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At least 1,063 records · Page 59
All sourcesNASA NTRSDOE OSTI
DOE OSTI2018

Helicobacter pylori flagellin: TLR5 evasion and fusion-based conversion into a TLR5 agonist

Highlights: • Helicobacter flagellin (hFlg) evades TLR5 by modifying a TLR5-activation hot spot. • The hypervariable domains of hFlg were identified as the soluble part of hFlg. • hFlg was engineered to activate TLR5 through fusion with Bacillus flagellin. Helicobacter pylori is a flagellated bacterium of the Epsilonproteobacteria class that causes peptic ulcers. Flagellin is a primary structural protein that assembles into the flagellar filament. Flagellins from bacteria that belong to the Gammaproteobacteria and Firmicutes groups are detected by Toll-like receptor 5 (TLR5) in the host, triggering the innate immune response, and thus have been studied for the development of vaccines against diverse infections through fusion with protein antigens. However, H. pylori flagellin (hFlg) does not stimulate TLR5, allowing H. pylori to evade TLR5-mediated immune surveillance. The unresponsiveness of TLR5 to hFlg, along with the tendency of the hFlg protein to precipitate, limits the utility of hFlg for H. pylori vaccine development. Here, we report a soluble hFlg derivative protein that activates TLR5. We performed expression and purification screens with full-length and fragment hFlg proteins and identified the hypervariable domains as the soluble part of hFlg. The hypervariable domains of hFlg were engineered into a TLR5 agonist through fusion with the TLR5-activating Bacillus subtilis flagellin. Furthermore, based on comparative sequence and mutation analyses, we reveal that hFlg evolved to evade TLR5 detection by modifying residues that correspond to a TLR5-activation hot spot.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2013

Fatigue cracking of a bare steel first wall in an inertial confinement fusion chamber

Inertial confinement fusion power plants will deposit high energy X-rays onto the outer surfaces of the first wall many times a second for the lifetime of the plant. These X-rays create brief temperature spikes in the first few microns of the wall, which cause an associated highly compressive stress response on the surface of the material. The periodicity of this stress pulse is a concern due to the possibility of fatigue cracking of the wall. We have used finite element analyses to simulate the conditions present on the first wall in order to evaluate the driving force of crack propagation on fusion-facing surface cracks. Analysis results indicate that the X-ray induced plastic compressive stress creates a region of residual tension on the surface between pulses. This tension film will likely result in surface cracking upon repeated cycling. Additionally, the compressive pulse may induce plasticity ahead of the crack tip, leaving residual tension in its wake. However, the stress amplitude decreases dramatically for depths greater than 80–100 μm into the fusion-facing surface. Crack propagation models as well as stress-life estimates agree that even though small cracks may form on the surface of the wall, they are unlikely to propagate further than 100 μm without assistance from creep or grain erosion phenomena.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗
DOE OSTI2014

A review of helium–hydrogen synergistic effects in radiation damage observed in fusion energy steels and an interaction model to guide future understanding

Here, under fusion reactor conditions, large quantities of irradiation defects and transmutation gases are produced per unit time by neutrons, resulting in accelerated degradation of structural candidate ferritic (F) and ferritic/martensitic (F/M) steels. Due to the lack of a suitable fusion neutron testing facility, we must rely on high-dose-rate ion-beam experiments and present-day crude modeling estimates. Of particular interest is the possibility of synergistic (positive feedback) effects on materials properties due to the simultaneous action of He, H, and displacement damage (dpa) during operation. In this paper we discuss the state-of-the-art in terms of the experimental understanding of synergistic effects and carry out simulations of triple-species irradiation under ion-beam conditions using first-of-its-kind modeling techniques. Although, state-of-the-art modeling and simulation is not sufficiently well developed to shed light on the experimental uncertainties, we are able to conclude that it is not clear whether synergistic effects, the evidence of which is still not conclusive, will ultimately play a critical role in material performance under fusion energy conditions. We review here some of the evidence for the synergistic effects of hydrogen in the presence of helium and displacement damage, and also include some recent data from our research. While the experimental results to date suggest possible mechanisms for the observed synergistic effects, it is only with more advanced modeling that we can hope to understand the details underlying the experimental observations. By employing modeling and simulation we propose an interaction model that is qualitatively consistent with experimental observations of dpa/He/H irradiation behavior. Our modeling, the results of which should be helpful to researchers going forward, points to gaps and voids in the current understanding of triple ion-beam irradiation effects (displacement damage produced simultaneously with helium and hydrogen implantation) and the synergistic effects of hydrogen.

36 MATERIALS SCIENCE↗
DOE OSTI2021

Deuterium transport and retention properties of representative fusion blanket structural materials

Reduced activation ferritic-martensitic (RAFM) steels have been developed for decades for use as fusion blanket structural materials, and have advantages in both mechanical properties and irradiation resistance following careful engineering of the microstructure. However, the hydrogen isotope behavior in these proposed fusion structural materials is not well understood, but is important to assess since it impacts the fusion reactor safety and self-sufficient tritium fuel cycle. Here, we investigated deuterium transport and retention in representative advanced RAFM steels, including castable nanostructured alloys (CNAs), and oxide-dispersion-strengthened (ODS) steels. A gas-driven permeation (GDP) system was used to measure the permeability, diffusivity and solubility of the studied materials, covering the temperature range from 623 K to 873 K, and the loading pressures from 1.8 x 10 4 to 1.0 x 10 5 Pa. The results indicated that the deuterium permeability has little material dependence. In contrast, the deuterium diffusivity of the studied materials showed significant variation. The deuterium diffusivity in ODS steels is one order of magnitude lower than that in RAFM steels and CNAs, and correspondingly, have an effective solubility that is 2–10 times larger than RAFM steels and CNAs. In addition, thermal desorption spectroscopy (TDS) measurements were performed to assess the deuterium retention and desorption of these materials following a static thermal deuterium charging at 723 Kfor 1 hour under the deuterium pressure of 1.0 x 10 5 Pa. It was found that ODS steels exhibit the highest deuterium retention and have broader desorption peaks. Microstructural features contributing to deuterium retention and impacting deuterium transport are discussed to rationalize the observed deuterium behavior in the studied RAFM steels.

36 MATERIALS SCIENCE↗
DOE OSTI2012

Microstructural evolution of fusion zone in laser beam welds of pure titanium

Microstructural evolution of fusion zone in laser beam welds of pure titanium was studied by means of electron backscattering diffraction. The microstructural evolution is strongly affected by the {beta} {yields} {alpha} transformation mechanism dependent on the cooling rate during phase transformation. The long-range diffusional transformation mainly occurs in the fusion zone at the low cooling rate, and the massive transformation dominantly takes place at the high cooling rate. For this reason, the grain morphologies probably change from the granular-like to columnar-like grains with the cooling rate increasing. - Highlights: Black-Right-Pointing-Pointer Microstructures of fusion zone in laser beam welds of pure titanium are studied. Black-Right-Pointing-Pointer Increasing cooling rate changes grain morphology from granular to columnar one. Black-Right-Pointing-Pointer Final microstructures depend on the {beta}{yields}{alpha} transformation mechanisms.

36 MATERIALS SCIENCE↗
DOE OSTI2016

Microstructure evolution in the fusion zone of laser-welded Mg–Gd–Y–Zr alloy during solution and aging treatment

The microstructure evolution in the fusion zone of laser-welded Mg-Gd-Y-Zr alloy during solution and aging treatment is investigated. The morphology of the Mg{sub 24}(Gd,Y){sub 5} in the divorced eutectic at the grain boundary transforms from a continuous network to disconnected and fragmentized islands and then to spheroidal particles before complete dissolution during the solution treatment at 430 °C. During the subsequent aging treatment at 225 °C, the precipitation sequence in the fusion zone follows the order of supersaturated solid solution (SSSS) → βʺ(D0{sub 19}) → βʹ(cbco) → β{sub 1}(fcc) → β(fcc). High-density precipitates are present at the original grain boundaries of the fusion zone from the welded structure but there are less precipitates in the interior of the original grains. The grain growth during the solution treatment at 430 °C comprises the slowly increasing stage, rapidly increasing stage, and stable stage. The network-distributed Mg{sub 24}(Gd,Y){sub 5} impedes migration of the grain boundaries, restricts grain growth in the first slowly increasing stage, and segregation of zirconium near the grain boundaries also affects migration of the grain boundaries. - Highlights: •Different quantities of precipitates are present at different location of grain. •The network-distributed Mg{sub 24}(Gd,Y){sub 5} restricts grain growth. •Segregation of Zr affects migration of grain boundaries.

36 MATERIALS SCIENCE↗
DOE OSTI2020

Advancement of LANSCE accelerator facility as a 1-MW Fusion Prototypic Neutron Source

The Fusion Prototypic Neutron Source (FPNS) is considered to be a testbed for scientific understanding of material degradation in future nuclear fusion reactors (Zinkle and Moeslang, 2013; Summary Report on the FPNS Workshop, 2018; Pitcher et al., 2019). The primary mission of FPNS is to provide a damage rate in iron samples of 8-11 dpa/calendar year with He/dpa ratio of 10 appm in irradiation volume of 50 cm 3 or larger with irradiation temperature 300–1000 °C and flux gradient less than 20%/cm in the plane of the sample. The Los Alamos Neutron Science Center (LANSCE) is an attractive candidate for the FPNS project. The Accelerator Facility was designed and operated for an extended period as a 0.8-MW Meson Factory. The existing setup of the LANSCE accelerator complex can nearly fulfill requirements of the fusion neutron source station. The primary function of the upgraded accelerator systems is the safe and reliable delivery of a 1.25-mA continuous proton beam current at 800-MeV beam energy from the switchyard to the target assembly to create 1 MW power of proton beam interacting with a solid tungsten target. The present study describes existing accelerator setup and further development required to meet the needs of FPNS project.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
DOE OSTI2019

Simulation of fusion and quasi-fission in nuclear reactions leading to production of superheavy elements using the Constrained Molecular Dynamics model

Fusion dynamics and the onset of quasi-fission in reactions, leading to production of superheavy nuclei are investigated using the constrained molecular dynamics model. Constraints on the parameters of the nuclear equation of state are derived from experimental fusion probabilities. Here, the obtained constraint on the modulus of incompressibility of nuclear matter K 0 = 240 –260 MeV is consistent with the results of previous study using the Boltzmann-Uehling-Uhlenbeck equation and also with constraints derived using the recent neutron star binary collision event GW170817. Unlike the modulus of incompressibility of symmetric nuclear matter, the stiffness of the density-dependence of symmetry energy influences the fusion probability only weakly.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
DOE OSTI2014

Pandemic H1N1 influenza A directly induces a robust and acute inflammatory gene signature in primary human bronchial epithelial cells downstream of membrane fusion

Pandemic H1N1 influenza A (H1N1pdm) elicits stronger pulmonary inflammation than previously circulating seasonal H1N1 influenza A (sH1N1), yet mechanisms of inflammatory activation in respiratory epithelial cells during H1N1pdm infection are unclear. We investigated host responses to H1N1pdm/sH1N1 infection and virus entry mechanisms in primary human bronchial epithelial cells in vitro. H1N1pdm infection rapidly initiated a robust inflammatory gene signature (3 h post-infection) not elicited by sH1N1 infection. Protein secretion inhibition had no effect on gene induction. Infection with membrane fusion deficient H1N1pdm failed to induce robust inflammatory gene expression which was rescued with restoration of fusion ability, suggesting H1N1pdm directly triggered the inflammatory signature downstream of membrane fusion. Investigation of intra-virion components revealed H1N1pdm viral RNA (vRNA) triggered a stronger inflammatory phenotype than sH1N1 vRNA. Thus, our study is first to report H1N1pdm induces greater inflammatory gene expression than sH1N1 in vitro due to direct virus–epithelial cell interaction. - Highlights: • We investigated H1N1pdm/sH1N1 infection in primary epithelial cells. • H1N1pdm directly initiated a robust inflammatory gene signature, sH1N1 did not. • H1N1pdm viral RNA triggered a stronger response than sH1N1. • H1N1pdm induces greater response due to direct virus–cell interaction. • These results have potential to impact vaccine and therapeutic development.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2015

Contribution of N-linked glycans on HSV-2 gB to cell–cell fusion and viral entry

HSV-2 is the major cause of genital herpes and its infection increases the risk of HIV-1 acquisition and transmission. HSV-2 glycoprotein B together with glycoproteins D, H and L are indispensable for viral entry, of which gB, as a class III fusogen, plays an essential role. HSV-2 gB has seven potential N-linked glycosylation (N-CHO) sites, but their significance has yet to be determined. For the first time, we systematically analyzed the contributions of N-linked glycans on gB to cell–cell fusion and viral entry. Our results demonstrated that, of the seven potential N-CHO sites on gB, mutation at N390, N483 or N668 decreased cell–cell fusion and viral entry, while mutation at N133 mainly affected protein expression and the production of infectious virus particles by blocking the transport of gB from the endoplasmic reticulum to Golgi. Our findings highlight the significance of N-linked glycans on HSV-2 gB expression and function. - Highlights: • N-linked glycan at N133 is important for gB intracellular trafficking and maturation. • N-linked glycans at N390, N483 and N668 on gB are necessary for optimal cell–cell fusion. • N-linked glycans at N390, N483 and N668 on gB are necessary for optimal viral entry.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2016

A high throughput Cre–lox activated viral membrane fusion assay identifies pharmacological inhibitors of HIV entry

Enveloped virus entry occurs when viral and cellular membranes fuse releasing particle contents into the target cell. Human immunodeficiency virus (HIV) entry occurs by cell-free virus or virus transferred between infected and uninfected cells through structures called virological synapses. We developed a high-throughput cell-based assay to identify small molecule inhibitors of cell-free or virological synapse-mediated entry. An HIV clone carrying Cre recombinase as a Gag-internal gene fusion releases active Cre into cells upon viral entry activating a recombinatorial gene switch changing dsRed to GFP-expression. A screen of a 1998 known-biological profile small molecule library identified pharmacological HIV entry inhibitors that block both cell-free and cell-to-cell infection. Many top hits were noted as HIV inhibitors in prior studies, but not previously recognized as entry antagonists. Modest therapeutic indices for simvastatin and nigericin were observed in confirmatory HIV infection assays. This robust assay is adaptable to study HIV and heterologous viral pseudotypes. - Highlights: • Cre recombinase viral fusion assay screens cell-free or cell–cell entry inhibitors. • This Gag-iCre based assay is specific for the entry step of HIV replication. • Screened a library of known pharmacologic compounds for HIV fusion antagonists. • Many top hits were previously noted as HIV inhibitors, but here are classified as entry antagonists. Many top hits were previously noted as HIV inhibitors, but not as entry antagonists. • The assay is compatible with pseudotyping with HIV and heterologous viruses.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2018

Significantly Enhanced Emission Stability of CsPbBr 3 Nanocrystals via Chemically Induced Fusion Growth for Optoelectronic Devices

Lead–halide perovskite nanocrystals (PNCs) have attracted much attention in recent years due to their outstanding optical properties. We report here a new chemical route for triggering postsynthetic growth of CsPbBr 3 PNCs at room temperature via intentional depletion of stabilizing ligands, resulting in an immediate fusion growth of the as-synthesized PNCs. Upon fusion, the CsPbBr 3 PNCs can grow from ca. 8 nm to ca. 60 nm in lateral dimensions in 48 h, reaching about 14 nm in thickness. More importantly, it was found that the fused PNCs have significantly enhanced optical properties. They showed an exceptionally higher stability to photodegradation. They also displayed sharper emission lines and a higher quantum yield, contrary to the fact that the nanocrystals are much larger. The much-improved optical properties are attributed to the Ruddlesden–Popper (RP) planar faults formed during the fusion process and observed using atomic resolution scanning transmission electron microscopy, which are predicted to result in quantum confinement based on density-functional theory calculations. The newly grown nanocrystals with RP defects are expected to significantly improve light emission properties of the PNCs and find applications in light-emitting diodes and other optoelectronic devices.

36 MATERIALS SCIENCE↗
DOE OSTI2016

Fission and fusion scenarios for magnetic microswimmer clusters

Fission and fusion processes of particle clusters occur in many areas of physics and chemistry from subnuclear to astronomic length scales. Here we study fission and fusion of magnetic microswimmer clusters as governed by their hydrodynamic and dipolar interactions. Rich scenarios are found that depend crucially on whether the swimmer is a pusher or a puller. In particular a linear magnetic chain of pullers is stable while a pusher chain shows a cascade of fission (or disassembly) processes as the self-propulsion velocity is increased. Contrarily, magnetic ring clusters show fission for any type of swimmer. Moreover, we find a plethora of possible fusion (or assembly) scenarios if a single swimmer collides with a ringlike cluster and two rings spontaneously collide. Lastly, our predictions are obtained by computer simulations and verifiable in experiments on active colloidal Janus particles and magnetotactic bacteria.

36 MATERIALS SCIENCE↗
DOE OSTI2015

Crystal structure of the conserved herpesvirus fusion regulator complex gH—gL

Herpesviruses, which cause many incurable diseases, infect cells by fusing viral and cellular membranes. Whereas most other enveloped viruses use a single viral catalyst called a fusogen, herpesviruses, inexplicably, require two conserved fusion-machinery components, gB and the heterodimer gH–gL, plus other nonconserved components. gB is a class III viral fusogen, but unlike other members of its class, it does not function alone. We determined the crystal structure of the gH ectodomain bound to gL from herpes simplex virus 2. gH–gL is an unusually tight complex with a unique architecture that, unexpectedly, does not resemble any known viral fusogen. Instead, we propose that gH–gL activates gB for fusion, possibly through direct binding. Formation of a gB–gH–gL complex is critical for fusion and is inhibited by a neutralizing antibody, making the gB–gH–gL interface a promising antiviral target.

Chowdary, Tirumala K.↗
DOE OSTI2019

Dynamics of pore formation during laser powder bed fusion additive manufacturing

Abstract Laser powder bed fusion additive manufacturing is an emerging 3D printing technique for the fabrication of advanced metal components. Widespread adoption of it and similar additive technologies is hampered by poor understanding of laser-metal interactions under such extreme thermal regimes. Here, we elucidate the mechanism of pore formation and liquid-solid interface dynamics during typical laser powder bed fusion conditions using in situ X-ray imaging and multi-physics simulations. Pores are revealed to form during changes in laser scan velocity due to the rapid formation then collapse of deep keyhole depressions in the surface which traps inert shielding gas in the solidifying metal. We develop a universal mitigation strategy which eliminates this pore formation process and improves the geometric quality of melt tracks. Our results provide insight into the physics of laser-metal interaction and demonstrate the potential for science-based approaches to improve confidence in components produced by laser powder bed fusion.

36 MATERIALS SCIENCE↗
DOE OSTI2022

Cooperative multivalent receptor binding promotes exposure of the SARS-CoV-2 fusion machinery core

The molecular events that permit the spike glycoprotein of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) to bind and enter cells are important to understand for both fundamental and therapeutic reasons. Spike proteins consist of S1 and S2 domains, which recognize angiotensin-converting enzyme 2 (ACE2) receptors and contain the viral fusion machinery, respectively. Ostensibly, the binding of spike trimers to ACE2 receptors promotes dissociation of the S1 domains and exposure of the fusion machinery, although the molecular details of this process have yet to be observed. We report the development of bottom-up coarse-grained (CG) models consistent with cryo-electron tomography data, and the use of CG molecular dynamics simulations to investigate viral binding and S2 core exposure. We show that spike trimers cooperatively bind to multiple ACE2 dimers at virion-cell interfaces in a manner distinct from binding between soluble proteins, which processively induces S1 dissociation. We also simulate possible variant behavior using perturbed CG models, and find that ACE2-induced S1 dissociation is primarily sensitive to conformational state populations and the extent of S1/S2 cleavage, rather than ACE2 binding affinity. These simulations reveal an important concerted interaction between spike trimers and ACE2 dimers that primes the virus for membrane fusion and entry.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2022

Exchange controlled triplet fusion in metal–organic frameworks

Abstract Triplet-fusion-based photon upconversion holds promise for a wide range of applications, from photovoltaics to bioimaging. The efficiency of triplet fusion, however, is fundamentally limited in conventional molecular and polymeric systems by its spin dependence. Here, we show that the inherent tailorability of metal–organic frameworks (MOFs), combined with their highly porous but ordered structure, minimizes intertriplet exchange coupling and engineers effective spin mixing between singlet and quintet triplet–triplet pair states. We demonstrate singlet–quintet coupling in a pyrene-based MOF, NU-1000. An anomalous magnetic field effect is observed from NU-1000 corresponding to an induced resonance between singlet and quintet states that yields an increased fusion rate at room temperature under a relatively low applied magnetic field of 0.14 T. Our results suggest that MOFs offer particular promise for engineering the spin dynamics of multiexcitonic processes and improving their upconversion performance.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2019

Direct observation of ion acceleration from a beam-driven wave in a magnetic fusion experiment

According to the article, efficiently heating a magnetically confined plasma to thermonuclear temperatures remains a central issue in fusion energy research. One well-established technique is to inject beams of neutral particles into the plasma, a process known as neutral beam injection. In the classical picture, fast ions generated from neutral beam injection predominantly heat electrons as they are slowed by friction. This electron heat is then collisionally coupled to the plasma ions, which comprise the fusion fuel. Fast ions can also drive plasma waves, which divert energy from the fuel and can degrade confinement. Here we present new observations from a field reversed configuration plasma in which a beam-driven wave in the open field line region couples directly to fuel ions, drawing a high-energy tail on subcollisional timescales that dramatically enhances the fusion rate. This mode therefore allows the beam energy to bypass the electron channel and does so without having a deleterious effect on global plasma confinement. Our results demonstrate a means of directly and non-destructively coupling energy from fast ions to plasma ions, which may pave the way for improved neutral beam injection heating efficiency or the prevention of ash accumulation with alpha channelling.

Physics↗