with Protect Our Aquifer (POA) and the Center for Applied Earth Science and Engineering Research (CAESAR) at the University of Memphis, the team used data from the ECOsystem Spaceborne Thermal Radiometer Experiment on Space Station (ECOSTRESS), Integrated Multi-Satellite Retrievals for Global Precipitation Measurement (GPM IMERG), and Landsat 8 Operational Land Imager (OLI) and Thermal Infrared Sensor (TIRS). The team also used ancillary data from the National Land Cover Database (NLCD) and the North American Land Data Assimilation System (NLDAS) Noah Land Surface Model. These results identified “thriving” recharge locations, which are areas most conducive to aquifer recharge in Fayette County. The partners may use the results to prioritize specific areas in need of protection before they become susceptible to the effects of urbanization and industrialization.
precipitation↗
Empowering Open Science with the Science Discovery Engine
: This presentation will describe the work to date in building the SDE as well as what the team has learned about the SMD ecosystem, information curation, and data governance. A short demonstration of the SDE will be presented, and an overview of near- and long-term goals for future development will be shared. Community feedback will be welcomed about the interface, content, and other features to help inform actions to maximize the SDE’s performance and usability. Whether users aim to discover Earth-like atmospheres on planets outside of our solar system or better understand the impacts of solar energy on our own planet, the Science Discovery Engine provides a means for scientists and all curious individuals to find content to further their understanding of science across all time and space scales.
Emily Foshee↗
Deploying Extended Reality (XR) for Digital Operations and Maintenance (O&M) at the Mechanisms Engineering Test Loop (METL)
This report documents the preliminary efforts to digitize operation and maintenance (O&M) activities for the Mechanisms Engineering Test Loop (METL). METL became operational in September 2018 with the mission to provide an ecosystem for Advanced Reactor Development (ARD). METLs flagship facility’s primary purpose is conducting small to intermediate scale tests for Sodium Fast Reactors (SFR). Its resemblance to commercial SFR’s intermediate heat transport system, prototypic operating conditions, and industrial construction practices/materials provides the overarching benefit of establishing a proving ground for emerging operations and maintenance (O&M) activities such as incorporating Extended Reality (XR) applications throughout the program lifecycle.
21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗
A swapped genetic code prevents viral infections and gene transfer
Engineering the genetic code of an organism has been proposed to provide a firewall from natural ecosystems by preventing viral infections and gene transfer. However, numerous viruses and mobile genetic elements encode parts of the translational apparatus, potentially rendering a genetic-code-based firewall ineffective. Here we show that such mobile transfer RNAs (tRNAs) enable gene transfer and allow viral replication in Escherichia coli despite the genome-wide removal of 3 of the 64 codons and the previously essential cognate tRNA and release factor genes. We then establish a genetic firewall by discovering viral tRNAs that provide exceptionally efficient codon reassignment allowing us to develop cells bearing an amino acid-swapped genetic code that reassigns two of the six serine codons to leucine during translation. This amino acid-swapped genetic code renders cells resistant to viral infections by mistranslating viral proteomes and prevents the escape of synthetic genetic information by engineered reliance on serine codons to produce leucine-requiring proteins. As these cells may have a selective advantage over wild organisms due to virus resistance, we also repurpose a third codon to biocontain this virus-resistant host through dependence on an amino acid not found in nature. Furthermore, our results may provide the basis for a general strategy to make any organism safely resistant to all natural viruses and prevent genetic information flow into and out of genetically modified organisms.
59 BASIC BIOLOGICAL SCIENCES↗
High-Temperature Sodium System Structural Health Monitoring (SHM) Technologies at the Mechanisms Engineering Test Loop (METL)
This report documents the deployment of non-destructive testing (NDT) technologies at the Mechanisms Engineering Test Loop (METL). METL became operational in September 2018 with the mission to provide an ecosystem for Advanced Reactor Development (ARD). METLs flagship facility’s primary purpose is conducting small to intermediate scale tests for Sodium Fast Reactors (SFR). Its resemblance to a commercial SFR’s intermediate heat transport system, prototypic operating conditions, and industrial construction practices/materials provides the overarching benefit of establishing a proving ground for devices of all technology readiness levels as well as commercial off-the-shelf equipment yet to be demonstrated on a sodium system.
22 GENERAL STUDIES OF NUCLEAR REACTORS↗
Tetranucleotide frequencies differentiate genomic boundaries and metabolic strategies across environmental microbiomes
Microbiomes are constrained by physicochemical conditions, nutrient regimes, and community interactions across diverse environments, yet genomic signatures of this adaptation remain unclear. Metagenome sequencing is a powerful technique to analyze genomic content in the context of natural environments, establishing concepts of microbial ecological trends. Here, we developed a data discovery tool-a tetranucleotide-informed metagenome stability diagram-that is publicly available in the integrated microbial genomes and microbiomes (IMG/M) platform for metagenome ecosystem analyses. We analyzed the tetranucleotide frequencies from quality-filtered and unassembled sequence data of over 12,000 metagenomes to assess ecosystem-specific microbial community composition and function. We found that tetranucleotide frequencies can differentiate communities across various natural environments and that specific functional and metabolic trends can be observed in this structuring. Our tool places metagenomes sampled from diverse environments into clusters and along gradients of tetranucleotide frequency similarity, suggesting microbiome community compositions specific to gradient conditions. Within the resulting metagenome clusters, we identify protein-coding gene identifiers that are most differentiated between ecosystem classifications. We plan for annual updates to the metagenome stability diagram in IMG/M with new data, allowing for refinement of the ecosystem classifications delineated here. This framework has the potential to inform future studies on microbiome engineering, bioremediation, and the prediction of microbial community responses to environmental change. IMPORTANCE: Microbes adapt to diverse environments influenced by factors like temperature, acidity, and nutrient availability. We developed a new tool to analyze and visualize the genetic makeup of over 12,000 microbial communities, revealing patterns linked to specific functions and metabolic processes. This tool groups similar microbial communities and identifies characteristic genes within environments. By continually updating this tool, we aim to advance our understanding of microbial ecology, enabling applications like microbial engineering, bioremediation, and predicting responses to environmental change.
Kellom, Matthew↗
The Large Footprint of Small-scale Artisanal Gold Mining in Ghana
Gold mining has played a significant role in Ghana's economy for centuries. Regulation of this industry has varied over time and while industrial mining is prevalent in the country, the expansion of artisanal mining, or Galamsey has escalated in recent years. Many of these artisanal mines are not only harmful to human health due to the use of Mercury (Hg) in the amalgamation process, but also leave a significant footprint on terrestrial ecosystems, degrading and destroying forested ecosystems in the region. In this study, the Landsat image archive available through Google Earth Engine was used to quantify the total footprint of vegetation loss due to artisanal goldmines in Ghana from 2005 to 2019 and understand how conversion of forested regions to mining has changed over a decadal period from 2007 to 2017. A combination of machine learning and change detection algorithms were used to calculate different land cover conversions and the timing of conversion annually. Within the study area of southwestern Ghana, our results indicate that approximately 47,000 ha (⨦2218 ha) of vegetation were converted to mining at an average rate of ~2600 ha yr−1. The results indicate that a high percentage(~50%) of this mining occurred between 2014 and 2017. Around 700 ha of this mining occurred within protected areas as mapped by the World Database of Protected Areas. In addition to deforestation, increased artisanal mining activity in recent years has the potential to affect human health, access to drinking water resources and food security. This work expands upon limited research into the spatial footprint of Galamseyin Ghana, complements mapping efforts by local geographers, and will support efforts by the government of Ghana to monitor deforestation caused by artisanal mining.
Abigail Barenblitt↗
Experiential findings for sustainable software ecosystems to support experimental and observational science
In the search for a sustainable approach for software ecosystems that supports experimental and observational science (EOS) across Oak Ridge National Laboratory (ORNL), we conducted a survey to understand the current and future landscape of EOS software and data. This paper describes the survey design we used to identify significant areas of interest, gaps, and potential opportunities, followed by a discussion on the obtained responses. The survey formulates questions about project demographics, technical approach, and skills required for the present and the next five years. Here, the study was conducted among 38 ORNL participants between June and July of 2021 and followed the required guidelines for human subjects training. We plan to use the collected information to help guide a vision for sustainable, community-based, and reusable scientific software ecosystems that need to adapt effectively to: (i) the evolving landscape of heterogeneous hardware in the next generation of instruments and computing (e.g. edge, distributed, accelerators), and (ii) data management requirements for data-driven science using artificial intelligence.
97 MATHEMATICS AND COMPUTING↗
Great Lakes Water Resources II: A Google Earth Engine Tool to Automate Wetland Mapping Using Optical and Radar Satellite Sensors in the Great Lakes Basin for Wetland Management and Monitoring
The Great Lakes Basin is one of the world’s largest freshwater ecosystems. The Basin harbors over 200,000 acres of wetlands. These wetlands provide a variety of environmental, ecological, and recreational functions to over 30 million people in the region. Some of these functions include improving water quality, mitigating flood impacts, providing wildlife habitat, and housing recreational activities. However, due to anthropogenic activities, habitat conversion and degradation threaten to disrupt or destroy remaining wetland ecosystems. Maps of wetland distribution based on ground surveys are costly and labor-intensive, prohibiting timely evaluations of wetland loss and gain. The Great Lakes Water Resources II team at the NASA Jet Propulsion Laboratory developed the Wetlands Extent Tool 2.0 (WET 2.0) in Google Earth Engine to automate mapping of wetland distribution in the Great Lakes Basin. The team partnered with the US Fish and Wildlife Service (USFWS), Environmental Protection Agency (EPA), Minnesota Department of Natural Resources (MDNR), the National Oceanic and Atmospheric Administration (NOAA), and Ducks Unlimited (DU). WET 2.0 incorporates Landsat 8 Operational Land Imager (OLI), Sentinel-1 C-band Synthetic Aperture Radar (C-SAR), and Sentinel-2 Multispectral Instrument (MSI) satellite data. WET 2.0 is trained to classify anywhere in the Great Lakes Basin. Utilizing a Random Forest classifier, WET 2.0 is capable of automatically mapping wetland extent in the entire Great Lakes Basin, achieving a mean overall accuracy of 80.12% when tested in Michigan. Findings and maps produced in WET 2.0 will enable our partners to identify areas of ecosystem degradation and wetland destruction in order to enact environmental practices and policy initiatives to maintain environmental and economic health in the area.
Water Resources↗