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All sourcesNASA NTRSDOE OSTI
NASA NTRS2012

Achieving Accuracy Requirements for Forest Biomass Mapping: A Data Fusion Method for Estimating Forest Biomass and LiDAR Sampling Error with Spaceborne Data

The synergistic use of active and passive remote sensing (i.e., data fusion) demonstrates the ability of spaceborne light detection and ranging (LiDAR), synthetic aperture radar (SAR) and multispectral imagery for achieving the accuracy requirements of a global forest biomass mapping mission. This data fusion approach also provides a means to extend 3D information from discrete spaceborne LiDAR measurements of forest structure across scales much larger than that of the LiDAR footprint. For estimating biomass, these measurements mix a number of errors including those associated with LiDAR footprint sampling over regional - global extents. A general framework for mapping above ground live forest biomass (AGB) with a data fusion approach is presented and verified using data from NASA field campaigns near Howland, ME, USA, to assess AGB and LiDAR sampling errors across a regionally representative landscape. We combined SAR and Landsat-derived optical (passive optical) image data to identify forest patches, and used image and simulated spaceborne LiDAR data to compute AGB and estimate LiDAR sampling error for forest patches and 100m, 250m, 500m, and 1km grid cells. Forest patches were delineated with Landsat-derived data and airborne SAR imagery, and simulated spaceborne LiDAR (SSL) data were derived from orbit and cloud cover simulations and airborne data from NASA's Laser Vegetation Imaging Sensor (L VIS). At both the patch and grid scales, we evaluated differences in AGB estimation and sampling error from the combined use of LiDAR with both SAR and passive optical and with either SAR or passive optical alone. This data fusion approach demonstrates that incorporating forest patches into the AGB mapping framework can provide sub-grid forest information for coarser grid-level AGB reporting, and that combining simulated spaceborne LiDAR with SAR and passive optical data are most useful for estimating AGB when measurements from LiDAR are limited because they minimized forest AGB sampling errors by 15 - 38%. Furthermore, spaceborne global scale accuracy requirements were achieved. At least 80% of the grid cells at 100m, 250m, 500m, and 1km grid levels met AGB density accuracy requirements using a combination of passive optical and SAR along with machine learning methods to predict vegetation structure metrics for forested areas without LiDAR samples. Finally, using either passive optical or SAR, accuracy requirements were met at the 500m and 250m grid level, respectively.

Montesano, P. M.↗
DOE OSTI2022

Viscoelastic necking dynamics between attractive microgels

Hypothesis: Microgels can deform and interpenetrate and display colloid/polymer duality. The effective interaction of microgels in the collapsed state is governed by the interplay of polymer–solvent interfacial tension and bulk elasticity. A connecting neck is shown to mediate microgel interaction, but its temporal evolution has not been addressed. Here we hypothesize that the necking dynamics of attractive microgels exhibits liquid-like or solid-like behavior over different time and length scales. Experiments: We simulate the merging and pinching of attractive microgels with different crosslinking densities in explicit solvent using dissipative particle dynamics. The temporal coalescence dynamics of microgels is investigated and compared with simple liquid and polymeric droplets. We model the neck growth on long time scales using Maxwell model of polymer relaxation and compare the theoretical prediction with simulation data. The mechanical strength of the neck is characterized systematically via simulated pinch-off of microgels by steered molecular dynamics. Findings: We evidence a crossover in the coalescence dynamics reflecting the viscoelastic signature of microgels. In contrast to the common knowledge that viscoelastic materials respond elastically on short time scales, the early expansion of the microgel neck exhibits a linear behavior, similar to the viscous coalescence of liquid droplets. However, the late regime with arrested dynamics resembles sintering of solid particles. Through an analytical model relating microgel dynamics to neck growth, we show that the long-term behavior is governed by stress relaxation of the polymers in the neck region and predict an exponential decay in the rate of growth, which agrees favorably with the simulation. Different from coalescence, the thread thinning in microgel breakup primarily highlights its polymeric characteristics.

42 ENGINEERING↗
DOE OSTI2020

A priori analysis of a power-law sub-filter scale mixing model for transported PDF modeling of high Karlovitz turbulent premixed flames

Accurate modeling of mixing in large-eddy simulation (LES) / transported probability density function (PDF) modeling of turbulent combustion remains an outstanding issue. The issue is particularly salient in turbulent premixed combustion under extreme conditions such as high-Karlovitz number Ka. Here, the present study addresses this issue by conducting an a priori analysis of a power-law scaling based mixing timescale model for the transported PDF model. A recently produced DNS dataset of a high-Ka turbulent jet flame is used for the analysis. A power-law scaling is observed for a scaling factor used to model the sub-filter scale mixing timescale in this high-Ka turbulent premixed DNS flame when the LES filter size is much greater than the characteristic thermal thickness of a laminar premixed flame. The sensitivity of the observed power-law scaling to the different viewpoints (local or global) and to the different scalars for the data analysis is examined and the dependence of the model parameters on the dimensionless numbers Ka and Re (the Reynolds number) is investigated. Different model formulations for the mixing timescale are then constructed and assessed in the DNS flame. The proposed model is found to be able to reproduce the mixing timescale informed by the high-Ka DNS flame significantly better than a previous model.

42 ENGINEERING↗
DOE OSTI2024

Cross Correlating Cosmological Probes for LSST & CMB-S4

The upcoming years will be populated with state-of-the-art Stage-IV cosmological surveys. This paper forecasts the cosmological information we expect to constrain using probes from the Rubin Observatory Legacy Survey of Space and Time (LSST) and CMB-S4. We explore the effectiveness of different large-scale-structure probes, including the power spectra of galaxy weak lensing, galaxy position, Cosmic Microwave Background (CMB) lensing, and their cross-correlations. We use correlated lognormal simulations with the expected redshift distributions, galaxy number densities, and noise levels of the LSST survey. For CMB weak lensing, we use CMB-S4 lensing simulations with anticipated noise levels to obtain the expected error bars of each probe. We investigate the constraining power of the cosmological parameters for the individual probes and their combinations in an idealized scenario. We do not take into account astrophysical and observational parameters such as galaxy bias variations and photometric redshift un- certainties. Overall, we find the auto-correlated probes hold stronger constraints on cosmological parameters than the cross-correlated probes due to kernel differences. However, the cross-correlation of galaxy clustering and CMB lensing is very comparable to the auto-correlation of galaxy clustering with only an 8% stronger constraint in S8. It will be important for future surveys to use these auto and cross probes in combination due to the different astrophysical and systematic effects involved in CMB and late-time galaxy data. When systematics are added to this analysis, the cross probes will serve as a check for systematic biases in individual probes. In addition, we find a significant increase in constraint using all four probes in combination. This can be illustrated by the increase in constraint of S8 by 93.2% comparing galaxy clustering auto-correlation to a combination of all probes. Our study is a first step toward forecasting the high-precision cosmological constraints we expect to obtain using the next generation of large-scale structure probes.

Gibbins, Grace↗
DOE OSTI2022

Consistent lensing and clustering in a low- S 8 Universe with BOSS, DES Year 3, HSC Year 1, and KiDS-1000

ABSTRACT We evaluate the consistency between lensing and clustering based on measurements from Baryon Oscillation Spectroscopic Survey combined with galaxy–galaxy lensing from Dark Energy Survey (DES) Year 3, Hyper Suprime-Cam Subaru Strategic Program (HSC) Year 1, and Kilo-Degree Survey (KiDS)-1000. We find good agreement between these lensing data sets. We model the observations using the Dark Emulator and fit the data at two fixed cosmologies: Planck (S8 = 0.83), and a Lensing cosmology (S8 = 0.76). For a joint analysis limited to large scales, we find that both cosmologies provide an acceptable fit to the data. Full utilization of the higher signal-to-noise small-scale measurements is hindered by uncertainty in the impact of baryon feedback and assembly bias, which we account for with a reasoned theoretical error budget. We incorporate a systematic inconsistency parameter for each redshift bin, A, that decouples the lensing and clustering. With a wide range of scales, we find different results for the consistency between the two cosmologies. Limiting the analysis to the bins for which the impact of the lens sample selection is expected to be minimal, for the Lensing cosmology, the measurements are consistent with A = 1; A = 0.91 ± 0.04 (A = 0.97 ± 0.06) using DES+KiDS (HSC). For the Planck case, we find a discrepancy: A = 0.79 ± 0.03 (A = 0.84 ± 0.05) using DES+KiDS (HSC). We demonstrate that a kinematic Sunyaev–Zeldovich-based estimate for baryonic effects alleviates some of the discrepancy in the Planck cosmology. This analysis demonstrates the statistical power of small-scale measurements; however, caution is still warranted given modelling uncertainties and foreground sample selection effects.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2020

Controlling Drug Absorption, Release, and Erosion of Photopatterned Protein Engineered Hydrogels

A protein-engineered triblock copolymer hydrogel composed of two self-assembling domains (SADs) has been fabricated by a photoactivatable diazirine group followed by ultraviolet (UV)-mediated crosslinking. The photocrosslinkable protein polymer CEC-D has been patterned into various features including different micrometer-scale stripes by using lithographic techniques. The patterned hydrogels are important for encapsulation of small molecules where a photopatterned fraction of 50% is optimal for maximum absorption. Stripe-patterned CEC-D 100–100 exhibits slightly lower swelling ratios, an 8.9 times lower erosion profile, and a 2.6-fold higher drug release compared to the unpatterned hydrogel control, CEC-D0. Our studies demonstrate the potential of photocrosslinkable protein polymer hydrogels to be used as scaffolds for therapeutic delivery of small molecules. Furthermore, through photolithographic techniques on the protein hydrogel, a variety of functionalities can be achieved by patterning different features enabling the mimicry of biological systems.

77 NANOSCIENCE AND NANOTECHNOLOGY↗
DOE OSTI2024

On hydromagnetic wave interactions in collisionless, high- β plasmas

We describe the interaction of parallel-propagating Alfvén waves with ion-acoustic waves and other Alfvén waves, in magnetized, high- β collisionless plasmas. This is accomplished through a combination of analytical theory and numerical fluid simulations of the Chew–Goldberger–Low (CGL) magnetohydrodynamic (MHD) equations closed by Landau-fluid heat fluxes. An asymptotic ordering is employed to simplify the CGL-MHD equations and derive solutions for the deformation of an Alfvén wave that results from its interaction with the pressure anisotropy generated either by an ion-acoustic wave or another, larger-amplitude Alfvén wave. The difference in time scales of acoustic and Alfvénic fluctuations at high- β means that interactions that are local in wavenumber space yield little modification to either mode within the time it takes the acoustic wave to Landau damp away. Instead, order-unity changes in the amplitude of Alfvénic fluctuations can result after interacting with frequency-matched acoustic waves. Additionally, we show that the propagation speed of an Alfvén-wave packet in an otherwise homogeneous background is a function of its self-generated pressure anisotropy. This allows for the eventual interaction of separate co-propagating Alfvén-wave packets of differing amplitudes. The results of the CGL-MHD simulations agree well with these predictions, suggesting that theoretical models relying on the interaction of these modes should be reconsidered in certain astrophysical environments. Applications of these results to weak Alfvénic turbulence and to the interaction between the compressive and Alfvénic cascades in strong, collisionless turbulence are also discussed.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
NASA NTRS2025

Describing Seasonal Mixtures of Cloud Regimes Via “Regimes of Regimes”

We propose a new type of cloud classification, relevant to monthly or longer time scales, but which inherently still encompasses cloud subgrid variability information at ~100 km scales. Our proposed classification partitions frequencies of occurrence over these scales of previously defined cloud regimes (CRs). We call the resulting distinct cloud entities regimes of regimes (RORs). While the CRs have been previously shown to successfully classify daily mesoscale subgrid variability via distributions of cloud fraction within distinct combinations of cloud top pressure and cloud optical thickness, the RORs essentially represent the prevalent seasonal mixtures of these CRs. RORs thus embody the seasonal cloudiness of a mesoscale region. We show that each ROR can still be associated with more traditional cloud classifications via composites of coincident active (lidar and cloud radar) cloud views. In a first application that gauges the potential utility of RORs, we pair them with CERES EBAF radiative fluxes to gain insight into recent trends of the cloud radiative effect. The ROR corresponding to an environment of shallow convection stands out in this analysis largely because of its declining population. Our study demonstrates the potential of RORs to categorize globally mesoscale cloudiness at monthly/seasonal scales and to serve as proxies of different atmospheric states at these scales.

Nayeong Cho↗
DOE OSTI2026

Beyond $Δm^2$: Absolute Mass Sensitivity in Neutrino Oscillations

Conventional wisdom says that neutrino oscillations measure only mass-squared differences and not the absolute neutrino mass scale. This is true, however, only at leading order in the expansion parameters $m_i/E$, the ratios of the neutrino masses $m_i$ ($i=1,2,3$) to the neutrino energy $E$. At next-to-leading order, the oscillation phase includes terms proportional to $m_i^4-m_j^4 = Δm^2_{ij}(m_i^2+m_j^2)$, and is therefore sensitive to the absolute mass scale. In this paper, we derive the next-to-leading-order corrections using a wave-packet treatment and taking into account the neutrino-production kinematics. We then apply this result to reactor antineutrinos and find that the JUNO experiment is sensitive to neutrino masses of a few hundred keV. While not competitive with existing bounds from beta decay, electron capture, and cosmology, neutrino oscillations provide a novel, complementary probe of the neutrino mass scale, with sensitivity to a different combination of neutrino masses.

Alves, Gustavo F.S. [Fermilab; Argonne; Northweste↗
NASA NTRS2012

Achieving Accuracy Requirements for Forest Biomass Mapping: A Spaceborne Data Fusion Method for Estimating Forest Biomass and Lidar Sampling Error

The synergistic use of active and passive remote sensing (i.e., data fusion) demonstrates the ability of spaceborne light detection and ranging (LiDAR), synthetic aperture radar (SAR) and multispectral imagery for achieving the accuracy requirements of a global forest biomass mapping mission (+/-20 Mg/ha or 20%, the greater of the two, for at least 80% of grid cells). A data fusion approach also provides a means to extend 3D information from discrete spaceborne LiDAR measurements of forest structure across scales much larger than that of the LiDAR footprint. For estimating biomass, these measurements mix a number of errors including those associated with LiDAR footprint sampling over regional-global extents. A general framework for mapping above ground live forest biomass density (AGB) with a data fusion approach is presented and verified using data from NASA field campaigns near Howland, ME, USA, to assess AGB and LiDAR sampling errors across a regionally representative landscape. We combined SAR and Landsat-derived optical (passive optical) image data to identify contiguous areas (>0.5 ha) that are relatively homogenous in remote sensing metrics (forest patches). We used this image-derived data with simulated spaceborne LiDAR derived from orbit and cloud cover simulations and airborne data from NASA's Laser Vegetation Imaging Sensor (LVIS) to compute AGB and estimate LiDAR sampling error for forest patches and 100 m, 250 m, 500 m, and 1 km grid cells. At both the patch and grid scales, we evaluated differences in AGB estimation and sampling error from the combined use of LiDAR with both SAR and passive optical and with either SAR or passive optical alone. First, this data fusion approach demonstrates that incorporating forest patches into the AGB mapping framework can provide sub-grid forest information for coarser grid-level AGB reporting. Second, a data fusion approach for estimating AGB using simulated spaceborne LiDAR with SAR and passive optical image combinations reduced forest AGB sampling errors 12%-38% from those where LiDAR is used with SAR or passive optical alone. In absolute terms, sampling errors were reduced from 14-40 Mg/ha to 11-28 Mg/ha across all grid scales and prediction methods, where minimum sampling errors were 11, 15, 18, and 22 Mg/ha for 1 km, 500 m, 250 m, and 100 m grid scales, respectively. Third, spaceborne global scale accuracy requirements were achieved whereby at least 80% of the grid cells at 100 m, 250 m, 500 m, and 1 km grid levels met AGB accuracy requirements using a combination of passive optical and SAR along with machine learning methods to predict vegetation structure metrics for forested areas without LiDAR samples. Finally, using either passive optical or SAR, accuracy requirements were met at the 500 m and 250 m grid level, respectively..

LiDAR↗
NASA NTRS1994

A double-moment multiple-phase four-class bulk ice scheme, Part 1: Description

A detailed ice-phase bulk microphysical scheme has been developed for simulating the hydrometeor distributions of convective and stratiform precipitation in different large-scale environmental conditions. The proposed scheme involves 90 distinct microphysical processes, which predict the mixing ratios and the number concentrations of small ice crystals, snow, graupel, and frozen drops/hail, as well as the mixing ratios of liquid water on wet precipitation ice (snow, graupel, frozen drops). The number of adjustable coefficients has been significantly reduced in comparison with other bulk schemes. Additional improvements have been made to the parameterization in the following areas: (1) representing small ice crystals with nonzero terminal fall velocities and dispersive size distributions, (2) accurate and computationally efficient calculations of precipitation collection processes, (3) reformulating the collection equation to prevent unrealistically large accretion rates, (4) more realistic conversion by riming between different classes of precipitation ice, (5) preventing unrealistically large rates of raindrop freezing and freezing of liquid water on ice, (6) detailed treatment of various rime-splintering ice multiplication mechanisms, (7) a simple representation of the Hobbs-Rangno ice enhancement process, (8) aggregation of small ice crystals and snow, and (9) allowing explicit competition between cloud water condensation and ice deposition rates rather than using saturation adjustment techniques. For the purposes of conserving the higher moments of the particle distributions, preserving the spectral widths (or slopes) of the particle spectra is shown to be more important than strict conservation of particle number concentration when parameterizing changes in ice-particle number concentrations due to melting, vapor transfer processes (sublimation of dry ice, evaporation from wet ice), and conversion between different hydrometeor species. The microphysical scheme is incorporated into a nonhydrostatic cloud model in Part 2 of this study. The model performed well in simulating the radar and microphysical structures of a midlatitude-continental squall lines and a tropical-maritime squall system with minimal tuning of the parameterization, even though the vertical profiles of radar reflectivity differed substantially between these storms.

Ferrier, Brad Shoenberg↗
NASA NTRS1991

Regional climate change predictions from the Goddard Institute for Space Studies high resolution GCM

A new diagnostic tool is developed for examining relationships between the synoptic scale circulation and regional temperature distributions in GCMs. The 4 x 5 deg GISS GCM is shown to produce accurate simulations of the variance in the synoptic scale sea level pressure distribution over the U.S. An analysis of the observational data set from the National Meteorological Center (NMC) also shows a strong relationship between the synoptic circulation and grid point temperatures. This relationship is demonstrated by deriving transfer functions between a time-series of circulation parameters and temperatures at individual grid points. The circulation parameters are derived using rotated principal components analysis, and the temperature transfer functions are based on multivariate polynomial regression models. The application of these transfer functions to the GCM circulation indicates that there is considerable spatial bias present in the GCM temperature distributions. The transfer functions are also used to indicate the possible changes in U.S. regional temperatures that could result from differences in synoptic scale circulation between a 1XCO2 and a 2xCO2 climate, using a doubled CO2 version of the same GISS GCM.

Crane, Robert G.↗
DOE OSTI2024

Reduced accrual of mineral-associated organic matter after two years of enhanced rock weathering in cropland soils, though no net losses of soil organic carbon

Abstract Enhanced rock weathering (ERW), the application of crushed silicate rock to soil, can remove atmospheric carbon dioxide by converting it to (bi) carbonate ions or solid carbonate minerals. However, few studies have empirically evaluated ERW in field settings. A critical question remains as to whether additions of crushed rock might positively or negatively affect soil organic matter (SOM)—Earth’s largest terrestrial organic carbon (C) pool and a massive reservoir of organic nitrogen (N). Here, in three irrigated cropland field trials in California, USA, we investigated the effect of crushed meta-basalt rock additions on different pools of soil organic carbon and nitrogen (i.e., mineral-associated organic matter, MAOM, and particulate organic matter, POM), active microbial biomass, and microbial community composition. After 2 years of crushed rock additions, MAOM stocks were lower in the upper surface soil (0–10 cm) of plots with crushed rock compared to unamended control plots. At the 2 sites where baseline pre-treatment data were available, neither total SOC nor SON decreased over the 2 years of study in plots with crushed rock or unamended control plots. However, the accrual rate of MAOM-C and MAOM-N at 0–10 cm was lower in plots with crushed rock vs. unamended controls. Before ERW is deployed at large scales, our results suggest that field trials should assess the effects of crushed rock on SOM pools, especially over multi-year time scales and in different environmental contexts, to accurately assess changes in net C and understand the mechanisms driving interactions between ERW and SOM cycling.

58 GEOSCIENCES↗
DOE OSTI2022

Radiative natural supersymmetry emergent from the string landscape

In string theory with flux compactifications, anthropic selection for structure formation from a discretuum of vacuum energy values provides at present our only understanding of the tiny yet positive value of the cosmological constant. We apply similar reasoning to a toy model of the multiverse restricted to vacua with the MSSM as the low energy effective theory. Here, one expects a statistical selection favoring large soft SUSY breaking terms leading to a derived value of the weak scale in each pocket universe (with appropriate electroweak symmetry breaking) which differs from the weak scale as measured in our universe. In contrast, the SUSY preserving μ parameter is selected uniformly on a log scale as is consistent with the distribution of SM fermion masses: this favors smaller values of μ. An anthropic selection of the weak scale to within a factor of a few of our measured value — in order to produce complex nuclei as we know them (atomic principle) — provides statistical predictions for Higgs and sparticle masses in accord with LHC measurements. The statistical selection then more often leads to (radiatively-driven) natural SUSY models over the Standard Model or finely-tuned SUSY models such as mSUGRA/CMSSM, split, mini-split, spread, high scale or PeV SUSY. The predicted Higgs and superparticle spectra might be testable at HL-LHC or ILC via higgsino pair production but is certainly testable at higher energy hadron colliders with $ \sqrt{s}$ ~ 30–100 TeV.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
NASA NTRS2006

Simulated convective systems using a cloud resolving model: Impact of large-scale temperature and moisture forcing using observations and GEOS-3 reanalysis

The GCE (Goddard Cumulus Ensemble) model, which has been developed and improved at NASA Goddard Space Flight Center over the past two decades, is considered as one of the finer and state-of-the-art CRMs (Cloud Resolving Models) in the research community. As the chosen CRM for a NASA Interdisciplinary Science (IDS) Project, GCE has recently been successfully upgraded into an MPI (Message Passing Interface) version with which great improvement has been achieved in computational efficiency, scalability, and portability. By basically using the large-scale temperature and moisture advective forcing, as well as the temperature, water vapor and wind fields obtained from TRMM (Tropical Rainfall Measuring Mission) field experiments such as SCSMEX (South China Sea Monsoon Experiment) and KWAJEX (Kwajalein Experiment), our recent 2-D and 3-D GCE simulations were able to capture detailed convective systems typical of the targeted (simulated) regions. The GEOS-3 [Goddard EOS (Earth Observing System) Version-3] reanalysis data have also been proposed and successfully implemented for usage in the proposed/performed GCE long-term simulations (i.e., aiming at producing massive simulated cloud data -- Cloud Library) in compensating the scarcity of real field experimental data in both time and space (location). Preliminary 2-D or 3-D pilot results using GEOS-3 data have generally showed good qualitative agreement (yet some quantitative difference) with the respective numerical results using the SCSMEX observations. The first objective of this paper is to ensure the GEOS-3 data quality by comparing the model results obtained from several pairs of simulations using the real observations and GEOS-3 reanalysis data. The different large-scale advective forcing obtained from these two kinds of resources (i.e., sounding observations and GEOS-3 reanalysis) has been considered as a major critical factor in producing various model results. The second objective of this paper is therefore to investigate and present such an impact of large-scale forcing on various modeled quantities (such as hydrometeors, rainfall, and etc.). A third objective is to validate the overall GCE 3-D model performance by comparing the numerical results with sounding observations, as well as available satellite retrievals.

Shie, C.-L.↗
NASA NTRS1981

The effect of data analysis techniques on the interpretation of wide-angle longwave radiation measurements

Three different data analysis techniques - shape factor, parameter estimation, and deconvolution - have been applied to the same set of satellite radiation measurements to determine their effect on the estimated radiation field. The measurements are from a wide-angle, horizon-to-horizon, nadir-pointing sensor. The shape factor technique reduces each measurement to a radiant exitance at the top of the atmosphere by simple division by a constant. The parameter estimation technique processes all measurements together as a batch and defines the radiant exitance as a least-squares fit to the data. The deconvolution technique takes advantage of the fact that spherical harmonics are the eigenfunctions of the measurement operator. All three techniques are derived, and their assumptions, advantages and disadvantages are discussed. Their results are compared globally, zonally, regionally and on a spatial spectrum basis. All three techniques give comparable results for global parameters; however, results on a regional scale were quite different. The standard deviations of the regional differences in radiant exitance varied from 7.4 to 13.5 W/sq m. Of the three techniques, the parameter estimation technique produced the best regional results and is the choice of the author.

Green, R. N.↗
DOE OSTI2024

An open source knowledge graph ecosystem for the life sciences

Translational research requires data at multiple scales of biological organization. Advancements in sequencing and multi-omics technologies have increased the availability of these data, but researchers face significant integration challenges. Knowledge graphs (KGs) are used to model complex phenomena, and methods exist to construct them automatically. However, tackling complex biomedical integration problems requires flexibility in the way knowledge is modeled. Moreover, existing KG construction methods provide robust tooling at the cost of fixed or limited choices among knowledge representation models. PheKnowLator (Phenotype Knowledge Translator) is a semantic ecosystem for automating the FAIR (Findable, Accessible, Interoperable, and Reusable) construction of ontologically grounded KGs with fully customizable knowledge representation. The ecosystem includes KG construction resources (e.g., data preparation APIs), analysis tools (e.g., SPARQL endpoint resources and abstraction algorithms), and benchmarks (e.g., prebuilt KGs). We evaluated the ecosystem by systematically comparing it to existing open-source KG construction methods and by analyzing its computational performance when used to construct 12 different large-scale KGs. With flexible knowledge representation, PheKnowLator enables fully customizable KGs without compromising performance or usability.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗
DOE OSTI2020

The Large-Eddy Simulation (LES) Atmospheric Radiation Measurement (ARM) Symbiotic Simulation and Observation (LASSO) Activity for Continental Shallow Convection

The U.S. Department of Energy’s Atmospheric Radiation Measurement (ARM) user facility recently initiated the Large-Eddy Simulation (LES) ARM Symbiotic Simulation and Observation (LASSO) activity focused on shallow convection at ARM’s Southern Great Plains (SGP) atmospheric observatory in Oklahoma. LASSO is designed to overcome an oft-shared difficulty of bridging the gap from point-based measurements to scales relevant for model parameterization development, and it provides an approach to add value to observations through modeling. LASSO is envisioned to be useful to modelers, theoreticians, and observationalists needing information relevant to cloud processes. LASSO does so by combining a suite of observations, LES inputs and outputs, diagnostics, and skill scores into data bundles that are freely available, and by simplifying user access to the data to speed scientific inquiry. The combination of relevant observations with observationally constrained LES output provides detail that gives context to the observations by showing physically consistent connections between processes based on the simulated state. A unique approach for LASSO is the generation of a library of cases for days with shallow convection combined with an ensemble of LES for each case. The library enables researchers to move beyond the single-case-study approach typical of LES research. The ensemble members are produced using a selection of different large-scale forcing sources and spatial scales. Since large-scale forcing is one of the most uncertain aspects of generating the LES, the ensemble informs users about potential uncertainty for each date and increases the probability of having an accurate forcing for each case.

54 ENVIRONMENTAL SCIENCES↗