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At least 1,009 records · Page 56

Development of a Systematic and Extensible Force Field for Peptoids (STEPs)

Peptoids (N-substituted glycines) are a class of biomimetic polymers that have attracted significant attention due to their accessible synthesis and enzymatic and thermal stability relative to their naturally occurring counterparts (polypeptides). While these polymers provide the promise of more robust functional materials via hierarchical approaches, they present a new challenge for computational structure prediction for material design. The reliability of calculations hinges on the accuracy of interactions represented in the force field used to model peptoids. For proteins, structure prediction based on sequence and de novo design has made dramatic progress in recent years; however, these models are not readily transferable for peptoids. Current efforts to develop and implement peptoid-specific force fields are spread out, leading to replicated efforts and a fragmented collection of parameterized sidechains. Here, we developed a peptoid-specific force field containing 70 different side chains, using GAFF2 as starting point. The new model is validated based on the generation of Ramachandran-like plots from DFT optimization compared against force field reproduced potential energy and free energy surfaces as well as the reproduction of equilibrium cis/trans values for some residues experimentally known to form helical structures. In conclusion, equilibrium cis/trans distributions (Kct) are estimated for all parameterized residues to identify which residues have an intrinsic propensity for cis or trans states in the monomeric state.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Effect of K + Force Fields on Ionic Conductivity and Charge Dynamics of KOH in Ethylene Glycol

Predicting ionic conductivity is crucial for developing efficient electrolytes for energy storage and conversion and other electrochemical applications. An accurate estimate of ionic conductivity requires understanding complex ion–ion and ion–solvent interactions governing the charge transport at the molecular level. Molecular simulations can provide key insights into the spatial and temporal behavior of electrolyte constituents. However, such insights depend on the ability of force fields to describe the underlying phenomena. In this work, molecular dynamics simulations were leveraged to delineate the impact of force field parameters on ionic conductivity predictions of potassium hydroxide (KOH) in ethylene glycol (EG). Four different force fields were used to represent the K + ion. Diffusion-based Nernst–Einstein and correlation-based Einstein approaches were implemented to estimate the ionic conductivity, and the predicted values were compared with experimental measurements. The physical aspects, including ion-aggregation, charge distribution, cluster correlation, and cluster dynamics, were also examined. A force field was identified that provides reasonably accurate Einstein conductivity values and a physically coherent representation of the electrolyte at the molecular level.

25 ENERGY STORAGE↗

STEPs-SOL, a Peptoid Force Field Parameterization to Include Solvent Effects

As peptoids (N-substituted glycines) continue to gain popularity as a class of biomimetic polymers, the importance and demand for accurate force fields in molecular simulations also grow. Building on the vacuum-optimized Systematic and Extensible Force Field for Peptoids (STEPs) force field, here we present STEPs-SOL, a novel peptoid force field parametrization that effectively incorporates solvent effects to enhance the accuracy of peptoid simulations. The development of STEPs-SOL is based on the need for precise electrostatic modeling achieved through solvent-specific partial charge optimization. Here, our systematic approach significantly improves agreement with experimental measurements, reducing the mean absolute error in cis/trans ratio predictions (ΔG c/t ) by an average of 38% across multiple peptoid residues and solvent environments. This improved parametrization addresses computational challenges associated with nonbonded energies while maintaining a workflow that relies on high-level quantum mechanical data rather than depending solely on limited experimental equilibrium properties. By evaluating the effects of conformational bias in restrained electrostatic potential (RESP) charge generation and examining their impact on peptoid conformations in various solvents, we enhance our understanding of peptoid structural dynamics while providing a more accurate modeling framework.

force field↗

Comparing Machine Learning and Physics-Based Nanoparticle Geometry Determinations Using Far-Field Spectral Properties

Anisotropic metal nanostructures exhibit polarization-dependent light scattering, a property which has been widely studied and exploited to determine orientations of subwavelength structures using far-field microscopy. Here we explore the use of variational autoencoders (VAEs) to determine the geometries of gold nanorods (NRs) such as in-plane orientation and aspect ratio under linearly polarized dark-field illumination in an optical microscope. We enforce a shared latent space to connect two VAEs trained separately with polarized dark-field scattering spectra and electron microscopy images and achieve image prediction (shape, orientation, and size) of Au NRs using only polarized dark-field scattering spectra. We determine the geometrical parameters of orientational angle and aspect ratio quantitatively via both our dual-VAE and physics-based analysis on the input scattering spectra. We show that orientational angle prediction by dual-VAE performs well with only a small (~300 particle) training set, yielding a mean absolute error (MAE) of 14.4° and a concordance correlation coefficient (CCC) of 0.95. This performance is only marginally worse than the physics-based cos(2?) fitting approach between the scattering intensity and the polarizing angle, which achieves MAE of 8.78° and CCC of 0.99. Aspect ratio determination is also comparable for the dual-VAE and physics-based fitting comparison (MAE of 0.21 vs. 0.23 and CCC of 0.53 vs. 0.68). Here, this dual encoder-decoder architecture effectively exploits the structure-property relationships of plasmonic nanostructures to construct a cross-modal machine learning (ML) approach, providing a pathway to employ ML approaches to address other structure-property relationships in materials science.

Dark-field scattering↗

Elucidating Electric Field-Induced Rate Promotion of Brønsted Acid-Catalyzed Alcohol Dehydration

Applied potentials have been demonstrated as a powerful tool to promote heterogeneous Brønsted acid catalysis by orders of magnitude, leveraging interfacial electric fields to stabilize protonated intermediates. However, the use of flat two-dimensional electrodes with inherently low active site densities limits the application of conventional thermochemical characterization techniques that can probe the nature of catalytic active sites. Here, we use kinetic analyses with an electrostatics-based model to elucidate the intricacies of potential-induced rate promotion, employing liquid-phase dehydration of 1-methylcyclopentanol catalyzed by carboxylic acid groups on carbon nanotubes as a probe system. By using a basket electrode to directly polarize catalyst powder, we demonstrate that thermocatalytic reaction rates can be promoted by 100,000-fold, exhibiting a log–linear dependence on applied potential with rate-potential scalings as high as 125 ± 4 mV per 10-fold rate increase. In agreement with model predictions, we show that lower ionic strengths attenuate potential sensitivity, resulting from a weakening of the interfacial electric field that interacts with the acidic proton. Furthermore, we experimentally confirm the model-predicted “isokinetic potential” (at ∼0.6 V vs Ag/AgCl)─the potential at which all rate scaling lines at various ionic strengths intersect, making the rate independent of ionic strength. Base titrations reveal that only ∼8% of the carboxylic acid sites are catalytically active, yet these same active sites are operational at the highest and lowest potentials. Collectively, our results provide a key methodology for modeling catalytic effects of electric fields, quantifying active sites under applied potential, and demonstrating fundamental principles of electric field-induced rate promotion.

Catalysts↗

Unusual high-field metal in a Kondo insulator

Strong electronic interactions in condensed-matter systems often lead to unusual quantum phases. One such phase occurs in the Kondo insulator YbB12, the insulating state of which exhibits phenomena that are characteristic of metals, such as magnetic quantum oscillations, a gapless fermionic contribution to heat capacity and itinerant-fermion thermal transport. To understand these phenomena, it is informative to study their evolution as the energy gap of the Kondo insulator state is closed by a large magnetic field. Here we show that clear quantum oscillations are observed in the resulting high-field metallic state in YbB12; this is despite it possessing relatively high resistivity, large effective masses and huge Kadowaki–Woods ratio, a combination that normally precludes quantum oscillations. Both quantum oscillation frequency and cyclotron mass display a strong field dependence. By tracking the Fermi surface area, we conclude that the same quasiparticle band gives rise to quantum oscillations in both insulating and metallic states. These data are understood most simply by using a two-fluid picture in which neutral quasiparticles—contributing little or nothing to charge transport—coexist with charged fermions. Overall, our observations of the complex field-dependent behaviour of the fermion ensemble inhabiting YbB 12 provide strong constraints for existing theoretical models.

36 MATERIALS SCIENCE↗

Direct observation of a magnetic-field-induced Wigner crystal

Wigner predicted that when the Coulomb interactions between electrons become much stronger than their kinetic energy, electrons crystallize into a closely packed lattice. A variety of two-dimensional systems have shown evidence for Wigner crystals (WCs). However, a spontaneously formed classical or quantum WC has never been directly visualized. Neither the identification of the WC symmetry nor direct investigation of its melting has been accomplished. Here we use high-resolution scanning tunnelling microscopy measurements to directly image a magnetic-field-induced electron WC in Bernal-stacked bilayer graphene and examine its structural properties as a function of electron density, magnetic field and temperature. At high fields and the lowest temperature, we observe a triangular lattice electron WC in the lowest Landau level. The WC possesses the expected lattice constant and is robust between filling factor ν ≈ 0.13 and ν ≈ 0.38 except near fillings where it competes with fractional quantum Hall states. Increasing the density or temperature results in the melting of the WC into a liquid phase that is isotropic but has a modulated structure characterized by the Bragg wavevector of the WC. At low magnetic fields, the WC unexpectedly transitions into an anisotropic stripe phase, which has been commonly anticipated to form in higher Landau levels. Furthermore, analysis of individual lattice sites shows signatures that may be related to the quantum zero-point motion of electrons in the WC lattice.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Study of laser produced plasma in a longitudinal magnetic field

In this work, laser produced plasma embedded in a longitudinal magnetic field was studied using a 1 MA pulsed power generator coupled with a 50 TW laser. Half turn coil loads with an internal diameter of 2.5–3.5 mm generate a 50–70 T axial magnetic field near the load. A subpicosecond laser pulse with an intensity of 10 18 –10 19 W/cm 2 irradiates a thin Si foil target in the magnetic field of the coil load. A laser produced plasma plume collimates within the longitudinal field to a narrow jet 0.2–0.3 mm in diameter with a length of 3–4 mm and an electron plasma density of (0.2–1) × 10 20 cm ₋3 on the jet axis. The jet propagates with a velocity of 160–200 km/s in general agreement with magnetohydrodynamic simulations. X-ray spectral measurements demonstrate an increase in the plasma electron density resulting from the magnetic confinement of the jet.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Net energy gain in direct laser acceleration due to enhanced dephasing induced by an applied magnetic field

Even in the situation where an electron interacts with a single plane wave, the well-known dynamical adiabaticity can be broken when an applied magnetic field is present, which will act to increase the dephasing rate of the electron during the interaction. Here we demonstrate this for the case where there is a uniform static magnetic field which is oriented either parallel or perpendicular to the electric field of the incident plane wave, and perpendicular to the direction of its propagation. The described energy gain phenomenon has direct relevance to laser-plasma interactions that involve external magnetic fields generated by laser-driven capacitor coils.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Magnetic field impact on the laser heating in MagLIF

Prior to implosion in Magnetized Liner Inertial Fusion (MagLIF), the fuel is heated to temperatures on the order of several hundred eV with a multi-kJ, multi-ns laser pulse. In this paper, we present two laser heated plasma experiments, relevant to the MagLIF preheat stage, performed at Z with beryllium liners filled with deuterium and a trace amount of argon. In one experiment, there is no magnetic field and, in the other, the liner and fuel are magnetized with an 8.5 T axial magnetic field. The recorded time integrated, spatially resolved spectra of the Ar K-shell emission are sensitive to electron temperature T e . Individual analysis of the spatially resolved spectra produces electron temperature distributions T e (z) that are resolved along the axis of laser propagation. In the experiment with magnetic field, the plasma reaches higher temperatures and the heated region extends deeper within the liner than in the unmagnetized case. Radiation magnetohydrodynamics simulations of the experiments are presented and post-processed. A comparison of the results from experimental and simulated data reveals that the simulations underpredict T e in both cases but the differences are larger in the case with magnetic field.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Magnetic field effects on laser energy deposition and filamentation in magneto-inertial fusion relevant plasmas

We report on experimental measurements of how an externally imposed magnetic field affects plasma heating by kJ-class, nanosecond laser pulses. The experiments reported here took place in gas cells analogous to magnetized liner inertial fusion targets. We observed significant changes in laser propagation and energy deposition scale lengths when a 12T external magnetic field was imposed in the gas cell. We find evidence that the axial magnetic field reduces radial electron thermal transport, narrows the width of the heated plasma, and increases the axial plasma length. Reduced thermal conductivity increases radial thermal gradients. This enhances radial hydrodynamic expansion and subsequent thermal self-focusing. Our experiments and supporting 3D simulations in helium demonstrate that magnetization leads to higher thermal gradients, higher peak temperatures, more rapid blast wave development, and beam focusing with an applied field of 12T.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

On the study of hydrodynamic instabilities in the presence of background magnetic fields in high-energy-density plasmas

Blast-wave-driven hydrodynamic instabilities are studied in the presence of a background B-field through experiments and simulations in the high-energy-density (HED) physics regime. In experiments conducted at the Laboratoire pour l’utilisation des lasers intenses (LULI), a laser-driven shock-tube platform was used to generate a hydrodynamically unstable interface with a prescribed sinusoidal surface perturbation, and short-pulse x-ray radiography was used to characterize the instability growth with and without a 10-T B-field. The LULI experiments were modeled in FLASH using resistive and ideal magnetohydrodynamics (MHD), and comparing the experiments and simulations suggests that the Spitzer model implemented in FLASH is necessary and sufficient for modeling these planar systems. These results suggest insufficient amplification of the seed B-field, due to resistive diffusion, to alter the hydrodynamic behavior. Although the ideal-MHD simulations did not represent the experiments accurately, they suggest that similar HED systems with dynamic plasma-β (=2μ0ρv2/B2) values of less than ∼100 can reduce the growth of blast-wave-driven Rayleigh–Taylor instabilities. These findings validate the resistive-MHD FLASH modeling that is being used to design future experiments for studying B-field effects in HED plasmas.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Proton deflectometry with in situ x-ray reference for absolute measurement of electromagnetic fields in high-energy-density plasmas

In this work, we report a technique of proton deflectometry that uses a grid and an in situ reference x-ray grid image for precise measurements of magnetic fields in high-energy-density plasmas. A D 3 He fusion implosion provides a bright point source of both protons and x-rays, which is split into beamlets by a grid. The protons undergo deflections as they propagate through the plasma region of interest, whereas the x-rays travel along straight lines. The x-ray image, therefore, provides a zero-deflection reference image. The line-integrated magnetic fields are inferred from the shifts of beamlets between the deflected (proton) and reference (x-ray) images. We developed a system for analysis of these data, including automatic algorithms to find beamlet locations and to calculate their deflections from the reference image. The technique is verified in an experiment performed at OMEGA to measure a nonuniform magnetic field in vacuum and then applied to observe the interaction of an expanding plasma plume with the magnetic field.

47 OTHER INSTRUMENTATION↗

Design of a high energy density experiment to measure the suppression of hydrodynamic instability in an applied magnetic field

A transverse magnetic field can suppress the hydrodynamic instability growth of an unstable plasma interface. This effect, of interest to inertial confinement fusion and astrophysics, has mostly been studied via simulation. Here, we present the design of an experiment at the National Ignition Facility (NIF) to demonstrate this effect in a laboratory. Simulations indicate that the timescale for the diffusion of the magnetic field across the mixing region should be at least comparable to the timescale of the instability growth in order to have a measurable suppression effect. This motivates the use of lower density target materials than usual high energy density (HED) hydrodynamics experiments to permit faster hydrodynamics and higher plasma conductivities (through higher temperature), for a given laser drive and magnetic field. We discuss a target design for creating a Rayleigh–Taylor unstable HED plasma interface that uses 320 mg/cc iodine-doped carbon foam as the heavy material, 20 mg/cc carbon foam as the light material, and a 6 lm amplitude, a 120 lm wavelength ripple machined at the interface, which shows a measurable suppression effect with a nominal NIF drive and a 30 T magnetic field (the present facility limit). Here, models indicate lower density foams that may display even larger suppression effects, as the Hohlraum drive also radiatively preheats the foam to permit even higher temperatures and, hence, higher conductivities.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Strong reconnection electric fields in shock-driven turbulence

Turbulent magnetic reconnection in a quasi-parallel shock under parameters relevant to the Earth's bow shock is investigated by means of a two-dimensional particle-in-cell simulation. The addressed aspects include the reconnection electric field, the reconnection rate, and the electron and the ion outflow speeds. In the shock transition region, many current sheets are generated in shock-driven turbulence, and electron-only reconnection and reconnection where both ions and electrons are involved can occur in those current sheets. The electron outflow speed in electron-only reconnection shows a positive correlation with the theoretical speed, which is close to the local electron Alfvén speed, and a strong convection electric field is generated by the large electron outflow. As a result, the reconnection electric field becomes much larger than those in the standard magnetopause or magnetotail reconnection. In shock-driven reconnection that involves ion dynamics, both electron outflows and ion outflows can reach of the order of 10 times the Alfvén speed in the X-line rest frame, leading to a reconnection electric field the same order as that in electron-only reconnection. An electron-only reconnection event observed by the magnetospheric multiscale mission downstream of a quasi-parallel shock is qualitatively similar to those in the simulation and shows that the outflow speed reaches approximately half the local electron Alfvén speed, supporting the simulation prediction.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Analysis of synthetic electron cyclotron emission from the high field side of HL-2M tokamak plasmas

A synthetic electron cyclotron emission (ECE) diagnostic is used to interpret ECE signals from preset plasma equilibrium profiles, including magnetic field, electron density, and electron temperature. According to the simulation results, the electron temperature (T e ) profile covering the harmonic overlap region can be obtained by receiving ECE signals at the high field side (HFS) of the HL-2M plasma. The third harmonic ECE at the low field side (LFS) cannot pass through the second harmonic resonance layer at the HFS unless the optical thickness (τ) of the second harmonic becomes gray (τ ≤ 2). In addition, the impact of the relativistic frequency down-shift has been evaluated and corrected. The measurable range of the HFS ECE has been calculated by scanning different parameters (electron density, temperature, and magnetic field). Higher plasma parameters allow a wider radial range of electron temperature measurements. The minimum inner measurable position can reach R = 120 cm (r/a = -0.89) when the product of core temperature (T e0 ) and density (n e0 ) is greater than 35 × 10 19 keV m -3 , which is extended by more than 30 cm inward compared with that of the LFS measurement. The HFS ECE will greatly improve the diagnostic ability of ECE systems on the HL-2M tokamak.

47 OTHER INSTRUMENTATION↗

Spatial heterodyne spectroscopy for fast local magnetic field measurements of magnetized fusion plasmas

A novel spectroscopy diagnostic for measuring internal magnetic fields in high temperature magnetized plasmas has been developed. It involves spectrally resolving the Balmer- α (656 nm) neutral beam radiation split by the motional Stark effect with a spatial heterodyne spectrometer (SHS). The unique combination of high optical throughput (3.7 mm 2 sr) and spectral resolution (δλ ~ 0.1 nm) allows these measurements to be made with time resolution $\ll$1 ms. The high throughput is effectively utilized by incorporating a novel geometric Doppler broadening compensation technique in the spectrometer. The technique significantly reduces the spectral resolution penalty inherent to using large area, high-throughput optics while still collecting the large photon flux provided by such optics. In this work, fluxes of order 10 10 s –1 support the measurement of deviations of <5 mT (Δ λ Stark ~ 10 –4 nm) in the local magnetic field with 50 µs time resolution. Example high time resolution measurements of the pedestal magnetic field throughout the ELM cycle of a DIII-D tokamak plasma are presented. Local magnetic field measurements give access to the dynamics of the edge current density, which is essential to understanding stability limits, edge localized mode generation and suppression, and predicting performance of H-mode tokamaks.

47 OTHER INSTRUMENTATION↗

Characterization of fast magnetosonic waves driven by compact toroid plasma injection along a magnetic field

Magnetosonic waves are low-frequency, linearly polarized magnetohydrodynamic (MHD) waves commonly found in space, responsible for many well-known features, such as heating of the solar corona. In this work, we report observations of interesting wave signatures driven by injecting compact toroid (CT) plasmas into a static Helmholtz magnetic field at the Big Red Ball Facility at Wisconsin Plasma Physics Laboratory. By comparing the experimental results with the MHD theory, we identify that these waves are the fast magnetosonic modes propagating perpendicular to the background magnetic field. Additionally, we further investigate how the background field, preapplied poloidal magnetic flux in the CT injector, and the coarse grid placed in the chamber affect the characteristics of the waves. Since this experiment is part of an ongoing effort of creating a target plasma with tangled magnetic fields as a novel fusion fuel for magneto-inertial fusion (MIF), our current results could shed light on future possible paths of forming such a target for MIF.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗