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At least 1,045 records · Page 58
All sourcesNASA NTRSDOE OSTI
DOE OSTI2021

DFT Mechanism Studies: Biomimetic 1,4-NADH Chemoselective, Co-factor Regeneration with [Cp*Rh(bpy)H] + , in Tandem with the Biocatalysis Pathways of a Core Model of the (HLADH)-Zn(II) Mediated Enzyme, in the Enantioselective Reduction of Achiral Ketones to Chiral S-Alcohols

In this study, Quantum Chemical (QC) calculations, utilizing Density Functional Theory (DFT), were performed to investigate the mechanistic aspects of the chemoselective catalyzed reaction of [Cp*Rh(bpy)H] + with the biomimetic NAD + analogues, N-benzylnicotinamide triflate, 1, and β-nicotinamide ribose-5'-methyl phosphate, 2, in the conversion to their 1,4-NADH analogues, 1,4-dihydro-N-benzylnicotinamide, 4, and β-1,4-dihydronicotinamide-5'-ribose methyl phosphate, 5. This reaction was in tandem with the 1,4-NADH dependent HLADH-Zn(II)- catalyzed reduction of achiral ketones to chiral S-alcohols. The [Cp*Rh(bpy)H] + complex, and not its equilibrium tautomer, [η 4 -Cp*HRh(bpy)] + , was found to control the hydride transfer during the biomimetic NAD + /1,4-NADH conversion, through the non-covalent interactions of the biomimetic co-factors with [Cp*Rh(bpy)H] + . The thermodynamics and kinetics for the chiral reduction of the Zn(II) bound ketones, 2-pentanone and 4-phenyl-2-butanone, with co-factor, 4, catalyzed by Zn(SCH 3 ) 2 (Imidazole), a core model of the Zn(II)-based catalytic center of HLADH, was also investigated by the evaluation of two possible reaction pathways: (1) formation of a ZnH from the C4-H hydride transfer of co-factor, 4, followed by reaction of the postulated ZnH with the bound 2-pentanone or 4-phenyl-2-butanone substrate, and (2), the direct C4-H transfer to the bound achiral ketone substrates, to provide the dominant chiral alcohols, S-2-pentanol or S-4-phenyl-2-butanol. The latter pathway was found most viable, and DFT calculations also revealed an essential η 2 -coordination of the 5,6 double bond of co-factor, 4, to the HLADH-Zn(II) metal ion center, upon imidazole decomplexation, providing an asymmetric differentiation of S-η 2 -5,6-1,4-NADH-Zn(II) binding. A proposed new paradigm for the Zn(II)'s non-innocent role in the HLADH-Zn(II) biocatalysis reduction mechanism, for enantioselective hydride transfer to a Zn(II) bound ketone, providing S-alcohols.

1,4 NADH co-factors↗
DOE OSTI2026

Probing fundamental constant oscillation in the Galactic Center with S-Star Spectroscopy

Astrophysical spectroscopy provides a powerful probe of spacetime variations of fundamental constants, as atomic and ionic emission and absorption lines depend sensitively on the fine-structure constant. In particular, coherent temporal oscillations induced by an ultralight scalar background produce characteristic, time-resolved signatures that can be robustly disentangled from intrinsic variability. In the Galactic Center, such scalar backgrounds can be substantially enhanced, either through the formation of dense scalar clouds powered by black hole rotational energy extraction or as ultralight scalar dark matter forming a soliton-like core. These scalar configurations generically induce oscillations of the fine-structure constant, with periods set by the scalar mass and spatial profiles determined by the scalar wavefunction and its coupling to the electromagnetic sector. We show that precise, time-resolved spectroscopy of S-stars orbiting the supermassive black hole Sgr A^* provides a sensitive test of these effects, enabling constraints on quadratic scalar-photon couplings in the exceptionally high boson-density environment of the Galactic Center.

Bai, Zhaoyu [Weizmann Inst.] (ORCID:00000002075815↗
DOE OSTI2023

Effect of coherent edge-localized mode on transition to high-performance hybrid scenarios in KSTAR

This paper deals with one of the origins and trigger mechanisms responsible for the observed performance enhancements in the hybrid scenario experiments conducted in Korea Superconducting Tokamak Advanced Research (KSTAR). The major contribution to the performance improvement comes from a broader and higher pedestal formation. The increase of fast ion pressure due to a plasma density decrease also contributes substantially to the global beta. Although the reduced core plasma volume resulting from the pedestal expansion has a negative effect on the core thermal energy, a considerable confinement improvement observed in the inner core region limits the degradation. The one significant characteristic of high-performance discharges is the presence of Coherent Edge-localized Mode (CEM) activity. CEM is triggered during the pedestal recovery phase between typical ELM crashes and has been found to be related to the increase of particle and heat transport. It appears to underlie two commonly observed phenomena in high-performance hybrid scenario discharges in KSTAR; pedestal broadening and continuous density decrease. Despite the associated transport increase, CEM activities can induce performance enhancement. With the pedestal broadening, ELM crashes become delayed and weakened, which, in turn, allows for a higher pedestal. Moreover, the density decrease directly increases fast ion pressure by extending the beam-slowing-down time. The linear gyrokinetic analysis reveals that the increase of fast ions could initiate positive feedback loops, leading to the stabilization of Ion Temperature Gradient mode in the inner core region.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2024

EOR in Shale Resources

This work provides an overview of the research conducted at NETL and the University of Pittsburgh related to improving the perfornace of CO2 huff-and-puff enhanced oil recovery (EOR) in fractured shale and fractured tight formations. CO2-soluble wettability-altering surfactants will be dissolved in high pressure CO2 during the "huff" stages in an attempt to shift the wettability of shale surfaces away from oil-wet toward CO2-wet. Such a change should promote additinal oil recovery during the depressurization of the formation that occurs during the "puff" stages. Surfactant soubility in CO2, CO2-oil IFT, CO2-rock-oil contact angle, and core-scale huff and puff oil recovery results are presented.

Enick, Robert↗
DOE OSTI2022

Occurrences of REE and CM in volcanic ash beds associated with coals in SW Wyoming & NW Colorado

Rare earth elements (REEs) and critical minerals (CMs) are vital components in the nation’s economy, national security, and the further strengthening of our renewable energy capabilities and infrastructure. Recent work has revealed more insight into previously unknown modes of occurrence for REEs, particularly in coal seams and adjacent noncoal sediments, but many data gaps persist. Temporal relationships between coal beds and adjacent tonstiens, ash beds, or other partings are widely recognized but not fully understood. Variations in REE concentration and their direct or indirect association with coal beds are not predictable. This study presents findings from examining lateral and potentially stratigraphic variation of REE and CM occurrences in coals of late Cretaceous and Paleocene age. In this study we collected and examined samples of differing ages both core and coal mine exposures for qualitative x-ray fluorescence (XRF), and multi-element geochemistry. Preliminary XRF data indicates variable levels of light REEs in a core from the Yampa coalfield of Moffat County in northwest Colorado. An absence of similar enrichments in slightly older coals in the Adaville Formation of the Fold and Thrust belt in southwest Wyoming is described from XRF and ICP-MS evaluation. Previous work has shown an association with the Yampa Bed and REE enrichment in coals of the Upper Cretaceous Williams Fork Formation. While not common and widespread, this association suggests that leaching or reworking of the ash bed could lead to elevated REEs in the adjacent coal. We investigate differences between the two data occurringas geologic compositions and post-depositional histories. In-depth petrography and precise geochemistry should reveal data that at the very least will help improve some aspects of the geologic models of coal basins and the effect of an influx of non-coal sediments.

REE, CM, ash, volcanic ash, coal↗
NASA NTRS1972

The development of hurricane Inez, 1966, as shown by satellite nighttime radiometric and daytime television coverage

A complete documentation of Numbus 2 High Resolution infrared Radiometer data and ESSA-1 and 3 television photographs is presented for the life-time of Hurricane Inez, 1966. Ten computer produced radiation charts were analyzed in order to delineate the three dimensional cloud structure during the formative, mature and dissipating stages of this tropical cyclone. Time sections were drawn throughout the storm's life cycle to relate the warm core development and upper level outflow of the storm with their respective cloud canopies, as shown by the radiation data. Aerial reconnaissance weather reports, radar photographs and conventional weather analyses were used to complement the satellite data. A computer program was utilized to accept Nimbus 2 HRIR equivalent blackbody temperatures within historical maximum and minimum sea surface temperature limits over the tropical Atlantic Ocean.

Allison, L. J.↗
NASA NTRS1977

A mini/microcomputer-based land use information system

The paper describes the Multipurpose Interactive NASA Information System (MINIS), a data management system for land-use applications. MINIS is written nearly entirely in FORTRAN IV, and has a full range of conditional, Boolean and arithmetic commands, as well as extensive format control and the capability of interactive file creation and updating. It requires a mini or microcomputer with at least 64 K of core or semiconductor memory. MINIS has its own equation-oriented query language for retrieval from different kinds of data bases. It features a graphics output which permits output of overlay maps. Some experience of the U.S. Department of Agriculture and the Tennessee State Planning Office with MINIS is discussed.

Seitz, R. N.↗
NASA NTRS1988

Experimental studies in vortex pair motion coincident with a liquid reaction

An experimental examination of the coincidence of a liquid reaction (acid/base) with the formation of a vortex pair structure is described in which emphasis is placed on the evolution of the strained diffusion layer and reacted core structures. Flow visualization of the reaction process is achieved via the technique of chemically sensitive LIF. The observed growth of reacted core structures associated with each vortex is compared with theoretically predicted behavior (Marble, 1983; Karagozian and Marble, 1986). Vortex pair separation is also compared with theoretical correlations, and the relevance of the analogy between a fast liquid reaction and a gaseous reaction is discussed.

Karagozian, A. R.↗
NASA NTRS2007

The Jet/Disk Connection in AGN: Chandra and XMM-Newton Observations of Three Powerful Radio-Loud Quasars

The connection between the accretion process that powers AGN and the formation of jets is still poorly understood. Here we tackle this issue using new, deep Chandra and XMM-Newton observations of tlie cores of three powerful radio loud quasars: 1136-135, 1150+497 (Chandra), and 0723+679 (XMM-Newton), in the redshift range z=0.3-0.8. These sources are known from our previous Chandra siiapsliot survey to liave kpc-scale X-ray jets. In 1136-135 and 1150-1+497; evidence is found for the presence of diffuse thermal X-ray emission around the cores; on scales of 40-50 kpc and with luminosity L(sub 0.3-2 kev approx. 10(sup 43) erg per second, suggesting thermal emission from the host galaxy or a galaxy group. The X-ray continua of the cores in the three sources are described by an upward-curved (concave) broken power law, with photon indices GAMMA (sub soft) approx. 1.8 - 2.1 and GAMMA (sub hard) approx. 1.7 below and above approx. equal to 2 keV, respectively. There is evidence for an uiiresolved Fe K alpha line with EW approx. 70 eV in the three quasars. The Spectral Energy Distributions of the sources can be well described by a mix of jet and disk emission, with the jet dominating the radio and hard X-rays (via synchrotron and external Compton) and the disk dominating the optical/UV through soft X-rays. The ratio of the jet-to-disk powers is approx. 1, consistent with those derived for a number of gamma ray emitting blazars. This indicates that near equality of accretion and jet power may be common in powerful radio-loud AGN.

Sambruna, Rita↗
NASA NTRS2003

Terrestrial Planet Formation Around Close Binary Stars

Most stars reside in multiple star systems; however, virtually all models of planetary growth have assumed an isolated single star. Numerical simulations of the collapse of molecular cloud cores to form binary stars suggest that disks will form within such systems. Observations indirectly suggest disk material around one or both components within young binary star systems. If planets form at the right places within such circumstellar disks, they can remain in stable orbits within the binary star systems for eons. We are simulating the late stages of growth of terrestrial planets around close binary stars, using a new, ultrafast, symplectic integrator that we have developed for this purpose. The sum of the masses of the two stars is one solar mass, and the initial disk of planetary embryos is the same as that used for simulating the late stages of terrestrial planet growth within our Solar System and in the Alpha Centauri wide binary star system. Giant planets &are included in the simulations, as they are in most simulations of the late stages of terrestrial planet accumulation in our Solar System. When the stars travel on a circular orbit with semimajor axis of up to 0.1 AU about their mutual center of mass, the planetary embryos grow into a system of terrestrial planets that is statistically identical to those formed about single stars, but a larger semimajor axis and/or a significantly eccentric binary orbit can lead to significantly more dynamically hot terrestrial planet systems.

Lissauer, Jack J.↗
DOE OSTI2023

Recent Advances in Picochlorum renovo Strain Development

Microalgae are amongst the most efficient phototrophs for the reduction of CO2 to industrially relevant products and product intermediates. We have recently identified a novel species in the genus Picochlorum (Picochlorum renovo) that demonstrates high areal productivity (>30 g/m2/day), high temperature and salinity tolerances, and rapid growth rate (-2 hour doubling time): attributes essential for economically viable industrial scale deployment for low value commodities (e.g. fuel and chemical precursors). Following screening of >300 algal isolates to identify Picochlorum renovo, we developed baseline genetic tools necessary for genetic engineering of the nucleus and chloroplast, and further built upon these tools to establish a protein secretion system. We have also deployed genetic engineering tools to establish the utilization of phosphite as a selectable marker in the chloroplast and nuclear genomes, while concurrently acting as a potential crop protection strategy. We have further implemented these tools to enable the utilization of formate as a novel carbon source for phototroph cultivation. Explicitly, formate toxicity was assayed, followed by introduction of a formate dehydrogenase to allow formate utilization. Cultures supplemented with formate grew to a higher density when cultivated under ambient CO2, highlighting the potential for this strategy to increase growth. Additionally, we have established a synthetic transcription factor and core promoter system which lays the foundation for tunable, high expression engineering in the nuclear genome, and potentially can be applied for universal algal genetic engineering. Finally, current work has focused on direct photosynthetic production of chemicals, and generation of mutant libraries. Combined, our work has established a robust genetic toolbox for Picochlorum renovo, which we have deployed for strain development purposes to introduce biotechnologically relevant traits.

algae↗
NASA NTRS1997

Application-Controlled Demand Paging for Out-of-Core Visualization

In the area of scientific visualization, input data sets are often very large. In visualization of Computational Fluid Dynamics (CFD) in particular, input data sets today can surpass 100 Gbytes, and are expected to scale with the ability of supercomputers to generate them. Some visualization tools already partition large data sets into segments, and load appropriate segments as they are needed. However, this does not remove the problem for two reasons: 1) there are data sets for which even the individual segments are too large for the largest graphics workstations, 2) many practitioners do not have access to workstations with the memory capacity required to load even a segment, especially since the state-of-the-art visualization tools tend to be developed by researchers with much more powerful machines. When the size of the data that must be accessed is larger than the size of memory, some form of virtual memory is simply required. This may be by segmentation, paging, or by paged segments. In this paper we demonstrate that complete reliance on operating system virtual memory for out-of-core visualization leads to poor performance. We then describe a paged segment system that we have implemented, and explore the principles of memory management that can be employed by the application for out-of-core visualization. We show that application control over some of these can significantly improve performance. We show that sparse traversal can be exploited by loading only those data actually required. We show also that application control over data loading can be exploited by 1) loading data from alternative storage format (in particular 3-dimensional data stored in sub-cubes), 2) controlling the page size. Both of these techniques effectively reduce the total memory required by visualization at run-time. We also describe experiments we have done on remote out-of-core visualization (when pages are read by demand from remote disk) whose results are promising.

Cox, Michael↗
NASA NTRS1999

MESSENGER, MErcury: Surface, Space ENvironment, GEochemistry, and Ranging; A Mission to Orbit and Explore the Planet Mercury

MESSENGER is a scientific mission to Mercury. Understanding this extraordinary planet and the forces that have shaped it is fundamental to understanding the processes that have governed the formation, evolution, and dynamics of the terrestrial planets. MESSENGER is a MErcury Surface, Space ENvironment, GEochemistry and Ranging mission to orbit Mercury for one Earth year after completing two flybys of that planet following two flybys of Venus. The necessary flybys return significant new data early in the mission, while the orbital phase, guided by the flyby data, enables a focused scientific investigation of this least-studied terrestrial planet. Answers to key questions about Mercury's high density, crustal composition and structure, volcanic history, core structure, magnetic field generation, polar deposits, exosphere, overall volatile inventory, and magnetosphere are provided by an optimized set of miniaturized space instruments. Our goal is to gain new insight into the formation and evolution of the solar system, including Earth. By traveling to the inner edge of the solar system and exploring a poorly known world, MESSENGER fulfills this quest.

Source record↗
NASA NTRS1986

Compositions and textures of relic forsterite in carbonaceous and unequilibrated ordinary chondrites

The compositions and textures of olivines in equilibrated ordinary chondrites, C1, C2, and C3 meteorites are described. The olivines are classified by color into blue, red, or dark olivines. The characteristic features of blue olivines are examined. It is observed that the texture of the olivine: (1) forms cores in single olivine grains; (2) shows subhedral to euhedral boundaries against rim olivines; (3) rarely contains inclusions; (4) has embayments containing olivines similar to that of the rim; and (5) occurs within chondrules. The mode of formation for blue olivines, the relation between blue olivine and high temperature compounds, and modifications in the features of blue olivines are analyzed. It is noted that the olivine is a product of condensation, has been modified by additions of olivine formed from a liquid, and that these olivines represent relic grains that are similar to olivines found in cosmic particles and in cores of some deep sea particles.

Steele, I. M.↗
NASA NTRS1989

Radio wavelength observations of the L134N molecular core

A detailed study of the L134N dense molecular core through radio astronomical observations of spectral lines at millimeter and centimeter wavelengths is presented. The prototypical dark cloud was chosen for the following reasons: it is a nearby cloud at a distance of 160 pc, and thus radio observations have high spatial resolution; it resides out of the galactic disk, providing unobscured viewing along the line of sight; and it is known to be a rich source of molecular emission. The absence af any embedded infrared sources leads to the assumption that L134N is either in a stage of evolution prior to star formation or is a cloud in which internal support will prohibit a star from forming. A spectral line survey of 24 molecular transitions at up to seven positions in the L134N core, and observations of molecular emission from C18O, CSm, H13CO+, SO, NH3, and C3H2 are reviewed. Results indicate different spatial distributions for each species which may be attributed to variations in the excitation conditions for each transition or chemical abundance variations within the cloud core. Observational techniques and results are presented.

Swade, Daryl A.↗
DOE OSTI2025

From capture to collapse: Revisiting black hole formation by fermionic asymmetric dark matter in neutron stars

Fermionic asymmetric dark matter (ADM) can be captured in neutron stars (NSs) via scatterings with the star constituents. The absence of dark matter annihilation due to its asymmetric nature leads to ADM accumulation in the NS core, potentially reaching densities sufficient to exceed the Chandrasekhar limit and trigger its gravitational collapse into a black hole (BH), eventually consuming the NS from within. Therefore, the existence and observation of old neutron stars provide a means to constrain the properties of ADM. We revisit previous constraints on the mass and scattering cross section off neutrons of fermionic ADM across a class of models. We critically examine common simplifying approximations used in the literature to derive these limits. Our analysis includes improved treatments of dark matter capture, thermalization, BH formation, accretion, and evaporation. We find that previous results can be relaxed by a few orders of magnitude once these effects are properly accounted for.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2021

Improving scalability of electronic structure code for molecular simulations in the presence of environment

A scalable density functional electronic code with Gaussian basis set, called UTEP-NRLMOL, is developed to perform simulations of molecular systems in the presence of the environment with particular attention to the memory requirements. In the electronic structure calculations, the memory and computation time are proportional to the number of atoms. Memory requirements for density functional calculations scale as N*N, where N is the number of atoms. While the recent advances in HPC offer platforms with large numbers of cores, the limited amount of memory available on a given node and poor scalability of the electronic structure codes hinder their efficient usage of these platforms. We have introduced new scaling and parallelization paradigms using MPI-3 shared-memory functionality combined with usage of sparse algebra and storage of matrices in sparse format. This extends the range of applicability of the UTEP-NRLMOL code to large systems over 10,000 atoms, or using up to 67,000 basis functions, and making use of HPC architectures using over 6,000 processors utilizing all available cores. We have also interfaced code with effective fragment potential and polarizable continuum model libraries. The code was used in simulations of several applications which are published in reputed scientific journals.

74 ATOMIC AND MOLECULAR PHYSICS↗