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At least 991 records · Page 55

A 4DCT imaging-based breathing lung model with relative hysteresis

To reproduce realistic airway motion and airflow, the authors developed a deforming lung computational fluid dynamics (CFD) model based on four-dimensional (4D, space and time) dynamic computed tomography (CT) images. A total of 13 time points within controlled tidal volume respiration were used to account for realistic and irregular lung motion in human volunteers. Because of the irregular motion of 4DCT-based airways, we identified an optimal interpolation method for airway surface deformation during respiration, and implemented a computational solid mechanics-based moving mesh algorithm to produce smooth deforming airway mesh. In addition, we developed physiologically realistic airflow boundary conditions for both models based on multiple images and a single image. Furthermore, we examined simplified models based on one or two dynamic or static images. By comparing these simplified models with the model based on 13 dynamic images, we investigated the effects of relative hysteresis of lung structure with respect to lung volume, lung deformation, and imaging methods, i.e., dynamic vs. static scans, on CFD-predicted pressure drop. The effect of imaging method on pressure drop was 24 percentage points due to the differences in airflow distribution and airway geometry. - Highlights: • We developed a breathing human lung CFD model based on 4D-dynamic CT images. • The 4DCT-based breathing lung model is able to capture lung relative hysteresis. • A new boundary condition for lung model based on one static CT image was proposed. • The difference between lung models based on 4D and static CT images was quantified.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

A two-stage adaptive stochastic collocation method on nested sparse grids for multiphase flow in randomly heterogeneous porous media

A new computational method is proposed for efficient uncertainty quantification of multiphase flow in porous media with stochastic permeability. For pressure estimation, it combines the dimension-adaptive stochastic collocation method on Smolyak sparse grids and the Kronrod–Patterson–Hermite nested quadrature formulas. For saturation estimation, an additional stage is developed, in which the pressure and velocity samples are first generated by the sparse grid interpolation and then substituted into the transport equation to solve for the saturation samples, to address the low regularity problem of the saturation. Numerical examples are presented for multiphase flow with stochastic permeability fields to demonstrate accuracy and efficiency of the proposed two-stage adaptive stochastic collocation method on nested sparse grids.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Bayesian seismic inversion based on rock-physics prior modeling for the joint estimation of acoustic impedance, porosity and lithofacies

We propose a Bayesian approach for seismic inversion to estimate acoustic impedance, porosity and lithofacies within the reservoir conditioned to post-stack seismic and well data. The link between elastic and petrophysical properties is given by a joint prior distribution for the logarithm of impedance and porosity, based on a rock-physics model. The well conditioning is performed through a background model obtained by well log interpolation. Two different approaches are presented: in the first approach, the prior is defined by a single Gaussian distribution, whereas in the second approach it is defined by a Gaussian mixture to represent the well data multimodal distribution and link the Gaussian components to different geological lithofacies. The forward model is based on a linearized convolutional model. For the single Gaussian case, we obtain an analytical expression for the posterior distribution, resulting in a fast algorithm to compute the solution of the inverse problem, i.e. the posterior distribution of acoustic impedance and porosity as well as the facies probability given the observed data. For the Gaussian mixture prior, it is not possible to obtain the distributions analytically, hence we propose a Gibbs algorithm to perform the posterior sampling and obtain several reservoir model realizations, allowing an uncertainty analysis of the estimated properties and lithofacies. Both methodologies are applied to a real seismic dataset with three wells to obtain 3D models of acoustic impedance, porosity and lithofacies. The methodologies are validated through a blind well test and compared to a standard Bayesian inversion approach. Using the probability of the reservoir lithofacies, we also compute a 3D isosurface probability model of the main oil reservoir in the studied field.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Pass-efficient methods for compression of high-dimensional turbulent flow data

The future of high-performance computing, specifically on future Exascale computers, will presumably see memory capacity and bandwidth fail to keep pace with data generated, for instance, from massively parallel partial differential equation (PDE) systems. Current strategies proposed to address this bottleneck entail the omission of large fractions of data, as well as the incorporation of in situ compression algorithms to avoid overuse of memory. To ensure that post-processing operations are successful, this must be done in a way that a sufficiently accurate representation of the solution is stored. Moreover, in situations where the input/output system becomes a bottleneck in analysis, visualization, etc., or the execution of the PDE solver is expensive, the number of passes made over the data must be minimized. In the interest of addressing this problem, this work focuses on the utility of pass-efficient, parallelizable, low-rank, matrix decomposition methods in compressing high-dimensional simulation data from turbulent flows. Additionally, a particular emphasis is placed on using coarse representation of the data – compatible with the PDE discretization grid – to accelerate the construction of the low-rank factorization. This includes the presentation of a novel single-pass matrix decomposition algorithm for computing the so-called interpolative decomposition. The methods are described extensively and numerical experiments on two turbulent channel flow data are performed. In the first (unladen) channel flow case, compression factors exceeding 400 are achieved while maintaining accuracy with respect to first- and second-order flow statistics. In the particle-laden case, compression factors of 100 are achieved and the compressed data is used to recover particle velocities. These results show that these compression methods can enable efficient computation of various quantities of interest in both the carrier and disperse phases.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Gradient-based constrained optimization using a database of linear reduced-order models

A methodology grounded in model reduction is presented for accelerating the gradient-based solution of a family of linear or nonlinear constrained optimization problems where the constraints include at least one linear Partial Differential Equation (PDE). A key component of this methodology is the construction, during an offline phase, of a database of pointwise, linear, Projection-based Reduced-Order Models (PROM)s associated with a design parameter space and the linear PDE(s). A parameter sampling procedure based on an appropriate saturation assumption is proposed to maximize the efficiency of such a database of PROMs. A real-time method is also presented for interpolating at any queried but unsampled parameter vector in the design parameter space the relevant sensitivities of a PROM. The practical feasibility, computational advantages, and performance of the proposed methodology are demonstrated for several realistic, nonlinear, aerodynamic shape optimization problems governed by linear aeroelastic constraints.

97 MATHEMATICS AND COMPUTING↗

Conservative remapping of material-dependent fields between possibly misaligned material regions

In this work, we propose an interpolation or remapping algorithm of material-dependent fields on polyhedral meshes where any source or target cell contains only one material. It is conservative and it preserves sharp material boundaries on the target mesh, even if the source and target regions delineating the same material are slightly misaligned. If those material regions are aligned, then the algorithm is also linearity-preserving and bounds-preserving. For a given material, it consists of a conservative field reconstruction on a target mesh part from a source mesh part associated with that material, followed by a repair step in case of misaligned boundaries. No assumption is made regarding the topology of the input meshes

36 MATERIALS SCIENCE↗

Proper orthogonal decomposition based reduced-order modeling of flux-Limited gray thermal radiation

Here, in this work, a proper orthogonal decomposition (POD) based reduced-order model (ROM) is developed to solve gray, flux-limited thermal radiation diffusion. We focus on the variable opacity radiation penetration benchmark posed by Olson, Auer, and Hall. The T -3 relationship for opacity in conjunction with high-temperature radiation penetrating an initially cold material produces a strong thermal radiation shock. This class of problems is particularly challenging for standard POD-based reduced-order modeling due to the nonlinearities presented by 1) the T 4 source term, and 2) flux-limited diffusion operator. To address these challenges and develop a cost competitive ROM, we employ a “hyper-reduction” technique through discrete empirical interpolation (DEIM) and allow for adaptive reduced-order projections through principal interval decomposition (PID). Performance of the proposed methodology is quantified by comparing the cost savings and accuracy relative to a full-order computation. Reference solutions and snapshot data are obtained through a full-order calculation performed by the University of Chicago maintained astrophysics code, FLASH. For consistency and potential extensibility, the developed ROM is also implemented in FLASH. We find that in the initialization regime, where the thermal radiation wave is initially created by the warming of the material, this class of problems is highly reducible and suitable for POD-based ROMs. However, the strong convective nature of the wave propagation regime is less reducible and more challenging to create an efficient ROM.

42 ENGINEERING↗

A continuum damage mechanics (CDM) based Wilshire model for creep deformation, damage, and rupture prediction

In this report, a new constitutive model is derived that combines the Wilshire equations with continuum damage mechanics (CDM) to enable the long-term prediction of creep deformation, damage, and rupture. The Wilshire equations have been demonstrated to accurately extrapolate the stress-rupture, minimum-creep-strain-rate, and time-to-strain of various alloys across decade of life. Recently, the time-to-creep-strain equation has been rearranged to predict creep deformation curves; however, the resulting equation is difficult to calibrate and does not track damage. The CDM-based Sinh constitutive model accurately predicts creep deformation, damage, and stress-rupture for a variety of alloys; however, it lacks an explicit description of stress and temperature co-dependence which limits interpolation and extrapolation ability. In this study, the Wilshire and the CDM-based Sinh equations are combined to create the “WCS” model. The WCS model combines the best features of each model while eliminating their deficiencies. Experimental data for alloy P91 is gathered and the WCS model is calibrated to the data. The WCS model accurately predicts the stress rupture, minimum-creep-strain-rate, creep deformation, and damage of alloy P91 across the experimental stress and temperature range as well as consistency in parametric simulations.

36 MATERIALS SCIENCE↗

Spectral analysis of shielded gamma ray sources using precalculated library data

In this paper, an approach has been developed for determining the intensity of a shielded source by first determining the thicknesses of three different shielding materials from a passively collected gamma-ray spectrum by making comparisons with predetermined shielded spectra. These evaluations are dependent on the accuracy and validity of the predetermined library spectra which were created by changing the thicknesses of the three chosen materials lead, aluminum and wood that are used to simulate any actual shielding. Each of the spectra produced was generated using MCNP5 with a sufficiently large number of histories to ensure a low relative error at each channel. The materials were held in the same respective order from source to detector, where each material consisted of three individual thicknesses and a null condition. This then produced two separate data sets of 27 total shielding material situations and subsequent predetermined libraries that were created for each radionuclide source used. The technique used to calculate the thicknesses of the materials implements a Levenberg–Marquardt nonlinear search that employs a tri-linear interpolation with the respective predetermined libraries within each channel for the supplied input unknown spectrum. Given that the nonlinear parameters require an initial guess for the calculations, the approach demonstrates first that when the correct values are input, the correct thicknesses are found. It then demonstrates that when multiple trials of random values are input for each of the nonlinear parameters, the average of the calculated solutions that successfully converges also produced the correct thicknesses. Under situations with sufficient information known about the detection situation at hand, the method was shown to behave in a manner that produces reasonable results and can serve as a good preliminary solution. Finally, this technique has the capability to be used in a variety of full spectrum inverse analysis problems including homeland security issues.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Electrons to Reactors Multiscale Modeling: Catalytic CO Oxidation over RuO 2

First-principles kinetic Monte Carlo (1p-kMC) simulations for CO oxidation on two RuO 2 facets, RuO 2 (110) and RuO 2 (111), were coupled to the computational fluid dynamics (CFD) simulations package MFIX, and reactor-scale simulations were then performed. 1p-kMC coupled with CFD has recently been shown as a feasible method for translating molecular scale mechanistic knowledge to the reactor scale, enabling comparisons to in situ and online experimental measurements. Only a few studies with such coupling have been published. This work incorporates multiple catalytic surface facets into the scale-coupled simulation, and three possibilities were investigated: the two possibilities of each facet individually being the dominant phase in the reactor, and also the possibility that both facets were present on the catalyst particles in the ratio predicted by an ab initio thermodynamics-based Wulff construction. When lateral interactions between adsorbates were included in the 1p-kMC simulations, the two surfaces, RuO 2 (110) and RuO 2 (111), were found to be of similar order-of-magnitude in activity for the pressure range of 1 × 10 –4 bar to 1 bar, with the RuO 2 (110) surface-termination showing more simulated activity than the RuO 2 (111) surface-termination. Coupling between the 1p-kMC and CFD was achieved with a lookup table generated by the error-based modified Shepard interpolation scheme. Isothermal reactor scale simulations were performed and compared to two separate experimental studies, conducted with reactant partial pressures of ≤0.1 bar. Simulations without an isothermality restriction were also conducted and showed that the simulated temperature gradient across the catalytic reactor bed is <0.5 K, which validated the use of the isothermality restriction for investigating the reactor-scale phenomenological temperature dependences. The approach with the Wulff construction based reactor simulations reproduced a trend similar to one experimental data set relatively well, with the (110) surface being more active at higher temperaures; in contrast, for the other experimental data set, our reactor simulations achieve surprisingly and perhaps fortuitously good agreement with the activity and phenomenological pressure dependence when it is assumed that the (111) facet is the only active facet present. Lastly, the active phase of catalytic CO oxidation over RuO 2 remains unsettled, but the present study presents proof of principle (and progress) toward more accurate multiscale modeling from electrons to reactors and new simulation results.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

IUPAC-NIST Solubility Data Series. 100. Rare Earth Metal Fluorides in Water and Aqueous Systems. Part 2. Light Lanthanides (Ce–Eu)

This is the second part of the volume devoted to the evaluation of experimental solubility data for rare earth metal (REM) fluorides in water as well as in aqueous ternary and multicomponent systems. Fluorides of Ce, Pr, Nd, Pm, Sm, and Eu (so-called light lanthanides), as the main solutes, are covered in the present part, which has thorough coverage of the experimental literature through the end of 2012. The experimentally unknown solubility value for PmF{sub 3} in water was predicted by an interpolation of the solubility values for NdF{sub 3} and SmF{sub 3} at 298 K. General features of the systems, such as the nature of the equilibrium solid phases, solubility as a function of temperature, influence of ionic strength, pH, mixed solvent medium on the solubility, quality of the solubility results, and solubility as a function of REM atomic number, have already been presented in Part 1 of the volume.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Numerical estimation of phase transformations in solid state during Yb:YAG laser heating of steel sheets

This work concerns the numerical modeling of heat transfer and phase transformations in solid state occurring during the Yb:YAG laser beam heating process. The temperature field is obtained by the numerical solution into transient heat transfer equation with convective term. The laser beam heat source model is developed using the Kriging interpolation method with experimental measurements of Yb:YAG laser beam profile taken into account. Phase transformations are calculated on the basis of Johnson - Mehl - Avrami (JMA) and Koistinen - Marburger (KM) kinetics models as well as continuous heating transformation (CHT) and continuous cooling transformation (CCT) diagrams for S355 steel. On the basis of developed numerical algorithms 3D computer simulations are performed in order to predict temperature history and phase transformations in Yb:YAG laser heating process.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Quasi-analytical synthesis of continuous phase correcting structures to increase the directivity of circularly polarized Fabry-Perot resonator antennas

This paper presents a quasi-analytical technique to design a continuous, all-dielectric phase correcting structures (PCSs) for circularly polarized Fabry-Perot resonator antennas (FPRAs). The PCS has been realized by varying the thickness of a rotationally symmetric dielectric block placed above the antenna. A global analytical expression is derived for the PCS thickness profile, which is required to achieve nearly uniform phase distribution at the output of the PCS, despite the non-uniform phase distribution at its input. An alternative piecewise technique based on spline interpolation is also explored to design a PCS. It is shown from both far- and near-field results that a PCS tremendously improves the radiation performance of the FPRA. These improvements include an increase in peak directivity from 22 to 120 (from 13.4 dBic to 20.8 dBic) and a decrease of 3 dB beamwidth from 41.5° to 15°. The phase-corrected antenna also has a good directivity bandwidth of 1.3 GHz, which is 11% of the center frequency.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Single scale cluster expansions with applications to many Boson and unbounded spin systems

We develop a cluster expansion to show exponential decay of correlations for quite general single scale spin systems, as they arise in lattice quantum field theory and discretized functional integral representations for observables of quantum statistical mechanics. We apply our results to the small field approximation to the coherent state correlation functions of the grand canonical Bose gas at negative chemical potential, constructed by Balaban et al. [Ann. Henri Poincaré 11, 151–350 (2010c)], and to N component unbounded spin systems with repulsive two body interaction and massive, possibly complex, covariance. Our cluster expansion is derived by a single application of the Brydges-Kennedy-Abdesselam-Rivasseau interpolation formula.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Beam tracking approach for single–shot retrieval of absorption, refraction, and dark-field signals with laboratory x-ray sources

We present the translation of the beam tracking approach for x-ray phase-contrast and dark-field imaging, recently demonstrated using synchrotron radiation, to a laboratory setup. A single absorbing mask is used before the sample, and a local Gaussian interpolation of the beam at the detector is used to extract absorption, refraction, and dark–field signals from a single exposure of the sample. Multiple exposures can be acquired when high resolution is needed, as shown here. A theoretical analysis of the effect of polychromaticity on the retrieved signals, and of the artifacts this might cause when existing retrieval methods are used, is also discussed.

43 PARTICLE ACCELERATORS↗

Reliable measurement of the Seebeck coefficient of organic and inorganic materials between 260 K and 460 K

A new experimental setup for reliable measurement of the in-plane Seebeck coefficient of organic and inorganic thin films and bulk materials is reported. The system is based on the “Quasi-Static” approach and can measure the thermopower in the range of temperature between 260 K and 460 K. The system has been tested on a pure nickel bulk sample and on a thin film of commercially available PEDOT:PSS deposited by spin coating on glass. Repeatability within 1.5% for the nickel sample is demonstrated, while accuracy in the measurement of both organic and inorganic samples is guaranteed by time interpolation of data and by operating with a temperature difference over the sample of less than 1 K.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Reproducing kernel potential energy surfaces in biomolecular simulations: Nitric oxide binding to myoglobin

Multidimensional potential energy surfaces based on reproducing kernel-interpolation are employed to explore the energetics and dynamics of free and bound nitric oxide in myoglobin (Mb). Combining a force field description for the majority of degrees of freedom and the higher-accuracy representation for the NO ligand and the Fe out-of-plane motion allows for a simulation approach akin to a mixed quantum mechanics/molecular mechanics treatment. However, the kernel-representation can be evaluated at conventional force-field speed. With the explicit inclusion of the Fe-out-of-plane (Fe-oop) coordinate, the dynamics and structural equilibrium after photodissociation of the ligand are correctly described compared to experiment. Experimentally, the Fe-oop coordinate plays an important role for the ligand dynamics. This is also found here where the isomerization dynamics between the Fe–ON and Fe–NO state is significantly affected whether or not this co-ordinate is explicitly included. Although the Fe–ON conformation is metastable when considering only the bound {sup 2}A state, it may disappear once the {sup 4}A state is included. This explains the absence of the Fe–ON state in previous experimental investigations of MbNO.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗