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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 1,045 records · Page 58

4D Multimodal Co-attention Fusion Network with Latent Contrastive Alignment for Alzheimer’s Diagnosis

Multimodal neuroimaging provides complementary structural and functional insights into both human brain organization and disease-related dynamics. Recent studies demonstrate enhanced diagnostic sensitivity for Alzheimer’s disease (AD) through synergistic integration of neuroimaging data (e.g., sMRI, fMRI) with tabular data (e.g., behavioral and cognitive tests). However, the intrinsic heterogeneity across modalities (e.g., 4D spatiotemporal fMRI dynamics vs. 3D anatomical sMRI structure) presents critical challenges for discriminative feature fusion, often leading to information loss or biased fusion. To bridge this gap, we propose M2M-AlignNet: a multimodal co-attention network with latent alignment for early AD diagnosis using sMRI and fMRI. At the core of our approach is a multi-patch-to-multi-patch (M2M) contrastive loss function that quantifies and reduces representational discrepancies via weighted patch correspondence, explicitly aligning fMRI components across brain regions with their sMRI structural substrates without one-to-one constraints. Additionally, we propose a latent-as-query co-attention module to autonomously discover fusion patterns, circumventing modality prioritization biases while minimizing feature redundancy. We conduct extensive experiments to confirm the effectiveness of our method and highlight the correspondence between fMRI and sMRI as AD biomarkers.

Wei, Yuxiang [Georgia Institute of Technology]↗

Thermodynamics shapes the in vivo enzyme burden of glycolytic pathways

Thermodynamically constrained reactions and pathways are hypothesized to impose greater protein demands on cells, requiring higher enzyme amounts to sustain a given flux compared to those with stronger thermodynamics. To test this, we quantified the absolute concentrations of glycolytic enzymes in three bacterial species— Zymomonas mobilis, Escherichia coli , and Clostridium thermocellum —which employ distinct glycolytic pathways with varying thermodynamic driving forces. By integrating enzyme concentration data with corresponding in vivo metabolic fluxes and ΔG measurements, we found that the highly favorable Entner-Doudoroff pathway in Z. mobilis requires only one-fourth the amount of enzymatic protein to sustain the same flux as the thermodynamically constrained pyrophosphate-dependent glycolytic pathway in C. thermocellum , with the Embden-Meyerhof-Parnas pathway in E. coli exhibiting intermediate thermodynamic favorability and enzyme demand. Across all three pathways, early reactions with stronger thermodynamic driving forces generally required lower enzyme investment than later, less favorable steps. Additionally, reflecting differences in glycolytic strategies, the highly reversible ethanol fermentation pathway in C. thermocellum requires 10-fold more protein to maintain the same flux as the irreversible, forward-driven ethanol fermentation pathway in Z. mobilis . Thus, protein investment across glycolytic pathways reflects differences in their thermodynamic favorability.

Clostridium thermocellum↗

Mapping the soil microbiome functions shaping wetland methane emissions

Accounting for only 8% of Earth’s land cover, freshwater wetlands remain the foremost contributors to global methane emissions. Yet the microorganisms and processes underlying methane emissions from wetland soils remain poorly understood. Over a five-year period, we surveyed the microbial membership and in situ methane measurements from over 700 samples in one of the most prolific methane-emitting wetlands in the United States. We constructed a catalog of 2,502 metagenome-assembled genomes (MAGs), with more than half of the 70 bacterial and archaeal phyla sampled containing novel lineages. Integration of these data with 133 soil metatranscriptomes provided a genome-resolved view of the biogeochemical specialization and versatility expressed over wetland soil spatial and temporal gradients. Centimeter-scale depth differences best explained patterns of microbial community structure and transcribed functionalities, even more than land cover or temporal information. Moreover, while extended flooding restructured soil redox, this perturbation failed to reconfigure the transcriptional profiles of methane-cycling microorganisms, contrasting with theoretically expected responses to hydrological perturbations. Co-expression analyses, coupled with depth-resolved methane measurements, revealed the metabolisms and trophic structures most predictive of methane hotspots. Mapping the spatiotemporal transcriptional patterns on this compendium of biogeochemically classified soil-derived genomes begins to untangle the microbial carbon, energy, and nutrient processing contributing to wetland methane production.

MAG↗

Measurement of high-mass $t\bar{t}\ell ^{+}\ell ^{-}$ production and lepton flavour universality-inspired effective field theory interpretations at $\sqrt{s}=13$ $\text {T}\text {e}\hspace{-1.00006pt}\text {V}$ with the ATLAS detector

Measurements of $t\bar{t}\ell ^{+}\ell ^{-}$ production in the region of high dilepton invariant mass with effective field theory (EFT) interpretations are presented. They are performed using final states with three isolated leptons (electrons or muons) and are based on $\sqrt{s} = 13$ TeV proton–proton collision data with an integrated luminosity of $140\,\textrm{fb}^{-1}$, recorded from 2015 to 2018 with the ATLAS detector at the Large Hadron Collider. Measurements of the $t\bar{t}\ell ^{+}\ell ^{-}$ signal strength and cross-section upper-limits are performed inclusively in lepton flavour and separately for electrons and muons. The study also aims to probe anomalous four-fermion interactions including to test for possible lepton flavor universality violation. No significant deviations from the Standard Model predictions are observed and the measurements are interpreted through the EFT formalism to provide new constraints on the relevant operators.

Aad, G. [CNRS/IN2P3] (ORCID:0000000266654934)↗

IR challenges and the machine detector interface at FCC-ee

The FCC-ee, with its unprecedented luminosity goal and high energy reach, creates challenges and requires solutions to many issues in order to produce a realistic design for the complex machine detector interface. The interaction region design for the FCC-ee adopts the crab-waist collision scheme and proposes an elegant local chromaticity correction system. An asymmetric layout of nearby dipoles suppresses the critical energy of synchrotron radiation incoming to the detector at the interaction point to a maximum value of 100 keV. The main challenge of the FCC-ee machine detector interface design is to combine the many conflicting accelerator and 2 T detector constraints, aiming for the optimal trade-off choices that simultaneously allow for a best machine performance in terms of integrated luminosity and data taking efficiency. Much of the success of the FCC-ee will be related to the interaction region design, as a result of the ingredients coming from areas of accelerator physics, mechanical engineering and detector optimization.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Decision Support System

Forest-based value chains involve decisions that begin at the landscape level and extend through processing, product manufacturing, and end-use markets. However, these decisions are often made independently across sectors, with limited visibility into how upstream resource conditions, incentives, and land management choices influence downstream production systems. In forested regions of the United States, wildfire risk, fragmented ownership, and uncertain markets for low-value residues complicate efforts to align extraction, processing, and utilization decisions. Without tools that link these stages, stakeholders may overlook opportunities to improve resource utilization or inadvertently shift impacts elsewhere in the value chain. This repository introduces a decision support system (DSS) that applies a system-impact-analysis approach to forest biomass residues and co-products. The framework integrates forest inventory data, geospatial resource assessments, and economic modeling to evaluate how biomass extraction decisions influence downstream product pathways. By linking regional feedstock avail- ability with market incentives and processing options—such as fuels, wood products, or soil amendments like biochar—the tool allows decision-makers to compare value chain outcomes across multiple utilization strategies.

Davis, Maggie [Oak Ridge National Laboratory (ORNL↗

Hydropower Fleet Intelligence

The Hydropower Fleet Intelligence application can integrate hydropower facilities data sources to perform analyses on asset age, reliability and costs, as well as produce visualizations that combine time series data collected by mechanical component sensors with event history.

Foley, Molly↗

Dynamic_Syringe_Pump_Controller

A LabVIEW based programmable user interface for operating ISCO D-series and SyriXus-series syringe pumps that enables advanced user operations and integration with auxiliary data sources.

Frash, Luke↗

Hacking Kilometer-Scale Models: A Participative Model for Climate Information

In May 2025, nearly 700 participants from all around the world coalesced at 10 regional nodes and a few satellite nodes to take part in a global hackathon of kilometer-scale (horizontal grid spacing < 10 km) regional and global Earth system models. Exciting science is emerging from these efforts, ranging across novel model analysis, new ways of integrating with satellite data, and emulation with machine learning. New technologies were trialed that enable the community to work in new and complementary ways to democratize access to global information at a local scale from a set of the world’s highest-resolution climate models. The hackathon demonstrated how exascale data can be organized to be accessible to anyone. Fundamentally, the community could apply these techniques and technologies to move toward more participative models for coproduction and delivery of diverse sources of climate information for climate scientists and citizens alike.

Climate models↗

Analysis of a macrophage carbamylated proteome reveals a function in post-translational modification crosstalk

Background. Lysine carbamylation is a biomarker of rheumatoid arthritis and kidney diseases. However, its cellular function is understudied due to the lack of tools for systematic analysis of this post-translational modification (PTM). Methods. We adapted a method to analyze carbamylated peptides by co-affinity purification with acetylated peptides based on the cross-reactivity of anti-acetyllysine antibodies. We also performed immobilized-metal affinity chromatography to enrich for phosphopeptides, which allowed us to obtain multi-PTM information from the same samples. Results. By testing the pipeline with RAW 264.7 macrophages treated with bacterial lipopolysaccharide, 7,299, 8,923 and 47,637 acetylated, carbamylated, and phosphorylated peptides were identified, respectively. Our analysis showed that carbamylation occurs on proteins from a variety of functions on sites with similar as well as distinct motifs compared to acetylation. To investigate possible PTM crosstalk, we integrated the carbamylation data with acetylation and phosphorylation data, leading to the identification 1,183 proteins that were modified by all 3 PTMs. Among these proteins, 54 had all 3 PTMs regulated by lipopolysaccharide and were enriched in immune signaling pathways, and in particular, the ubiquitin-proteasome pathway. We found that carbamylation of linear diubiquitin blocks the activity of the anti-inflammatory deubiquitinase OTULIN. Conclusions. Overall, our data show that anti-acetyllysine antibodies can be used for effective enrichment of carbamylated peptides. Moreover, carbamylation may play a role in PTM crosstalk with acetylation and phosphorylation, and that it is involved in regulating ubiquitination in vitro.

59 BASIC BIOLOGICAL SCIENCES↗

Microbiome definition re-visited: old concepts and new challenges

The field of microbiome research has evolved rapidly over the past few decades, and has become a topic of great scientific and public interest. As a result of this rapid growth in interest covering different fields, we are lacking a clear commonly agreed definition of the term ‘microbiome’. Moreover, a consensus on best practices in microbiome research is missing. Recently, a panel of international experts discussed the current gaps in the frame of the European-funded MicrobiomeSupport project. The meeting brought together about 40 leaders from diverse microbiome areas, while more than a hundred experts from all over the world took part in an online survey accompanying the workshop. This article excerpts the outcomes of the workshop and the corresponding online survey embedded in a short historical introduction and uture outlook. We propose a definition of microbiome based on the compact, clear and comprehensive description of the term provided by Whipps et al. in 1988, amended with a set of novel recommendations considering the latest technological developments and research findings. We clearly separate the terms microbiome and microbiota, and provide a comprehensive discussion considering the composition of microbiota, the heterogeneity and dynamics of microbiomes in time and space, the stability and resilience of microbial networks, the definition of core microbiomes and functionally relevant keystone species as well as co-evolutionary principles of microbe-host and inter-species interactions within the microbiome. These broad definitions together with the suggested unifying concepts will help to improve standardization of microbiome studies in the future, and could be the starting point for an integrated assessment of data resulting in a more rapid transfer of knowledge from basic science into practice.

54 ENVIRONMENTAL SCIENCES↗

Enhanced material identification via momentum-integrated muon scattering tomography

Cosmic ray muons, originating from interactions in the upper atmosphere, possess high energy and unique penetrative capabilities suitable for non-traditional radiographic inspection. This study explores their application in various fields such as nuclear fuel cask monitoring, nuclear reactor imaging, and archaeology, leveraging the principle of multiple Coulomb scattering for imaging dense materials. While muon scattering tomography has shown promise, accurately measuring muon momentum remains challenging. This research introduces the Momentum Integrated Point-of-Closest Approach (mPoCA) algorithm, integrating muon momentum data into the traditional Point-of-Closest Approach (PoCA) framework. Utilizing the Cherenkov muon spectrometer, renowned for precise muon momentum estimation, the mPoCA algorithm offers a novel imaging approach. Simulations conducted with GEANT4 evaluate the mPoCA algorithm’s performance against the standard PoCA method, demonstrating superior image resolution and enhanced material identification capabilities, particularly in distinguishing materials like uranium and lead. These findings underscore the potential of the mPoCA algorithm for advancing muon scattering tomography applications.

36 MATERIALS SCIENCE↗

Utah FORGE 3-2417: Fiber-Optic Geophysical Monitoring of Reservoir Evolution - 2024 Annual Workshop Presentation

This is a presentation on the Fiber-Optic Geophysical Monitoring of Reservoir Evolution by Rice University, presented by Jonathan Ajo-Franklin. This video slide presentation discusses the development of an end-to-end fiber-optic sensing approach for EGS to track the (1) initial zone of fracture creation, (2) zones of connected mechanically compliant fractures, (3) zones of flowing fractures, and (4) the integration of the data into an improved THM model. This presentation was featured in the Utah FORGE R&D Annual Workshop on August 13, 2024.

15 GEOTHERMAL ENERGY↗

Groundwater and Surface Water Flow (GSFLOW) model files to explore bedrock circulation depth and porosity in Copper Creek, Colorado

This data package contains integrated hydrological model input and output files for Copper Creek, Colorado (24 km2), a tributary of the East River located in the headwaters of the Upper Colorado River Basin. The model code is the U.S. Geological Survey (USGS) Groundwater and Surface Water Flow (GSFLOW) model. The model contains a 100-m grid resolution and a daily timestep. The land surface model is dynamically linked to a three-dimensional groundwater flow model that allows for streamflow gaining and losing conditions. The groundwater model contains 12 model layers and extends 400 m below land surface. The original Copper Creek model was modified to contain geologic layers representing saprolite, shallow bedrock, and deep bedrock. Endmember depth versus hydraulic conductivity relationships and porosity values for fractured crystalline rock are simulated. For the shallow case, median flow depths occur in the shallow saprolite at depths <8 m, while the deep case promotes a median groundwater flow depth of 100 m. With this modeling framework we compare streamflow response to a plausible worst-case drought lasting up to five years. Streamflow metrics of analysis include average streamflow, fraction of stream network that is dry, no-flow duration, average groundwater flow to streams and time to recovery following the drought. Results and implications are presented in a paper submitted to Geophysical Research Letters titled, "The role of bedrock circulation depth and porosity in mountain streamflow response to prolonged drought" by Rosemary WH. Carroll, Andrew H. Manning and Kenneth H Williams. A Readme.txt file provides instructions on how to download all model files and execute each model scenario. In addition to the GSFLOW output/prms/copper_drought.csv file containing daily basin water stores and fluxes (refer to GSFLOW manual) and the output/prms/copper_drought_statvar.dat file with output defined in the gsflow3.control file (refer to GSFLOW Manual), output files also include spatially distributed daily values of total evapotranspiration, canopy evaporation, precipitation, snowfall, infiltration, snow water equivalent, potential evapotranspiration, recharge, sublimation, soil moisture, contributing interflow, water table elevations, changes in groundwater storage, groundwater evapotranspiration, interbasin groundwater flow (limited to the alluvium below the stream outlet), and surface-groundwater exchanges within the river system.

54 ENVIRONMENTAL SCIENCES↗

Monitoring Operational States of a Nuclear Reactor Using Seismoacoustic Signatures and Machine Learning

Monitoring nuclear reactors is an important safety and security task with growing requirements. We explore the possibility of using seismic and acoustic data for inferring the power level of an operating reactor. Continuous data recorded at a single seismoacoustic station that is located about 50 m away from a research reactor was visualized and analyzed. The data show a clear correlation between seismoacoustic features and reactor main operational states. We designed a workflow that includes two machine learning (ML) models to classify the reactor operational states (OFF, transition, and ON) and estimate reactor power levels (10%, 30%, 50%, 70%, and 90%). We applied and compared five ML algorithms for the reactor OFF-transition-ON and four approaches for the power level classification. We also compared the performance of ML models trained with seismic-only, acoustic-only, and both types of data. Five-fold cross validations were implemented to assure a thorough evaluation of the model performances. Additionally, the results show the extreme boosting gradient algorithm worked best for the first model, whereas random forests performed best for the second model. Combining seismic and acoustic data leads to better performance than using a single type of data. Seismic data contributed more than acoustic data for both models. We reached an accuracy of 0.98 for reactor OFF and ON. The accuracies for the transition state and power levels are less optimal with a minimum accuracy of 0.66. However, our results suggest seismic and acoustic data contain useful information about the transition state as well as power levels. Seismic and acoustic data could be integrated with other observations to improve monitoring performance.

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

Raytracing Project: Graybody Approximation [Slides]

Graybody approximation is first step to infrared raytracing code. Graybody approximation can capture temperature, but obviously cannot be used for gas species characterization. Graybody approximation will be used for comparisons to experimental data that is integrated across wavenumber.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Advanced Moderator Material Handbook

High hydrogen density moderators such as metal hydrides are an important research topic within the DOE NE Microreactor Research, Development, and Deployment (RD&D) Program due to their ability to retain hydrogen to much higher temperatures than other hydrogenous media. This class of moderators, which includes yttrium dihydride (YH 2 ), thermalizes neutrons in the system such that the overall fuel mass or the required uranium enrichment in the system can be significantly reduced. Knowledge of material properties, both in the as-fabricated and irradiated state, are important to understanding moderator performance during steady-state and transient reactor operation. Provided in this document is the Advanced Moderator Material Handbook, which provides a detailed summary of the literature data on yttrium dihydride, thermomechanical and other property data, and a critical evaluation of that data. This handbook also provides a description of ongoing experiments to understand in-reactor performance, such as irradiations in ATR, as well as nuclear data from an integral critical experiment at NCERC. The majority of this report focuses on measured values but also includes some modeling results for comparison where applicable.

36 MATERIALS SCIENCE↗

High-Accuracy Module Emulators from Physically-Constrained AI Algorithms

Focal Area(s): How do we use AI tools to integrate observations, simulated data and physical and chemical fundamentals (Focal Area 3) into model components (Focal Area 2) that have high accuracy and stability and low computational burden to improve Earth System Predictability? Science Challenge: Earth system modeling of the hydrological cycle involves compute-intensive modules representing complex chemical and physical process. Recently, AI tools that are far less compute intensive have been developed that emulate these modules, but many of these efforts are not yet sufficiently accurate or even stable. We know a lot about the physics and chemistry of earth system processes. The Science Challenge is developing AI tools that not only incorporate observations and simulated data, but also incorporate the physics and chemistry of the process, while still maintaining the compute efficiency.

54 ENVIRONMENTAL SCIENCES↗