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At least 991 records · Page 55

pnnl/metagenomic_analysis

Metagenomic analysis is a computationally intensive task, this problem is compounded when many hundreds of samples need to be analyzed. We needed a program that would process the metagenomic sequencing data, manage computing resources, and combine the results into a unified output. We developed a script that prepares raw metagenomic sequencing data for analysis, configures analysis parameters, launches analysis jobs, keeps track of analysis progress, and combines analysis output. The analysis itself itself is done by the functionality provided by mothur (https://www.mothur.org/).

Avila, Andrew↗

National facilities study. Volume 5: Space research and development facilities task group

With the beginnings of the U.S. space program, there was a pressing need to develop facilities that could support the technology research and development, testing, and operations of evolving space systems. Redundancy in facilities that was once and advantage in providing flexibility and schedule accommodation is instead fast becoming a burden on scarce resources. As a result, there is a clear perception in many sectors that the U.S. has many space R&D facilities that are under-utilized and which are no longer cost-effective to maintain. At the same time, it is clear that the U.S. continues to possess many space R&D facilities which are the best -- or among the best -- in the world. In order to remain world class in key areas, careful assessment of current capabilities and planning for new facilities is needed. The National Facility Study (NFS) was initiated in 1992 to develop a comprehensive and integrated long-term plan for future aerospace facilities that meets current and projected government and commercial needs. In order to assess the nation's capability to support space research and development (R&D), a Space R&D Task Group was formed. The Task Group was co-chaired by NASA and DOD. The Task Group formed four major, technologically- and functionally- oriented working groups: Human and Machine Operations; Information and Communications; Propulsion and Power; and Materials, Structures, and Flight Dynamics. In addition to these groups, three supporting working groups were formed: Systems Engineering and Requirements; Strategy and Policy; and Costing Analysis. The Space R&D Task Group examined several hundred facilities against the template of a baseline mission and requirements model (developed in common with the Space Operations Task Group) and a set of excursions from the baseline. The model and excursions are described in Volume 3 of the NFS final report. In addition, as a part of the effort, the group examined key strategic issues associated with space R&D facilities planning for the U.S., and these are discussed in Section 4 of this volume.

Source record↗

Space Station maintenance studies using plaid graphics

The Graphics Analysis Facility (GRAF) has been used frequently to study extravehicular activity (EVA) maintenance scenarios on Space Station Freedom. The ability to use 3-dimensional visualization gives one a more accurate estimate of the Space Station environment. Moreover, human EVA and robotic kinematics can be accurately simulated for columetric reach and collision detection analysis. An animation of this kind was developed for a research group at JSC to study and discover problem areas involved with doing external Space Station maintenance tasks. On the EVA side, it was discovered that items such as handholds and temporary restraint mechanisms should more effectively facilitate EVA movement about the Space Station structure for the suited personnel. Issues concerning CETA cart configuration, PWP storage locations, and locations of EVA storage areas were also identified by use of the animation. In the area of EVA versus robotics, it was found that there is a strong desire to make EVA and robotics interfaces compatible on items such as replacement units and unpressurized logistics carriers. The animation also showed that the use of robotics within an EVA task increases the difficulty and duration of the task setup, leaving less time available for the maintenance task itself. Graphics animation provides a mechanism to simultaneously analyze several mission parameters (i.e., EVA reach, volumetric analysis, and task timelines), and thus, it has proven to be an effective method for mission evaluation.

Helm, Mary E.↗

Safety Case for Service Contracts

Safety cases developed for the Facilities Management and Operations Center (FMOC) are based on the requirements in MN471021, Work Planning and Control Criteria for Safe Design and Operations. The FMOC performs maintenance activities in various locations at Sandia National Laboratories, New Mexico (SNL/NM). SNL/NM consists of more than 6,000,000 square feet of buildings, structures, and site infrastructure on approximately 13,000 acres of land. The FMOC performs approximately 7500 service contract work orders a year to assist with operations and maintenance at the SNL/NM site and facilities. As part of the continual improvement process, this Safety Case will be reviewed and updated, as needed, or at a minimum every three years. People tend to underestimate the probability of an accident if none have occurred previously or if the person performing the work is skilled, and they tend to trust each other’s competence. Human error within systems must be identified and considered. The FMOC uses failure mode analysis (FMA) to determine how a system might fail and cause accidents, as well as the amount and types of controls needed. The FMOC includes interconnected elements, such as people, environment, procedures, facilities, equipment, and the hazards identified in the work analysis. A daily pre-task plan is required prior to any work activity. Changes in work practices will be communicated clearly to all service contractors and personnel by way of contractor pre-task planning, activity-specific plans, contract amendments, and/or training. The FMOC has created a safe-by-design intent approach for service contract execution starting at the planning stage and extending through the execution phase. The Safety Program (see Figure 2) summarizes how the FMOC connects work analysis elements with service contracts.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗

Workload-Matched Adaptive Automation Support of Air Traffic Controller Information Processing Stages

Adaptive automation (AA) has been explored as a solution to the problems associated with human-automation interaction in supervisory control environments. However, research has focused on the performance effects of dynamic control allocations of early stage sensory and information acquisition functions. The present research compares the effects of AA to the entire range of information processing stages of human operators, such as air traffic controllers. The results provide evidence that the effectiveness of AA is dependent on the stage of task performance (human-machine system information processing) that is flexibly automated. The results suggest that humans are better able to adapt to AA when applied to lower-level sensory and psychomotor functions, such as information acquisition and action implementation, as compared to AA applied to cognitive (analysis and decision-making) tasks. The results also provide support for the use of AA, as compared to completely manual control. These results are discussed in terms of implications for AA design for aviation.

Kaber, David B.↗

Reliability analysis in intelligent machines

Given an explicit task to be executed, an intelligent machine must be able to find the probability of success, or reliability, of alternative control and sensing strategies. By using concepts for information theory and reliability theory, new techniques for finding the reliability corresponding to alternative subsets of control and sensing strategies are proposed such that a desired set of specifications can be satisfied. The analysis is straightforward, provided that a set of Gaussian random state variables is available. An example problem illustrates the technique, and general reliability results are presented for visual servoing with a computed torque-control algorithm. Moreover, the example illustrates the principle of increasing precision with decreasing intelligence at the execution level of an intelligent machine.

Mcinroy, John E.↗

DOE Hydrogen, Fuel Cells and Infrastructure Technologies Program Integrated Hydrogen Production, Purification and Compression System

The project was started in April 2005 with the objective to meet the DOE target of delivered hydrogen of <$1.50/gge, which was later revised by DOE to $2-$3/gge range for hydrogen to be competitive with gasoline as a fuel for vehicles. For small, on-site hydrogen plants being evaluated at the time for refueling stations (the 'forecourt'), it was determined that capital cost is the main contributor to the high cost of delivered hydrogen. The concept of this project was to reduce the cost by combining unit operations for the entire generation, purification, and compression system (refer to Figure 1). To accomplish this, the Fluid Bed Membrane Reactor (FBMR) developed by MRT was used. The FBMR has hydrogen selective, palladium-alloy membrane modules immersed in the reformer vessel, thereby directly producing high purity hydrogen in a single step. The continuous removal of pure hydrogen from the reformer pushes the equilibrium 'forward', thereby maximizing the productivity with an associated reduction in the cost of product hydrogen. Additional gains were envisaged by the integration of the novel Metal Hydride Hydrogen Compressor (MHC) developed by Ergenics, which compresses hydrogen from 0.5 bar (7 psia) to 350 bar (5,076 psia) or higher in a single unit using thermal energy. Excess energy from the reformer provides up to 25% of the power used for driving the hydride compressor so that system integration improved efficiency. Hydrogen from the membrane reformer is of very high, fuel cell vehicle (FCV) quality (purity over 99.99%), eliminating the need for a separate purification step. The hydride compressor maintains hydrogen purity because it does not have dynamic seals or lubricating oil. The project team set out to integrate the membrane reformer developed by MRT and the hydride compression system developed by Ergenics in a single package. This was expected to result in lower cost and higher efficiency compared to conventional hydrogen production technologies. The overall objective was to develop an integrated system to directly produce high pressure, high-purity hydrogen from a single unit, which can meet the DOE cost H2 cost target of $2 - $3/gge when mass produced. The project was divided into two phases with the following tasks and corresponding milestones, targets and decision points. Phase 1 - Task 1 - Verify feasibility of the concept, perform a detailed techno-economic analysis, and develop a test plan; and Task 2: Build and experimentally test a Proof of Concept (POC) integrated membrane reformer/metal hydride compressor system. Phase 2 - Task 3: Build an Advanced Prototype (AP) system with modifications based on POC learning and demonstrate at a commercial site; and Task 4: Complete final product design for mass manufacturing units capable of achieving DOE 2010 H2 cost and performance targets.

02 PETROLEUM↗

Simulation development and evaluation of an improved longitudinal velocity vector control wheel steering mode and electronic display format

Using simulation, an improved longitudinal velocity vector control wheel steering mode and an improved electronic display format for an advanced flight system were developed and tested. Guidelines for the development phase were provided by test pilot critique summaries of the previous system. The results include performances from computer generated step column inputs across the full airplane speed and configuration envelope, as well as piloted performance results taken from a reference line tracking task and an approach to landing task conducted under various environmental conditions. The analysis of the results for the reference line tracking and approach to landing tasks indicates clearly detectable improvement in pilot tracking accuracy with a reduction in physical workload. The original objectives of upgrading the longitudinal axis of the velocity vector control wheel steering mode were successfully met when measured against the test pilot critique summaries and the original purpose outlined for this type of augment control mode.

Steinmetz, G. G.↗

NEUP Final Report: Analysis of Thermal Transients for a Sodium-CO 2 Heat Exchanger

The design of heat exchangers for use in a supercritical carbon dioxide (sCO 2 ) Brayton cycle power converter must provide for acceptable performance for duty cycle events encompassing anticipated transients and postulated accidents. Argonne National Laboratory participated in the NEUP project, “Thermal Hydraulic and Structural Testing and Modeling of Compact Diffusion-Bonded Heat Exchangers for Supercritical CO 2 Brayton Cycle” with the task of conducting a comprehensive analysis of thermal transients for sCO 2 cycle heat exchangers, with emphasis on the sodium-to-CO 2 heat addition heat exchanger. A range of transients, from normal operation to severe accidents, were simulated with the coupled PDC and SAS4A/SASSYS-1 system level dynamic analysis computer codes. For each transient, the calculated change in the heat exchanger wall temperature is determined as a measure of the thermal loading. In addition, an analysis to find an equivalent helium-CO 2 heat exchanger was carried out to facilitate testing with helium rather than sodium on the hot side.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

Analysis of Respirator Cartridge Performance Testing on Hanford Tank AX-101

Washington River Protection Solutions (WRPS) conducted tests using two types of chemical cartridges for use in air purifying respirators to determine the period of time that the cartridges would provide adequate protection to worker when exposed to a mixture of Chemicals of Potential Concern (COPCs) from vapors emanating from the headspace of tank AX-101 on the Hanford Site. Pacific Northwest National Laboratory (PNNL) was tasked with conducting an independent analysis of the analytical results and making recommendations based on the results for respiratory cartridge performance and change schedules.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Rapid Exploitation and Analysis of Documents

Analysts are overwhelmed with information. They have large archives of historical data, both structured and unstructured, and continuous streams of relevant messages and documents that they need to match to current tasks, digest, and incorporate into their analysis. The purpose of the READ project is to develop technologies to make it easier to catalog, classify, and locate relevant information. We approached this task from multiple angles. First, we tackle the issue of processing large quantities of information in reasonable time. Second, we provide mechanisms that allow users to customize their queries based on latent topics exposed from corpus statistics. Third, we assist users in organizing query results, adding localized expert structure over results. Forth, we use word sense disambiguation techniques to increase the precision of matching user generated keyword lists with terms and concepts in the corpus. Fifth, we enhance co-occurrence statistics with latent topic attribution, to aid entity relationship discovery. Finally we quantitatively analyze the quality of three popular latent modeling techniques to examine under which circumstances each is useful.

97 MATHEMATICS AND COMPUTING↗

Pilot Field Test: Performance of a Sit-to-Stand Test After Long-Duration Space Flight

BACKGROUND: Astronauts returning from the International Space Station are met by a team of recovery personnel typically providing physical assistance and medical support immediately upon landing. That is because long-duration spaceflight impacts astronauts' functional abilities. Future expeditions to planets or asteroids beyond the low Earth orbit, however, may require crewmembers to egress the vehicle and perform other types of physical tasks unassisted. It is therefore important to characterize the extent and longevity of functional deficits experienced by astronauts in order to design safe exploration class missions. Pilot Field Test (PFT) experiment conducted with participation of ISS crewmembers traveling on Soyuz expeditions 34S - 41S comprised several tasks designed to study the recovery of sensorimotor abilities of astronauts during the first 24 hours after landing and beyond. METHODS: The first test in the PFT battery sequence, and also the least demanding one from the sensorimotor perspective, was a Sit-to-Stand test. Test subjects were seated in the chair and had to stand up on command and remain standing for ten seconds. The subjects were instructed to stand up unassisted as quickly as they were able to, while maintaining postural control. Synchronized wireless inertial sensors mounted on the head, chest, lower back, wrists, and ankles were used to continuously log body kinematics. Crewmembers' blood pressure and heart rate were monitored and recorded with the Portapres and Polar systems. Each session was recorded with a digital video camera. During data collections occurring within the 24-hour postflight period, crewmembers were also asked to (1) evaluate their perceived motion sickness symptoms on a 20-point scale before and after completion of the test and (2) estimate how heavy they felt compared to their normal (preflight) body weight. Consent to participate in PFT was obtained from 18 crewmembers (11 US Orbital Segment [USOS] astronauts and 7 Russian cosmonauts). For 10 subjects, the first set of data was collected in the medical tent in Soyuz landing zone (1-2 hours after landing); the other 8 subjects were tested at the Kazakhstan deployment airport (4-5 hours after landing). 8 of the 11 astronauts were tested twice more within the first 24 hours postflight, at a refueling stop on the way to Houston (approximately 13 hours after landing) and at the Johnson Space Center (approximately 24 hours after landing). Later postflight data were collected in the first two weeks on some crewmembers. Finally, 6 astronauts were tested 60+ days after landing to establish a delayed baseline. RESULTS/DISCUSSION: Two of the 18 PFT participants felt too ill to attempt any tests in Kazakhstan (at either the landing zone or deployment airport). The remaining test subjects completed the Sit-to-Stand test and their reported motion sickness scores were unaffected by this task. The task completion times and body kinematics data analysis are currently underway. Preliminary analysis of astronaut data shows a steep improvement in the time to complete the task on the second data take, and in some cases, the trend continues through day six postflight. Head and trunk pitch angles and pitch rates were also examined and increases in all measures are evident throughout the observed recovery period (60+ days postflight). Interesting patterns of head and trunk pitch coordination have also emerged. One of the data analysis objectives is comparison of initial postflight performance and recovery of experienced crewmembers and first-time fliers. Another one - possible differences in performance between USOS and Russian crewmembers.

Kofman, I. S.↗

Analysis of Respirator Cartridge Performance Testing on Hanford Tank BY-108 (Rev.1)

Washington River Protection Solutions (WRPS) conducted tests using two types of chemical cartridges for use in air purifying respirators to determine the period of time that the cartridges would provide adequate protection to worker when exposed to a mixture of Chemicals of Potential Concern (COPCs) from vapors emanating from the headspace of tank BY-108 on the Hanford Site. Pacific Northwest National Laboratory (PNNL) was tasked with conducting an independent analysis of the analytical results and making recommendations based on the results for respiratory cartridge performance and change schedules.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Teaching audience analysis to the technical student

Teaching audience analysis, as practiced in a technical writing course for engineering students, is discussed. Audience analysis is described as the task of defining the audience for a particular piece of writing and determining those characteristics of the audience which constrain the writer and effect reception of the message. A mature technical writing style that shows the tension produced when a text is written to be read and understood is considered in terms of audience analysis. Techniques include: (1) conveying to students the concept that a reader with certain expectations exist, (2) team teaching to preserve the context of a given technical discipline, and (3) assigning a technical report that addresses a variety of readers, thus establishing the complexity of audience oriented writing.

Debs, M. B.↗

TADS--A CFD-Based Turbomachinery Analysis and Design System with GUI: User's Manual

The primary objective of this study was the development of a Computational Fluid Dynamics (CFD) based turbomachinery airfoil analysis and design system, controlled by a Graphical User Interface (GUI). The computer codes resulting from this effort are referred to as TADS (Turbomachinery Analysis and Design System). This document is intended to serve as a User's Manual for the computer programs which comprise the TADS system, developed under Task 18 of NASA Contract NAS3-27350, ADPAC System Coupling to Blade Analysis & Design System GUI and Task 10 of NASA Contract NAS3-27394, ADPAC System Coupling to Blade Analysis & Design System GUI, Phase II-Loss, Design and, Multi-stage Analysis. TADS couples a throughflow solver (ADPAC) with a quasi-3D blade-to-blade solver (RVCQ3D) in an interactive package. Throughflow analysis and design capability was developed in ADPAC through the addition of blade force and blockage terms to the governing equations. A GUI was developed to simplify user input and automate the many tasks required to perform turbomachinery analysis and design. The coupling of the various programs was done in such a way that alternative solvers or grid generators could be easily incorporated into the TADS framework. Results of aerodynamic calculations using the TADS system are presented for a highly loaded fan, a compressor stator, a low speed turbine blade and a transonic turbine vane.

Koiro, M. J.↗

Risk Analysis for Resource Planning Optimization

This paper describes a systems engineering approach to resource planning by integrating mathematical modeling and constrained optimization, empirical simulation, and theoretical analysis techniques to generate an optimal task plan in the presence of uncertainties.

optimization↗

A scene-analysis approach to remote sensing

The author has identified the following significant results. Geometric correspondance between a sensed image and a symbolic map is established in an initial stage of processing by adjusting parameters of a sensed model so that the image features predicted from the map optimally match corresponding features extracted from the sensed image. Information in the map is then used to constrain where to look in an image, what to look for, and how to interpret what is seen. For simple monitoring tasks involving multispectral classification, these constraints significantly reduce computation, simplify interpretation, and improve the utility of the resulting information. Previously intractable tasks requiring spatial and textural analysis may become straightforward in the context established by the map knowledge. The use of map-guided image analysis in monitoring the volume of water in a reservoir, the number of boxcars in a railyard, and the number of ships in a harbor is demonstrated.

Tenenbaum, J. M.↗

Improvements to a method for the geometrically nonlinear analysis of compressively loaded stiffened composite panels

This report describes progress made during the period July 1991 to December 1991 on the tasks identified in the technical proposals for the subject grant. The plans for further effort on each of the tasks are outlined. The computer implementation of the method of analysis under development is referred to in this document as NLPAN. These tasks included: (1) implementation of continuation methods; (2) dynamic analysis capability; (3) additional boundary condition options for the panel ends; (4) transverse pressure loading; (5) second-order displacement fields; and (6) results for an i-stiffened panel with a complex cross section.

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