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At least 991 records · Page 55

Data for "Which plant traits increase soil carbon sequestration? Empirical evidence from a long-term poplar genetic diversity trial"

This archive contains all data and code used by the following publication: Field, J. L., Sloan, B. P., Craig, M. E., Calloway, P., Ottinger, S. L., Mead, T., Abramoff, R. Z., Venegas, M. P., Chhetri, H. B., Haiby, K., Kalluri, U. C., Muchero, W., Schadt, C. W., & Mayes, M. A. (2025). Which plant traits increase soil carbon sequestration? Empirical evidence from a long-term poplar genetic diversity trial (p. 2025.02.17.638464). bioRxiv. https://doi.org/10.1101/2025.02.17.638464 Our analysis combined several soil and root data sets collected by Oak Ridge National Laboratory (ORNL) researchers/collaborators from the Clatskanie Poplar Common Garden in Clatskanie, OR by from 2009-2024. The raw data data files are located */02-data/01-raw/* which we harmonized using the codes in */01-codes/01-harmonize-clatskanie-data-pub.qmd*. The final processed data set used in the paper is found at */02-data/02-processed/clatskanie-c-fit-data.csv* and its columns are described in the table below.

Sloan, Brandon [ORNL] (ORCID:0000000316304271)↗

Metis – A Tool to Harmonize and Analyze Multi-Sectoral Data and Linkages at Variable Spatial Scales

Metis was developed to allow users to analyze regional and sub-regional multi-sector dynamics by providing a platform to harmonize and amalgamate data from different models and stakeholders operating at variable spatial scales. Metis is an open-source R package hosted on GitHub. Metis functions collectively allow users to compare, manipulate, and harmonize multi-sector data at user-specified spatial scales, and to identify and quantify sectoral inter-linkages. Each Metis function can also be used independently to support an array of other research applications, such as spatial analysis and data visualization.

97 MATHEMATICS AND COMPUTING↗

Variability of the observed temperature, 20-60 km at 80 deg N to 40 deg S

Results are presented for a periodic analysis of atmospheric temperature variations at heights of from 20 to 60 km between 80 deg N and 40 deg S. The analysis is based on Meteorological Rocket Network temperatures not corrected for solar radiation or aliasing by the diurnal tide, and the frequencies examined include the long-term mean, the quasi-biennial oscillation (QBO), and the first six harmonics of the annual wave. Amplitudes are plotted for the long-term mean and QBO as well as for the annual, semiannual, and terannual components. The results show two distinct annual oscillations (the high-latitude one and another above the tropical stratopause) and a polar semiannual wave with two centers of large amplitude that are 90 deg out of phase and separated by a zone of minimum amplitude near 45 km.

Nastrom, G. D.↗

Pulsation of double-mode Cepheids and comments on the problem of Cepheid masses

The double mode Cepheids are stars, found near the low luminosity end of the Population I Cepheid strip, which display a mixture of modes where the longer of the two periods is between two and four days. It is usually assumed that the mixture is composed of fundamental and first harmonic modes. In order to obtain the various physical parameters for the double mode Cepheids, the pulsation constant, Q, is determined in the period-mean-density relation for realistic stellar models, by making use of a linearized nonadiabatic analysis. By studying a large number of models that obey a variety of mass luminosity relations, simple fitting formulas for the pulsation constants are obtained.

King, D. S.↗

Scatter of elastic waves by a thin flat elliptical inhomogeneity

Elastodynamic fields of a single, flat, elliptical inhomogeneity embedded in an infinite elastic medium subjected to plane time harmonic waves are studied. Scattered displacement amplitudes and stress intensities are obtained in series form for an incident wave in an arbitrary direction. The cases of a penny shaped crack and an elliptical crack are given as examples. The analysis is valid for alpha a up to about two, where alpha is longitudinal wave number and a is a typical geometric parameter.

Fu, L. S.↗

Hybrid methods for rotordynamic analysis

Effective procedures are presented for the response analysis of the Space Shuttle Main Engine turbopumps under transient loading conditions. Of particular concern is the determination of the nonlinear response of the systems to rotor imbalance in presence of bearing clearances. The proposed procedures take advantage of the nonlinearities involved being localized at only a few rotor/housing coupling joints. The methods include those based on integral formulations for the incremental solutions involving the transition matrices of the rotor and housing. Alternatively, a convolutional representation of the housing displacements at the coupling points is proposed which would allow performing the transient analysis on a reduced model of the housing. The integral approach is applied to small dynamical models to demonstrate the efficiency of the approach. For purposes of assessing the numerical integration results for the nonlinear rotor/housing systems, a numerical harmonic balance procedure is developed to enable determining all possible harmonic, subharmonic, and nonperiodic solutions of the systems. A brief account of the Fourier approach is presented as applied to a two degree of freedon rotor-support system.

Noah, Sherif T.↗

Symmetric Galerkin boundary formulations employing curved elements

Accounts of the symmetric Galerkin approach to boundary element analysis (BEA) have recently been published. This paper attempts to add to the understanding of this method by addressing a series of fundamental issues associated with its potential computational efficiency. A new symmetric Galerkin theoretical formulation for both the (harmonic) heat conduction and the (biharmonic) elasticity problem that employs regularized singular and hypersingular boundary integral equations (BIEs) is presented. The novel use of regularized BIEs in the Galerkin context is shown to allow straightforward incorporation of curved, isoparametric elements. A symmetric reusable intrinsic sample point (RISP) numerical integration algorithm is shown to produce a Galerkin (i.e., double) integration strategy that is competitive with its counterpart (i.e., singular) integration procedure in the collocation BEA approach when the time saved in the symmetric equation solution phase is also taken into account. This new formulation is shown to be capable of employing hypersingular BIEs while obviating the requirement of C 1 continuity, a fact that allows the employment of the popular continuous element technology. The behavior of the symmetric Galerkin BEA method with regard to both direct and iterative equation solution operations is also addressed. A series of example problems are presented to quantify the performance of this symmetric approach, relative to the more conventional unsymmetric BEA, in terms of both accuracy and efficiency. It is concluded that appropriate implementations of the symmetric Galerkin approach to BEA indeed have the potential to be competitive with, if not superior to, collocation-based BEA, for large-scale problems.

Kane, J. H.↗

Free-air and Bouguer gravity anomalies and the Martian crustal dichotomy

Free-air and Bouguer gravity anomalies from a 50x50 field, derived from re-analysis of Viking Orbiter and Mariner 9 tracking data and using a 50x50 expansion of the current Mars topography and the GSFC degree 50 geoid as the equipotential reference surface, with the Martian crustal dichotomy are compared. The spherical harmonic topography used has zero mean elevation, and differs from the USGS maps by about 2 km. In this field the dichotomy boundary in eastern Mars lies mostly at -1 to -2 km elevation. Bouguer gravity anomalies are shown on a map of Noachian, Hesperian, and Amazonian age terrains, simplified from current geologic maps. The map is centered at 300 deg W to show the continuity of the dichotomy boundary. Contour interval is 100 mgals. Gravity and topography were compared along approximately 40 profiles oriented parallel to the dichotomy boundary topographic gradient, to determine how the geophysical character of the boundary changes along its length and what this implies for its origin and development.

Frey, Herbert↗

Applications of the Hilbert-Huang Transform

A new method, the Hilbert-Huang Transform, has been developed for analyzing nonlinear and nonstationary data. The key part of the method is the Empirical Mode Decomposition with which any complicated data set can be decomposed into a finite and often small number of Intrinsic Mode Functions (IMF). An M is defined as any function having the same numbers of zero-crossing and extrema, and also having symmetric envelopes defined by the local maxima and minima respectively. The IMF also admits well-behaved Hilbert transform. This decomposition method is adaptive, and, therefore, highly efficient. Since the decomposition is based on the local characteristic time scale of the data, it is applicable to nonlinear and nonstationary processes. With the Hilbert transform, the Intrinsic Mode Functions yield instantaneous frequencies'as functions of time that give sharp identifications of imbedded structures. The final presentation of the results is an energy-frequency-time distribution, designated as the Hilbert Spectrum. With this technique we can examine the detailed dynamics characteristics of a nonlinear system through the instantaneous frequency rather than harmonics. Thus it constitutes a new view of the nonlinear dynamics. Examples of classic nonlinear equations and other nonlinear and nonstationary data sets will be used as examples to illustrate the advantage of the application of this new data analysis method.

Huang, Norden E.↗

Tail Buffeting

An approximate theory of buffeting is here presented, based on the assumption of harmonic disturbing forces. Two cases of buffeting are considered: namely, for a tail angle of attack greater and less than the stalling angle, respectively. On the basis of the tests conducted and the results of foreign investigators, a general analysis is given of the nature of the forced vibrations the possible load limits on the tail, and the methods of elimination of buffeting.

Abdrashitov, G.↗

Chirality-Dependent Second Harmonic Generation of MoS 2 Nanoscroll with Enhanced Efficiency

Materials with high second harmonic generation (SHG) efficiency and reduced dimensions are favorable for integrated photonics and nonlinear optical applications. Here, we fabricate MoS 2 nanoscrolls with different chiralities and study their SHG performances. As a 1D material, MoS 2 nanoscroll shows reduced symmetry and strong chirality dependency in the polarization-resolved SHG characterizations. This SHG performance can be well explained by the superposition theory of second harmonic field of the nanoscroll walls. MoS 2 nanoscrolls with certain chiralities and diameters in our experiment can have SHG intensity up to 95 times stronger than that of monolayer MoS 2 , and the full potential can still be further exploited. The same chirality-dependent SHG can be expected for nanoscrolls or nanotubes composed of other noncentrosymmetric 2D materials, such as WS 2 , WSe 2 , and hBN. Here, the characterization and analysis results presented here can also be exploited as a nondestructive technique to determine the chiralities of these nanoscrolls and nanotubes.

42 ENGINEERING↗

Analysis of synthetic electron cyclotron emission from the high field side of HL-2M tokamak plasmas

A synthetic electron cyclotron emission (ECE) diagnostic is used to interpret ECE signals from preset plasma equilibrium profiles, including magnetic field, electron density, and electron temperature. According to the simulation results, the electron temperature (T e ) profile covering the harmonic overlap region can be obtained by receiving ECE signals at the high field side (HFS) of the HL-2M plasma. The third harmonic ECE at the low field side (LFS) cannot pass through the second harmonic resonance layer at the HFS unless the optical thickness (τ) of the second harmonic becomes gray (τ ≤ 2). In addition, the impact of the relativistic frequency down-shift has been evaluated and corrected. The measurable range of the HFS ECE has been calculated by scanning different parameters (electron density, temperature, and magnetic field). Higher plasma parameters allow a wider radial range of electron temperature measurements. The minimum inner measurable position can reach R = 120 cm (r/a = -0.89) when the product of core temperature (T e0 ) and density (n e0 ) is greater than 35 × 10 19 keV m -3 , which is extended by more than 30 cm inward compared with that of the LFS measurement. The HFS ECE will greatly improve the diagnostic ability of ECE systems on the HL-2M tokamak.

47 OTHER INSTRUMENTATION↗

Consideration of permanent tidal deformation in the orbit determination and data analysis for the Topex/Poseidon mission

The effects of the permanent tidal effects of the Sun and Moon with specific applications to satellite altimeter data reduction are reviewed in the context of a consistent definition of geoid undulations. Three situations are applicable not only for altimeter reduction and geoid definition, but also for the second degree zonal harmonic of the geopotential and the equatorial radius. A recommendation is made that sea surface heights and geoid undulations placed on the Topex/Poseidon geophysical data record should be referred to the mean Earth case (i.e., with the permanent effects of the Sun and Moon included). Numerical constants for a number of parameters, including a flattening and geoid geopotential, are included.

Rapp, Richard H.↗

Search for evidence of a clock related to the solar 154 day complex of periodicities

Evidence that has recently been compiled (Bai and Sturrock 1991) indicates that the enigmatic 154-day periodicity in solar activity may be viewed as part of a complex of periodicities that are approximate multiples of 25.8 days, suggesting that the Sun contains a 'clock' with frequency in the range 440 to 463 nano Hz. The clock may comprise either an oscillator or a rotator, each of which may be either real or virtual. We have reconsidered a previous spectrum analysis of the Zurich sunspot-number sequence by Knight, Schatten, and Sturrock (1979) which revealed a sharp, persistent and significant periodicity with a period of 12.072 days, corresponding to a frequency of about 958.8 nano Hz. This periodicity may be regarded as the (second) upper sideband of the second harmonic (2nu(sub R) + 2nu(sub E)) of a fundamental frequency of 447.7 nano Hz that is clearly within the search band. In this expression, nu(sub R) is the sidereal frequency of the hypothetical rotator and nu(sub E) is the frequency (31.69 nano Hz) of the Earth in its orbital motion around the Sun. In analyzing sunspot area data derived from the Greenwich data set, and on noting that any frequency is defined only to within the Nyquist frequency, we find clear evidence not only for the upper sideband of the second harmonic, but also for the second harmonic (2nu(sub R)) and the lower sideband of the second harmonic (2nu(sub R) - 2nu(sub E)). There is no strong peak at the fundamental frequency in the Greenwich data, but there is in the Zurich sunspot data. The effect of a linear oscillator is, to the lowest order in the amplitude, the same as the combined effect of two rotators of opposite polarities. A rotator that has arbitrary orientation with respect to the ecliptic may influence the outer layers of the Sun and thereby modulate the occurrence of solar activity such as sunspots. By analyzing a simple model, we find that such a rotator would influence surface activity in such a way that the spectrum of a 'signal' (such as the record of sunspots), as seen from the Earth, would contain components with frequencies that are certain integral combinations of nu(sub R) and nu(sub E). The amplitudes of the various components depend sensitively on theta, the angle between the axis of the rotator and the axis of the Earth's orbital motion. This simple model therefore offers a kinematical (but not dynamical) interpretation of the sunspot spectrum. The present analysis, while offering support of our conjectures that the Sun contains a clock that regulates the 154-day complex of periodicities, cannot distinguish between an osillator or a rotator (that might be a traveling wave), nor between a real rotator or a virtual rotator (that might be an apparent traveling wave due to the aliasing effect of an oscillator in a rotating system). Further analysis of sunspot and other data sets will be required to confirm the existence of such clock and (if it is real) to determine its physical nature.

Sturrock, P. A.↗

Dynamic Phasor Modeling of Various Multipulse Rectifiers and a VSI Fed by 18-Pulse Asymmetrical Autotransformer Rectifier Unit for Fast Transient Analysis

To study the fast modelling of dynamic characteristics caused by power electronic switching, the dynamic phasor (DP) theory based on the time-varying Fourier decomposition and frequency shifting is firstly applied to the modelling of various multipulse rectifiers. The DP model for symmetrical 12-pulse phase-shifting reactor rectifier unit (PSR-RU) is derived with model order reduction, relations between ac and dc terminals, and Taylor series expansion. The DP model of asymmetrical 18-pulse autotransformer rectifier unit (AT-RU) is proposed based on the switching functions expressed in the DP domain. Meanwhile, the DP model of voltage source inverter (VSI) fed by asymmetrical 18-pulse AT-RU is built with the harmonic state-space (HSS) equations. Under both balanced and unbalanced conditions, the good calculation accuracy and rapid simulation speed of the developed DP models are validated by the detailed time-domain (TD) simulation.

42 ENGINEERING↗

Toroidal modeling of energetic passing particle drift kinetic effects on tearing mode stability

Abstract Drift kinetic effects of the neutral beam injection induced passing energetic particles (EPs) on the linear stability of the n = 1 tearing mode (TM) (with the dominant poloidal harmonic of m = 2) are numerically investigated utilizing the MARS-K code (Liu et al 2008 Phys. Plasmas 15 112503), in a tokamak plasma with finite equilibrium pressure and anisotropic thermal transport. In the low plasma pressure regime, it is found that co- (counter-) passing EPs stabilize (destabilize) the TM, agreeing with previous studies. However, as the plasma pressure increases beyond a critical value, it is found that co-passing EPs also destabilize the mode. An in-depth analysis reveals that the net effect of co-passing EPs is a result of competition between the stabilizing contribution from the non-adiabatic drift kinetic terms and the destabilizing contribution associated with adiabatic terms, with the latter becoming more dominant at higher equilibrium pressure. Non-perturbative magnetohydrodynamic-kinetic hybrid modeling also finds that co- and counter-passing EPs modify the TM eigenfunction differently, with the counter-passing EPs enhancing the sideband harmonics. Furthermore, effects of the plasma resistivity and toroidal rotation, as well as that of the equilibrium distribution of EPs in the particle pitch angle space, are also investigated, showing asymmetric results on the TM stability between the co- and counter-passing EPs. The first order finite orbit width correction is found to be stabilizing with co-passing EPs and destabilizing with counter-passing particles. Finally, drift resonances between passing EPs and the TM induce finite frequency to the mode and generate finite net torques inside the plasma, due to the neoclassical toroidal viscosity and the Reynolds stress associated with 3D perturbations.

Physics↗

NSTX-U theory, modeling and analysis results

Here, the mission of the low aspect ratio spherical tokamak NSTX-U is to advance the physics basis and technical solutions required for optimizing the configuration of next-step steady-state tokamak fusion devices. NSTX-U will ultimately operate at up to 2 MA of plasma current and 1 T toroidal field on axis for 5 s, and has available up to 15 MW of neutral beam injection power at different tangency radii and 6 MW of high harmonic fast wave heating. With these capabilities NSTX-U will develop the physics understanding and control tools to ramp-up and sustain high performance fully non-inductive plasmas with large bootstrap fraction and enhanced confinement enabled via the low aspect ratio, high beta configuration. With its unique capabilities, NSTX-U research also supports ITER and other critical fusion development needs. Super-Alfvénic ions in beam-heated NSTX-U plasmas access energetic particle (EP) parameter space that is relevant for both α-heated conventional and low aspect ratio burning plasmas. NSTX-U can also generate very large target heat fluxes to test conventional and innovative plasma exhaust and plasma facing component solutions. This paper summarizes recent analysis, theory and modelling progress to advance the tokamak physics basis in the areas of macrostability and 3D fields, EP stability and fast ion transport, thermal transport and pedestal structure, boundary and plasma material interaction, RF heating, scenario optimization and real-time control.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Validation of finite element analysis strategy to investigate acoustic levitation in a two-axis acoustic levitator

A two-axis acoustic levitator can be used to generate a standing pressure wave capable of levitating solid and liquid particles at appropriate input conditions. This work proposes a simulation framework to investigate the two-axis levitation particle stability using a commercial, computational fluid dynamics software based on the harmonic solution to the acoustic wave equation. The simulation produced predictions of the standing wave that include a strong "+" shaped pattern of nodes and anti-nodes that are aligned with the levitator axes. To verify the simulation, a levitator was built and used to generate the standing wave. The field was probed with a microphone and a motorized-scanning system. After scaling the simulated pressure to the measured pressure, the magnitudes of the sound pressure level at corresponding high-pressure locations were different by no more than 5%. This is the first time a measurement of a two-axis levitator standing pressure wave has been presented and shown to verify simulations. Furthermore, as an additional verification, the authors consulted high speed camera measurements of a reference-levitator transducer, which was found to have a maximum peak-to-peak displacement of 50 +/- 5 mu m. The reference-levitator is known to levitate water at 160 dB. The system for this work was simulated to match the operation of the reference-levitator so that it produced sound pressure levels of 160 dB. This pressure was achieved when the transducer maximum peak-to-peak displacement was 50.8 mu m. The agreement between the two levitators' displacements provides good justification that the modeling approach presented here produces reliable results.

2 axis levitator↗