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At least 1,063 records · Page 59
All sourcesNASA NTRSDOE OSTI
DOE OSTI2026

dSph-obic dark matter

We present a mechanism that allows thermal relic dark matter to annihilate efficiently in the Galactic Halo and in galaxy clusters, but not in the lower-velocity environments of dwarf spheroidal (dSph) galaxies. We realize this within a complete model in which the dark matter consists of two distinct states separated by a small mass splitting. An indirect detection signal is generated only through the coannihilations of these two states, requiring both to be present. In the halo of the Milky Way, the dark matter particles in the lighter state can be excited into the long-lived heavier state through scattering. Once excited, these heavier particles can coannihilate with those in the lighter state, yielding a gamma-ray signal with little or no suppression. By contrast, the dark matter particles in dwarf galaxies do not possess enough kinetic energy to be excited, thereby suppressing the coannihilation rate and corresponding indirect detection signals from those systems. This framework breaks the predictive relationship that ordinarily exists between these respective gamma-ray signals and complicates our ability to interpret the results of indirect detection searches.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
NASA NTRS1973

Analysis of usefulness of ERTS-1 MSS data in detecting and measuring coastal marshes

The author has identified the following significant results. The usefulness of ERTS-1 data in detecting and measuring coastal marshes has been analyzed. The data chosen for study was taken over the Houston Area Test Site on August 29, 1972. A study site was selected which contained marshes of varying size. Using a computerized clustering algorithm which groups areas of spectral homogeneity, it was possible to distinguish twenty-five classes or features. To determine the total acreage of the marshes, the pure picture elements were counted. Using a technique developed by the team, the boundary picture elements were also counted. Ground truth was provided from rectified, enlarged, and scaled high altitude aircraft photography acquired during the same time frame. Comparison of the ground truth coverage depicted by the aircraft photography to the clustering acreage displayed from the ERTS-1 data showed a percentage of accuracy ranging from 89% to 99% for determining areal extent of coastal marshes.

Erb, R. B.↗
NASA NTRS1988

Complete positive ion, electron, and ram negative ion measurements near Comet Halley (COPERNIC) plasma experiment for the European Giotto Mission

Participation of U.S. scientists on the COPERNIC (COmplete Positive ions, Electrons and Ram Negative Ion measurements near Comet Halley) plasma experiment on the Giotto mission is described. The experiment consisted of two detectors: the EESA (electron electrostatic analyzer) which provided three-dimensional measurements of the distribution of electrons from 10 eV to 30 keV, and the PICCA (positive ion cluster composition analyzer) which provided mass analysis of positively charged cold cometary ions from mass 10 to 210 amu. In addition, a small 3 deg wide sector of the EESA looking in the ram direction was devoted to the detection of negatively charged cold cometary ions. Both detectors operated perfectly up to near closest approach (approx. 600 km) to Halley, but impacts of dust particles and neutral gas on the spacecraft contaminated parts of the data during the last few minutes. Although no flight hardware was fabricated in the U.S., The U.S. made very significant contributions to the hardware design, ground support equipment (GSE) design and fabrication, and flight and data reduction software required for the experiment, and also participated fully in the data reduction and analysis, and theoretical modeling and interpretation. Cometary data analysis is presented.

Lin, Robert P.↗
DOE OSTI2020

Activated KCNQ1 channel promotes fibrogenic response in hereditary gingival fibromatosis via clustering and activation of Ras

Abstract Background and Objective Activated potassium channels were found to be strongly correlated with gingival overgrowth (GO) phenotype as we reviewed syndromic hereditary gingival fibromatosis (HGF). Nevertheless, the functional roles of potassium channels in gingival fibrosis or gingival overgrowth remained uncovered. The aim of the present study was to explore the pathogenic role of aberrantly activated potassium channel in Hereditary Gingival Fibromatosis (HGF). Methods Gingival tissues were collected from 9 HGF patients and 15 normal controls. Expression of KCNQ1 was detected by immunohistochemistry. Gingival fibroblasts were isolated, and outward K + currents were detected by whole‐cell patch‐clamp analysis, transmembrane potential was determined by flow cytometry. Normal human gingival fibroblasts (NHGFs) were transfected with KCNQ1 adenovirus or treated with KCNQ1 selective agonist ML277 and antagonist chromanol 293B. Accumulation of Extracellular Matrix (ECM) was measured by Western blotting and Sircol Soluble Collagen Assay. Content of secreted TGF‐β1 was measured by ELISA. Active RAS pull‐down assay and cell immunofluorescence were utilized to verify RAS activation. Results KCNQ1 was upregulated in gingival tissues derived from HGF patients and HGF gingival fibroblasts presented increased outward K + currents than NHGFs. Overexpression of KCNQ1, or KCNQ1 agonist ML277, promoted fibrotic responses of NHGFs. TGF‐β1 and KCNQ1 channels formed a positive feed‐back loop. ML277 generated lateral clustering and activation of Ras on plasma membrane, followed by augmented MAPK/AP‐1 signaling pathway output. JNK or ERK1/2 inhibitors suppressed ML277‐induced AP‐1 and ECM upregulation. Conclusion Activation of KCNQ1 potassium channel promoted fibrogenic responses in NHGFs via Ras/MAPK/AP‐1 signaling.

Gao, Qian↗
DOE OSTI2021

Correlative STEM-APT characterization of radiation-induced segregation and precipitation of in-service BWR 304 stainless steel

In this study, radiation induced segregation and precipitation phenomena in an in-service boiling water reactor 304 stainless steel component were investigated using directly correlated 3D-atom probe tomography and scanning transmission electron microscopy. Significant quantitative differences in measured segregation at grain boundaries were found between the atom probe and energy dispersive spectroscopy measurements of the exact same locations. In particular, a much stronger Si segregation (~10 atomic% via atom probe versus ~4 atomic% via electron microscopy) and different Cr profile shapes were detected that are critical to models of radiation induced segregation and stress corrosion cracking behavior. These quantitative differences highlight the need for comparative microscopy and critical evaluation of limitations in each analytical method. Elemental segregation to dislocations and conjoined-clusters were also highlighted by atom probe; confirming and expanding upon what has been observed in test reactor neutron and accelerator-based ion irradiations.

36 MATERIALS SCIENCE↗
DOE OSTI2025

Quantitative Imaging of Cobalt Phthalocyanine Distribution on Carbon Nanotubes: A Deep Learning Approach to Catalyst Characterization

Electrochemical reduction of carbon dioxide (CO 2 ) offers a pathway to valuable products, with catalysts playing a crucial role. This study investigates the distribution of cobalt tetraaminophthalocyanine (CoPc-NH 2 ) immobilized on carbon nanotubes (CNTs), utilizing high-angle annular dark-field scanning transmission electron microscopy (HAADF-STEM) to characterize CoPc-NH 2 distribution. A challenge in the quantitative HAADF-STEM analysis is the introduction of bias from manual Co atom identification. To address this, we developed and trained a convolutional neural network (CNN) using a data set generated from images of CoPc-NH 2 /CNT samples with varying Co loadings. The CNN, implemented in TensorFlow and Keras, facilitated Co atom detections. Analysis of the CNN-generated data confirmed a correlation between Co loading and surface density, consistent with findings from UV–vis spectroscopy. Furthermore, the application of Ripley’s L(d) function highlighted the presence of slight Co atom clustering. Furthermore, this work demonstrates the utility of the combined HAADF-STEM and CNN approach for providing spatially resolved information about catalyst distribution on nonplanar supports, revealing structural details that are typically lost through other characterization methods.

HAADF-STEM↗
DOE OSTI2024

Repurposing of the Run 2 CMS High Level Trigger Infrastructure as a Cloud Resource for Offline Computing

The former CMS Run 2 High Level Trigger (HLT) farm is one of the largest contributors to CMS compute resources, providing about 25k job slots for offline computing. This CPU farm was initially employed as an opportunistic resource, exploited during inter-fill periods, in the LHC Run 2. Since then, it has become a nearly transparent extension of the CMS capacity at CERN, being located on-site at the LHC interaction point 5 (P5), where the CMS detector is installed. This resource has been configured to support the execution of critical CMS tasks, such as prompt detector data reconstruction. It can therefore be used in combination with the dedicated Tier 0 capacity at CERN, in order to process and absorb peaks in the stream of data coming from the CMS detector. The initial configuration for this resource, based on statically configured VMs, provided the required level of functionality. However, regular operations of this cluster revealed certain limitations compared to the resource provisioning and use model employed in the case of WLCG sites. A new configuration, based on a vacuum-like model, has been implemented for this resource in order to solve the detected shortcomings. This paper reports about this redeployment work on the permanent cloud for an enhanced support to CMS offline computing, comparing the former and new models’ respective functionalities, along with the commissioning effort for the new setup.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
DOE OSTI2021

Bacterial xylan utilization regulons: systems for coupling depolymerization of methylglucuronoxylans with assimilation and metabolism

Abstract Bioconversion of lignocellulosic resources offers an economically promising path to renewable energy. Technological challenges to achieving bioconversion include the development of cost-effective processes that render the cellulose and hemicellulose components of these resources to fermentable hexoses and pentoses. Natural bioprocessing of the hemicellulose fraction of lignocellulosic biomass requires depolymerization of methylglucuronoxylans. This requires secretion of endoxylanases that release xylooligosaccharides and aldouronates. Physiological, biochemical, and genetic studies with selected bacteria support a process in which a cell-anchored multimodular GH10 endoxylanase catalyzes release of the hydrolysis products, aldotetrauronate, xylotriose, and xylobiose, which are directly assimilated and metabolized. Gene clusters encoding intracellular enzymes, including α-glucuronidase, endoxylanase, β-xylosidase, ABC transporter proteins, and transcriptional regulators, are coordinately responsive to substrate induction or repression. The rapid rates of glucuronoxylan utilization and microbial growth, along with the absence of detectable products of depolymerization in the medium, indicate that assimilation and depolymerization are coupled processes. Genomic comparisons provide evidence that such systems occur in xylanolytic species in several genera, including Clostridium, Geobacillus, Paenibacillus, and Thermotoga. These systems offer promise, either in their native configurations or through gene transfer to other organisms, to develop biocatalysts for efficient production of fuels and chemicals from the hemicellulose fractions of lignocellulosic resources.

Biotechnology & Applied Microbiology↗
DOE OSTI2023

Beyond the 3rd moment: a practical study of using lensing convergence CDFs for cosmology with DES Y3

ABSTRACT Widefield surveys probe clustered scalar fields – such as galaxy counts, lensing potential, etc. – which are sensitive to different cosmological and astrophysical processes. Constraining such processes depends on the statistics that summarize the field. We explore the cumulative distribution function (CDF) as a summary of the galaxy lensing convergence field. Using a suite of N-body light-cone simulations, we show the CDFs’ constraining power is modestly better than the second and third moments, as CDFs approximately capture information from all moments. We study the practical aspects of applying CDFs to data, using the Dark Energy Survey (DES Y3) data as an example, and compute the impact of different systematics on the CDFs. The contributions from the point spread function and reduced shear approximation are $\lesssim 1~{{\ \rm per\ cent}}$ of the total signal. Source clustering effects and baryon imprints contribute 1–10 per cent. Enforcing scale cuts to limit systematics-driven biases in parameter constraints degrade these constraints a noticeable amount, and this degradation is similar for the CDFs and the moments. We detect correlations between the observed convergence field and the shape noise field at 13σ. The non-Gaussian correlations in the noise field must be modelled accurately to use the CDFs, or other statistics sensitive to all moments, as a rigorous cosmology tool.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2020

Data Analytics Applied to Coal Fired Boilers for Detecting Leaks

Data analytics were used to detect boiler leaks from five different coal-fired boilers including both subcritical and supercritical systems. Discriminant functions were developed that detected leaks up to two weeks prior to forced plant shutdowns for repairs. The leaks were identified to occur at different sections of the boiler for each plant, including waterwalls, economizer and superheater using conventional process measurement data. Leaking conditions were detected with a high degree of confidence (≪ 1% misclassified observations) and were able to distinguish normal operations from those time periods with steam leaks even while operating the power plants in power cycling mode.Multivariable statistical analyses, including Principal Component (PCA), cluster, and Fischer Discriminant Analysis (FDA) were used to characterize the leak occurrence. Normal and operational states with steam leaks were provided in the original process datasets. These datasets were split into two different groups for training and validation purposes. The data were sorted chronologically, and every third observation was assigned to training the Discriminant Function Model (DFM) while the rest were reserved for validation. PCA was used to reduce dimensionality of the original datasets. Canonical and FDA analyses were used to investigate the relationship between process variables. The outcome of the analyses revealed that nearly 35,000 observations were classified correctly; less than 0.05% of total observations were misclassified to be leaking, i.e. both false positives and false negatives.

Indrawan, Natarianto↗
DOE OSTI2021

Identifying Genomic Islands with Deep Neural Networks

Background Horizontal gene transfer is the main source of adaptability for bacteria, through which genes are obtained from different sources including bacteria, archaea, viruses, and eukaryotes. This process promotes the rapid spread of genetic information across lineages, typically in the form of clusters of genes referred to as genomic islands (GIs). Different types of GIs exist, and are often classified by the content of their cargo genes or their means of integration and mobility. While various computational methods have been devised to detect different types of GIs, no single method is capable of detecting all types. Results We propose a method, which we call Shutter Island, that uses a deep learning model (Inception V3, widely used in computer vision) to detect genomic islands. The intrinsic value of deep learning methods lies in their ability to generalize. Via a technique called transfer learning, the model is pre-trained on a large generic dataset and then re-trained on images that we generate to represent genomic fragments. We demonstrate that this image-based approach generalizes better than the existing tools. Conclusions We used a deep neural network and an image-based approach to detect the most out of the correct GI predictions made by other tools, in addition to making novel GI predictions. The fact that the deep neural network was re-trained on only a limited number of GI datasets and then successfully generalized indicates that this approach could be applied to other problems in the field where data is still lacking or hard to curate.

Computer Vision↗
DOE OSTI2020

Real-time structural motif searching in proteins using an inverted index strategy

Biochemical and biological functions of proteins are the product of both the overall fold of the polypeptide chain, and, typically, structural motifs made up of smaller numbers of amino acids constituting a catalytic center or a binding site that may be remote from one another in amino acid sequence. Detection of such structural motifs can provide valuable insights into the function(s) of previously uncharacterized proteins. Technically, this remains an extremely challenging problem because of the size of the Protein Data Bank (PDB) archive. Existing methods depend on a clustering by sequence similarity and can be computationally slow. We have developed a new approach that uses an inverted index strategy capable of analyzing >170,000 PDB structures with unmatched speed. The efficiency of the inverted index method depends critically on identifying the small number of structures containing the query motif and ignoring most of the structures that are irrelevant. Our approach (implemented at motif.rcsb.org ) enables real-time retrieval and superposition of structural motifs, either extracted from a reference structure or uploaded by the user. Herein, we describe the method and present five case studies that exemplify its efficacy and speed for analyzing 3D structures of both proteins and nucleic acids.

59 BASIC BIOLOGICAL SCIENCES↗
NASA NTRS1983

Was the Big Bang hot?

Techniques for verifying the spectrum defined by Woody and Richards (WR, 1981), which serves as a base for dust-distorted models of the 3 K background, are discussed. WR detected a sharp deviation from the Planck curve in the 3 K background. The absolute intensity of the background may be determined by the frequency dependence of the dipole anisotropy of the background or the frequency dependence effect in galactic clusters. Both methods involve the Doppler shift; analytical formulae are defined for characterization of the dipole anisotropy. The measurement of the 30-300 GHz spectra of cold galactic dust may reveal the presence of significant amounts of needle-shaped grains, which would in turn support a theory of a cold Big Bang.

Wright, E. L.↗
NASA NTRS1983

Einstein X-ray observations of optical-radio selected areas

Einstein Observatory Imaging Proportional Counter X-ray observations of fields in SA 57, SA 68, and U Mi that possess deep optical and radio coverage have been conducted with a sensitivity comparable to that of the Einstein Observatory's medium sensitivity survey of serendipitous X-ray sources. The number of X-ray sources detected is consistent with a log N(greater than S) - log S slope of about -1.5. The fraction of active galactic nuclei in the X-ray sample is less than about 50 percent, with the rest being composed of clusters and normal galaxies, consistent with the medium sensitivity survey.

Katgert, P.↗
NASA NTRS1991

The CfA Einstein Observatory extended deep X-ray survey

All IPC exposures in the Einstein Extended Deep X-ray Survey program have been reanalyzed. The current survey covers about 2.3 sq deg with a typical limiting sensitivity of about 5 x 10 to the -14th ergs/sq cm/s in the energy range from 0.8-3.5 keV. A total of 25 IPC sources are detected above a threshold of 4.5 sigma. A total of 18 are detected independently in the HRI, leading to the identification of six with stars and 11 with extragalactic objects. The remaining sources are classified as extragalactic. The population of identified extragalactic objects is dominated by QSOs, with one or two possible clusters. The basic conclusions of the original survey remain unchanged.

Primini, F. A.↗
NASA NTRS1994

Dust extinction and molecular gas in the dark cloud IC 5146

In this paper we describe a powerful method for mapping the distribution of dust through a molecular cloud using data obtained in large-scale, multiwavelength, infrared imaging surveys. This method combines direct measurements of near-infrared color excess and certain techniques of star counting to derive mean extinctions and map the dust column density distribution through a cloud at higher angular resolutions and greater optical depths than those achieved previously by optical star counting. We report the initial results of the application of this method to a dark cloud complex near the cluster IC 5146, where we have performed coordinated, near-infrared, JHK imaging and (13)CO, C(18)O, and CS millimeter-wave, molecular-line surveys of a large portion of the complex. More than 4000 stars were detected in our JHK survey of the cloud. Of these, all but about a dozen appear to be field stars not associated with the cloud. Star count maps at J band show a striking and detailed anticorrelation between the surface density of J-band sources and CO and CS molecular-line emission. We used the (H-K) colors and positions of nearly 1300 sources to directly measure and map the extinction and thus trace the dust column density through the cloud at an effective angular resolution of 1 min .5. We report an interesting correlation between the measured dispersion in our extinction determinations and the extinction. Modeling this relation indicates that effects of small-scale cloud structure dominate the uncertainties in our measurements. Moreover, we demonstrate that such observations can be used to place constraints on the nature of the spatial distribution of extinction on scales smaller than our resolution. In particular, we show that models in which the dust is distributed uniformly or in discrete high-extinction clumps on scales smaller than (1 min .5) are inconsistent with the observations. We have derived extinctions at the same positions and at the same angular resolution (1 min .7) as our molecular-line observations. This enabled a direct comparison of (13)CO, C(18)O, and CS integrated intensities and column densities with A(sub V) for more than 500 positions in the cloud, corresponding to a range in A(sub V) between 0 to 32 mag of extinction. We found the integrated intensities of (13)CO, C(18)O, and CS to be roughly linearly correlated with extinction over different ranges of extinction. However, for all three molecules we find the scatter in the observed relations to be larger than can be accounted for by instrumental error, suggesting that there are large intrinsic variations in the abundances or excitation of the molecules through the cloud. Mean abundances for all the molecules relative to hydrogen were directly derived from the data. The ratio of (13)CO to C(18)O abundances was found to be significantly higher than the terrestrial ratio in regions where extinction is less than 10 mag. In the same region, the dispersion in the abundance ratio is also found to be very large, suggesting that the abundances of one or both molecules are very unstable even at relatively large cloud optical depths. Beyond 10 mag of extinction the abundances of both species appear very stable with their ratio close to the terrestrial value.

Lada, Charles J.↗
NASA NTRS1994

Search for unresolved sources in the COBE-DMR two-year sky maps

We have searched the temperature maps from the Cosmic Background Explorer (COBE) Differential Microwave Radiometers (DMR) first two years of data for evidence of unresolved sources. The high-latitude sky (absolute value of b greater than 30 deg) contains no sources brighter than 192 microKelvin thermodynamic temperature (322 Jy at 53 GHz). The cumulative count of sources brighter than threshold T, N(greater than T), is consistent with a superposition of instrument noise plus scale-invariant spectrum of cosmic temperature fluctuations normalized to Q(sub rms-PS) = 17 microKelvin. We examine the temperature maps toward nearby clusters and find no evidence for any Sunyaev-Zel'dovich effect, delta y less than 7.3 x 10(exp -6) (95% CL) averaged over the DMR beam. We examine the temperature maps near the brightest expected radio sources and detect no evidence of significant emission. The lack of bright unresolved sources in the DMR maps, taken with anisotropy measurements on smaller angular scales, places a weak constraint on the integral number density of any unresolved Planck-spectrum sources brighter than flux density S, n(greater than S) less than 2 x 10(exp 4)/(S/1 Jy)(exp 2)/sr.

Kogut, A.↗
NASA NTRS2002

SHEEP: The Search for the High Energy Extragalactic Population

We present the SHEEP survey for serendipitously-detected hard X-ray sources in ASCA GIS images. In a survey area of approx. 40 sq deg, 69 sources were detected in the 5-10 keV band to a limiting flux of approx. 10(exp -13) erg/sq cm/s. The number counts agree with those obtained by the similar BeppoSAX HELLAS survey, and both are in close agreement with ASCA and BeppoSAX 2-10 keV surveys. Spectral analysis of the SHEEP sample reveals that the 2-10 and 5-10 keV surveys do not sample the same populations, however, as we find considerably harder spectra, with an average Gamma approx. 1.0 assuming no absorption. The implication is that the agreement in the number counts is coincidental, with the 5-10 keV surveys gaining approximately as many hard sources as they lose soft ones, when compared to the 2-10 keV surveys. This is hard to reconcile with standard AGN "population synthesis" models for the X-ray background, which posit the existence of a large population of absorbed sources. We find no evidence of the population hardening at faint fluxes, with the exception that the few very brightest objects are anomalously soft. 53 of the SHEEP sources have been covered by ROSAT in the pointed phase. Of these 32 were detected. An additional 3 were detected in the RASS. As expected the sources detected with ROSAT are systematically softer than those detected with ASCA alone, and of the sample as a whole. Although they represent a biased subsample, the ROSAT positions allow relatively secure catalog identifications to be made. We find associations with a wide variety of AGN and a few clusters and groups. At least two X-ray sources identified with high-z QSOs present very hard X-ray spectra indicative of absorption, despite the presence of broad optical lines. A possible explanation for this is that we are seeing relatively dust-free "warm absorbers" in high luminosity/redshift objects. Our analysis defines a new, hard X-ray selected sample of objects - mostly active galactic nuclei - which is less prone to bias due to obscuration than previous optical or soft X-ray samples. They are therefore more representative of the population of AGN in the universe in general, and the SHEEP survey should produce bright examples of the sources that make up the hard X-ray background, the majority of which has recently been resolved by Chandra. This should help elucidate the nature of the new populations.

Nandra, K.↗