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At least 1,027 records · Page 57

Historical and future trends in South Asian monsoon low pressure systems in a high-resolution model ensemble

Historical trends in monsoon low pressure systems (LPS), the dominant rain-bearing weather system of South Asia, have been difficult to assess due to changes in the observing network. Future projections have also remained uncertain because prior studies concluded that many coarse-resolution climate models do not accurately simulate LPS. Here, we examine changes in South Asian monsoon LPS simulated by an ensemble of global models, including some with high spatial resolution, that we show skillfully represent LPS. In the ensemble mean, the number of strong LPS (monsoon depressions) decreased over the last 65 years (1950–2014) by about 15% while no trend was detected for weaker LPS (monsoon lows). The reduction in depression counts then moderated, yielding no trend in the periods 1980–2050 or 2015–2050. The ensemble mean projects a shift in genesis from ocean to land and an increase in LPS precipitation of at least 7% K −1 , which together contribute to a projected increase in seasonal mean and extreme precipitation over central India.

54 ENVIRONMENTAL SCIENCES↗

Response of cumulus clouds to large-scale forcing and cumulus parameterization

Using the cumulus ensemble model (Soong and Ogura, 1980), statistical properties of cumulus clouds that occur in response to the imposed large scale forcing were investigated both in the tropical and midlatitude situtations. A strong drying process was found to occur in the boundary layer in association with deep convection in a midlatitude case. The Arakawa-Schubert (1974) cumulus parameterization scheme was tested semi-prognostically against both the model result and the observation in a tropical rain event that occurred in GATE. The Cloud heating and drying effects predicted by the Arakawa-Schubert scheme were found to agree well both with the observation and the model result. However, it was also found that the Arakawa-Schuber scheme underestimates both condensation and evaporation rates substantially. An inclusion of the downdraft effect, as formulated by Johnson (1976), appears to alleviate this deficiency. This downdraft effect may be important in predicting the behavior of the boundary accurately.

Ogura, Y.↗

Formations of Tethered Spacecraft as Stable Platforms for Far IR and Sub-mm Astronomy

In this paper we describe current research in tethered formations for interferometry, and a roadmap to demonstrating the required key technologies via on-ground and in-orbit testing. We propose an integrated kilometer-size tethered spacecraft formation flying concept which enables Far IR and Sub-mm astronomy observations from space. A rather general model is used to predict the dynamics, control, and estimation performance of formations of spacecraft connected by tethers in LEO and deep space. These models include the orbital and tethered formation dynamics, environmental models, and models of the formation estimator/controller/commander. Both centralized and decentralized control/sensing/estimation schemes are possible, and dynamic ranges of interest for sensing/control are described. Key component/subsystem technologies are described which need both ground-based and in-orbit demonstration prior to their utilization in precision space interferometry missions using tethered formations. Defining an orbiting formation as an ensemble of orbiting spacecraft performing a cooperative task, recent work has demonstrated the validity of the tethering the spacecraft to provide both the required formation rigidity and satisfy the formation reconfiguration needs such as interferometer baseline control. In our concept, several vehicles are connected and move along the tether, so that to reposition them the connecting tether links must vary in length. This feature enables variable and precise baseline control while the system spins around the boresight. The control architecture features an interferometer configuration composed of one central combiner spacecraft and two aligned collector spacecraft. The combiner spacecraft acts as the formation leader and is also where the centralized sensing and estimation functions reside. Some of the issues analyzed with the model are: dynamic modes of deformation of the distributed structure, architecture of the formation sensor, and sources of dynamical perturbation that need to be mitigated for precision operation in space. Examples from numerical simulation of an envisioned scenario in heliocentric orbit demonstrate the potential of the concept for space interferometry.

Quadrelli, Marco B.↗

Geomagnetic Secular Variation Forecast using the NASA GEMS Ensemble Kalman filter: A Candidate SV Model for IGRF‑13

We have produced a 5-year mean secular variation (SV ) of the geomagnetic field for the period 2020–2025. We use the NASA Geomagnetic Ensemble Modeling System (GEMS), which consists of the NASA Goddard geodynamo model and ensemble Kalman filter (EnKF) with 400 ensemble members. Geomagnetic field models are used as observations for the assimilation, including gufm1 (1590–1960), CM4 (1961–2000) and CM6 (2001–2019). The forecast involves a bias correction scheme that assumes that the model bias changes on timescales much longer than the forecast period, so that they can be removed by successive forecast series. The algorithm was validated on the time period 2010-2015 by comparing with CM6 before being applied to the 2020–2025 time period. This forecast has been sub-mitted as a candidate predictive model of IGRF-13 for the period 2020–2025.

Andrew Tangborn↗

Multilevel Monte Carlo Predictions of First Passage Times in Three-Dimensional Discrete Fracture Networks: A Graph-Based Approach

In this paper, we present a method combining multilevel Monte Carlo (MLMC) and a graph-based primary subnetwork identification algorithm to provide estimates of the mean and variance of the distribution of first passage times in fracture media at significantly lower computational cost than standard Monte Carlo (MC) methods. Simulations of solute transport are performed using a discrete fracture network (DFN), and instead of using various grid resolutions for levels in the MLMC, which is standard practice in MLMC, we identify a hierarchy of subnetworks in the DFN based on the shortest topological paths through the network using a graph-based method. While the mean of these ensembles is of critical importance, the variance is also essential in fractured media where uncertainty is an overarching theme, and understanding variability across an ensemble is a requirement for safety assessments. The method provides good estimates of the mean and variance at two orders of magnitude lower computational cost than MC.

54 ENVIRONMENTAL SCIENCES↗

Size-Dependent Photon Avalanching in Tm 3+ Doped LiYF 4 Nano, Micro, and Bulk Crystals

Photon avalanche (PA) is a highly nonlinear mode of upconversion that is characterized by 100–1000-fold increase in luminescence intensity upon minute increments of pumping power. The practical realization of numerous possible nano-bio-technology applications utilizing the PA phenomenon will require information on its susceptibility to the material volume and surface. In this report these parameters are investigated via experimental and theoretical PA. The two-color, highly nonlinear PA emission at 475 and 800 nm is clearly observed in bulk single crystal, individual microcrystals, and ensembles of colloidal core and core–shell nanoparticles of LiYF 4 host doped with either 3 or 8% of thulium ions. The properties of PA emission, such as PA nonlinearity, PA gain, PA intensity, and luminescence kinetics in these materials show dependence on crystal volume and surface quenching. Theoretical simulations provide understanding of key physical processes that influence PA performance. Moreover, photon avalanche single beam super-resolution imaging is realized for the first time in 3% Tm 3+ doped LiYF 4 core–shell nanoparticles. The obtained insights and predictions form a solid background for further development and applications of new optimized PA materials.

36 MATERIALS SCIENCE↗

Probabilistic Deep Learning Approach to Automate the Interpretation of Multi-phase Diffraction Spectra

Autonomous synthesis and characterization of inorganic materials requires the automatic and accurate analysis of X-ray diffraction spectra. For this task, we designed a probabilistic deep learning algorithm to identify complex multi-phase mixtures. At the core of this algorithm lies an ensemble convolutional neural network trained on simulated diffraction spectra, which are systematically augmented with physics-informed perturbations to account for artifacts that can arise during experimental sample preparation and synthesis. In this work, larger perturbations associated with off-stoichiometry are also captured by supplementing the training set with hypothetical solid solutions. Spectra containing mixtures of materials are analyzed with a newly developed branching algorithm that utilizes the probabilistic nature of the neural network to explore suspected mixtures and identify the set of phases that maximize confidence in the prediction. Our model is benchmarked on simulated and experimentally measured diffraction spectra, showing exceptional performance with accuracies exceeding those given by previously reported methods based on profile matching and deep learning. We envision that the algorithm presented here may be integrated in experimental workflows to facilitate the high-throughput and autonomous discovery of inorganic materials.

36 MATERIALS SCIENCE↗

Directing reaction pathways via in situ control of active site geometries in PdAu single-atom alloy catalysts

Abstract The atomic scale structure of the active sites in heterogeneous catalysts is central to their reactivity and selectivity. Therefore, understanding active site stability and evolution under different reaction conditions is key to the design of efficient and robust catalysts. Herein we describe theoretical calculations which predict that carbon monoxide can be used to stabilize different active site geometries in bimetallic alloys and then demonstrate experimentally that the same PdAu bimetallic catalyst can be transitioned between a single-atom alloy and a Pd cluster phase. Each state of the catalyst exhibits distinct selectivity for the dehydrogenation of ethanol reaction with the single-atom alloy phase exhibiting high selectivity to acetaldehyde and hydrogen versus a range of products from Pd clusters. First-principles based Monte Carlo calculations explain the origin of this active site ensemble size tuning effect, and this work serves as a demonstration of what should be a general phenomenon that enables in situ control over catalyst selectivity.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Investigating the impact of cloud-radiative feedbacks on tropical precipitation extremes

Abstract Although societally important, extreme precipitation is difficult to represent in climate models. This study shows one robust aspect of extreme precipitation across models: extreme precipitation over tropical oceans is strengthened through a positive feedback with cloud-radiative effects. This connection is shown for a multi-model ensemble with experiments that make clouds transparent to longwave radiation. In all cases, tropical extreme precipitation reduces without cloud-radiative effects. Qualitatively similar results are presented for one model using the cloud-locking method to remove cloud feedbacks. The reduced extreme precipitation without cloud-radiative feedbacks does not arise from changes in the mean climate. Rather, evidence is presented that cloud-radiative feedbacks enhance organization of convection and most extreme precipitation over tropical oceans occurs within organized systems. This result suggests that climate models must correctly predict cloud structure and properties, as well as capture the essence of organized convection in order to accurately represent extreme rainfall.

54 ENVIRONMENTAL SCIENCES↗

Data Science Meets Physical Organic Chemistry

At the heart of synthetic chemistry is the holy grail of predictable catalyst design. In particular, researchers involved in reaction development in asymmetric catalysis have pursued a variety of strategies toward this goal. This is driven by both the pragmatic need to achieve high selectivities and the inability to readily identify why a certain catalyst is effective for a given reaction. While empiricism and intuition have dominated the field of asymmetric catalysis since its inception, enantioselectivity offers a mechanistically rich platform to interrogate catalyst-structure response patterns that explain the performance of a particular catalyst or substrate. In the early stages of an asymmetric reaction development campaign, the overarching mechanism of the reaction, catalyst speciation, the turnover limiting step, and many other details are unknown or posited based on related reactions. Considering the unclear details leading to a successful reaction, initial enantioselectivity data are often used to intuitively guide the ultimate direction of optimization. However, if the conditions of the Curtin-Hammett principle are satisfied, then measured enantioselectivity can be directly connected to the ensemble of diastereomeric transition states (TSs) that lead to the enantiomeric products, and the associated free energy difference between competing TSs (ΔΔ G ‡ = - RT ln[( S )/( R )], where ( S ) and ( R ) represent the concentrations of the enantiomeric products). We, and others, speculated that this important piece of information can be leveraged to guide reaction optimization in a quantitative way. Although traditional linear free energy relationships (LFERs), such as Hammett plots, have been used to illuminate important mechanistic features, we sought to develop data science derived tools to expand the power of LFERs in order to describe complex reactions frequently encountered in modern asymmetric catalysis. Specifically, we investigated whether enantioselectivity data from a reaction can be quantitatively connected to the attributes of reaction components, such as catalyst and substrate structural features, to harness data for asymmetric catalyst design. In this context, we developed a workflow to relate computationally derived features of reaction components to enantioselectivity using data science tools. The mathematical representation of molecules can incorporate many aspects of a transformation, such as molecular features from substrate, product, catalyst, and proposed transition states. Statistical models relating these features to reaction outputs can be used for various tasks, such as performance prediction of untested molecules. Perhaps most importantly, statistical models can guide the generation of mechanistic hypotheses that are embedded within complex patterns of reaction responses. Overall, merging traditional physical organic experiments with statistical modeling techniques creates a feedback loop that enables both evaluation of multiple mechanistic hypotheses and future catalyst design. In this Account, we highlight the evolution and application of this approach in the context of a collaborative program based on chiral phosphoric acid catalysts (CPAs) in asymmetric catalysis.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Ensemble Simulations and Experimental Free Energy Distributions: Evaluation and Characterization of Isoxazole Amides as SMYD3 Inhibitors

Optimization of binding affinities for ligands to their target protein is a primary objective in rational drug discovery. Herein, we report on a collaborative study that evaluates various compounds designed to bind to the SET and MYND domain-containing protein 3 (SMYD3). SMYD3 is a histone methyltransferase and plays an important role in transcriptional regulation in cell proliferation, cell cycle, and human carcinogenesis. Experimental measurements using the scintillation proximity assay show that the distributions of binding free energies from a large number of independent measurements exhibit non-normal properties. We use ESMACS (enhanced sampling of molecular dynamics with approximation of continuum solvent) and TIES (thermodynamic integration with enhanced sampling) protocols to predict the binding free energies and to provide a detailed chemical insight into the nature of ligand-protein binding. Our results show that the 1-trajectory ESMACS protocol works well for the set of ligands studied here. Although one unexplained outlier exists, we obtain excellent statistical ranking across the set of compounds from the ESMACS protocol and good agreement between calculations and experiments for the relative binding free energies from the TIES protocol. ESMACS and TIES are again found to be powerful protocols for the accurate comparison of the binding free energies.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Weakened Orographic Influence on Cool-Season Precipitation in Simulations of Future Warming Over the Western US

High-resolution regional climate model (RCM) simulations of global warming consistently predict larger percentage increases in precipitation in the lee of midlatitude mountain ranges than on their windward slopes, indicating a weakening of the orographic rain shadow. This redistribution of precipitation could have profound consequences for water resources and ecosystems, but its underlying mechanisms are unknown. Here we show that rain-shadow weakening is just one manifestation of a more general decrease in the influence of orography on precipitation under global warming. We introduce a simple model of precipitation change based on this principle, and find that it agrees well with an ensemble of high-resolution simulations performed over the western United States. We argue that diminished orographic influence can be explained by the unique vertical structure of orographically forced ascent, which tends to maximize in the lower atmosphere where condensation is thermodynamically less sensitive to warming.

54 ENVIRONMENTAL SCIENCES↗

Evaluation of top-down and bottom-up global terrestrial respiration estimates and their mismatch with model simulations

Terrestrial respiration is one of the most poorly understood processes in the global carbon cycle, making respiration predictions uncertain. However, expanding observations and machine learning approaches have led to a proliferation of estimates. We compiled total ecosystem and heterotrophic respiration estimates derived from top-down atmospheric inversions and bottom-up upscaling of ecosystem observations and compared them with dynamic vegetation models (DGVM) simulations over the 1980-2020 period. Our analysis revealed a convergence in mean annual global total ecosystem respiration estimates between top-down 97.1 (± SD 6.8) PgC yr-1 and bottom-up 98.5 (+/-13.4) PgC yr-1, which were both significantly lower than the ensemble mean from DGVMs estimates 133.7 (±4.7) PgC yr-1. We also found similar temporal trends between top-down estimates with a mean of 0.075 (±0.05) PgC yr-2, and bottom-up estimates of 0.05 (±0.05) PgC yr-2, which were 5 to 7 times smaller than the ensemble mean trend of 0.34 PgC yr-2 simulated by DGVMs. Global heterotrophic respiration showed much less agreement, ranging from top-down estimates of 42.7 (±4.0) PgC yr-1 to bottom-up estimates of 51.5 (±4.0) PgC yr-1 and a significantly larger ensemble model mean estimate of 60.8 PgC yr-1 (±1.9). The temporal trends in observation-based bottom-up estimates of heterotrophic respiration of 0.03 PgC yr-2 were five times lower than the model ensemble mean 0.15 PgC yr-2. Large regional disagreements in heterotrophic respiration estimates and simulations were evident in tropical and boreal latitudes. Therefore, improved regional and heterotrophic respiration estimates are necessary to reduce uncertainties regarding the future vulnerability of soil carbon.

Ballantyne, Ashley↗

A joint role for forced and internally-driven variability in the decadal modulation of global warming

Despite the observed monotonic increase in greenhouse-gas concentrations, global mean temperature displays important decadal fluctuations typically attributed to both external forcing and internal variability. Here, we provide a robust quantification of the relative contributions of anthropogenic, natural, and internally-driven decadal variability of global mean sea surface temperature (GMSST) by using a unique dataset consisting of 30-member large initial-condition ensembles with five Earth System Models (ESM-LE). We present evidence that a large fraction (~29–53%) of the simulated decadal-scale variance in individual timeseries of GMSST over 1950–2010 is externally forced and largely linked to the representation of volcanic aerosols. Comparison with the future (2010–2070) period suggests that external forcing provides a source of additional decadal-scale variability in the historical period. Given the unpredictable nature of future volcanic aerosol forcing, it is suggested that a large portion of decadal GMSST variability might not be predictable.

54 ENVIRONMENTAL SCIENCES↗

Dependent scattering and fractal microstructure determine the transparency of aerogel monoliths

This study reveals how dependent scattering and microstructure significantly affect electromagnetic wave propagation through aerogel monoliths, contributing to their transparency. Light scattering by particle ensembles is considered “dependent” when the scattering properties rely not only on particle size and optical constants but also on their spatial distribution, typically occurring when the average interparticle distance is small in comparison with the wavelength of incident radiation. Addressing dependent scattering requires solving Maxwell’s equations for complex heterogeneous structures, which is computationally demanding and usually limited to sample thicknesses on the same scale as the wavelength. This study combines computer-generated ambigel microstructures of fractal aggregates of polydisperse nanoparticles and the radiative transfer with reciprocal transaction method to predict the transmittance of thick ambigel slabs. Transmittance measurements of ambiently dried aerogel monoliths (ambigels) with porosities from about 50% to 90% closely matched the predicted values for their digital twins. However, ignoring dependent scattering or particle aggregation led to inaccurate predictions. This study validated the computational framework, and its findings offer insights for designing photonic metamaterials and analyzing their interactions with electromagnetic waves.

Yalcin, Refet A. (ORCID:0000000339973494)↗

Early-time measure in eternal inflation

In a situation like eternal inflation, where our data is replicated at infinitely-many other space-time events, it is necessary to make a prior assumption about our location to extract predictions. The principle of mediocrity entails that we live at asymptotic late times, when the occupational probabilities of vacua has settled to a near-equilibrium distribution. In this paper we further develop the idea that we instead exist during the approach to equilibrium, much earlier than the exponentially-long mixing time. In this case we are most likely to reside in vacua that are easily accessed dynamically. Using first-passage statistics, we prove that vacua that maximize their space-time volume at early times have: 1. maximal ever-hitting probability; 2. minimal mean first-passage time; and 3. minimal decay rate. These requirements are succinctly captured by an early-time measure. The idea that we live at early times is a predictive guiding principle, with many phenomenological implications. First, our vacuum should lie deep in a funneled region, akin to folding energy landscapes of proteins. Second, optimal landscape regions are characterized by relatively short-lived vacua, with lifetime of order the de Sitter Page time. For our vacuum, this lifetime is ~ 10 130 years, which is consistent with the Standard Model estimate due to Higgs metastability. Third, the measure favors vacua with small, positive vacuum energy. This can address the cosmological constant problem, provided there are sufficiently many vacua in the entire ensemble of funnels. As a concrete example, we study the Bousso-Polchinski lattice of flux vacua, and find that the early-time measure favors lattices with the fewest number of flux dimensions. This favors compactifications with a large hierarchy between the lightest modulus and all other Kähler and complex structure moduli.

79 ASTRONOMY AND ASTROPHYSICS↗

TULIP: An RNA-seq-based Primary Tumor Type Prediction Tool Using Convolutional Neural Networks

Background: With cancer as one of the leading causes of death worldwide, accurate primary tumor type prediction is critical in identifying genetic factors that can inhibit or slow tumor progression. There have been efforts to categorize primary tumor types with gene expression data using machine learning, and more recently with deep learning, in the last several years. Methods In this paper, we developed four 1-dimensional (1D) Convolutional Neural Network (CNN) models to classify RNA-seq count data as one of 17 highly represented primary tumor types or 32 primary tumor types regardless of imbalanced representation. Additionally, we adapted the models to take as input either all Ensembl genes (60,483) or protein coding genes only (19,758). Unlike previous work, we avoided selection bias by not filtering genes based on expression values. RNA-seq count data expressed as FPKM-UQ of 9,025 and 10,940 samples from The Cancer Genome Atlas (TCGA) were downloaded from the Genomic Data Commons (GDC) corresponding to 17 and 32 primary tumor types respectively for training and validating the models. Results: All 4 1D-CNN models had an overall accuracy of 94.7% to 97.6% on the test dataset. Further evaluation indicates that the models with protein coding genes only as features performed with better accuracy compared to the models with all Ensembl genes for both 17 and 32 primary tumor types. For all models, the accuracy by primary tumor type was above 80% for most primary tumor types. Conclusions: We packaged all 4 models as a Python-based deep learning classification tool called TULIP (TUmor CLassIfication Predictor) for performing quality control on primary tumor samples and characterizing cancer samples of unknown tumor type. Further optimization of the models is needed to improve the accuracy of certain primary tumor types.

Jones, Sara↗

STOCHASTIC OPTIMAL POWER FLOW FOR REAL-TIME MANAGEMENT OF DISTRIBUTED RENEWABLE GENERATION AND DEMAND RESPONSE (Final Report)

To meet the grand challenge of a sustainable energy future, there has been a surge of interest in renewable energy. Today, the uncertainty associated with renewable resources is handled by using operating reserves. The high penetration of renewable resources, however, introduces difficult-to-control dynamics and challenges for power system operation. Decision support tools are necessary at the bulk system operational level to recognize and efficiently utilize renewable resources and distributed demand response products in concert with traditional grid resources. It is envisaged that responsive load can potentially have very significant cost advantages over either spinning or non-spinning ramping reserve. Critical decisions are made during hour(s)-ahead and real-time power system operation regarding the commitment and dispatch of generators to ensure power delivery is both reliable and economic. These decisions are typically made by a security constrained optimal flow, which determines future generator commitments, dispatches, and ensures adequate reserves are available in the event of a contingency (unexpected outage) or if future system conditions deviate from forecasts. However, security has been always based on a pre-specified subset of contingency constraints whose enforcement does not guarantee security under all possible future possibilities while also giving little or no weight to the likelihood of each contingent event or the severity of its consequences. Existing tools, which are based exclusively on deterministic optimization models, do not yield optimal operational decisions to address these new challenges, in terms of both reliability and cost-effectiveness. This project has focused on developing a stochastic optimal power flow (SOPF) framework, which integrates renewable resource uncertainty, load uncertainty, distributed storage (DS), demand response (DR) products, in a holistic manner to address the uncertainty associated with ever-increasing renewable resources, along with the inclusion of distributed demand response products in future power systems. A proof-of-concept problem was created using the Pennsylvania-Jersey-Maryland (PJM) power system network. Synthetic wind generation was added to the system to simulate 50% wind penetration. A 1-hour test of SOPF operation indicated more than 6% operational cost savings. The project continued by adding the Midwestern Independent System Operator (MISO) as a partner, with focus shifting from SOPF to Stochastic Look-Ahead Unit Commitment (SLAC). Unlike PJM, MISO is faced with significant renewable energy resources within its footprint and is challenged with substantial uncertainty in its operations. The SLAC distinguishes itself from existing tools that operators use. At best, today’s tools solve two to three cases independently, where one or two system parameters, such as forecasted load level (e.g., a low, base, and high forecast), are varied and the resulting scenarios are analyzed independently. The stochastic-based optimization of SLAC leverages statistical information from an ensemble of potential operational scenarios and their respective likelihood. The SLAC output can be translated into valuable information to the operator such as suggested commitments, optimal scheduling and dispatch of resources, reserve requirements at both locational and zonal resolutions, ramping availability and requirements, availability of demand response including operational guidance concerning the near-term and real-time coordination between distributed energy resources, and utilization of distributed storage resources. The developed SOPF/SLAC tool, a stand-alone tool compatible with existing EMSs, will provide system operators with unprecedented visibility, flexibility and predictability to these resources and operational guidance concerning the real-time coordination between DERs and DR/DS products. The game changing and practical impact of this disruptive technology will be dramatic and will usher in a new era in the electric power industry, wherein green energy concepts are fully embraced, and electric power costs are lowered throughout the nation.

42 ENGINEERING↗