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All sourcesNASA NTRSDOE OSTI
NASA NTRS2004

The Response of the North Atlantic Bloom to NAO Forcing

Results from the climatologically forced coupled ice/ocean/biogeochemical model that covers the Arctic and North Atlantic Oceans are presented and compared to the chlorophyll fields of satellite-derived ocean color measurements. Biogeochemical processes in the model are determined from the interactions among four phytoplankton functional groups (diatoms, chlorophytes, cyanobacteria and coccolithophores) and four nutrients (nitrate, ammonium, silicate and dissolved iron). The model simulates the general large-scale pattern in April, May and June, when compared to both satellite-derived and in situ observations. The subpolar North Atlantic was cool in the 1980s and warm in the latter 1990s, corresponding to the CZCS and SeaWiFS satellite observing periods, respectively. The oceanographic conditions during these periods resemble the typical subpolar upper ocean response to the NAO+ and NAO-phases, respectively. Thus, we use the atmospheric forcing composites from the two NAO phases to simulate the variability of the mid-ocean bloom during the satellite observing periods. The model results show that when the subpolar North Atlantic is cool, the NAO+ case, more nutrients are available in early spring than when the North Atlantic is warm, the NAO-case. However, the NAO+ simulation produces a later bloom than the NAO-simulation. This difference in the bloom times is also identified in SeaWiFS and CZCS satellite measurements. In the model results, we can trace the difference to the early diatom bloom due to a warmer upper ocean. The higher nutrient abundance in the NAO+ case did not provide larger total production than in the NAO- case, instead the two cases had a comparable area averaged amplitude. This leads us to conclude that in the subpolar North Atlantic, the timing of the spring phytoplankton bloom depends on surface temperature and the magnitude of the bloom is not significantly impacted by the nutrient abundance.

Mizoguchi, Ken-Ichi↗
NASA NTRS2017

Simulating PACE Global Ocean Radiances

The NASA PACE mission is a hyper-spectral radiometer planned for launch in the next decade. It is intended to provide new information on ocean biogeochemical constituents by parsing the details of high resolution spectral absorption and scattering. It is the first of its kind for global applications and as such, poses challenges for design and operation. To support pre-launch mission development and assess on-orbit capabilities, the NASA Global Modeling and Assimilation Office has developed a dynamic simulation of global water-leaving radiances, using an ocean model containing multiple ocean phytoplankton groups, particulate detritus, particulate inorganic carbon (PIC), and chromophoric dissolved organic carbon (CDOC) along with optical absorption and scattering processes at 1 nm spectral resolution. The purpose here is to assess the skill of the dynamic model and derived global radiances. Global bias, uncertainty, and correlation are derived using available modern satellite radiances at moderate spectral resolution. Total chlorophyll, PIC, and the absorption coefficient of CDOC (aCDOC), are simultaneously assimilated to improve the fidelity of the optical constituent fields. A 5-year simulation showed statistically significant (P < 0.05) comparisons of chlorophyll (r = 0.869), PIC (r = 0.868), and a CDOC (r =0.890) with satellite data. Additionally, diatoms (r = 0.890), cyanobacteria (r = 0.732), and coccolithophores (r = 0.716) were significantly correlated with in situ data. Global assimilated distributions of optical constituents were coupled with a radiative transfer model (Ocean-Atmosphere Spectral Irradiance Model, OASIM) to estimate normalized water-leaving radiances at 1 nm for the spectral range 250-800 nm. These unassimilated radiances were within 0.074 mW/sq cm/micron/sr of MODIS-Aqua radiances at 412, 443, 488, 531, 547, and 667 nm. This difference represented a bias of 10.4% (model low). A mean correlation of 0.706 (P < 0.05) was found with global distributions of MODIS radiances. These results suggest skill in the global assimilated model and resulting radiances. The reported error characterization suggests that the global dynamical simulation can support some aspects of mission design and analysis. For example, the high spectral resolution of the simulation supports investigations of band selection. The global nature of the radiance representations supports investigations of satellite observing scenarios. Global radiances at bands not available in current and past missions support investigations of mission capability. PACE, ocean color, water-leaving radiances, biogeochemical model, radiative transfer model

PIC↗
NASA NTRS2000

The Northeast Monsoon's Impact on Mixing, Phytoplankton Biomass and Nutrient Cycling in the Arabian Sea

In the northern Arabian Sea, atmospheric conditions during the Northeast (winter) Monsoon lead to deep convective mixing. Due to the proximity of the permanent pyncnocline to the sea surface, this mixing does not penetrate below 125 m. However, a strong nitracline is also present and the deep convection results in significant nitrate flux into the surface waters. This leads to nitrate concentrations over the upper 100 m that exceed 4 micrometers toward the end of the Monsoon. During the 1994/1995 US JGOFS/Arabian Sea expedition, the mean areal gross primary production over two successive Northeast Monsoons was determined to be 1.35gC/sq m/d. Thus, despite the deep penetrative convection, high rates of primary productivity were maintained. An interdisciplinary model was developed to elucidate the biogeochemical processes involved in supporting the elevated productivity. This model consists of a 1-D mixed-layer model coupled to a set of equations that tracked phytoplankton growth and the concentration of the two major nutrients (nitrate and ammonium). Zooplankton grazing was parameterized by rate constant determined by shipboard experiments. Model boundary conditions consist of meteorological time-series measured from the surface buoy that was part of the ONR Arabian Sea Experiment's central mooring. Our numerical experiments show that elevated surface evaporation, and the associated salinization of the mixed layer, strongly contributes to the frequency and penetration depth of the observed convective mixing. Cooler surface temperatures, increased nitrate entrainment, reduced water column stratification, and lower near-surface chlorophyll a concentrations all result from this enhanced mixing. The model also captured a dependence on regenerated nitrogen observed in nutrient uptake experiments performed during the Northeast Monsoon. Our numerical experiments also indicate that variability in mean pycnocline depth causes up to a 25% reduction in areal chlorophyll a concentration. We hypothesize that such shifts in pycnocline depth may contribute to the interannual variations in primary production and surface chlorophyll a concentration that have been previously observed in this region.

Wiggert, J. D.↗
NASA NTRS2000

BOREAS RSS-8 BIOME-BGC Model Simulations at Tower Flux Sites in 1994

BIOME-BGC is a general ecosystem process model designed to simulate biogeochemical and hydrologic processes across multiple scales (Running and Hunt, 1993). In this investigation, BIOME-BGC was used to estimate daily water and carbon budgets for the BOREAS tower flux sites for 1994. Carbon variables estimated by the model include gross primary production (i.e., net photosynthesis), maintenance and heterotrophic respiration, net primary production, and net ecosystem carbon exchange. Hydrologic variables estimated by the model include snowcover, evaporation, transpiration, evapotranspiration, soil moisture, and outflow. The information provided by the investigation includes input initialization and model output files for various sites in tabular ASCII format.

Hall, Forrest G.↗
NASA NTRS2010

Inferring Properties of Ancient Cyanobacteria from Biogeochemical Activity and Genomes of Siderophilic Cyanobacteria

Interrelationships between life and the planetary system could have simultaneously left landmarks in genomes of microbes and physicochemical signatures in the lithosphere. Verifying the links between genomic features in living organisms and the mineralized signatures generated by these organisms will help to reveal traces of life on Earth and beyond. Among contemporary environments, iron-depositing hot springs (IDHS) may represent one of the most appropriate natural models [1] for insights into ancient life since organisms may have originated on Earth and probably Mars in association with hydrothermal activity [2,3]. IDHS also seem to be appropriate models for studying certain biogeochemical processes that could have taken place in the late Archean and,-or early Paleoproterozoic eras [4, 5]. It has been suggested that inorganic polyphosphate (PPi), in chains of tens to hundreds of phosphate residues linked by high-energy bonds, is environmentally ubiquitous and abundant [6]. Cyanobacteria (CB) react to increased heavy metal concentrations and UV by enhanced generation of PPi bodies (PPB) [7], which are believed to be signatures of life [8]. However, the role of PPi in oxygenic prokaryotes for the suppression of oxidative stress induced by high Fe is poorly studied. Here we present preliminary results of a new mechanism of Fe mineralization in oxygenic prokaryotes, the effect of Fe on the generation of PPi bodies in CB, as well as preliminary analysis of the diversity and phylogeny of proteins involved in the prevention of oxidative stress in phototrophs inhabiting IDHS.

McKay, David S.↗
NASA NTRS1992

Automated in situ observations of upper ocean biogeochemistry, bio-optics, and physics and their potential use for global studies

The processes controlling the flux of carbon in the upper ocean have dynamic ranges in space and time of at least nine orders of magnitude. These processes depend on a broad suite of inter-related biogeochemical, bio-optical, and physical variables. These variables should be sampled on scales matching the relevant phenomena. Traditional ship-based sampling, while critical for detailed and more comprehensive observations, can span only limited portions of these ranges because of logistical and financial constraints. Further, remote observations from satellite platforms enable broad horizontal coverage which is restricted to the upper few meters of the ocean. For these main reasons, automated subsurface measurement systems are important for the fulfillment of research goals related to the regional and global estimation and modeling of time varying biogeochemical fluxes. Within the past few years, new sensors and systems capable of autonomously measuring several of the critical variables have been developed. The platforms for deploying these systems now include moorings and drifters and it is likely that autonomous underwater vehicles (AUV's) will become available for use in the future. Each of these platforms satisfies particular sampling needs and can be used to complement both shipboard and satellite observations. In the present review, (1) sampling considerations will be summarized, (2) examples of data obtained from some of the existing automated in situ sampling systems will be highlighted, (3) future sensors and systems will be discussed, (4) data management issues for present and future automated systems will be considered, and (5) the status of near real-time data telemetry will be outlined. Finally, we wish to make it clear at the outset that the perspectives presented here are those of the authors and are not intended to represent those of the United States JGOFS program, the International JGOFS program, NOAA's C&GC program, or other global ocean programs.

Dickey, Tommy D.↗
NASA NTRS1987

The biogeochemical cycle of the adsorbed template. I - formation of the template

Experimental results are presented for the verification of the first adsorption step of the 'adsorbed template' biogeochemical cycle, a simple model for a primitive prebiotic replication system. The adsorption of Poly-C, Poly-U, Poly-A, Poly-G, and 5'-AMP, 5'-GMP, 5'-CMP and 5'-UMP onto gypsum was studied. It was found that under the conditions of the experiment, the polymers have a very high affinity for the mineral surface, while the monomers adsorb much less efficiently.

Lazard, Daniel↗
NASA NTRS1988

The biogeochemical cycle of the adsorbed template. II - Selective adsorption of mononucleotides on adsorbed polynucleotide templates

Experimental results are presented for the verification of the specific interaction step of the 'adsorbed template' biogeochemical cycle, a simple model for a primitive prebiotic replication system. The experimental system consisted of gypsum as the mineral to which an oligonucleotide template attaches (Poly-C or Poly-U) and (5-prime)-AMP, (5-prime)-GMP, (5-prime)-CMP and (5-prime)-UMP as the interacting biomonomers. When Poly-C or Poly-U were used as adsorbed templates, (5-prime)-GMP and (5-prime)-AMP, respectively, were observed to be the most strongly adsorbed species.

Lazard, Daniel↗
NASA NTRS1991

Applications of the EOS SAR to monitoring global change

The SAR employed by NASA's Earth Observing System (EOS) is a multifrequency multipolarization radar which can conduct global monitoring of geophysical and biophysical parameters. The present discussion of the EOS SAR's role in global monitoring emphasizes geophysical product variables applicable to global hydrologic, biogeochemical, and energy cycle models. EOS SAR products encompass biomass, wetland areas, and phenologic and environmental states, in the field of ecosystem dynamics; soil moisture, snow moisture and extent, and glacier and ice sheet extent and velocity, in hydrologic cycle studies; surface-wave fields and sea ice properties, in ocean/atmosphere circulation; and the topography, erosion, and land forms of the solid earth.

Schier, Marguerite↗
NASA NTRS1991

The role of the EOS SAR in Mission to Planet Earth

The Earth Observing System (EOS) synthetic aperture radar (SAR) is a multifrequency, multipolarization radar which will be capable of the global monitoring of key quantitative measurements of geophysical and biophysical parameters. Scheduled to fly on its own dedicated spacecraft, it is one of three platforms that will make up the space-based component to EOS. The role of the SAR in the EOS mission is discussed, wtih emphasis on the geophysical product variables which will be generated with the SAR and used in global hydrologic, biogeochemical and energy cycle models. The latest concepts for processing the data, including calibration and geophysical processing strategies, are presented.

Holt, Benjamin↗
NASA NTRS2001

Overview and Scientific Agenda of Global Precipitation Mission

This paper addresses the status of the Global Precipitation Mission (GPM) currently planned for launch in the 2007-2008 time frame. The GPM notional design involves a 9-member satellite constellation, one of which wilt be an advanced TRMM-like "core" satellite carrying a dual-frequency Ku-Ka band radar (DFPR) and a TMI-like radiometer. The other eight members of the constellation will be considered daughters of the core satellite, each carrying some type of passive microwave radiometer measuring across the 10.7 - 85 GHz ,frequency range - likely to include a combination of lightweight satellites and co-existing operational/Experimental satellites carrying passive microwave radiometers (i.e., SSM/I and AMSR-E & -F). The constellation is designed to provide no worse than 3-hour sampling at any spot on the globe using sun-synchronous orbit architecture for the daughter satellites, with the core satellite providing relevant measurements on internal cloud-precipitation microphysical processes and the "training-calibrating" information for retrieval algorithms used on daughter satellite measurements. The GPM is organized internationally, currently involving a partnership between NASA in the US, NASDA in Japan, and ESA in Europe (representing the European community nations). The mission is expected to involve additional international participants, sister agencies to the mainstream space agencies, and a diverse collection scientists from academia, government, and the private sector, A critical element in understanding the scientific thinking which has motivated the GPM project is an understanding of what scientific problems TRMM has and has not been able to address and at what scales. The TRMM satellite broke important scientific ground because it carried to space an array of rain-sensitive instruments, two of which were specifically designed for physical precipitation retrieval. These were the 9-channel TRMM Microwave Imager (TMI) and the 13.8 GHz Precipitation Radar (PR). By the same token, because TRMM is a single satellite in a low inclination, low altitude, non-sun-synchronous orbit, it cannot provide global coverage or regular diurnal sampling. These features are essential for many current scientific inquiries involving physical processes of climate and the global water cycle, the modeling of hydrometeorological-biogeochemical cycling, and coupled land-atmosphere/ocean-atmosphere exchanges. Moreover, TRMM has not been able to retrieve explicit properties of the drop size distribution (DSD), a final major barrier to making accurate rain measurements, because the single frequency TRMM radar cannot measure differential reflectivity. which is a minimal requirement for attacking rain retrieval within the framework of extinction cross-section-dependency. GPM is expected to surmount much of the DSD retrieval problem because its core satellite wilt have the capacity to make differential reflectivity measurements with its Ku-Ka band radar (13.6 - 35 GHz) called DFPR - being developed by NASDA/CRL in Japan. This paper will provide an overview of the above issues as well as present a discussion on the expected measurement improvements.

Smith, Eric A.↗
NASA NTRS2018

Carbon-Nitrogen Coupling Under Three Schemes of Model Representation: A Traceability Analysis

The interaction between terrestrial carbon (C) and nitrogen (N) cycles has been incorporated into more and more land surface models. However, the scheme of C-N coupling differs greatly among models, and how these diverse representations of C-N interactions will affect C-cycle modeling remains unclear. In this study, we explored how the simulated ecosystem C storage capacity in the terrestrial ecosystem (TECO) model varied with three different commonly used schemes of C-N coupling. The three schemes (SM1, SM2, and SM3) have been used in three different coupled C-N models (i.e., TECO-CN, CLM 4.5, and O-CN, respectively). They differ mainly in the stoichiometry of C and N in vegetation and soils, plant N uptake strategies, down regulation of photosynthesis, and the pathways of N import. We incorporated the three C-N coupling schemes into the C-only version of the TECO model and evaluated their impacts on the C cycle with a traceability framework. Our results showed that all three of the C-N schemes caused significant reductions in steady-state C storage capacity compared with the C-only version with magnitudes of −23%, −30%, and −54% for SM1, SM2, and SM3, respectively. This reduced C storage capacity was mainly derived from the combined effects of decreases in net primary productivity (NPP; −29%, −15%, and −45%) and changes in mean C residence time (MRT; 9%, −17%, and −17%) for SM1, SM2, and SM3, respectively. The differences in NPP are mainly attributed to the different assumptions on plant N uptake, plant tissue C : N ratio, down regulation of photosynthesis, and biological N fixation. In comparison, the alternative representations of the plant vs. microbe competition strategy and the plant N uptake, combined with the flexible C : N ratio in vegetation and soils, led to a notable spread in MRT. These results highlight the fact that the diverse assumptions on N processes represented by different C-N coupled models could cause additional uncertainty for land surface models. Understanding their difference can help us improve the capability of models to predict future biogeochemical cycles of terrestrial ecosystems.

Du, Zhenggang↗
NASA NTRS1990

Field testing of thermal canopy models in a spruce-fir forest

Recent advances in remote sensing technology allow the use of the thermal infrared region to gain information about vegetative surfaces. Extending existing models to account for thermal radiance transfers within rough forest canopies is of paramount importance. This is so since all processes of interest in the physical climate system and biogeochemical cycles are thermally mediated. Model validation experiments were conducted at a well established boreal forest; northern hardwood forest ecotone research site located in central Maine. Data was collected to allow spatial and temporal validation of thermal models. Emphasis was placed primarily upon enhancing submodels of stomatal behavior, and secondarily upon enhancing boundary layer resistance submodels and accounting for thermal storage in soil and vegetation.

Source record↗
NASA NTRS2005

"Ames Research Center: Linking our Origins to our Future"

Our research traces a path from interstellar materials to inhabited worlds and beyond. We examine how protoplanetary disks evolve and form terrestrial planets, the evolutionary paths of habitable planets, and how external factors (e.g., orbital eccentricity) and internal factors (atmospheric circulation) affect habitability. We trace, spectroscopically and chemically, the evolution of organic molecules from the interstellar medium onto habitable bodies. We examine how membranes might form under prebiotic planetary conditions. We evolve proteins capable of sustaining early metabolism, such as synthesis of biopolymers and transport of ions across membranes. We estimate the frequency of finding a functional prebiotic protein that formed spontaneously. We characterize the formation of diagnostic microbial biosignatures in rock-hosted ecosystems in ophiolite springs as an analog for subsurface life within our solar system, and photosynthetic microbial mats as biota that could be detected on extrasolar planets. We develop quantitative models that simulate energy relationships, biogeochemical cycling, trace gas exchange, and biodiversity. We examine the effects of climate variability on a vegetation-rich biosphere over intermediate time scales, using South American ecosystems as a model. We address natural transport of life beyond its planet of origin, such as on a meteorite, where survivors must withstand radiation, desiccation, and time in transit. We fly organisms and ecosystems in low Earth orbit to test their resistance to space. The Ames E&PO program disseminates these themes to national- and international-scale audiences through partnerships with the California Academy of Sciences, Yellow stone National Park, New York Hall of Science, and several K-14 educational organizations.

DesMarais, David J.↗
NASA NTRS2019

ESD Reviews: Climate Feedbacks in the Earth System and Prospects for Their Evaluation

Earth system models (ESMs) are key tools for providing climate projections under different scenarios of human-induced forcing. ESMs include a large number of additional processes and feedbacks such as biogeochemical cycles that traditional physical climate models do not consider. Yet, some processes such as cloud dynamics and ecosystem functional response still have fairly high uncertainties. In this article, we present an overview of climate feedbacks for Earth system components currently included in state-of-the-art ESMs and discuss the challenges to evaluate and quantify them. Uncertainties in feedback quantification arise from the interdependencies of biogeochemical matter fluxes and physical properties, the spatial and temporal heterogeneity of processes, and the lack of long-term continuous observational data to constrain them. We present an outlook for promising approaches that can help to quantify and to constrain the large number of feedbacks in ESMs in the future. The target group for this article includes generalists with a background in natural sciences and an interest in climate change as well as experts working in interdisciplinary climate research (researchers, lecturers, and students). This study updates and significantly expands upon the last comprehensive overview of climate feedbacks in ESMs, which was produced 15 years ago (NRC, 2003).

Climate feedbacks↗
NASA NTRS2016

2016 International Land Model Benchmarking (ILAMB) Workshop Report

As earth system models (ESMs) become increasingly complex, there is a growing need for comprehensive and multi-faceted evaluation of model projections. To advance understanding of terrestrial biogeochemical processes and their interactions with hydrology and climate under conditions of increasing atmospheric carbon dioxide, new analysis methods are required that use observations to constrain model predictions, inform model development, and identify needed measurements and field experiments. Better representations of biogeochemistryclimate feedbacks and ecosystem processes in these models are essential for reducing the acknowledged substantial uncertainties in 21st century climate change projections.

earth system models (ESMs)↗
NASA NTRSDate not supplied

Nonlinear Plant Responses to Carbon Dioxide and Climate Diminish Water Availability

Water availability for people and its future with global warming is intimately tied to uncertain interactions between the biogeophysical and biogeochemical land responses to enhanced atmospheric carbon dioxide. In particular, research has centered on the question of whether (and by how much) plants will mediate projections of enhanced aridity and drought expected with atmospheric warming. Using an idealized set of Earth System Model (ESM) experiments that decouple the radiative and biogeochemical responses to increased carbon dioxide, we show that ecosystem water use nonlinearly increases across most of the globe under forcing, in spite of increased water use efficiencies attributable to physiological responses to plants. Enhanced ecosystem water consumption is associated with decreased runoff efficiency and soil moisture declines and emerges from nonlinear interactions between the radiative and biogeochemical response of the land surface to increased atmospheric carbon dioxide concentrations, which preferences the partitioning of precipitation to plants, irrespective of precipitation changes. Increased partitioning to runoff is associated with precipitation changes that outpace canopy interception changes. Crucially, our results suggest that within the models, warming and carbon dioxide nonlinearly interact to make plants consume more water rather than save it, with implications for responsible interpretation of drought risks under forcing.

water availability↗