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At least 1,045 records · Page 58

Resolving the Impact of Hydrogen Bonding on the Phylloquinone Cofactor through Two-Dimensional Infrared Spectroscopy

Phylloquinone (PhQ) is a molecule involved in photosynthetic electron transfer, where the local protein environment is known to tune the properties of PhQ through various noncovalent interactions. In this work, we determine how hydrogen bonding, one of these noncovalent interactions, alters the vibrational potential energy surface of PhQ. In addition, this work demonstrates how hydrogen bonding to PhQ manifests in ultrafast multidimensional vibrational spectra, which is an important step towards using ultrafast vibrational based spectroscopies to probe PhQ embedded in the binding pocket of photosynthetic reaction centers.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Doppler spectra from ARM Doppler Lidar during ARMing the Edge

There is a need for long-term observations of cloud and precipitation fall speeds in validating and improving rainfall forecasts from climate models. To this end, the U.S. Department of Energy Atmospheric Radiation Measurement (ARM) user facility Southern Great Plains (SGP) site at Lamont, Oklahoma, hosts five ARM Doppler lidars that can measure cloud and aerosol properties. In particular, the ARM Doppler lidars record Doppler spectra that contain information about the fall speeds of cloud and precipitation particles. In this dataset, we provide the Doppler spectra from the ARM Doppler lidar at C1 recorded in April 2022 during ARMing the Edge.

54 ENVIRONMENTAL SCIENCES↗

Hund bands in spectra of multiorbital systems

Spectroscopy experiments are routinely used to characterize the behavior of strongly correlated systems. An in-depth understanding of the different spectral features is thus essential. Here, we show that the spectrum of the multiorbital Hubbard model exhibits unique Hund bands that occur at energies given only by the Hund coupling J H , as distinct from the Hubbard satellites following the interaction U. We focus on experimentally relevant single-particle and optical spectra that we calculate for a model related to iron chalcogenide ladders. The calculations are performed via the density-matrix renormalization group and Lanczos methods. Finally, the generality of the implications is verified by considering a generic multiorbital model within dynamical mean-field theory.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Impact of penetrating collisions of plasma ions on spectral line shapes

Spectral-line-broadening models have been moving towards including full Coulomb interactions between the atom and plasma, replacing the commonly used dipole approximation. The effects of the full Coulomb interaction have been thoroughly explored for plasma electrons, resulting in redshifts of spectral lines in high-energy-density plasmas. We explore the impact of a full Coulomb treatment on ion broadening. Penetrating collisions due to ions do not significantly impact the linewidths. The most significant aspect is the appearance of quasimolecular resonances in the far line wings, such as those previously observed in white-dwarf spectra. We identify several problems with the existing models. The most direct implementation causes the quasimolecular features to appear at the wrong photon energies. It is possible to include the detailed molecular structure, but this currently requires the Anderson-Talman approximation, which ignores the N-body properties of the plasma. We find that N-body effects can substantially broaden these quasimolecular features and even shift them, depending on the plasma conditions. We conclude that penetration of ions into the spatial extent of the radiator wave function does not strongly affect the usual diagnostics and may have a moderate to weak effect on opacity. Furthermore, the Rosseland mean opacity is weighted towards low-opacity regions of a spectrum, where these quasimolecular features are found.

79 ASTRONOMY AND ASTROPHYSICS↗

Amplitude-mode spectroscopy of chemically injected and photogenerated charge carriers in semiconducting single-walled carbon nanotubes

In one-dimensional semiconductors such as conjugated polymers and semiconducting single-walled carbon nanotubes (s-SWCNTs), injected charge carriers (electrons or holes) can have profound impacts on both electronic conductivity and optical spectra, even at low carrier densities. Understanding charge-related spectral features is a key fundamental challenge with important technological implications. Here, we employ a systematic suite of experimental and theoretical tools to understand the mid-infrared charge signatures of heavily p-type doped polymer-wrapped s-SWCNTs. Across a broad range of nanotube diameters, we find that hole charge carriers induce strong Fano anti-resonances in mid-infrared transmission spectra that correspond to defect-related (D-band) and in-plane tangential (G-band) Raman-active vibrational modes, along with anti-resonances arising from infrared (IR)-active polymer and SWCNT modes. We employ 13C isotope-labeled s-SWCNTs and a removable wrapping polymer to clarify the relative intensities, energies, and sources of all observed anti-resonances. Simulations performed with the "amplitude mode model" are used to quantitatively reproduce Raman spectra and also help to explain the outsized intensity of the D-band anti-resonance, relative to the G-band, observed for both moderately and degenerately doped s-SWCNTs. Here, the results provide a framework for future studies of ground- and excited-state charge carriers in s-SWCNTs and a variety of low-dimensional materials.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Detecting and Characterizing Mg ii Absorption in DESI Survey Validation Quasar Spectra

Abstract We present findings of the detection of Magnesium II (Mg ii , λ = 2796, 2803 Å) absorbers from the early data release of the Dark Energy Spectroscopic Instrument (DESI). DESI is projected to obtain spectroscopy of approximately 3 million quasars (QSOs), of which over 99% are anticipated to be at redshifts greater than z > 0.3, such that DESI would be able to observe an associated or intervening Mg ii absorber illuminated by the background QSO. We have developed an autonomous supplementary spectral pipeline that detects these systems through an initial line-fitting process and then confirms the line properties using a Markov Chain Monte Carlo sampler. Based upon a visual inspection of the resulting systems, we estimate that this sample has a purity greater than 99%. We have also investigated the completeness of our sample in regard to both the signal-to-noise properties of the input spectra and the rest-frame equivalent width ( W 0 ) of the absorber systems. From a parent catalog containing 83,207 quasars, we detect a total of 23,921 Mg ii absorption systems following a series of quality cuts. Extrapolating from this occurrence rate of 28.8% implies a catalog at the completion of the five-year DESI survey that will contain over eight hundred thousand Mg ii absorbers. The cataloging of these systems will enable significant further research because they carry information regarding circumgalactic medium environments, the distribution of intervening galaxies, and the growth of metallicity across the redshift range 0.3 ≤ z < 2.5.

79 ASTRONOMY AND ASTROPHYSICS↗

Measurements of dielectron production in Au + Au collisions at s N N = 27 , 39, and 62.4 GeV from the STAR experiment

We report systematic measurements of dielectron (e + e – ) invariant-mass M ee spectra at midrapidity in Au + Au collisions at s N N = 27 = 27, 39, and 62.4 GeV taken with the STAR detector at the Relativistic Heavy Ion Collider. For all energies studied, a significant excess yield of dielectrons is observed in the low-mass region ( 0.40 < M ee < 0.75 MeV / c 2 ) compared to hadronic cocktail simulations at freeze-out. Models that include an in-medium broadening of the ρ -meson spectral function consistently describe the observed excess. In addition, we report acceptance-corrected dielectron-excess spectra for Au + Au collisions at midrapidity ( |y ee | < 1) in the 0–80% centrality bin for each collision energy. The integrated excess yields for 0.4 < M ee < 0.75 GeV / c 2 , normalized by the charged particle multiplicity at midrapidity, are compared with previously published measurements for Au + Au at s N N = 27 = 19.6 and 200 GeV. Models that include an in-medium broadening of the ρ -meson spectral function consistently describe the observed excess. Furthermore, the normalized excess yields in the low-mass region show no significant collision energy dependence. The data, however, are consistent with model calculations that demonstrate a modest energy dependence.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Development of an Optical Library for Coevaporated CdSe x Te 1– x

The conversion efficiency of CdTe solar cells may be improved by bandgap engineering, i.e., changing the bandgap value through the addition of Se in the absorber. The Se alloying enables a short-circuit current density improvement, as it leads to a bandgap energy value decrease. Furthermore, it has been associated with increased minority carrier lifetimes, assuring high open-circuit voltage values. An Se gradient profile control can further optimize the solar cell performance. Thus, an optical model baseline of the CdSe x Te 1–x (CST) compound was developed. Spectroscopic ellipsometry measurements were conducted to accurately extract the optical constants of ten CST layers deposited through coevaporation with x varying from 0 to 1. Using the measured dielectric function spectra from the discrete CST layers with varying x, and considering the composition-induced shift in the critical point energies, an energy-shift model was employed to develop the accurate optical library for the CST compound for any x value to provide data for future modeling and optimization. Furthermore, the library accuracy was validated through optical simulations of the quantum efficiency of a graded CST solar cell using the finite-difference time-domain method by replicating the Se profile in the absorber layer measured through secondary ion mass spectrometry.

14 SOLAR ENERGY↗

Understanding flavin electronic structure and spectra

Abstract Flavins have emerged as central to electron bifurcation, signaling, and countless enzymatic reactions. In bifurcation, two electrons acquired as a pair are separated in coupled transfers wherein the energy of both is concentrated on one of the two. This enables organisms to drive demanding reactions based on abundant low‐grade chemical fuel. To enable incorporation of this and other flavin capabilities into designed materials and devices, it is essential to understand fundamental principles of flavin electronic structure that make flavins so reactive and tunable by interactions with protein. Emerging computational tools can now replicate spectra of flavins and are gaining capacity to explain reactivity at atomistic resolution, based on electronic structures. Such fundamental understanding can moreover be transferrable to other chemical systems. A variety of computational innovations have been critical in reproducing experimental properties of flavins including their electronic spectra, vibrational signatures, and nuclear magnetic resonance (NMR) chemical shifts. A computational toolbox for understanding flavin reactivity moreover must be able to treat all five oxidation and protonation states, in addition to excited states that participate in flavoprotein's light‐driven reactions. Therefore, we compare emerging hybrid strategies and their successes in replicating effects of hydrogen bonding, the surrounding dielectric, and local electrostatics. These contribute to the protein's ability to modulate flavin reactivity, so we conclude with a survey of methods for incorporating the effects of the protein residues explicitly, as well as local dynamics. Computation is poised to elucidate the factors that affect a bound flavin's ability to mediate stunningly diverse reactions, and make life possible. This article is categorized under: Structure and Mechanism > Computational Biochemistry and Biophysics Electronic Structure Theory > Combined QM/MM Methods Theoretical and Physical Chemistry > Spectroscopy

59 BASIC BIOLOGICAL SCIENCES↗

Dark matter spectra from the electroweak to the Planck scale

We compute the decay spectrum for dark matter (DM) with masses above the scale of electroweak symmetry breaking, all the way to the Planck scale. For an arbitrary hard process involving a decay to the unbroken standard model, we determine the prompt distribution of stable states including photons, neutrinos, positrons, and antiprotons. These spectra are a crucial ingredient in the search for DM via indirect detection at the highest energies as being probed in current and upcoming experiments including IceCube, HAWC, CTA, and LHAASO. Our approach improves considerably on existing methods, for instance, we include all relevant electroweak interactions.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Excited state electronic structure of dimethyl disulfide involved in photodissociation at ∼200 nm

Dimethyl disulfide (DMDS), one of the smallest organic molecules with an S–S bond, serves as a model system for understanding photofragmentation in polypeptides and proteins. Prior studies of DMDS photodissociation excited at ∼266 nm and ∼248 nm have elucidated the mechanisms of S–S and C–S bond cleavage, which involve the lowest excited electronic states S 1 and S 2 . Far less is known about the dissociation mechanisms and electronic structure of relevant excited states of DMDS excited at ∼200 nm. Herein we present calculations of the electronic structure and properties of electronic states S 1 –S 6 accessed when DMDS is excited at ∼200 nm. Our analysis includes a comparison of theoretical and experimental UV spectra, as well as theoretically predicted one-dimensional cuts through the singlet and triplet potential energy surfaces along the S–S and C–S bond dissociation coordinates. Finally, we present calculations of spin–orbit coupling constants at the Franck–Condon geometry to assess the likelihood of ultrafast intersystem crossing. We show that choosing an accurate yet computationally efficient electronic structure method for calculating the S 0 –S 6 potential energy surfaces along relevant dissociation coordinates is challenging due to excited states with doubly excited character and/or mixed Rydberg-valence character. Our findings demonstrate that the extended multi-state complete active space second-order perturbation theory (XMS-CASPT2) balances this computational efficiency and accuracy, as it captures both the Rydberg character of states in the Franck–Condon region and multiconfigurational character toward the bond-dissociation limits. In conclusion, we compare the performance of XMS-CASPT2 to a new variant of equation of motion coupled cluster theory with single, double, and perturbative triple corrections, EOM-CCSD(T)(a)*, finding that EOM-CCSD(T)(a)* significantly improves the treatment of doubly excited states compared to EOM-CCSD, but struggles to quantitatively capture asymptotic energies along bond dissociation coordinates for these states.

Rishi, Varun↗

Predicting nonresonant pressure-driven MHD modes in equilibria with low magnetic shear

Nonresonant internal modes can be difficult to anticipate as there is no resonant surface in the plasma. However, equilibria that are unstable to multiple nonresonant magnetohydrodynamic (MHD) modes may be more prone to global loss of confinement since these instabilities generate spatially extended linear displacements, potentially enhancing magnetic field line chaos via nonlinear interactions. Here, we successfully predict the unstable nonresonant pressure-driven modes for equilibria with zero shear in the plasma core, irrational q on axis, and a central pressure gradient, which is consistent with pre-crash profiles in sawtoothing tokamak plasmas in the large-aspect-ratio limit. A criterion for identifying nonresonant modes most likely to be unstable is developed from the convergents of the continued fraction representation of q 0 . A higher-order analysis of the standard Energy Principle reveals the conditions under which these modes are expected to dominate. Linear growth rate spectra, as a function of toroidal mode number (up to n = 30), calculated using the initial-value extended-MHD code, M3D-C1, recover the characteristic dependence observed for ideal infernal modes. Nonresonant modes have also been invoked in some ideal sawtooth crash models. Finally, this work provides a mechanism to predict the mode numbers of infernal modes and, potentially, the width of some post-sawtooth-crash profiles.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Crystal response measurement of the x-ray transmission crystals used by the Imaging Spectroscopy Snout at the National Ignition Facility

The Imaging Spectroscopy Snout (ISS) used at the National Ignition Facility is able to simultaneously collect neutron pinhole images, 1D spatially resolved x-ray spectra, and time resolved x-ray pinhole images. To measure the x-ray spectra, the ISS can be equipped with up to four different transmission crystals, each offering different energy ranges from ∼7.5 to ∼12 keV and different resolutions. Characterizing and calibrating such instruments is of paramount importance in order to extract meaningful results from experiments. More specifically, we characterized different ISS transmission-type alpha-Quartz crystals by measuring their responses as a function of photon energy, from which we inferred the angle-integrated reflectivity for each crystal’s working reflections. These measurements were made at the Lawrence Livermore National Laboratory calibration station dedicated to the characterization of x-ray spectrometers. The sources used covered a wide x-ray range—from a few to 30 keV; the source diameter was ∼0.6 mm. The experimental results are discussed alongside theoretical calculations using the pyTTE model.

Dozieres, M. (ORCID:0000000286401459)↗

X-ray spectroscopy of multi-temperature plasmas using the differential emission measure formalism

We present a theoretical construct that nominally underlies spectroscopic data analysis of multi-temperature plasmas, known as the differential emission measure (DEM). From a data analytic perspective, the DEM formalism is used to derive temperature distributions from line spectra that are formed in the presence of temperature gradients and by time integrations of evolving plasmas. From a modeling perspective, DEMs are convenient intermediaries between radiation hydrodynamics simulations and spectroscopic measurements acquired in the laboratory. The DEM concept and its associated methodologies were originally developed by spectroscopists working with astrophysical data. We borrow from these earlier investigations. In this manuscript, intended primarily as a tutorial, we discuss the basic concepts, but also augment various aspects of the theory by the way of extension and example, including a detailed treatment of various weighting and averaging schemes, intended to mitigate ambiguities that often arise when reporting temperature information. We focus on high-temperature plasmas that are not in local thermodynamic equilibrium and the x-ray spectra that they produce, although the core ideas presented here are applicable to spectroscopy in other energy bands. A few examples involving the derivation and manipulation of model DEMs in simple geometries are provided.

Liedahl, Duane A. [Lawrence Livermore National Lab↗

Unsupervised Learning for Improved Gamma-Ray Spectrometry in Pixelated Cadmium Zinc Telluride (CZT) Detectors

Machine learning has been found to be ubiquitously useful across many industries, presenting an opportunity to improve radiation detection performance using data-driven algorithms. Improved detector resolution can aid in the detection, identification, and quantification of radionuclides. Here, in this work, a novel, data-driven, unsupervised learning approach is developed to improve detector spectral characteristics by learning, and subsequently rejecting, poorly performing regions of the pixelated detector. Feature engineering is used to fit individual characteristic photo peaks to a Doniach lineshape with a linear background model. Then, principal component analysis is used to learn a lower-dimension latent space representation of each photo peak where the pixels are clustered, and subsequently ranked, based on the cluster mean distance to an optimal point. Pixels within the worst cluster(s) are rejected to improve the full-width at half-maximum (FWHM) by 10% to 15% (relative to the bulk detector) at 50% net efficiency when applied to training data obtained from measurements of a 100 μCi 154 Eu source using a H3D M400i pixelated cadmium zinc telluride detector. These results compare well with, but do not outperform, a greedy algorithm that accumulates pixels in order of FWHM from lowest to highest used as a benchmark. In the future, this approach can be extended to include the detector energy and angular response. Finally, the model is applied to newly seen natural and enriched uranium spectra relevant for nuclear safeguards applications.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Constraints on redshifts of blazars from extragalactic background light attenuation using Fermi - LAT data

ABSTRACT The extragalactic high-energy γ-ray sky is dominated by blazars, which are active galactic nuclei with their jets pointing towards us. Distance measurements are of fundamental importance yet for some of these sources are challenging because any spectral signature from the host galaxy may be outshone by the non-thermal emission from the jet. In this paper, we present a method to constrain redshifts for these sources that relies only on data from the Large Area Telescope on board the Fermi Gamma-ray Space Telescope. This method takes advantage of the signatures that the pair-production interaction between photons with energies larger than approximately 10 GeV and the extragalactic background light leaves on γ-ray spectra. We find upper limits for the distances of 303 γ-ray blazars, classified as 157 BL Lacertae objects, 145 of uncertain class, and 1 flat-spectrum-radio quasar, whose redshifts are otherwise unknown. These derivations can be useful for planning observations with imaging atmospheric Cherenkov telescopes and also for testing theories of supermassive black hole evolution. Our results are applied to estimate the detectability of these blazars with the future Cherenkov Telescope Array, finding that at least 21 of them could be studied in a reasonable exposure of 20 h.

Astronomy & Astrophysics↗

Visualizing Anisotropic Oxygen Diffusion in Ceria under Activated Conditions

Oxygen reactivity plays a key role in the performance of ceria-based catalysts. Aberration-corrected transmission electron microscopy and molecular dynamics simulations were used to study the oxygen atom diffusion in ceria under activated conditions. Reactive oxygen atom and its real-time diffusion were visualized. Additionally, the interplay between cerium and oxygen atoms originating from a Coulomb interaction was revealed by the out-of-plane buckling of cerium atoms associated with oxygen transport. Anisotropic oxygen atom diffusion that depends on crystal orientations was discovered, demonstrating a preferential [001] crystallographic diffusion pathway. These findings reveal prospects for applications of anisotropic orientation-relevant fluorite-structured oxides.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Total absorption spectroscopy of two isomers in 70 Cu influencing nucleosynthesis signatures

Isomers have long been known to be important for astrophysical nucleosynthesis processes, yet they are often neglected in network calculations due to computational limitations or lack of data. "Astromers" are astrophysically metastable nuclear states that can greatly impact nucleosynthesis pathways. In this work we show that astromers further impact the time-dependent electromagnetic signal during heavy element nucleosynthesis. In an experiment performed at the National Superconducting Cyclotron Laboratory, three 𝛽-decaying states of 70 Cu (6 − ground state, and two isomeric states: 3 − and 1 + ) were produced. 𝛽-feeding values were extracted from experimental spectra and compared to shell-model and QRPA+PVC calculations. Here, average 𝛾-ray energies from the 𝛽-decay events were incorporated into simulations of heavy element nucleosynthesis and were found to exhibit different energy release profiles over time, which may impact, in aggregate, time-dependent observable signals.

59 ≤ A ≤ 89↗