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At least 1,045 records · Page 58

Real time monitoring of COVID-19 intervention effectiveness through contact tracing data

Communities worldwide have used vaccines and facemasks to mitigate the COVID-19 pandemic. When an individual opts to vaccinate or wear a mask, they may lower their own risk of becoming infected as well as the risk that they pose to others while infected. The first benefit–reducing susceptibility–has been established across multiple studies, while the second–reducing infectivity–is less well understood. Using a new statistical method, we estimate the efficacy of vaccines and facemasks at reducing both types of risks from contact tracing data collected in an urban setting. We find that vaccination reduced the risk of onward transmission by 40.7% [95% CI 25.8–53.2%] during the Delta wave and 31.0% [95% CI 19.4–40.9%] during the Omicron wave and that mask wearing reduced the risk of infection by 64.2% [95% CI 5.8–77.3%] during the Omicron wave. By harnessing commonly-collected contact tracing data, the approach can broadly provide timely and actionable estimates of intervention efficacy against a rapidly evolving pathogen.

60 APPLIED LIFE SCIENCES↗

Patch-Based Convolutional Neural Networks for Multiple Microstructural Features Detection in FIB-SEM Micrographs of Irradiated Nuclear Fuel

Focused ion beam scanning electron microscopy (FIB-SEM) tomography has increasingly been utilized for acquiring three-dimensional (3D) microstructure features at the sub-micron scale in irradiated nuclear materials. This technique involves sequential ion beam slicing followed by electron beam imaging and compositional mapping using energy dispersive spectroscopy (EDS). Despite its growing use, several challenges persist. These include the time-intensive nature of data collection of EDS data, difficulties in distinguishing between various microstructures, and issues with image alignment. These challenges currently limit the broader application of FIB-SEM tomography in the field. To overcome these limitations, we propose using convolutional neural networks (CNNs) to automate microstructure identification in SEM images. Our study introduces a new framework for identifying microstructures in irradiated U-10Zr (wt. %) metallic fuel with limited annotated data. The framework includes the creation of a reliable annotated dataset with paired SEM and ground truth data from EDS maps, the applications of CNNs for microstructure identification, and the validation of model performance. Specifically, we employed the Segment Anything Model (SAM) to align SEM images with corresponding EDS maps and focused ion beam (FIB) tomography SEM data. We evaluate several models, including Patch-based U-Net, Attention U-Net, and Residual U-Net, finding that patch-based U-Net exhibits superior segmentation performance and consistency. This approach reduces reliance on EDS detectors and aids in accelerating nuclear material analysis process, highlighting the potential of advanced deep learning techniques to improve microstructural understanding in nuclear material. This is the first framework to integrate SAM and Patch-based CNN models for semantic segmentation of irradiated nuclear materials, with potential applicability to other tomography datasets.

36 - MATERIALS SCIENCE↗

High performance FPGA embedded system for machine learning based tracking and trigger in sPhenix and EIC

We present a comprehensive end-to-end pipeline to classify triggers versus background events in this paper. This pipeline makes online decisions to select signal data and enables the intelligent trigger system for efficient data collection in the Data Acquisition System (DAQ) of the upcoming sPHENIX and future EIC (Electron-Ion Collider) experiments. Starting from the coordinates of pixel hits that are lightened by passing particles in the detector, the pipeline applies three-stage of event processing (hits clustering, track reconstruction, and trigger detection) and labels all processed events with the binary tag of trigger versus background events. The pipeline consists of deterministic algorithms such as clustering pixels to reduce event size, tracking reconstruction to predict candidate edges, and advanced graph neural network-based models for recognizing the entire jet pattern. In particular, we apply the message-passing graph neural network to predict links between hits and reconstruct tracks and a hierarchical pooling algorithm (DiffPool) to make the graph-level trigger detection. We obtain an impressive performance (≥70% accuracy) for trigger detection with only 3200 neuron weights in the end-to-end pipeline. We deploy the end-to-end pipeline into a field-programmable gate array (FPGA) and accelerate the three stages with speedup factors of 1152, 280, and 21, respectively.

Instruments & Instrumentation↗

Inertia Estimation and Trend Analysis of the United States Power Grid Interconnections

The transition from conventional to modern power systems is causing an increase in integration of inverter-based resources (IBRs). This generally leads to a decrease in total system inertia, which in-turn increases the system’s rate-of-change-of-frequency (RoCoF) during disturbances. This poses a threat to the frequency stability of the system and may falsely trigger protective devices. To monitor system status and plan for integrating renewable energy sources like photovoltaic, wind, and energy storage systems, a realistic study of inertia estimation and analysis in the United States (US) over the past decade is needed. This paper uses field-measured phasor measurement unit (PMU) data collected throughout the US from 2013 to 2023 via the Frequency Monitoring Network (FNET/GridEye) operated by the University of Tennessee, Knoxville (UTK) and Oak Ridge National Laboratory (ORNL). The collected PMU frequency data is utilized to estimate the system inertia of the three US interconnections: Eastern, Western, and Texas. Various RoCoF time windows are investigated for estimating the inertia of each interconnection by maximizing the correlation coefficient between the measured RoCoF and power mismatch. The resulting inertia trends over the past decade show approximately a 6% decline in inertia in the Eastern interconnection, a 15% decline in inertia in the Western interconnection, and a 16% increase in inertia in Texas. Key insights into how inertia is changing amidst the complex energy landscape are extracted using the fuel mix trend data. This provides valuable information for future energy strategies and planning.

30 DIRECT ENERGY CONVERSION↗

From Qualitative to Quantitative AOP: A Case Study of Neurodegeneration

Adverse outcome pathways (AOPs) include a sequence of events that connect a molecular-level initiating event with an adverse outcome at the cellular level for human health endpoints, or at the population level for ecological endpoints. When there is enough quantitative understanding of the relationships between key events in an AOP, a mathematical model may be developed to connect key events in a quantitative AOP (qAOP). Ideally, a qAOP will reduce the time and resources spent for chemical toxicity testing and risk assessment and enable the extrapolation of data collected at the molecular-level by in vitro assays, for example, to predict whether an adverse outcome may occur. Here, we review AOPs in the AOPWiki, an AOP repository, to determine best practices that would facilitate conversion from AOP to qAOP. Then, focusing on a particular case study, acetylcholinesterase inhibition leading to neurodegeneration, we describe specific methods and challenges. Examples of challenges include the availability and collection of quantitative data amenable to model development, the lack of studies that measure multiple key events, and model accessibility or transferability across platforms. We conclude with recommendations for improving key event and key event relationship descriptions in the AOPWiki that facilitate the transition of qualitative AOPs to qAOPs.

Sinitsyn, Dennis↗

Science subsystem

Instrumentation of science subsystem of Mariner- Mars 1964 mission - data collection instruments and data processing

SPACECRAFT INSTRUMENTATION↗

Earth Observatory Satellite system definition study. Report 5: System design and specifications. Volume 5: Specification for EROS operations control center

The functional, performance, and design requirements for the Operations Control Center (OCC) of the Earth Observatory Satellite (EOS) system are presented. The OCC controls the operations of the EOS satellite to acquire mission data consisting of: (1) thematic mapper data, (2) multispectral scanner data on EOS-A, or High Resolution Pointable Imager data on EOS-B, and (3) data collection system (DCS) data. The various inputs to the OCC are identified. The functional requirements of the OCC are defined. The specific systems and subsystems of the OCC are described and block diagrams are provided.

Source record↗

State criminal justice telecommunications (STACOM). Volume 1: Executive summary

Techniques for identifying user requirements and network designs for criminal justice networks on a state wide basis are discussed. Topics covered include: methods for determining data required; data collection and survey; data organization procedures, and methods for forecasting network traffic volumes. Developed network design techniques center around a computerized topology program which enables the user to generate least cost network topologies that satisfy network traffic requirements, response time requirements and other specified functional requirements. The developed techniques were applied in Texas and Ohio, and results of these studies are presented.

Fielding, J. E.↗

Development of a bedrest muscle stress apparatus

In attempting further to define the deleterious effects of spaceflight on the human body, measurement systems and techniques were devised to determine the loss of skeletal muscle strength and tone as a result of spaceflight exposure. In order to determine how the muscle degradation process progresses with time during nonuse, a system for measuring muscle stress during bedrest was developed. The Bedrest Muscle Stress Apparatus is configured to slip snugly over the foot board of a standard hospital bed. Data collected with this device correlated well with pre- and post-bedrest data collected with the original skeletal muscle stress apparatus.

Booher, C. R.↗

Post senescent grass canopy remote sensing

Analysis of in situ collected spectral reflectance data from a dormant or senescent grass canopy showed a direct relationship existed between spectral reflectance and biomass for the 0.50-0.80 micron spectral region. The data, collected four weeks after the end of the growing season, indicated that post senescent remote sensing of grass canopy biomass is possible and helps to elucidate the spectral contribution of recently dead vegetation in mixed live/dead canopy situations.

Tucker, C. J.↗

Dual charge-coupled device /CCD/, astronomical spectrometer and direct imaging camera. II - Data handling and control systems

The data collection system for the MASCOT (MIT Astronomical Spectrometer/Camera for Optical Telescopes) is described. The system relies on an RCA 1802 microprocessor-based controller, which serves to collect and format data, to present data to a scan converter, and to operate a device communication bus. A NOVA minicomputer is used to record and recall frame images and to perform refined image processing. The RCA 1802 also provides instrument mode control for the MASCOT. Commands are issued using STOIC, a FORTH-like language. Sufficient flexibility has been provided so that a variety of CCDs can be accommodated.

Dewey, D.↗

Creep testing of foil-gage metals at elevated temperature using an automated data acquisition system

A method is being developed to obtain creep data on foil gage metals at elevated temperatures using an automated data acquisition system in conjunction with a mechanically counter balanced extensometer. The automated system components include the Hewlett-Packard (HP) 9845A desktop computer, the HP 3455A digital voltmeter and the HP 3495A scanner. Software for test monitoring and data collection was developed; data manipulation, including curve plotting was done with a HP regression analysis software package. Initial creep tests were conducted on .003 in. thick foil specimens of Ti-6A1-4V at temperatures of 800 F and 1000 F and at stress levels of 25 ksi and 45 ksi. For comparison, duplicate tests were run on .049 in. thick specimens sheet of the same alloy. During testing, the furnace and specimen temperature, bridge voltage, strain and load output were automatically monitored and recorded at predetermined intervals. Using the HP regression analysis program, recorded strain output was plotted as a function of time. These resultant creep curves indicate that, under similar conditions of temperature and stress, foil gage specimens exhibit a higher creep rate than sheet specimens.

Blackburn, L. B.↗

Pyrotechnic shock: A literature survey of the Linear Shaped Charge (LSC)

Linear shaped charge (LSC) literature for the past 20 years is reviewed. The following topics are discussed: (1) LSC configuration; (2) LSC usage; (3) LSC induced pyroshock; (4) simulated pyrotechnic testing; (5) actual pyrotechnic testing; (6) data collection methods; (7) data analysis techniques; (8) shock reduction methods; and (9) design criteria. Although no new discoveries have been made in LSC research, charge shapes are improved to allow better cutting performance, testing instrumentation is refined, and some new explosives, for use in LSC, are formulated.

Smith, J. L.↗

Laser Links for Instrumentation Systems

Laser Links eliminate costly cables connecting sensors to data-collection centers. Data-transmission scheme uses laser-based communication systems instead of cables. Sensor data transmitted by semiconductor-diode lasers effective over line-of-sight distances of up to several hundred meters. Use of lasers instead of cables simplifies number of installations.

Bailey, P. S.↗

Bio-optical profile data report coastal transition zone program, R/V Thomas Washington, June 24 - July 21, 1988

Twenty-three vertical profiles of the bio-optical properties of the ocean were made during a research cruise on the R/V Thomas Washington, June 24 to July 21, 1988, as part of the Coastal Transition Zone Program off Point Arena, California. A summary is given, to provide investigators with an overview of the data collected. The entire data set is available in digital form for interested researchers.

Davis, Curtiss O.↗

Bio-optical profile data report coastal transition zone program, R/V Point Sur, June 15-28, 1987

Twenty vertical profiles of the bio-optical properties of the ocean were made during a research cruise on the R/V Point Sur, June 15 to 28, 1987, as part of the Coastal Transition Zone Program off Point Arena, California. Extracted chlorophyll values were also measured at some stations to provide calibration data for the in situ fluorometer. This summary provides investigators with an overview of the data collected. The entire data set is available in digital form.

Davis, Curtiss O.↗

Autonomous support for microorganism research in space

A preliminary design for performing on orbit, autonomous research on microorganisms and cultured cells/tissues is presented. An understanding of gravity and its effects on cells is crucial for space exploration as well as for terrestrial applications. The payload is designed to be compatible with the Commercial Experiment Transporter (COMET) launch vehicle, an orbiter middeck locker interface, and with Space Station Freedom. Uplink/downlink capabilities and sample return through controlled reentry are available for all carriers. Autonomous testing activities are preprogrammed with in-flight reprogrammability. Sensors for monitoring temperature, pH, light, gravity levels, vibrations, and radiation are provided for environmental regulation and experimental data collection. Additional experimental data acquisition includes optical density measurement, microscopy, video, and film photography. On-board full data storage capabilities are provided. A fluid transfer mechanism is utilized for inoculation, sampling, and nutrient replenishment of experiment cultures. In addition to payload design, representative experiments were developed to ensure scientific objectives remained compatible with hardware capabilities. The project is defined to provide biological data pertinent to extended duration crewed space flight including crew health issues and development of a Controlled Ecological Life Support System (CELSS). In addition, opportunities are opened for investigations leading to commercial applications of space, such as pharmaceutical development, modeling of terrestrial diseases, and material processing.

Fleet, Mary L.↗

Autonomous support for microorganism research in space

A preliminary design for performing on-orbit, autonomous research on microorganisms and cultured cells/tissues is presented. An understanding of gravity and its effects on cells is crucial for space exploration as well as for terrestrial applications. The payload is designed to be compatible with the COMmercial Experiment Transported (COMET) launch vehicle, an orbiter middeck locker interface, and with Space Station Freedom. Uplink/downlink capabilities and sample return through controlled reentry are available for all carriers. Autonomous testing activities are preprogrammed with inflight reprogrammability. Sensors for monitoring temperature, pH, light, gravity levels, vibration, and radiation are provided for environmental regulation and experimental data collection. Additional experiment data acquisition includes optical density measurement, microscopy, video, and file photography. Onboard full data storage capabilities are provided. A fluid transfer mechanism is utilized for inoculation, sampling, and nutrient replenishment of experiment cultures. In addition to payload design, representative experiments were developed to ensure scientific objectives remained compatible with hardware capabilities. The project is defined to provide biological data pertinent to extended duration crewed space flight including crew health issues and development of a Controlled Ecological Life Support System (CELSS). In addition, opportunities are opened for investigations leading to commercial applications of space, such as pharmaceutical development, modeling of terrestrial diseases, and material processing.

Luttges, M. W.↗