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All sources NASA NTRS DOE OSTI

DOE OSTI2023

Amino mapping: possibility to visualize amino-N compounds in the rhizosphere of Zea Mays L.

Abstract Understanding N uptake by plants, the N cycle, and their relationship to soil heterogeneity has generated a great deal of interest in the distribution of amino-N compounds in soil. Visualization of the spatial distribution of amino-N in soil can provide insights into the role of labile N in plant-microbial mechanisms of N acquisition and plant N uptake, but until now, it has remained technically challenging. Here, we describe a novel technique to visualize the amino-N distribution at the root-soil interface. The technique is based on time-lapse amino mapping (TLAM) using membranes saturated with the fluorogenic OPAME reagent (O-phthalaldehyde and β-mercaptoethanol). OPAME in the membrane reacts with organic compounds containing a NH 2 functional group at the membrane-soil interface, generating a fluorescent product visible under UV light and detectable by a digital camera. The TLAM amino-mapping technique was applied to visualize and quantify the concentration of amino-N compounds in the rhizosphere of maize (Zea MaysL.). A ten times greater amino-N concentration was detected in the rhizosphere compared to non-rhizosphere soil. The high content of amino-N was mainly associated with the root tips and was 3 times larger than the average amino-N content at seminal roots. The amino-N rhizosphere was 2 times broader around the root tips than around other parts of the roots. We concluded that TLAM is a promising approach for monitoring the fate of labile N in soils. However, the technique needs to be standardized for different soil types, plant species, and climate conditions to allow wider application.

Agriculture↗

DOE OSTI2020

Molecular remodeling in Populus PdKOR RNAi roots profiled using LC-MS/MS proteomics

Plant endo-β-1,4-glucanases belonging to the Glycoside Hydrolase Family 9 have functional roles in cell wall biosynthesis and remodeling via endohydrolysis of (1→4)-β-D-glucosidic linkages. Modification of cell wall chemistry via RNAi-mediated downregulation of Populus deltoides KOR1 (PdKOR), a endo-β-1,4-glucanase gene, in Populus deltoides has been shown to have functional consequences for the composition of secondary metabolome and the ability of modified roots to interact with beneficial microbes. The molecular remodeling that underlies the observed differences at metabolic, physiological, and morphological levels in roots is not well understood. Here we used a LC-MS/MS-based proteome profiling approach to survey the molecular remodeling in root tissues of PdKOR and control plants. A total of 14316 peptides were identified and these mapped to 7139 P. deltoides proteins. Based on 90% sequence identity, the measured protein accessions represent 1187 functional protein groups. Analysis of GO categories and specific individual proteins showed differential expression of proteins relevant to plant-microbe interactions, cell wall chemistry, and metabolism. The new proteome dataset serves as a useful resource for deriving new hypotheses and empirical testing pertaining to functional roles of proteins and pathways in differential priming of plant roots to interactions with microbes.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

NASA NTRS2004

A Deconvolution Approach for the Mapping of Acoustic Sources (DAMAS) Determined from Phased Microphone Arrays

Current processing of acoustic array data is burdened with considerable uncertainty. This study reports an original methodology that serves to demystify array results, reduce misinterpretation, and accurately quantify position and strength of acoustic sources. Traditional array results represent noise sources that are convolved with array beamform response functions, which depend on array geometry, size (with respect to source position and distributions), and frequency. The Deconvolution Approach for the Mapping of Acoustic Sources (DAMAS) method removes beamforming characteristics from output presentations. A unique linear system of equations accounts for reciprocal influence at different locations over the array survey region. It makes no assumption beyond the traditional processing assumption of statistically independent noise sources. The full rank equations are solved with a new robust iterative method. DAMAS is quantitatively validated using archival data from a variety of prior high-lift airframe component noise studies, including flap edge/cove, trailing edge, leading edge, slat, and calibration sources. Presentations are explicit and straightforward, as the noise radiated from a region of interest is determined by simply summing the mean-squared values over that region. DAMAS can fully replace existing array processing and presentations methodology in most applications. It appears to dramatically increase the value of arrays to the field of experimental acoustics.

Brooks, Thomas F.↗

NASA NTRS2006

A Deconvolution Approach for the Mapping of Acoustic Sources (DAMAS) Determined from Phased Microphone Arrays

Brooks, Thomas F.↗

DOE OSTI2023

An Incremental Gradient Method for Optimization Problems With Variational Inequality Constraints

We consider minimizing a sum of agent-specific nondifferentiable merely convex functions over the solution set of a variational inequality (VI) problem in that each agent is associated with a local monotone mapping. This problem finds an application in computation of the best equilibrium in nonlinear complementarity problems arising in transportation networks. We develop an iteratively regularized incremental gradient method where at each iteration, agents communicate over a directed cycle graph to update their solution iterates using their local information about the objective and the mapping. The proposed method is single-timescale in the sense that it does not involve any excessive hard-to-project computation per iteration. We derive nonasymptotic agent-wise convergence rates for the suboptimality of the global objective function and infeasibility of the VI constraints measured by a suitably defined dual gap function. Finally, the proposed method appears to be the first fully iterative scheme equipped with iteration complexity that can address distributed optimization problems with VI constraints over cycle graphs.

convergence↗

NASA NTRS1996

Mapping Deforestation and Land Use in Amazon Rainforest Using SAR-C Imagery

Land use changes and deforestation in tropical rainforests are among the major factors affecting the overall function of the global environment. To routinely assess the spatial extend and temporal dynamics of these changes has become an important challenge in several scientific disciplines such as climate and environmental studies. In this paper, the feasibility of using polarimetric spaceborne SAR data in mapping land cover types in the Amazon is studied.

SAR-C Imagery Amazon Rainforest Land Use Deforesta↗

DOE OSTI2023

Detection of the significant impact of source clustering on higher order statistics with DES Year 3 weak gravitational lensing data

We measure the impact of source galaxy clustering on higher order summary statistics of weak gravitational lensing data. By comparing simulated data with galaxies that either trace or do not trace the underlying density field, we show that this effect can exceed measurement uncertainties for common higher order statistics for certain analysis choices. We evaluate the impact on different weak lensing observables, finding that third moments and wavelet phase harmonics are more affected than peak count statistics. Using Dark Energy Survey (DES) Year 3 (Y3) data, we construct null tests for the source-clustering-free case, finding a p-value of p = 4 × 10 −3 (2.6σ) using third-order map moments and p = 3 × 10 −11 (6.5σ) using wavelet phase harmonics. The impact of source clustering on cosmological inference can be either included in the model or minimized through ad hoc procedures (e.g. scale cuts). We verify that the procedures adopted in existing DES Y3 cosmological analyses were sufficient to render this effect negligible. Failing to account for source clustering can significantly impact cosmological inference from higher order gravitational lensing statistics, e.g. higher order N-point functions, wavelet-moment observables, and deep learning or field-level summary statistics of weak lensing maps.

79 ASTRONOMY AND ASTROPHYSICS↗

DOE OSTI2022

Enabling Modular Autonomous Feedback‐Loops in Materials Science through Hierarchical Experimental Laboratory Automation and Orchestration

Abstract Materials acceleration platforms (MAPs) operate on the paradigm of integrating combinatorial synthesis, high‐throughput characterization, automatic analysis, and machine learning. Within a MAP, one or multiple autonomous feedback loops may aim to optimize materials for certain functional properties or to generate new insights. The scope of a given experiment campaign is defined by the range of experiment and analysis actions that are integrated into the experiment framework. Herein, the authors present a method for integrating many actions within a hierarchical experimental laboratory automation and orchestration (HELAO) framework. They demonstrate the capability of orchestrating distributed research instruments that can incorporate data from experiments, simulations, and databases. HELAO interfaces laboratory hardware and software distributed across several computers and operating systems for executing experiments, data analysis, provenance tracking, and autonomous planning. Parallelization is an effective approach for accelerating knowledge generation provided that multiple instruments can be effectively coordinated, which the authors demonstrate with parallel electrochemistry experiments orchestrated by HELAO. Efficient implementation of autonomous research strategies requires device sharing, asynchronous multithreading, and full integration of data management in experimental orchestration, which to the best of the authors’ knowledge, is demonstrated for the first time herein.

36 MATERIALS SCIENCE↗

DOE OSTI2020

Differential electron yield imaging with STXM

In this report total electron yield (TEY) imaging is an established scanning transmission X-ray microscopy (STXM) technique that gives varying contrast based on a sample's geometry, elemental composition, and electrical conductivity. However, the TEY-STXM signal is determined solely by the electrons that the beam ejects from the sample. A related technique, X-ray beam-induced current (XBIC) imaging, is sensitive to electrons and holes independently, but requires electric fields in the sample. Here we report that multi-electrode devices can be wired to produce differential electron yield (DEY) contrast, which is also independently sensitive to electrons and holes, but does not require an electric field. Depending on whether the region illuminated by the focused STXM beam is better connected to one electrode or another, the DEY-TXM contrast changes sign. DEY-STXM images thus provide a vivid map of a device's connectivity landscape, which can be key to understanding device function and failure. To demonstrate an application in the area of failure analysis, we image a 100 nm, lithographically-defined aluminum nanowire that has failed after being stressed with a large current density.

47 OTHER INSTRUMENTATION↗

DOE OSTI2022

Electron-only reconnection and associated electron heating and acceleration in PHASMA

In this work, using incoherent Thomson scattering, electron heating and acceleration at the electron velocity distribution function (EVDF) level are investigated during electron-only reconnection in the PHAse Space MApping (PHASMA) facility. Reconnection arises during the merger of two kink-free flux ropes. Both push and pull type reconnection occur in a single discharge. Electron heating is localized around the separatrix, and the electron temperature increases continuously along the separatrix with distance from the X-line. The local measured gain in enthalpy flux is up to 70% of the incoming Poynting flux. Notably, non-Maxwellian EVDFs comprised of a warm bulk population and a cold beam are directly measured during the electron-only reconnection. The electron beam velocity is comparable to, and scales with, electron Alfvén speed, revealing the signature of electron acceleration caused by electron-only reconnection. The observation of oppositely directed electron beams on either side of the X-point provides “smoking-gun” evidence of the occurrence of electron-only reconnection in PHASMA. 2D particle-in-cell simulations agree well with the laboratory measurements. The measured conversion of Poynting flux into electron enthalpy is consistent with recent observations of electron-only reconnection in the magnetosheath [Phan et al., Nature 557, 202 (2018)] at similar dimensionless parameters as in the experiments. The laboratory measurements go beyond the magnetosheath observations by directly resolving the electron temperature gain.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

DOE OSTI2025

Calculation of ion–ion mutual neutralization rate constants using Landau–Zener theory coupled with trajectory simulations for Ar + –Cl − , Br − , I −

In this computational study, we self-consistently calculate the rate constants of mutual neutralization reactions by incorporating the electron transfer probability, using Landau–Zener state transition theory with inputs derived from ab initio quantum chemistry calculations, into classical trajectory simulations. Electronic structure calculations are done using correlation consistent basis sets with multi-reference configuration interaction to map all the molecular electronic states below the ion-dissociation limit as a function of the distance between the reacting species. Our electronic structure calculations have been significantly improved from our previous work through improved selection of molecular electronic configurations maintaining a fine grid of 1a 0 over a wide range of bond lengths and accurate treatment of spin–orbit couplings. Non-adiabatic coupling matrix elements are calculated with the three-point central difference method near each avoided crossing to estimate the exact crossing point R x and coupling parameter H if , which are inputs to the multi-channel Landau–Zener theory to calculate the electron transition probability. Our approach is applied to estimate the mutual neutralization rate constants for the following ion pairs: Ar + –Cl − , Ar + –Br − , Ar + –I − at ∼133 Pa. Furthermore, our predictions are compared against the experimental data reported. It is seen that the improvement in the electronic structure calculation results in excellent agreement between the simulation results and the available experimental data to within a factor of ∼2 or ∼±50%.

Complete-active space self-consistent field↗

DOE OSTI2022

Probing plasma physics with spectral index maps of accreting black holes on event horizon scales

The Event Horizon Telescope (EHT) collaboration has produced the first resolved images of the supermassive black holes at the centre of our galaxy and at the centre of the elliptical galaxy M87. As both technology and analysis pipelines improve, it will soon become possible to produce spectral index maps of black hole accretion flows on event horizon scales. Here, in this work, we predict spectral index maps of both M87* and Sgr A* by applying the general relativistic radiative transfer (GRRT) code IPOLE to a suite of general relativistic magnetohydrodynamic (GRMHD) simulations. We analytically show that the spectral index increases with increasing magnetic field strength, electron temperature, and optical depth. Consequently, spectral index maps grow more negative with increasing radius in almost all models, since all of these quantities tend to be maximized near the event horizon. Additionally, photon ring geodesics exhibit more positive spectral indices, since they sample the innermost regions of the accretion flow with the most extreme plasma conditions. Spectral index maps are sensitive to highly uncertain plasma heating prescriptions (the electron temperature and distribution function). However, if our understanding of these aspects of plasma physics can be tightened, even the spatially unresolved spectral index around 230 GHz can be used to discriminate between models. In particular, Standard and Normal Evolution (SANE) flows tend to exhibit more negative spectral indices than Magnetically Arrested Disc (MAD) flows due to differences in the characteristic magnetic field strength and temperature of emitting plasma.

(magnetohydrodynamics) MHD↗

DOE OSTI2025

Mapping of the transient electric field causing spark suppression in Micromegas of the ATLAS New Small Wheels

Resistive strips Micromegas are employed in the ATLAS New Small Wheel project. They have already been installed and operate in the experimental cavern of the ATLAS experiment at CERN. This work attempts to describe the mechanism of the surface electric charge spread on a resistive strip of the Micromegas detector and the created transient electric field leading to the suppression of the spark rate in the amplification region. The electric field spatial mapping is calculated versus time by using the accurate 3-layer geometry as a function of the resistive layer thickness around its value used in Micromegas detectors. We also used the approximated method based on 2-layer geometry to investigate its discrepancy from the accurate one.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

DOE OSTI2023

Los Alamos Enterprise Analysis and Data System (LEADS)

The Los Alamos Enterprise Analysis and Data System (LEADS) is an integrated database system and analysis application used to examine the Laboratory’s assets and equities. The data mapping framework is structured to follow laboratory organizations, programs, geographical technical areas, and other functional groupings, such as facilities and equipment. LEADS application goal is to quantify the size and information related to the current condition of assets and equities. The data and inter-dependent relationships allow for insights and further analyses to be conducted of current program-of-records, the laboratory agenda, and “what-if” scenario studies. The understanding and the outputs of this application will support understanding of the laboratory’s current state, planning, and decision-making processes.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

NASA NTRS1972

Static performance of a 13.97 cm (5.5 inch) diameter model VTOL lift fan

A tip-turbine-driven fan of the type currently being used in wind tunnel tests of VTOL lift fan models was tested. Values of thrust, weight flow, exit total and static pressure, exit swirl angle, and turbine temperature drop were measured as a function of fan speed for several inlet and exit configurations. A standard fan performance map was also obtained.

Lowe, W. H.↗

NASA NTRS1972

An empirical model of energetic solar proton fluxes with applications to earth orbiting spacecraft

An empirical model for energetic solar proton fluxes is presented. With this model, the effects of such protons on geocentric space missions, to be flown during the next solar active period (1966-1983) and with orbits involving partial magnetospheric shielding, may be estimated. A synoptic background review is given, followed by a detailed discussion of the model's analytic development. Also given are comments on the model's use, errors, uncertainties, and limitations, including sample calculations which demonstrate the application of specific or general project missions. Finally, for circular trajectories, percentage exposure maps are presented, depicting fractional mission times spent outside particular L-shells as functions of orbit altitude and inclination.

Stassinopoulos, E. G.↗

NASA NTRS1974

Energy and pitch angle distributions for auroral ions using the current sheet acceleration model

Using a dipole-plus-tail magnetic field model, H(+), He(+2), and O(+6) ions are followed numerically, backward in time, from an output plane perpendicular to the axis of the geomagnetic tail, to their point of entrance to the magnetosphere as solar wind particles in the magnetosheath. An adiabatic or guiding center approximation is used in regions where the particles do not interact directly with the current sheet. A Maxwellian distribution with bulk flow is assumed for solar wind particles in the magnetosheath. Bulk velocity, density, and temperature along the magnetopause are taken from the fluid calculations of Spreiter. Using Liouville's theorem, and varying initial conditions at the output plane, the distribution function is found as a function of energy and pitch angle at the output plane. These results are then mapped to the auroral ionosphere using guiding center theory.

Jaeger, E. F.↗

NASA NTRS1978

Onboard processing for future space-borne imaging systems

There is a strong rationale for increasing the rate of information return from imaging class experiments aboard both terrestrial and planetary spacecraft. Future imaging systems will be designed with increased spatial resolution, broader spectral range and more spectral channels (or higher spectral resolution). The data rate implied by these improved performance characteristics can be expected to grow more rapidly than the projected telecommunications capability. One solution to this dilemma is the use of improved onboard data processing. The use of onboard classification processing in a multispectral imager can result in orders of magnitude increase in information transfer for very specific types of imaging tasks. Several of these processing functions are included in the conceptual design of an Infrared Multispectral Imager which would map the spatial distribution of characteristic geologic features associated with deposits of economic minerals.

Wellman, J. B.↗