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At least 1,063 records · Page 59
All sourcesNASA NTRSDOE OSTI
DOE OSTI2023

Constructing Regulatory Networks to Compare Axenic and Interspecies Microbial Gene Transcription

In this preliminary study, we constructed gene regulatory networks (GRNs) from transcriptional expression data of axenic and interspecies microbial cultures with the goal of predicting how cocultivation affected greenhouse gas respiration by these species. The specific strains of Methylotuvimicrobium alkaliphilum 20Z, a methylotroph, and Cyanobacterium stanieri HL-69, a phototroph, were chosen for their viability in industrial bioprocessing. We ranked directed interactions between gene pairs based on the ability of the input gene to predict the expression of a target gene relative to their transcriptomes. While we were able to identify topological differences between conditions, our initial findings require validation through experimental analysis and further modeling. We aimed to develop a systematic thresholding approach to optimize the accuracy of our networks. We filtered out trial networks separately from top gene interactions of the scored rankings. Parameters of unfiltered and filtered networks were used to test and develop thresholding approaches. Knee point detection of edge weight distributions was explored as an approach for separating significant interactions from insignificant interactions in unfiltered networks. While knee detection failed to produce analogous networks for broad cross-condition comparisons, the results informed us about the proportions of significant edges present in unfiltered networks. We also calculated the average mean degree for nodes in a selection of trial networks to find a thresholding value characteristic to all groups. While we did not reach a definitive conclusion, we gained insight into the coregulatory structures of our groups and made critical evaluations of systematic methods for filtering networks. We recommend an iterative process for the inference of GRNs, where the most significant results from preliminary explorations are used to improve the efficiency with which regulatory motifs are chosen for experimental characterization. Experimental results can then inform the framework of adjusted models to improve broad interpretations of GRNs.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2026

Automated tape-target centering based on template matching for construction measurement tasks using robotic total station

Robotic total stations have transformed surveying and construction mapping through precise, efficient, and automated measurements. These instruments integrate a theodolite, which measures horizontal and vertical angles, with an electronic distance measurement (EDM) unit to determine distances, allowing accurate 3D measurement of observable points. Traditionally, users manually aimed the total station at a target. Recent advancements in robotic motor control and integration of cameras now enable automatic rotation and aiming, typically requiring only a single operator to position the target. Automated aiming is commonly performed using retroreflector prisms, which reflect light back to the source with minimal scattering, enabling high-precision measurements over long distances. However, retroreflectors, especially those designed for 360 degree, can be expensive and impractical for certain applications. This paper presents an algorithm for automating the center detection of low-cost disposable tape targets using the total station's onboard camera and a template matching algorithm. The algorithm identifies the target's center pixel in the image, and the instrument is commanded to aim at that location. We evaluated the performance of this template-matching-based centering method under various distances, angles, lighting conditions, and field environments, comparing its results to both manual aiming and conventional automated aiming of tape targets. Manual aiming was used as the baseline operational reference in the absence of an independent ground-truth measurement. The proposed approach achieves target centering results comparable to the manual baseline. This method provides a cost-effective alternative for high-precision applications where retroreflector targets are constrained by budget or logistics.

Harrington, Joshua [ORNL]↗
DOE OSTI2020

1 K refrigerator for the CLAS12 Polarized Target Design, Construction, and First Results

A dynamically polarized target of protons and deuterons in irradiated NH3 and ND3 will be employed with the CLAS12 detector system to explore the spin structure of the nucleon in Hall B at Jefferson Lab. This target will feature a versatile, horizontal 1 K refrigerator that has been constructed by a collaboration of Christopher Newport University, Old Dominion University, the University of Virginia, and the JLab Target Group. A description of the challenges involved with designing the target for the CLAS12 experiments and the collaboration’s solutions will be presented. These include a modular and compact design of the 1 K refrigerator and its ancillary equipment, as well as a novel mechanism for loading the target samples. Initial test results of the system will also be included.

Brock, James↗
DOE OSTI2021

Construction, installation and operation of ProtoDUNE-SP

The single-phase liquid argon TPC at CERN (ProtoDUNE-SP) is an engineering prototype for the first module of the DUNE far detector. This prototype, which has dimensions of a cube of about 10 m edge, provides full validation of the use of the membrane tank technology for large dimension cryostats. Furthermore, the very high performance of the protoDUNE-SP TPC with more than 500 days of continuous and stable operation, demonstrated the reliability of the LAr detection technology at a scale never tested before. In this talk we will review the main characteristics and milestones of the construction and installation of protoDUNE-SP which provide a series of benchmarks for DUNE. The performance for several different detector working points will also be discussed.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
DOE OSTI2018

Greenbuilt Construction Energy Efficiency Retrofit House Demonstration - Sacramento

One of the homes that was part of Sacramento Municipal Utility District's (SMUD) Energy Efficiency Retrofit Demonstration (EERD) project was a 1980's era home in Fair Oaks, California, referred to as the Greenbuilt house, as Greenbuilt Construction completed the retrofit of the home. The home underwent an extensive energy efficiency retrofit with a goal of achieving a 50% reduction in energy use to demonstrate the potential for other builders and homeowners in the area. The retrofit measures included installing: ENERGY STAR appliances high efficiency light roof radiant barrier additional ceiling and wall insulation double-pane, low-e windows external motorized shading and solar tubes a 16 SEER/9.75 HSPF heat pump improved ducts a whole-house fan a heat pump water heater (HPWH) integrated collector storage solar water heater (ICS SWH) and 3.2 kW of PV. In addition, the home was air sealed to reduce infiltration. Researchers from the National Renewable Energy Laboratory (NREL) performed short-term tests on the major systems installed as part of the retrofit to ensure that they were performing as expected. The systems evaluated included the space conditioning heat pump, the air handler and ducts, the HPWH, the ICS SWH, and the PV array. Some ducts were untwisted after testing revealed that two rooms were not getting sufficient airflow. Afterwards, all systems were performing as expected. In addition to testing to confirm adequate performance of all new systems, NREL was given the opportunity to use the Greenbuilt house as a laboratory house for a year. The space conditioning system and home water systems were subjected to a series of tests to determine optimal control strategies for lowering energy consumption and reducing peak (4:00-7:00 p.m.) energy consumption during the summer. The different cooling strategies considered included two different precooling schedules, drawing the external shades during the day and using the whole-house fan at night, and combinations of those. The most effective strategy for reducing overall energy consumption was the use of external shades, which cut the daily cooling load by 34% and reduced the energy use during peak hours by 40%. The different precooling strategies eliminated the peak load entirely but actually increased daily cooling energy use. The use of shades and the advanced precooling strategy increased the daily energy use by 5% but eliminated all peak use and maintained a comfortable home. These results were verified over the entire summer using an Energy Plus model of the home. The hot water system was tested in two configurations: the HPWH alone and the ICS solar water heater paired with the HPWH. Six hot water draw profiles, varying in terms of daily hot water volume, time of day for hot water use, and the duration of the draws, were imposed on the hot water system to test their effects on performance. When operating alone in the summer, the HPWH operated with a COP around 2.2, except for a draw that used a quarter of the averaged daily hot water usage, which had an average COP of 1.6. The combination of ICS and HPWH resulted in larger COPs, but also more variability depending on the draw profile. The standard, hourly draw profile produced the highest COP of 6.4. The quarter volume draw profile had the lowest COP of 2.8 for the combined system. Relative to a standard electric water heater, the HPWH operating alone reduced the peak load by 56% and the combined ICS and HPWH system completely eliminated the peak load.

air sealing↗
DOE OSTI2017

Efficiency estimation for the grid-tie photovoltaic stations construction in some regions of Central Asia and Transcaucasia

An assessment of the economic expediency of the construction of network photovoltaic stations in some regions of Uzbekistan, Kyrgyzstan, Tajikistan, Turkmenistan, Kazakhstan, and Azerbaijan is presented, with an accounting for climate conditions and the electricity rates that were adopted to encourage the development of renewable power engineering. The analysis covers design variants of 5-MW model solar power plants on photovoltaic modules made according to various technologies with respective modern and advanced cost indicators. The performance indicators of PVPPs with multicrystalline photovoltaic modules and highly efficient HIT technology modules were made by the Hevel company in Russia.

14 SOLAR ENERGY↗
DOE OSTI2023

Expeditious Coordination-Driven Construction of Hierarchically Nanoporous Barium Salts

Organic moieties-derived salts with permanent porosity and polarized channels have shown unique features and attractive performance in the field of adsorption, separation, and conduction. However, state-of-the-art organic salts generally rely on ionic interaction and hydrogen bonding formation to maintain the porous channels. The synthesis of organic moiety-derived salts with permanent accessible pores even after removal of the trapped guest molecules, and without the constraint of hydrogen bonding formation still remains a great challenge. Herein, we present an expeditious construction pathway to generate hierarchically nanoporous barium salts without hydrogen bonding formation. The strong ionic interaction of the barium cation and sulfonate anions led to rapid reaction equilibrium (~2 min), affording diverse barium-derived ionic polymer (Ba-IP) with permanent porosity and highly polarized channels. The produced Ba-IP materials with abundant cations and anions displayed high CO 2 /N 2 and CO 2 /CH 4 separation performance, with the selectivities reaching up to 89.5 and 280, respectively, at 273 K, surpassing most of the organic polymers functionalized by ionic moieties.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2022

Construction of chicken infectious anemia virus infectious clone and study on its pathogenicity

Chicken infectious anemia virus (CIAV) can be transmitted through contaminated live poultry vaccine. However, the pathogenicity of contaminated CIAV strains is rarely reported. Previously, the chickens showed the typical symptoms of anemia after using the attenuated live fowl pox virus (FPV) vaccine. Therefore, exogenous CIAV contamination was suspected. We detected anti-CIAV antibodies in SPF chicks vaccinated with the FPV vaccine. CIAV contamination was confirmed in the FPV vaccine, and the CIAV strain was named JS2020-FPV. This study aims to rescue JS2020-FPV by reverse genetic assays and investigate its pathogenicity. Firstly, double-copies infectious clone of JS2020-FPV was constructed. For the pathogenicity study, infectious clone of JS2020-FPV was used to inoculate 1-day-old SPF chicks. The typical symptoms of anemia were observed in the JS2020-PFV group 14 days post inoculation. The hematocrit and body weight of chicks in the JS2020-PFV group were significantly lower than those in the mock group. Notably, the thymus development index and antibody levels of NDV were lower in chicks in the JS2020-PFV group than those in the mock group. Different degrees of apoptosis of MSB1 and DF-1 were observed after inoculated with the JS2020-FPV VP3 recombinant fusion protein expressed by E. coli system, indicating that VP3 induced apoptosis in the transformed cells. Overall, the pathogenicity of the CIAV detected in the contaminated vaccine was confirmed by inoculating SPF chicks with the double-copies infectious DNA clone in this study. Our findings indicate that the dangers of vaccine contamination cannot be ignored.

Wang, Jinjin↗
DOE OSTI2023

Construction of nano slow-release systems for antibacterial active substances and its applications: A comprehensive review

At present, nano-carrier materials with antibacterial activity are of great significance. Due to the widespread resistance of many pathogenic microorganisms, it has seriously threatened human health. The natural antimicrobial substances extracted from fruits and vegetables can significantly improve their stability combined with nano-carrier materials. The resistance of pathogenic microorganisms will be substantially reduced, greatly enhancing the effect of active antimicrobial substances. Nanotechnology has excellent research prospects in the food industry, antibacterial preservation, food additives, food packaging, and other fields. This paper introduces nano-carrier materials and preparation techniques for loading and encapsulating active antibacterial substances in detail by constructing a nano-release system for active antibacterial substances. The antibacterial effect can be achieved by protecting them from adverse external conditions and destroying the membrane of pathogenic microorganisms. The mechanism of the slow release of the bacteriostatic active substance is also described. The mechanism of carrier loading and release is mainly through non-covalent forces between the bacteriostatic active substance and the carrier material, such as hydrogen bonding, π-π stacking, van der Waals forces, electrostatic interactions, etc., as well as the loading and adsorption of the bacteriostatic active substance by the chemical assembly. Finally, its wide application in food and medicine is introduced. It is hoped to provide a theoretical basis and technical support for the efficient utilization and product development of bacteriostatic active substances.

Cao, Jiayong↗
DOE OSTI2016

BdCESA7 , BdCESA8 , and BdPMT utility promoter constructs for targeted expression to secondary cell-wall-forming cells of grasses

Utility vectors with promoters that confer desired spatial and temporal expression patterns are useful tools for studying gene and cellular function and for industrial applications. To target the expression of DNA sequences of interest to cells forming plant secondary cell walls, which generate most of the vegetative biomass, upstream regulatory sequences of the Brachypodium distachyon lignin biosynthetic gene BdPMT and the cellulose synthase genes BdCESA7 and BdCESA8 were isolated and cloned into binary vectors designed for Agrobacterium -mediated transformation of monocots. Expression patterns were assessed using the β-glucuronidase gene GUSPlus and X-glucuronide staining. All three promoters showed strong expression levels in stem tissue at the base of internodes where cell wall deposition is most active, in both vascular bundle xylem vessels and tracheids, and in interfascicular tissues, with expression less pronounced in developmentally older tissues. In leaves, BdCESA7 and BdCESA8 promoter-driven expression was strongest in leaf veins, leaf margins, and trichomes; relatively weaker and patchy expression was observed in the epidermis. BdPMT promoter-driven expression was similar to the BdCESA promoters expression patterns, including strong expression in trichomes. The intensity and extent of GUS staining varied considerably between transgenic lines, suggesting that positional effects influenced promoter activity. Introducing the BdPMT and BdCESA8 Open Reading Frames into BdPMT and BdCESA8 utility promoter binary vectors, respectively, and transforming those constructs into Brachypodium pmt and cesa8 loss-of-function mutants resulted in rescue of the corresponding mutant phenotypes. This work therefore validates the functionality of these utility promoter binary vectors for use in Brachypodium and likely other grass species. Lastly, the identification, in Bdcesa8-1 T-DNA mutant stems, of an 80% reduction in crystalline cellulose levels confirms that the BdCESA8 gene is a secondary-cell-wall-forming cellulose synthase.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2024

Towards Next-Generation Urban Decision Support Systems through AI-Powered Construction of Scientific Ontology Using Large Language Models—A Case in Optimizing Intermodal Freight Transportation

The incorporation of Artificial Intelligence (AI) models into various optimization systems is on the rise. However, addressing complex urban and environmental management challenges often demands deep expertise in domain science and informatics. This expertise is essential for deriving data and simulation-driven insights that support informed decision-making. In this context, we investigate the potential of leveraging the pre-trained Large Language Models (LLMs) to create knowledge representations for supporting operations research. By adopting ChatGPT-4 API as the reasoning core, we outline an applied workflow that encompasses natural language processing, Methontology-based prompt tuning, and Generative Pre-trained Transformer (GPT), to automate the construction of scenario-based ontologies using existing research articles and technical manuals of urban datasets and simulations. From these ontologies, knowledge graphs can be derived using widely adopted formats and protocols, guiding various tasks towards data-informed decision support. The performance of our methodology is evaluated through a comparative analysis that contrasts our AI-generated ontology with the widely recognized pizza ontology, commonly used in tutorials for popular ontology software. We conclude with a real-world case study on optimizing the complex system of multi-modal freight transportation. Our approach advances urban decision support systems by enhancing data and metadata modeling, improving data integration and simulation coupling, and guiding the development of decision support strategies and essential software components.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗
DOE OSTI2023

The DESI One-Percent Survey: Constructing Galaxy–Halo Connections for ELGs and LRGs Using Auto and Cross Correlations

In the current Dark Energy Spectroscopic Instrument (DESI) survey, emission line galaxies (ELGs) and luminous red galaxies (LRGs) are essential for mapping the dark matter distribution at z ~ 1. We measure the auto and cross correlation functions of ELGs and LRGs at 0.8 < z ≤ 1.0 from the DESI One-Percent survey. Following Gao et al., we construct the galaxy–halo connections for ELGs and LRGs simultaneously. With the stellar–halo mass relation for the whole galaxy population (i.e., normal galaxies), LRGs can be selected directly by stellar mass, while ELGs can also be selected randomly based on the observed number density of each stellar mass, once the probability P sat of a satellite galaxy becoming an ELG is determined. We demonstrate that the observed small scale clustering prefers a halo mass-dependent P sat model rather than a constant. With this model, we can well reproduce the auto correlations of LRGs and the cross correlations between LRGs and ELGs at r p > 0.1 Mpc h –1 . We can also reproduce the auto correlations of ELGs at r p > 0.3 Mpc h –1 (s > 1 Mpc h –1 ) in real (redshift) space. Although our model has only seven parameters, we show that it can be extended to higher redshifts and reproduces the observed auto correlations of ELGs in the whole range of 0.8 < z ≤ 1.6, which enables us to generate a lightcone ELG mock for DESI. With the above model, we further derive halo occupation distributions for ELGs, which can be used to produce ELG mocks in coarse simulations without resolving subhalos.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2026

plexosdb: A Modular Library for Programmatic PLEXOS Model Construction

plexosdb is a lightweight Python library for constructing PLEXOS models using a SQLite-backed data structure. It provides a clear, modular interface that maps relational data directly to model components. By leveraging SQLite and idiomatic Python, it enables fast iteration and reproducible workflows. The result is a performant, composable foundation for scalable PLEXOS model development.

24 POWER TRANSMISSION AND DISTRIBUTION↗
NASA NTRS1962

PROGRESS REPORT ON THE DEVELOPMENT OF PROTECTED CONSTRUCTION FOR HYPERSONIC VEHICLES

The structural problems of re-entry occasioned by aerodynamic heating are now generally well known. Typical of these heating problems is the environment experienced by the manned lifting vehicle re-entering from a low altitude orbit. Figure 1 shows typical curves of lower surface temperature as a function of time for a wing loading of 25 Ibs/ft(exp 2), and a lift-drag ratio of 2.5. The two curves cover a practical range of re-entry angles, the lower curve representing an ideal re-entry path with zero dive angle and the upper curve assuming a 2° error in the re-entry angle. Maneuvers for course change or correction are also added to the upper curve. Significant factors from this curve are the relationship between the maximum temperatures and the capabilities of available metallic material, and also the long re-entry time and its effect on total heat load. If a very shallow re-entry is made, maximum lower surface temperatures reach 2000°F which is just within the range of conventional superalloys. To accommodate practical re-entry angles and maneuvers, however, the temperature capability must reach about 2500°F which requires refractory metals. The re-entry time may be as high as 100 minutes, which gives total heat loads of approximately 40,000 BTU/ft(exp 2). A heat load of this magnitude, with equilibrium surface temperatures of the values shown, suggests that a lighter airframe can be constructed by dissipating the heat by radiation from the surface, rather than by absorbing it with a heat sink, or surface cooling, or ablation. Air Force programs to provide airframes for this type of environment have involved the parallel development of a number of different structural concepts. The development to be discussed here was carried out by Bell Aerosystems Company for the Fabrication Branch, Manufacturing Technology Laboratory, Directorate of Materials and Processes, Aeronautical Systems' Division, Wright-Patterson Air Force Base, Ohio, under Contract AF33(600)-40100 (Double-Wall Cooled Structure).

Reentry vehicle↗