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DOE OSTI2021

Sensor Domain of Histidine Kinase VxrA of Vibrio cholerae : Hairpin-Swapped Dimer and Its Conformational Change

VxrA and VxrB are cognate histidine kinase (HK)-response regulator (RR) pairs of a two-component signaling system (TCS) found in Vibrio cholerae, a bacterial pathogen that causes cholera. The VxrAB TCS positively regulates virulence, the type VI secretion system, biofilm formation, and cell wall homeostasis in V. cholerae, providing protection from environmental stresses and contributing to the transmission and virulence of the pathogen. The VxrA HK has a unique periplasmic sensor domain (SD) and, remarkably, lacks a cytoplasmic linker domain between the second transmembrane helix and the dimerization and histidine phosphotransfer (DHp) domain, indicating that this system may utilize a potentially unique signal sensing and transmission TCS mechanism. Here, we have determined several crystal structures of VxrA-SD and its mutants. These structures reveal a novel structural fold forming an unusual β hairpin-swapped dimer. A conformational change caused by relative rotation of the two monomers in a VxrA-SD dimer could potentially change the association of transmembrane helices and, subsequently, the pairing of cytoplasmic DHp domains. Based on the structural observation, we propose a putative scissor-like closing regulation mechanism for the VxrA HK. IMPORTANCE V. cholerae has a dynamic life cycle, which requires rapid adaptation to changing external conditions. Two-component signal transduction (TCS) systems allow V. cholerae to sense and respond to these environmental changes. The VxrAB TCS positively regulates a number of important V. cholerae phenotypes, including virulence, the type six secretion system, biofilm formation, and cell wall homeostasis. Here, we provide the crystal structures of the VxrA sensor histidine kinase sensing domain and propose a mechanism for signal transduction. The cognate signal for VxrAB remains unknown; however, in this work we couple our structural analysis with functional assessments of key residues to further our understanding of this important TCS.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2023

Microbial drought resistance may destabilize soil carbon

Droughts are becoming more frequent and intense with climate change. As plants and microbes respond to drought, there may be consequences for the vast stocks of organic carbon stored in soils. If microbes sustain their activity under drought, soils could lose carbon, especially if inputs from plants decline. Empirical and theoretical studies reveal multiple mechanisms of microbial drought resistance, including tolerance and avoidance. Physiological responses allow microbes to acclimate to drought within minutes to days. Along with dispersal, shifts in community composition could allow microbiomes to maintain functioning despite drought. Microbes might also adapt to drier conditions through evolutionary processes. Together, these mechanisms could result in soil carbon losses larger than currently anticipated under climate change.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2022

Surface warming in global cities is substantially more rapid than in rural background areas

Warming trends in cities are influenced both by large-scale climate processes and by local-scale urbanization. However, little is known about how surface warming trends of global cities differ from those characterized by weather observations in the rural background. Here, through statistical analyses of satellite land surface temperatures (2002 to 2021), we find that the mean surface warming trend is 0.50 ± 0.20 K·decade –1 (mean ± one S.D.) in the urban core of 2000-plus city clusters worldwide, and is 29% greater than the trend for the rural background. On average, background climate change is the largest contributor explaining 0.30 ± 0.11 K·decade –1 of the urban surface warming. In city clusters in China and India, however, more than 0.23 K·decade –1 of the mean trend is attributed to urban expansion. We also find evidence of urban greening in European cities, which offsets 0.13 ± 0.034 K·decade –1 of background surface warming.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2023

Analysis of Water-Energy Issues for Nuclear Power with Industry Perspective

The water-energy nexus is a dynamic, ever evolving challenge involving technological changes, regulatory updates, economic constraints, environmental issues, and political attributes. This report expands on a previous report that gave an initial assessment of the water-energy nexus challenges facing the U.S. commercial industry. This follow-up report provides analysis and insights from stakeholder interviews focusing on the issues faced by the U.S. commercial nuclear energy industry within the water-energy nexus space. This report updates and expand the “Cooling Water Issues and Opportunities at U.S. Nuclear Power Plants” This report includes analysis on water withdrawal and consumption by operating nuclear reactors, evolving policy risks that could impact the operation of the existing commercial nuclear fleet, implications of water markets, trading and water rights, the changing energy grid, progressing environmental risks (including analysis on the possible impact of climate change on water availability and nuclear power plant performance), and opportunities to reduce water related risk. The feedback from the stakeholders’ interviews helps incorporate viewpoints from within the nuclear and related industry that can lack representation in other research areas, without constituting a comprehensive opinion survey. Stakeholders interviewed include nuclear power plants operators, water treatment providers, developers, and vendors of reactor technologies.

99 GENERAL AND MISCELLANEOUS↗

DOE OSTI2020

Parameterizing Perennial Bioenergy Crops in Version 5 of the Community Land Model Based on Site‐Level Observations in the Central Midwestern United States

Abstract With projected expansion of biofuel production at a global scale, there is a pressing need to develop adequate representation of bioenergy crops in land surface models to help effectively quantify the biogeophysical and biogeochemical effects of its associated land use changes. This study implements two new perennial bioenergy crops, Miscanthus and switchgrass, into the Community Land Model Version 5 based on site‐level observations from the midwestern United States by modifying parameters associated with photosynthesis, phenology, allocation, decomposition, and carbon cost of nitrogen uptake and integrating concomitantly land management practices. Sensitivity analyses indicate that carbon and energy fluxes of the perennial crops are most sensitive to photosynthesis and phenology parameters. Validation of simulated fluxes against site‐level measurements demonstrates that the model is capable of capturing the overall patterns of energy and carbon fluxes, as well as physiological transitions from leaf emergence to senescence. Compared to annual crops, perennial crops feature longer growing season, greater leaf areas, and higher productivity, leading to increased transpiration, lower annual runoff, and larger carbon uptake. The model simulations suggest that with higher CO 2 assimilation rates and lower demands for nutrients and water, high‐yielding perennial crops are promising alternatives of bioenergy feedstocks compared to traditional annual crops not only for mitigating climate change but also for environmental conservation purposes by reducing fertilizer application and therefore alleviating surface‐ and ground‐water contaminations. Although the local‐scale simulations shed light on potential benefits of using perennial grasses as bioenergy feedstocks, quantifying consequences of their plantations at larger scales warrants additional investigation.

Cheng, Yanyan↗

NASA NTRS1978

Extended duration Orbiter life support definition

Extending the baseline seven-day Orbiter mission to 30 days or longer and operating with a solar power module as the primary source for electrical power requires changes to the existing environmental control and life support (ECLS) system. The existing ECLS system imposes penalties on longer missions which limit the Orbiter capabilities and changes are required to enhance overall mission objectives. Some of these penalties are: large quantities of expendables, the need to dump or store large quantities of waste material, the need to schedule fuel cell operation, and a high landing weight penalty. This paper presents the study ground rules and examines the limitations of the present ECLS system against Extended Duration Orbiter mission requirements. Alternate methods of accomplishing ECLS functions for the Extended Duration Orbiter are discussed. The overall impact of integrating these options into the Orbiter are evaluated and significant Orbiter weight and volume savings with the recommended approaches are described.

Kleiner, G. N.↗

NASA NTRS1984

Forest Environments

The application of remote sensing measurement techniques to scientific questions involving forests is a necessity because of the extent of forests, their variability, and the need to measure their interaction with environmental processes. The synoptic view given by remote sensing data of the extent, variability, and relation to environmental processes involving energy balances, disposition of water, and tree growth in relation to elemental storage of carbon, nitrogen and other essential elements is essential to understanding the forest in a scientific way. The ability to make comparisons in these properties at various intervals allows the determination of process functions and rates where the forest affects environmental properties. The ultimate objective in using these data is to define the extent of the forest and wildland resource, to determine the changes that are occurring in the resource due to utilization by man under conditions of changing market and population demands, and to evaluate the correlated changes occurring in various environmental properties influenced by forest vegetation on a local as well as global scale.

Zinke, P.↗

DOE OSTI2024

Toward Enhancing Wastewater Treatment with Resource Recovery in Integrated Assessment and Computable General Equilibrium Models

Sustainable water management is essential to increasing water availability and decreasing water pollution. The wastewater sector is expanding globally and beginning to incorporate technologies that recover nutrients from wastewater. Nutrient recovery increases energy consumption but may reduce the demand for nutrients from virgin sources. We estimate the increase in annual global energy consumption (1,100 million GJ) and greenhouse gas emissions (84 million t CO2e) for wastewater treatment in the year 2030 compared to today’s levels to meet sustainable development goals. To capture these trends, integrated assessment and computable general equilibrium models that address the energy-water nexus must evolve. We reviewed 16 of these models to assess how well they capture wastewater treatment plant energy consumption and GHG emissions. Only three models include biogas production from the wastewater organic content. Four explicitly represent energy demand for wastewater treatment, and eight include explicit representation of wastewater treatment plant greenhouse gas emissions. Of those eight models, six models quantify methane emissions from treatment, five include representation of emissions of nitrous oxide, and two include representation of emissions of carbon dioxide. Our review concludes with proposals to improve these models to better capture the energy-water nexus associated with the evolving wastewater treatment sector.

42 ENGINEERING↗

DOE OSTI2020

The Environmental Molecular Sciences Laboratory (EMSL) 2020 Fact Sheet

EMSL, the Environmental Molecular Sciences Laboratory, is a U.S. Department of Energy (DOE) Office of Science User Facility supported by the DOE Office of Biological and Environmental Research (BER). Research at EMSL supports BER’s mission to understand the biological, biogeochemical, and physical principles needed to predict a continuum of processes occurring at the molecular and genomics-controlled smallest scales to environmental and Earth system change at the largest scales. EMSL is in Richland, WA, at Pacific Northwest National Laboratory.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2021

Emerging Energy Market Analysis Initiative, Methodological Framework

Planning and operations of the electric power sector are undergoing radical changes. Climate change mitigation efforts have forced rapid changes to the technology mix. Technologies like wind and solar have experienced rapid growth, while investment in fossil sources has peaked or is declining. These foundational changes are forcing changes to energy systems. Demand-side adoption of electrified technologies, including electric vehicles, is changing load profiles and opening up new avenues for consumer participation in the power systems. The implications of an evolving power system pertain to more than environmental and technical dimensions. Changes to the generation mix and its consequent upstream and downstream impacts such as fuel production have significant and highly concentrated consequences on economies and employment. Shifts towards distributed (or decentralized) generating assets offer the potential to reshape economic and employment opportunities associated with the energy sector across space and socioeconomic groups. The Emerging Energy Market Analysis (EMA) initiative aims to identify sustainable, regionally acceptable, and high-value energy solutions that are secure and equitable. Unlike short-term, least-cost choices that can narrowly account for traditional options, EMA’s focus on emerging energy markets recognizes that new or adapted practices and technologies can alter the frontier of solutions and advance a community’s social, economic, and natural pathways. Such change requires a more comprehensive analysis of societal input, resources, capabilities, and infrastructure. These considerations lay the foundation for community decision-making models that are responsive to community values as well as the history and drivers. The result is a community-based decision and engagement model that will be valuable to decisionmakers and developers of advanced and emerging energy solutions, seeking a social license to operate prior to project development.

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

NASA NTRS1992

Molecular properties of polymeric materials for space applications

This cooperative agreement was intended to investigate the effects of a space environment on the properties of polymeric materials. In addition, efforts have been made to understand and investigate environment simulation techniques and test methodology. The results identified the changes in the properties of six aerospace structural adhesives, three neat high polymers, and two fiber-reinforced polymers, as caused by exposure to four simulated space environmental conditions. Significant property changes occurred for several of the systems as a result of one or more of the exposures. A summary of the research follows a list of related publications and presentations.

Harries, Wynford L.↗

DOE OSTI2023

Environmental controls on observed spatial variability of soil pore water geochemistry in small headwater catchments underlain with permafrost

Abstract. Soil pore water (SPW) chemistry can vary substantially across multiple scales in Arctic permafrost landscapes. The magnitude of these variations and their relationship to scale are critical considerations for understanding current controls on geochemical cycling and for predicting future changes. These aspects are especially important for Arctic change modeling where accurate representation of sub-grid variability may be necessary to predict watershed-scale behaviors. Our research goal is to characterize intra- and inter-watershed soil water geochemical variations at two contrasting locations in the Seward Peninsula of Alaska, USA. We then attempt to identify the key factors controlling concentrations of important pore water solutes in these systems. The SPW geochemistry of 18 locations spanning two small Arctic catchments was examined for spatial variability and its dominant environmental controls. The primary environmental controls considered were vegetation, soil moisture and/or redox condition, water–soil interactions and hydrologic transport, and mineral solubility. The sampling locations varied in terms of vegetation type and canopy height, presence or absence of near-surface permafrost, soil moisture, and hillslope position. Vegetation was found to have a significant impact on SPW NO3- concentrations, associated with the localized presence of nitrogen-fixing alders and mineralization and nitrification of leaf litter from tall willow shrubs. The elevated NO3- concentrations were, however, frequently equipoised by increased microbial denitrification in regions with sufficient moisture to support it. Vegetation also had an observable impact on soil-moisture-sensitive constituents, but the effect was less significant. The redox conditions in both catchments were generally limited by Fe reduction, seemingly well-buffered by a cache of amorphous Fe hydroxides, with the most reducing conditions found at sampling locations with the highest soil moisture content. Non-redox-sensitive cations were affected by a wide variety of water–soil interactions that affect mineral solubility and transport. Identification of the dominant controls on current SPW hydrogeochemistry allows for qualitative prediction of future geochemical trends in small Arctic catchments that are likely to experience warming and permafrost thaw. As source areas for geochemical fluxes to the broader Arctic hydrologic system, geochemical processes occurring in these environments are particularly important to understand and predict with regards to such environmental changes.

Conroy, Nathan Alec (ORCID:0000000305973373)↗

NASA NTRS2021

Analysis and Monitoring of Cyber-Physical Systems via Environmental Domain Knowledge & Modeling

While verifying adherence to a specification (i.e., specification-based testing) is important, the results are only as valid as the specification itself. Problematically, verifying a system specification must be done within the context of changing or even unknown environmental domain knowledge that could render the specification ineffective or incorrect. This issue is even more apparent in the context of self-adaptive systems, where uncertainty in both the system configuration and environment can impact the validity of the system. This paper introduces a method to explicitly model domain knowledge of the environment as a secondary system to enable design-time verification against documented environmental assumptions (i.e., those elements external to the system). In addition, run-time monitors are used to detect scenarios in the actual environment not specified by the modeled environmental domain knowledge. Rather than simply identifying unexpected inputs, our approach is able to identify run-time violations of the environmental domain knowledge, even when inputs appear valid based on the domain assumptions embedded in the system specification. These violations can then be used to correspondingly update the system and environmental specifications via automated run-time adaptation or subsequent design-time revisions. We illustrate our approach by applying our method to a running example of a goal-based model of a baby monitor.

Byron DeVries↗

DOE OSTI2024

Critical Literature Review of Low Global Warming Potential (GWP) Refrigerants and their Environmental Impact

Refrigeration and air conditioning currently account for ~20% of the total electricity consumption in buildings around the world. Over the next three decades as global temperatures are projected to increase, urbanization and economic growth will lead to an increased demand for refrigeration and cooling. Most commonly used refrigerants belong to the five following classes: (i) chlorofluorocarbons, (ii) hydrochlorofluorocarbons, (iii) hydrofluorocarbons (HFCs), (iv) hydrofluoroolefins (HFOs), and (v) natural refrigerants. Over the past century, there have been shifts in which compounds were used for refrigeration to improve safety and durability, allow for ozone protection, and, most recently, to reduce global warming potential (GWP). Although technological advances have led to increased cooling capacity and safer refrigerants, emissions from refrigeration systems can affect the environment by contributing to greenhouse gas emissions or by depleting the ozone layer, depending on the gas emitted. The focus is increasingly on adopting compounds that are both efficient at cooling and effective for reducing emissions and other adverse environmental impacts. Because of policy and regulatory changes to avert ozone depletion and global climate change, much discussion has centered on the environmental impacts of next-generation refrigerants. Of particular interest are the fluorinated refrigerants, HFCs and HFOs, most of which are defined as per- and polyfluoroalkyl substances (PFAS) and their breakdown products (especially trifluoroacetic acid). The US Environmental Protection Agency in 2021 drafted a Strategic Roadmap for PFAS, which has already resulted in an increase in investment in research on these compounds and has restricted the release of PFAS into the environment through the implementation of monitoring and reporting requirements. A critical evaluation of fluorinated refrigerants and their breakdown products with respect to persistence, biodegradation and toxicity, and global warming potential is needed to guide environmental regulations. This document aims to perform a critical review of the relevant scientific data on the most common refrigerants currently used, their degradation products, and their alternatives. Where available, estimates of precursor production quantities and existing environmental regulatory information are reviewed. Key data of interest for the evaluation include physicochemical properties, environmental fate parameters, ecological or human health toxicity/risk information, and GWP for compounds of interest.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2024

Critical Literature Review of Low Global Warming Potential (GWP) Refrigerants and their Environmental Impact

54 ENVIRONMENTAL SCIENCES↗

NASA NTRS1982

Evaluation and prediction of long-term environmental effects on nonmetallic materials

Changes in functional properties of a broad spectrum of nonmetallic materials as a function of environment and exposure time were evaluated. Models for predicting long-term material performance are discussed. A literature search on specific materials in the space and simulated space environment was carried out and evaluated.

Source record↗

NASA NTRS2022

Economic incentives modify agricultural impacts of nuclear war

A nuclear war using less than 1% of the current global nuclear arsenal, which would inject 5 Tg of soot into the stratosphere, could produce climate change unprecedented in recorded human history and significant impacts on agricultural productivity and the economy. These effects would be most severe for the first five years after the nuclear war and may last for more than a decade. This paper calculates how food availability would change by employing the Environmental Impact and Sustainability Applied General Equilibrium model. Under a robust world trading system, global food availability would drop by a few percentage points. If the war would destabilize trade, it would magnify by several times the negative ramifications of land productivity shocks on food availability. If exporting countries redirect production to domestic consumption at the expense of importing countries, it would lead to the destabilization of international trade. The analysis suggests that economic models aiming to inform policymakers require both economic behavior analysis and biophysical drivers. Policy lessons derived from a crop model can be significantly nuanced when coupled with economic feedback derived from economic models. Through the impact on yield, farmers could shift production among crops and reallocate land use to maximize profits, showing the importance of general equilibrium effects such as product and input substitution and international trade. Although the global impact on corn and soybean production would be significant when just considering crop production, it could be considerably smaller under the economic model. However, this would be at the expense of other sectors, including livestock. In addition, the costs borne from disruptions to climate would vary significantly across regions, with significant adverse effects in high latitude regions. The severity of the shocks in the high-latitude areas would marginalize the farmers' product and input substitution ability.

Nuclear war↗

NASA NTRS1991

Climate and society in 20th century Mexico

Mexican agriculture has been greatly transformed by the widespread introduction of 'Green Revolution' technologies (irrigation, chemical fertilizers, and improved seeds), through land reform, and by land use policies oriented to export crops and grain production. Drought prone Mexico provides an excellent case to study how technological and social changes alter the impact of drought on food and agricultural system. A goal is to document and understand how relationships between climate and agriculture in Mexico have changed in the last fifty years. The results for several locations will be interpreted in light of the prospects of regional climate change due to global warming. This analysis will be complimented by four case studies of vulnerability to drought which will use local records and interviews to try and show how environmental, technological, and social changes may have altered the impacts of climate on local agricultural systems.

Liverman, Diana M.↗