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At least 1,027 records · Page 57

Semi-Automated Identification of Rocks in Images

Rock Identification Toolkit Suite is a computer program that assists users in identifying and characterizing rocks shown in images returned by the Mars Explorer Rover mission. Included in the program are components for automated finding of rocks, interactive adjustments of outlines of rocks, active contouring of rocks, and automated analysis of shapes in two dimensions. The program assists users in evaluating the surface properties of rocks and soil and reports basic properties of rocks. The program requires either the Mac OS X operating system running on a G4 (or more capable) processor or a Linux operating system running on a Pentium (or more capable) processor, plus at least 128MB of random-access memory.

Bornstein, Benjamin↗

Ovonic switching in tin selenide thin films

Amorphous tin selenide thin films which possess Ovonic switching properties were fabricated using vacuum deposition techniques. Results obtained indicate that memory type Ovonic switching does occur in these films the energy density required for switching from a high impedance to a low impedance state is dependent on the spacing between the electrodes of the device. The switching is also function of the magnitude of the applied voltage pulse. A completely automated computer controlled testing procedure was developed which allows precise control over the shape of the applied voltage switching pulse. A survey of previous experimental and theoretical work in the area of Ovonic switching is also presented.

Baxter, C. R.↗

Roofline Analysis in the Intel® Advisor to Deliver Optimized Performance for applications on Intel® Xeon Phi™ Processor

In this session we show, in two case studies, how the roofline feature of Intel Advisor has been utilized to optimize the performance of kernels of the XGC1 and PICSAR codes in preparation for Intel Knights Landing architecture. The impact of the implemented optimizations and the benefits of using the automatic roofline feature of Intel Advisor to study performance of large applications will be presented. This demonstrates an effective optimization strategy that has enabled these science applications to achieve up to 4.6 times speed-up and prepare for future exascale architectures. # Goal/Relevance of Session The roofline model [1,2] is a powerful tool for analyzing the performance of applications with respect to the theoretical peak achievable on a given computer architecture. It allows one to graphically represent the performance of an application in terms of operational intensity, i.e. the ratio of flops performed and bytes moved from memory in order to guide optimization efforts. Given the scale and complexity of modern science applications, it can often be a tedious task for the user to perform the analysis on the level of functions or loops to identify where performance gains can be made. With new Intel tools, it is now possible to automate this task, as well as base the estimates of peak performance on measurements rather than vendor specifications. The goal of this session is to demonstrate how the roofline feature of Intel Advisor can be used to balance memory vs. computation related optimization efforts and effectively identify performance bottlenecks. A series of typical optimization techniques: cache blocking, structure refactoring, data alignment, and vectorization illustrated by the kernel cases will be addressed. # Description of the codes ## XGC1 The XGC1 code [3] is a magnetic fusion Particle-In-Cell code that uses an unstructured mesh for its Poisson solver that allows it to accurately resolve the edge plasma of a magnetic fusion device. After recent optimizations to its collision kernel [4], most of the computing time is spent in the electron push (pushe) kernel, where these optimization efforts have been focused. The kernel code scaled well with MPI+OpenMP but had almost no automatic compiler vectorization, in part due to indirect memory addresses and in part due to low trip counts of low-level loops that would be candidates for vectorization. Particle blocking and sorting have been implemented to increase trip counts of low-level loops and improve memory locality, and OpenMP directives have been added to vectorize compute-intensive loops that were identified by Advisor. The optimizations have improved the performance of the pushe kernel 2x on Haswell processors and 1.7x on KNL. The KNL node-for-node performance has been brought to within 30% of a NERSC Cori phase I Haswell node and we expect to bridge this gap by reducing the memory footprint of compute intensive routines to improve cache reuse. ## PICSAR is a Fortran/Python high-performance Particle-In-Cell library targeting at MIC architectures first designed to be coupled with the PIC code WARP for the simulation of laser-matter interaction and particle accelerators. PICSAR also contains a FORTRAN stand-alone kernel for performance studies and benchmarks. A MPI domain decomposition is used between NUMA domains and a tile decomposition (cache-blocking) handled by OpenMP has been added for shared-memory parallelism and better cache management. The so-called current deposition and field gathering steps that compose the PIC time loop constitute major hotspots that have been rewritten to enable more efficient vectorization. Particle communications between tiles and MPI domain has been merged and parallelized. All considered, these improvements provide speedups of 3.1 for order 1 and 4.6 for order 3 interpolation shape factors on KNL configured in SNC4 quadrant flat mode. Performance is similar between a node of cori phase 1 and KNL at order 1 and better on KNL by a factor 1.6 at order 3 with the considered test case (homogeneous thermal plasma).

97 MATHEMATICS AND COMPUTING↗

The tubulin structure, a quarter of a century later

This retrospective on the 25th anniversary of the publication of the first structure of tubulin is shaped by my own personal experiences rather than being a strict and complete historical account of the event. It is a reflection on how working in science felt many years ago, on the struggles and the joys of reaching for the high-hanging fruit, and, ultimately, on how relevant or not our personal scientific contributions are to the broader scientific community. Writing it brought back memories of my unique and sadly lost postdoctoral advisor Ken Downing, who dreamt of this structure and brought it to fruition against all odds.

59 BASIC BIOLOGICAL SCIENCES↗

Penetration Through Slots in Overmoded Cavities

A resonant cavity undergoes three distinct behaviors with increasing frequency: 1) fundamental modes, localized in frequency with well defined modal distribution; 2) undermoded region, where modes are still separated, but are sufficiently perturbed by small imperfections that their spectral positions (and distributions) are statistical in nature; and 3) overmoded region, where modes overlap, field distributions follow stochastic distributions, and the slot acts as if in free space. Understanding the penetration through slots in the overmoded region is of great interest, and is the focus of this article. Since full-wave solvers may not be able to provide a timely answer for very high frequencies due to a lack of memory and/or computation resources, we develop bounding methods to estimate worst-case average and maximum fields within the cavity. Finally, after discussing the bounding formulation, we compare its results to full-wave simulations at the first, second, and third resonance supported by the slot in the case of a cylindrical cavity. Note that the bounding formulation indicates that results are nearly independent of cavity shape: only the cavity volume, frequency, and cavity quality factor affect the overmoded region, making this formulation a powerful tool to assess electromagnetic interference and electromagnetic compatibility effects within cavities.

overmoded cavity↗

Imaging the magnetic nanowire cross section and magnetic ordering within a suspended 3D artificial spin-ice

Artificial spin-ice systems are patterned arrays of magnetic nanoislands arranged into frustrated geometries and provide insight into the physics of ordering and emergence. The majority of these systems have been realized in two-dimensions, mainly due to the ease of fabrication, but with recent developments in advanced nanolithography, three-dimensional artificial spin ice (ASI) structures have become possible, providing a new paradigm in their study. Such artificially engineered 3D systems provide new opportunities in realizing tunable ground states, new domain wall topologies, monopole propagation, and advanced device concepts, such as magnetic racetrack memory. Direct imaging of 3DASI structures with magnetic force microscopy has thus far been key to probing the physics of these systems but is limited in both the depth of measurement and resolution, ultimately restricting measurement to the uppermost layers of the system. In this work, a method is developed to fabricate 3DASI lattices over an aperture using two-photon lithography, thermal evaporation, and oxygen plasma exposure, allowing the probe of element-specific structural and magnetic information using soft x-ray microscopy with x-ray magnetic circular dichroism (XMCD) as magnetic contrast. The suspended polymer–permalloy lattices are found to be stable under repeated soft x-ray exposure. Analysis of the x-ray absorption signal allows the complex cross section of the magnetic nanowires to be reconstructed and demonstrates a crescent-shaped geometry. Measurement of the XMCD images after the application of an in-plane field suggests a decrease in magnetic moment on the lattice surface due to oxidation, while a measurable signal is retained on sub-lattices below the surface.

36 MATERIALS SCIENCE↗

A dynamic solvent chamber propagation estimation framework using RNN for warm solvent injection in heterogeneous reservoirs

Warm solvent injection (WSI), injecting low-temperature solvent into formations to reduce the viscosity of heavy oil, is a clean technology for heavy oil production through reducing greenhouse gas emissions and water usage. The success of WSI operation depends on the uniform development and propagation of solvent chambers in reservoirs. However, reservoir heterogeneity stemming from shale barriers plays a detrimental role in the conformance of solvent chamber development and oil production rate. In this work, we developed a novel recurrent neural network (RNN)-based framework with the capability of efficiently tracking and estimating the solvent chamber positions in heterogeneous reservoirs based on only production time-series data. The developed estimation model utilizes the “sequence-to-sequence" mapping methodology to correlate observed production time-series sequence and solvent chamber edge sequence via a long short-term memory (LSTM) algorithm. The trained RNN models exhibit high accuracy, evidenced by the predicted dynamic solvent chamber locations match the corresponding true locations from numerical simulation, with a high coefficient of determination (R 2 ) and a low mean squared error. Specifically, the achieved R 2 values exceed 0.98 on both the training and testing data. The developed RNN-based workflow was tested via several cases from both regularly- and irregularly-shaped shale barriers, and the results were promising. The predicted solvent chambers showed strong agreement with those obtained from numerical simulations. The major benefits of this workflow include reducing computational time and saving overall monitoring and tracking costs for conventional techniques. In conclusion, the present work would provide a good demonstration of the capability of practical integration of machine learning methods in solving engineering problems.

58 GEOSCIENCES↗

Color visualization for fluid flow prediction

High-resolution raster scan color graphics allow variables to be presented as a continuum, in a color-coded picture that is referenced to a geometry such as a flow field grid or a boundary surface. Software is used to map a scalar variable such as pressure or temperature, defined on a two-dimensional slice of a flow field. The geometric shape is preserved in the resulting picture, and the relative magnitude of the variable is color-coded onto the geometric shape. The primary numerical process for color coding is an efficient search along a raster scan line to locate the quadrilteral block in the grid that bounds each pixel on the line. Tension spline interpolation is performed relative to the grid for specific values of the scalar variable, which is then color coded. When all pixels for the field of view are color-defined, a picture is played back from a memory device onto a television screen.

Smith, R. E.↗

Stilbene cell development to improve radioxenon detection

A prototype stilbene beta cell has been designed, manufactured, tested, and compared to a plastic scintillator beta cell used for nuclear explosion monitoring of radioxenon. Measurements of the four isotopes of interest show similar responses for both the plastic scintillator and stilbene cell. However, we show that the stilbene cell exhibits minimal memory effect (0.043%), a capability that is of interest in nuclear explosion monitoring because it improves detection sensitivity, allowing for decreased time between measurements. The resolution of the stilbene cell is improved slightly (2.2 keV at 129 keV) when compared to the plastic scintillator cell. The efficiency of the stilbene cell is lower than that of the plastic by an average 15%. These results suggest that an improvement in light collection are needed. Pulse shape discrimination analysis decreases the minimum detectable concentration by 1%. The use of this geometry allows for a simple replacement of the plastic cells currently used in the field versus a complete overhaul of the existing radioxenon monitoring stations.

Sivels, Ciara B.↗

Complementary first and second derivative methods for ansatz optimization in variational Monte Carlo

We present a comparison between a number of recently introduced low-memory wave function optimization methods for variational Monte Carlo in which we find that first and second derivative methods possess strongly complementary relative advantages. While we find that low-memory variants of the linear method are vastly more efficient at bringing wave functions with disparate types of nonlinear parameters to the vicinity of the energy minimum, accelerated descent approaches are then able to locate the precise minimum with less bias and lower statistical uncertainty. By constructing a simple hybrid approach that combines these methodologies, we show that all of these advantages can be had at once when simultaneously optimizing large determinant expansions, molecular orbital shapes, traditional Jastrow correlation factors, and more nonlinear many-electron Jastrow factors.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Challenges of Monte Carlo Transport

These are slides from a presentation for Parallel Summer School at Los Alamos National Laboratory. Solving discretized partial differential equations (PDEs) of interest can require a large number of computations. We can identify concurrency to allow parallel solution of discrete PDEs. Simulated particles histories can be used to solve the Boltzmann transport equation. Particle histories are independent in neutral particle transport, making them amenable to parallel computation. Physical parameters and method type determine the data dependencies of particle histories. Data requirements shape parallel algorithms for Monte Carlo. Then, Parallel Computational Physics and Parallel Monte Carlo are discussed and, finally, the results are given. The mesh passing method greatly simplifies the IMC implementation and allows simple load-balancing. Using MPI windows and passive, one-sided RMA further simplifies the implementation by removing target synchronization. The author is very interested in implementations of PGAS that may allow further optimization for one-sided, read-only memory access (e.g. Open SHMEM). The MPICH_RMA_OVER_DMAPP option and library is required to make one-sided messaging scale on Trinitite - Moonlight scales poorly. Interconnect specific libraries or functions are likely necessary to ensure performance. BRANSON has been used to directly compare the current standard method to a proposed method on idealized problems. The mesh passing algorithm performs well on problems that are designed to show the scalability of the particle passing method. BRANSON can now run load-imbalanced, dynamic problems. Potential avenues of improvement in the mesh passing algorithm will be implemented and explored. A suite of test problems that stress DD methods will elucidate a possible path forward for production codes.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

The Martian dust storm of Sol 1742

After nearly five earth years on Mars, the Mutch Memorial Station (Viking Lander 1) finally witnessed a local dust storm that eroded trenches, conical piles, and other disturbed surfaces in the sample field and near the Lander. The event, called the Dust Storm of Sol 1742, occurred late in the third winter of Lander observations between Sols 1728 and 1757. Analyses of tiny new wind tails and movement of materials indicate that the eroding winds were variable but northeasterly than those that had previously shaped the surface. Pebbly residues and movement of 4-5 mm clods suggest drag velocities or friction speeds of the winds were about 2.2-4.0 m/s. Wind speeds at the height of the meteorology boom (1.6 m) were probably about 40-50 m/s. Much of the observed erosion could have occurred in a few to several tens of seconds, but somewhat longer times are suggested by analogy with the erosion of terrestrial soils. Most of the erosion occurred where preexisting equilibrium conditions of surface configurations and surface material properties had been altered by the Lander during landing and during surface-sampler activities, but thin layers of bright fine-grained dust were also removed and redistributed. Surfaces where preexisting equilibrium conditions were unaltered appeared to be uneroded.

Moore, H. J.↗

User's manual for the Gaussian windows program

'Gaussian Windows' is a method for exploring a set of multivariate data, in order to estimate the shape of the underlying density function. The method can be used to find and describe structural features in the data. The method is described in two earlier papers. I assume that the reader has access to both of these papers, so I will not repeat material from them. The program described herein is written in BASIC and it runs on an IBM PC or PS/2 with the DOS 3.3 operating system. Although the program is slow and has limited memory space, it is adequate for experimenting with the method. Since it is written in BASIC, it is relatively easy to modify. The program and some related files are available on a 3-inch diskette. A listing of the program is also available. This user's manual explains the use of the program. First, it gives a brief tutorial, illustrating some of the program's features with a set of artificial data. Then, it describes the results displayed after the program does a Gaussian window, and it explains each of the items on the various menus.

Jaeckel, Louis A.↗

The principle of minimal power

This article is devoted to the memory of Yuri P Raizer, who passed away in 2021. He left a noticeable trace in gas discharge physics. The principle of minimal power (the state that requires minimal power is most probable) is thoroughly used in his books. Although the fundamental laws of physics do not imply this ad hoc principle, a detailed analysis of underlying phenomena can often reveal why nature prefers this path. Raizer illustrated this principle for plasma stratification, formation of electrode spots, discharge constriction, the shape of an arc channel, etc. We argue that the nonlinearity of equations describing gas discharges can often justify the realization of a plasma state maintained at minimal electric power. This nonlinearity appears because small groups of energetic electrons often control the ionization processes. The number of these electrons depends strongly on the ratio of the electric field to gas density, E/N. Under certain conditions, the ionization rate can also depend nonlinearly on electron density due to stepwise ionization and Coulomb collisions. Here, we use the principle of minimal power to illustrate some of Raizer's contributions to gas discharge physics from a single point of view. We demonstrate that nonlinearity of ionization processes in gas discharges can substantiate this principle for plasma stratification. However, striations of s, p, and r types in neon could exist with minimal or no ionization enhancement. This reminds us of Raizer's warning that applying the minimal power principle could lead to erroneous predictions, and a proper theory is required in each case to justify its use. 'The phenomenon of striations satisfies the principle of minimal power' – Yuri Raizer

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Autonomous nondestructive evaluation of resistance spot welded joints

The application of non-destructive evaluation approaches has attracted strong interests in modern automotive industries. Here, we present an autonomous deep-computing framework to analyze raw videos from infrared systems and to predict weld nugget shape and size with unprecedented accuracy and speed. In a comprehensive training and testing experiment with 90 videos (seven sets of welding material stack-ups), a new method was developed to assemble sufficient datasets for neural network training. Our framework successfully predicts all the nugget shapes with F1 scores that range from 0.84 to 0.92. The total training time on Nvidia DGX station takes less than 10 min for each set of welding material stack-up. The real inference time of an individual dataset (with 30 video frames) takes about 0.005 s. The procedure and methods developed in the study can be applied to other image-based weld property prediction, as well as other manufacturing processes. Furthermore, our well-trained neural networks take limited memory resources (2.3 MB) and are suitable for embedded microprocessors for in-situ welding quality control as edge computing within an intelligent welding framework.

42 ENGINEERING↗

Analysis of Multi-Scale Radiometric Data Collected during the Cold Land Processes Experiment-1 (CLPX-1)

Brightness temperature maps at 18.7 and 37 GHz collected at the Fraser and North Park Meso-Scale Areas during the Cold Land Processes Experiment by the NOAA Polarimetric Scanning Radiometer (PSWA) airborne sensor are analyzed. The Fraser site is mostly covered by forest with a typical snowpack depth of 1 m while North Park has no forest cover and is characterized by patches of shallow snow. We examine histograms of the brightness temperatures at 500 m resolution for both the Fraser and North Park areas. The histograms can be modelled by a log-normal distribution in the case of the Fraser MSA and by a bi-modal distribution in the case of the North Park MSA. The histograms of the brightness temperatures at coarser resolutions are also plotted to study the effects of sensor resolution on the shape of the distribution, on the values of the average brightness temperatures and standard deviations. Finally, the values of brightness temperatures obtained by re-sampling (aggregating) the data at 25 km resolution are compared with the values of the brightness temperatures collected by the Advanced Microwave Scanning Radiometer (AMSR-E) and Special Sensor Microwave/Imager (SSMII) satellite radiometers. The results show that in both areas for sensor footprint larger than 5000 m, the brightness temperatures show a flat distribution and the memory of the initial distribution is lost. The values of the brightness temperatures measured by the satellite radiometers are in good agreement with the values obtained averaging the airborne data, even if some discrepancies occur.

Tedesco, M.↗

Measuring the Energy Consumption and Efficiency of Deep Neural Networks: An Empirical Analysis and Design Recommendations

Addressing the "Red-AI" trend of rising energy consumption by large-scale neural networks, this study investigates the measured energy consumption of training various fully connected neural network architectures. We introduce the BUTTER-E dataset, an augmentation to the BUTTER Empirical Deep Learning dataset, containing energy consumption and performance data from 41,129 individual experimental runs spanning 30,582 distinct configurations: 13 datasets, 20 sizes (trainable parameters), 8 "shapes", and 14 depths on both CPUs and GPUs using node-level watt-meters. This dataset reveals the complex relationship between dataset size, network structure, and energy use. Our analysis uncovers a surprising, hardware-mediated non-linear relationship between energy efficiency and network design, challenging the assumption that reducing the number of parameters or FLOPs is the best way to achieve greater energy efficiency. We propose a straightforward and effective energy model that accounts for network size, computing, and memory hierarchy. Highlighting the need for cache-considerate algorithm development, we suggest a codesign approach to energy efficient network, algorithm, and hardware design. This work contributes to the fields of sustainable computing and Green AI, offering practical guidance for creating more energy-efficient neural networks and promoting sustainable AI.

97 MATHEMATICS AND COMPUTING↗

Influence of a Nitrogen Admixture on the Anomalous Memory Effect in the Breakdown of Low-Pressure Argon in a Long Discharge Tube

The memory effect (the dependence of the dynamic breakdown voltage U{sub b} on the time interval τ between voltage pulses) in pulse-periodic discharges in pure argon and the Ar + 1%N{sub 2} mixture was studied experimentally. The discharge was ignited in a 2.8-cm-diameter tube with an interelectrode distance of 75 cm. The measurements were performed at gas pressures of P = 1, 2, and 5 Torr and discharge currents in a steady stage of the discharge of I = 20 and 56 mA. Breakdown was produced by applying positive-polarity voltage pulses, the time interval between pulses being in the range of τ = 0.5–40 ms. In this range of τ values, a local maximum (the anomalous memory effect) was observed in the dependence U{sub b}(τ). It is shown that addition of nitrogen to argon substantially narrows the range of τ values at which this effect takes place. To analyze the measurement results, the plasma parameters in a steady-state discharge (in both pure argon and the Ar + 1%N{sub 2} mixture) and its afterglow were calculated for the given experimental conditions. Analysis of the experimental data shows that the influence of the nitrogen admixture on the shape of the dependence U{sub b}(τ) is, to a large extent, caused by the change in the decay rate of the argon afterglow plasma in the presence of a nitrogen admixture.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗