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At least 1,063 records · Page 59

Computer-aided boundary delineation of agricultural lands

The National Agricultural Statistics Service of the United States Department of Agriculture (USDA) presently uses labor-intensive aerial photographic interpretation techniques to divide large geographical areas into manageable-sized units for estimating domestic crop and livestock production. Prototype software, the computer-aided stratification (CAS) system, was developed to automate the procedure, and currently runs on a Sun-based image processing system. With a background display of LANDSAT Thematic Mapper and United States Geological Survey Digital Line Graph data, the operator uses a cursor to delineate agricultural areas, called sampling units, which are assigned to strata of land-use and land-cover types. The resultant stratified sampling units are used as input into subsequent USDA sampling procedures. As a test, three counties in Missouri were chosen for application of the CAS procedures. Subsequent analysis indicates that CAS was five times faster in creating sampling units than the manual techniques were.

Cheng, Thomas D.↗

Simulating transitional flow and heat transfer over the flat plate and circular cylinder using a K-epsilon turbulence model

A boundary layer computer code, called TEXSTAN, has been used to simulate external, transitional, fluid flow and heat transfer over the flat plate and circular cylinder. Turbulence modeling was accomplished by using a low-Reynolds number K-epsilon turbulence model. The study was made for free-stream turbulence intensities less than 15 percent. The comparison of the flat plate heat transfer predictions to experimental data showed good agreement, for the location of transition as well as in the heat transfer coefficient. The typical discrepancy in predicting the heat transfer coefficient was less than 5 percent of the measured value.

Sullivan, T. J.↗

Airborne gamma radiation measurements of soil moisture during FIFE: Activities and results

Soil moisture measurements were obtained during the summer of 1987 and 1989 near Manhattan, Kansas, using the National Weather Service (NWS) airborne gamma radiation system. A network of 24 flight lines were established over the research area. Airborne surveys were flown daily during two intensive field campaigns. The data collected was sufficient to modify the NWS standard operational method for estimating soil moisture for the Field Experiment (FIFE) flight lines. The average root mean square error of the soil moisture estimates for shorter FIFE flight lines was found to be 2.5 percent, compared with a reported value of 3.9 percent for NWS flight lines. Techniques were developed to compute soil moisture estimates for portions of the flight lines. Results of comparisons of the airborne gamma radiation soil moisture estimates with those obtained using the NASA Pushbroom Microwave Radiation (PBMR) system and hydrological model are presented. The airborne soil moisture measurements, and real averages computed using all remotely sensed and ground data, have been in support of the research of the many FIFE investigators whose overall goal was the upscale integration of models and the application of satellite remote sensing.

Peck, Eugene L.↗

Incorporation of an evaporative cooling scheme into a dynamic model of orographic precipitation

A simple evaporative cooling scheme was incorporated into a dynamic model to estimate orographic precipitation in mountainous regions. The orographic precipitation model is based on the transport of atmospheric moisture and the quantification of preciptable water across a 3D representation of the terrain from the surface up to 250 hPa. Advective wind fields are computed independently and boundary conditions are extracted from radiosonde data. Precipitation rates are obtained through calibration of a spatially distributed precipitation efficiency parameter. The model was applied to the central Sierra Nevada. Results show a gain of the order of 20% in threat-score coefficients designed to measure the forecast ability of the model. Accuracy gains are largest at high elevations and during intense storms associated with warm air masses.

Barros, Ana Paula↗

Implications of the BATSE data for a helocentric origin of gamma-ray bursts

Several possible models have been suggested to explain the observed distribution of gamma-ray bursts: heliocentric distributions such as the Oort cloud, large galactic halos, and cosmological models. We report here on an investigation into the implications of the Burst and Transient Source Experiment (BATSE) gamma-ray burst distribution (Meegan et al. 1992a) data on the possible helocentric origin of gamma-ray bursts. We find no statistically significant anisotropy in the angular distribution of the bursts in a Sun-referenced coordinate system; there is no dipole moment in the direction of the Sun, and no quardrupole moment associated with the ecliptic plane. We have employed direct analytic calculations and Monte Carlo simulations of sources in the Oort cloud to constrain possible helicentric burst distributions. These can produce distributions consistent with the observed angular isotropy, the meal value of V/V(sub max), and the observed C/C(sub min) distribution of BATSE, and provide limits to burst energy of a few times approximately 10(exp 27) ergs. However, the agreement of the heliocentric C/C(sub min) distributions with the BATSE data is attributable to the relatively limited sampling of strong, nearby bursts. These bursts are known from observation to be homogeneously distributed, yet the density of sources in the Oort cloud is not constant in this region. Integral number-intensity distributions from the Oort cloud for larger numbers of bursts cannot reproduce the known homogeneity of the strong bursts without modification to the computed cometary number density and are therefore unlikely explanations of the gamma-ray burst distribution.

Horack, J. M.↗

Modeling of collision-induced infrared absorption spectra of H2 pairs in the first overtone band at temperatures from 20 to 500 K

A simple formalism is presented that permits quick computations of the low-resolution, rotovibrational collision-induced absorption (RV CIA) spectra of H2 pairs in the first overtone band of hydrogen, at temperatures from 20 to 500 K. These spectra account for the free-free transitions. The sharp dimer features, originating from the bound-free, free-bound, and bound-bound transitions are ignored, though their integrated intensities are properly accounted for. The method employs spectral model line- shapes with parameters computed from the three lowest spectral moments. The moments are obtained from first principles expressed as analytical functions of temperature. Except for the sharp dimer features, which are absent in this model, the computed spectra reproduce closely the results of exact quantum mechanical lineshape computations. Comparisons of the computed spectra with existing experimental data also show good agreement. The work interest for the modeling of the atmospheres of the outer planets in the near-infrared region of the spectrum. The user-friendly Fortran program developed here is available on request from the authors.

Zheng, Chunguang↗

Basophile: Accurate Fragment Charge State Prediction Improves Peptide Identification Rates

In shotgun proteomics, database search algorithms rely on fragmentation models to predict fragment ions that should be observed for a given peptide sequence. The most widely used strategy (Naive model) is oversimplified, cleaving all peptide bonds with equal probability to produce fragments of all charges below that of the precursor ion. More accurate models, based on fragmentation simulation, are too computationally intensive for on-the-fly use in database search algorithms. We have created an ordinal-regression-based model called Basophile that takes fragment size and basic residue distribution into account when determining the charge retention during CID/higher-energy collision induced dissociation (HCD) of charged peptides. This model improves the accuracy of predictions by reducing the number of unnecessary fragments that are routinely predicted for highly-charged precursors. Basophile increased the identification rates by 26% (on average) over the Naive model, when analyzing triply-charged precursors from ion trap data. Basophile achieves simplicity and speed by solving the prediction problem with an ordinal regression equation, which can be incorporated into any database search software for shotgun proteomic identification.

59 BASIC BIOLOGICAL SCIENCES↗

Prediction of electric and magnetic fields from spectral data using machine learning algorithms for Doppler-free saturation spectroscopy diagnostics

The prediction of electric and magnetic field amplitudes from atomic spectral data is critical for plasma control in fusion devices such as tokamaks. Conventional approaches that rely on physics-based models are computationally expensive and unsuitable for real-time applications. In this work, we develop and benchmark three machine learning algorithms—simulation-based inference (SBI), fully connected neural networks (FCNN), and histogram-based gradient boosting regression (GBR-Hist)—to infer field intensities directly from Doppler-free saturation spectroscopy (DFSS) spectra. Synthetic datasets of spectra were generated using the EZSSS code and evaluated both with and without added Poisson noise to mimic experimental conditions. We find that SBI achieves the highest accuracy and robustness, FCNN provides a strong balance of accuracy and computational efficiency for real-time applications, and GBR-Hist offers the fastest inference but is more sensitive to noise. Furthermore, these results demonstrate the potential of machine learning to accelerate DFSS analysis and enhance its utility for plasma diagnostics and control.

Doppler-free saturation spectroscopy↗

Role of belly board device in the age of intensity modulated radiotherapy for pelvic irradiation

Small bowel dose often represents a limiting factor for radiation treatment of pelvic malignancies. To reduce small bowel toxicity, a belly board device (BBD) with a prone position is often recommended. Intensity modulated radiotherapy (IMRT) could reduce dose to small bowel based on the desired dose-volume constraints. We investigated the efficacy of BBD in conjunction with IMRT. A total of 11 consecutive patients with the diagnosis of rectal cancer, who were candidates for definitive therapy, were selected. Patients were immobilized with BBD in prone position for simulation and treatment. Supine position computed tomography (CT) data were either acquired at the same time or during a diagnostic scan, and if existed was used. Target volumes (TV) as well as organs at risk (OAR) were delineated in both studies. Three-dimensional conformal treatment (3DCRT) and IMRT plans were made for both scans. Thus for each patient, 4 plans were generated. Statistical analysis was conducted for maximum, minimum, and mean dose to each structure. When comparing the normalized mean Gross TV dose for the different plans, there was no statistical difference found between the planning types. There was a significant difference in small bowel sparing when using prone position on BBD comparing 3DCRT and IMRT plans, favoring IMRT with a 29.6% reduction in dose (p = 0.007). There was also a statistically significant difference in small bowel sparing when comparing supine position IMRT to prone-BBD IMRT favoring prone-BBD IMRT with a reduction of 30.3% (p = 0.002). For rectal cancer when small bowel could be a limiting factor, prone position using BBD along with IMRT provides the best sparing. We conclude that whenever a dose escalation in rectal cancer is desired where small bowel could be limiting factor, IMRT in conjunction with BBD should be selected.

61 RADIATION PROTECTION AND DOSIMETRY↗

Scalable Optimization Methods for Distribution Networks With High PV Integration

Here this paper proposes a suite of algorithms to determine the active- and reactive-power setpoints for photovoltaic (PV) inverters in distribution networks. The objective is to optimize the operation of the distribution feeder according to a variety of performance objectives and ensure voltage regulation. In general, these algorithms take a form of the widely studied ac optimal power flow (OPF) problem. For the envisioned application domain, nonlinear power-flow constraints render pertinent OPF problems nonconvex and computationally intensive for large systems. To address these concerns, we formulate a quadratic constrained quadratic program (QCQP) by leveraging a linear approximation of the algebraic power-flow equations. Furthermore, simplification from QCQP to a linearly constrained quadratic program is provided under certain conditions. The merits of the proposed approach are demonstrated with simulation results that utilize realistic PV-generation and load-profile data for illustrative distribution-system test feeders.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Sampling Approaches for Multi-Domain Internet Performance Measurement Infrastructures

The next-generation of high-performance networks being developed in DOE communities are critical for supporting current and emerging data-intensive science applications. The goal of this project is to investigate multi-domain network status sampling techniques and tools to measure/analyze performance, and thereby provide “network awareness” to end-users and network operators in DOE communities. We leverage the infrastructure and datasets available through perfSONAR, which is a multi-domain measurement framework that has been widely deployed in high-performance computing and networking communities; the DOE community is a core developer and the largest adopter of perfSONAR. Our investigations include development of semantic scheduling algorithms, measurement federation policies, and tools to sample multi-domain and multi-layer network status within perfSONAR deployments. We validate our algorithms and policies with end-to-end measurement analysis tools for various monitoring objectives such as network weather forecasting, anomaly detection, and fault-diagnosis. In addition, we develop a multi-domain architecture for an enterprise-specific perfSONAR deployment that can implement monitoring-objective based sampling and that adheres to any domain-specific measurement policies.

97 MATHEMATICS AND COMPUTING↗

Reviews and syntheses: Opportunities for robust use of peak intensities from high-resolution mass spectrometry in organic matter studies

Abstract. Earth's biogeochemical cycles are intimately tied to the biotic and abiotic processing of organic matter (OM). Spatial and temporal variations in OM chemistry are often studied using direct infusion, high-resolution Fourier transform mass spectrometry (FTMS). An increasingly common approach is to use ecological metrics (e.g., within-sample diversity) to summarize high-dimensional FTMS data, notably Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS). However, problems can arise when FTMS peak-intensity data are used in a way that is analogous to abundances in ecological analyses (e.g., species abundance distributions). Using peak-intensity data in this way requires the assumption that intensities act as direct proxies for concentrations. Here, we show that comparisons of the same peak across samples (within-peak) may carry information regarding variations in relative concentration, but comparing different peaks (between-peak) within or between samples does not. We further developed a simulation model to study the quantitative implications of using peak intensities to compute ecological metrics (e.g., intensity-weighted mean properties and diversity) that rely on information about both within-peak and between-peak shifts in relative abundance. We found that, despite analytical limitations in linking concentration to intensity, ecological metrics often perform well in terms of providing robust qualitative inferences and sometimes quantitatively accurate estimates of diversity and mean molecular characteristics. We conclude with recommendations for the robust use of peak intensities for natural organic matter studies. A primary recommendation is the use and extension of the simulation model to provide objective guidance on the degree to which conceptual and quantitative inferences can be made for a given analysis of a given dataset. Broad use of this approach can help ensure rigorous scientific outcomes from the use of FTMS peak intensities in environmental applications.

54 ENVIRONMENTAL SCIENCES↗

Development and usage of a false color display technique for presenting Seasat-A scatterometer data

A computer generated false color program which creates digital multicolor graphics to display geophysical surface parameters measured by the Seasat-A satellite scatterometer (SASS) is described. The data is incrementally scaled over the range of acceptable values and each increment and its data points are assigned a color. The advantage of the false color display is that it visually infers cool or weak data versus hot or intense data by using the rainbow of colors. For example, with wind speeds, levels of yellow and red could be used to imply high winds while green and blue could imply calmer air. The SASS data is sorted into geographic regions and the final false color images are projected onto various world maps with superimposed land/water boundaries.

Jackson, C. B.↗

Comparison of Turbulent Thermal Diffusivity and Scalar Variance Models

In this study, several variable turbulent Prandtl number formulations are examined for boundary layers, pipe flow, and axisymmetric jets. The model formulations include simple algebraic relations between the thermal diffusivity and turbulent viscosity as well as more complex models that solve transport equations for the thermal variance and its dissipation rate. Results are compared with available data for wall heat transfer and profile measurements of mean temperature, the root-mean-square (RMS) fluctuating temperature, turbulent heat flux and turbulent Prandtl number. For wall-bounded problems, the algebraic models are found to best predict the rise in turbulent Prandtl number near the wall as well as the log-layer temperature profile, while the thermal variance models provide a good representation of the RMS temperature fluctuations. In jet flows, the algebraic models provide no benefit over a constant turbulent Prandtl number approach. Application of the thermal variance models finds that some significantly overpredict the temperature variance in the plume and most underpredict the thermal growth rate of the jet. The models yield very similar fluctuating temperature intensities in jets from straight pipes and smooth contraction nozzles, in contrast to data that indicate the latter should have noticeably higher values. For the particular low subsonic heated jet cases examined, changes in the turbulent Prandtl number had no effect on the centerline velocity decay.

computational fluid dynamics↗

Modeling and control for closed environment plant production systems

A computer program was developed to study multiple crop production and control in controlled environment plant production systems. The program simulates crop growth and development under nominal and off-nominal environments. Time-series crop models for wheat (Triticum aestivum), soybean (Glycine max), and white potato (Solanum tuberosum) are integrated with a model-based predictive controller. The controller evaluates and compensates for effects of environmental disturbances on crop production scheduling. The crop models consist of a set of nonlinear polynomial equations, six for each crop, developed using multivariate polynomial regression (MPR). Simulated data from DSSAT crop models, previously modified for crop production in controlled environments with hydroponics under elevated atmospheric carbon dioxide concentration, were used for the MPR fitting. The model-based predictive controller adjusts light intensity, air temperature, and carbon dioxide concentration set points in response to environmental perturbations. Control signals are determined from minimization of a cost function, which is based on the weighted control effort and squared-error between the system response and desired reference signal.

NASA Discipline Life Support Systems↗

TU-A-12A-10: Robust Radiomics Feature Quantification Using Semiautomatic Volumetric Segmentation

Purpose: Recent advances in medical imaging technologies provide opportunities to quantify the tumor phenotype throughout the course of treatment non-invasively. The emerging field of Radiomics addresses this by converting medical images into minable data by applying a large number of quantitative imaging algorithms. Accurate tumor segmentation is one of the main challenges of Radiomics. It has been shown that semiautomatic segmentation approaches efficiently reduce inter-observer variability as compared to the time consuming manual delineations. In this study, a semiautomatic volumetric segmentation algorithm, implemented in the free and publicly available 3D-Slicer platform, was investigated in terms of its robustness for Radiomics features quantification. Methods: Fifty-six 3D-Radiomics features, quantifying phenotypic differences based on the tumor intensity, shape and texture, were extracted from the computed tomography images of twenty lung cancer patients. These Radiomics features were derived from the 3D-tumor volumes defined by three independent observers twice using 3D-Slicer, and compared to manual slice-by-slice delineations of five independent physicians in terms of intra-class correlation coefficient (ICC) and feature range. Results: Radiomics features extracted from 3D-Slicer segmentations had significantly higher reproducibility (ICC= 0.85 0.15, p=0.0009) compared to the features extracted from the manual segmentations (ICC= 0.77 0.17). Furthermore, the features extracted from 3D-Slicer based segmentations, spread over significantly smaller range across observers as compared to those of the manual delineations (p= 3.819e-07). Moreover, the features derived from 3D-Slicer segmentations overlapped in range with those of the manual delineations, as the lower(higher) limit(s) being significantly higher(lower) for the 3D-Slicer features (p= 0.007, p= 5.863e-06). Conclusion: 3D-Slicer based semiautomatic segmentation significantly improves the robustness of radiomics features and thus could serve as a potential alternative to the time consuming manual segmentation process. So 3D-Slicer can have a large application in Radiomics, and be employed for high-throughput data mining research of medical imaging in clinical oncology.

60 APPLIED LIFE SCIENCES↗

Sinogram restoration in computed tomography with an edge-preserving penalty

Purpose: With the goal of producing a less computationally intensive alternative to fully iterative penalized-likelihood image reconstruction, our group has explored the use of penalized-likelihood sinogram restoration for transmission tomography. Previously, we have exclusively used a quadratic penalty in our restoration objective function. However, a quadratic penalty does not excel at preserving edges while reducing noise. Here, we derive a restoration update equation for nonquadratic penalties. Additionally, we perform a feasibility study to extend our sinogram restoration method to a helical cone-beam geometry and clinical data. Methods: A restoration update equation for nonquadratic penalties is derived using separable parabolic surrogates (SPS). A method for calculating sinogram degradation coefficients for a helical cone-beam geometry is proposed. Using simulated data, sinogram restorations are performed using both a quadratic penalty and the edge-preserving Huber penalty. After sinogram restoration, Fourier-based analytical methods are used to obtain reconstructions, and resolution-noise trade-offs are investigated. For the fan-beam geometry, a comparison is made to image-domain SPS reconstruction using the Huber penalty. The effects of varying object size and contrast are also investigated. For the helical cone-beam geometry, we investigate the effect of helical pitch (axial movement/rotation). Huber-penalty sinogram restoration is performed on 3D clinical data, and the reconstructed images are compared to those generated with no restoration. Results: We find that by applying the edge-preserving Huber penalty to our sinogram restoration methods, the reconstructed image has a better resolution-noise relationship than an image produced using a quadratic penalty in the sinogram restoration. However, we find that this relatively straightforward approach to edge preservation in the sinogram domain is affected by the physical size of imaged objects in addition to the contrast across the edge. This presents some disadvantages of this method relative to image-domain edge-preserving methods, although the computational burden of the sinogram-domain approach is much lower. For a helical cone-beam geometry, we found applying sinogram restoration in 3D was reasonable and that pitch did not make a significant difference in the general effect of sinogram restoration. The application of Huber-penalty sinogram restoration to clinical data resulted in a reconstruction with less noise while retaining resolution. Conclusions: Sinogram restoration with the Huber penalty is able to provide better resolution-noise performance than restoration with a quadratic penalty. Additionally, sinogram restoration with the Huber penalty is feasible for helical cone-beam CT and can be applied to clinical data.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Chatter detection in simulated machining data: a simple refined approach to vibration data

Vibration monitoring is a critical aspect of assessing the health and performance of machinery and industrial processes. This study explores the application of machine learning techniques, specifically the Random Forest (RF) classification model, to predict and classify chatter—a detrimental self-excited vibration phenomenon—during machining operations. While sophisticated methods have been employed to address chatter, this research investigates the efficacy of a novel approach to an RF model. The study leverages simulated vibration data, bypassing resource-intensive real-world data collection, to develop a versatile chatter detection model applicable across diverse machining configurations. The feature extraction process combines time-series features and Fast Fourier Transform (FFT) data features, streamlining the model while addressing challenges posed by feature selection. By focusing on the RF model’s simplicity and efficiency, this research advances chatter detection techniques, offering a practical tool with improved generalizability, computational efficiency, and ease of interpretation. The study demonstrates that innovation can reside in simplicity, opening avenues for wider applicability and accelerated progress in the machining industry.

42 ENGINEERING↗