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At least 991 records · Page 55

Oxidation Dynamics of Supported Catalytic Cu Clusters: Coupling to Fluxionality

Copper oxide nanoclusters have a wide range of catalytic applications, such as the selective oxidation of hydrocarbons. O 2 binding to the catalyst, activation, and release upon reagent oxidation are key events in these catalytic chemistries. Furthermore, these events are expected to be accompanied by significant structural changes of the Cu clusters, because O atoms integrate into the cluster, rather than bind to its surface. Topping the complexity of the problem, partially oxidized Cu clusters are known to exhibit strong fluxionality and feature diverse and interconverting structures and oxygen contents in conditions of oxidative dehydrogenation (ODH). Hence, a significant dynamic coupling between the “hot” O 2 molecule impacting the cluster at reaction temperatures and the cluster fluxionality can be expected. In this work, we focus on the dynamics of dioxygen integration into a partially oxidized Cu cluster supported on hydroxylated amorphous alumina–a system recently reported to be an exceptionally selective catalyst for cyclohexane ODH with very little CO produced, whose mechanistic underpinnings are of utmost interest. The statistics over a swarm of adsorption and scattering trajectories where O 2 hits various sites on the cluster at reaction temperature shows that the O 2 binding does not only follow the minimal energy paths. O 2 also rarely integrates into the cluster in a single step and instead first binds to a single Cu atom via either an η 1 -O 2 or an η 2 -O 2 mode. Surprisingly, this step often has a higher barrier than the subsequent O 2 integration and dissociation, which in turn take multiple steps and complete the oxidation process. Dynamic trajectories starting from the key transition state of integration of the adsorbed O 2 can also lead to different intermediate structures during or right after the dissociation, due to the energy released from the transition state and the thermal intracluster effects. From these activated O 2 chemisorbed structures, O 2 dissociation occurs with moderate barriers (~0.5 eV), producing multiple final oxidized Cu 4 O 4 states. Hence, a diversity of reaction profiles for the attack of supported Cu cluster by O 2 emerges due to the dynamic effects, with implications for mechanisms, kinetic models, and catalyst design principles.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Finite-Time Universality in Nonequilibrium CFT

Recently, remarkably simple exact results were presented about the dynamics of heat transport in the local Luttinger model for nonequilibrium initial states defined by position-dependent temperature profiles. We present mathematical details on how these results were obtained. We also give an alternative derivation using only algebraic relations involving the energy-momentum tensor which hold true in any unitary conformal field theory (CFT). This establishes a simple universal correspondence between initial temperature profiles and the resulting heat-wave propagation in CFT. We extend these results to larger classes of nonequilibrium states. It is proposed that such universal CFT relations provide benchmarks to identify nonuniversal properties of nonequilibrium dynamics in other models.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Investigating key cell types and molecules dynamics in PyMT mice model of breast cancer through a mathematical model

The most common kind of cancer among women is breast cancer. Understanding the tumor microenvironment and the interactions between individual cells and cytokines assists us in arriving at more effective treatments. Here, we develop a data-driven mathematical model to investigate the dynamics of key cell types and cytokines involved in breast cancer development. We use time-course gene expression profiles of a mouse model to estimate the relative abundance of cells and cytokines. We then employ a least-squares optimization method to evaluate the model’s parameters based on the mice data. The resulting dynamics of the cells and cytokines obtained from the optimal set of parameters exhibit a decent agreement between the data and predictions. We perform a sensitivity analysis to identify the crucial parameters of the model and then perform a local bifurcation on them. The results reveal a strong connection between adipocytes, IL6, and the cancer population, suggesting them as potential targets for therapies.

59 BASIC BIOLOGICAL SCIENCES↗

Simulation and Regression Modeling of Nasa'S X-59 Low-Boom Carpets Across America

NASA’s X-59 aircraft is predicted to produce a significantly quieter cruise sonic boom than traditional N-wave-producing aircraft. A propagation simulation study was undertaken to quantify loudness levels, exposure size, and variability of the X-59’s low-boom carpet using realistic atmospheric profiles across the contiguous United States of America (CONUS). Near-field pressure data of the X-59 in supersonic cruise from NASA’s fully unstructured Navier–Stokes three-dimensional (known as FUN3D) computational fluid dynamics code were propagated using NASA’s PCBoom code, which solves an enhanced Burgers equation along acoustic rays. Atmospheric profiles from the National Oceanic and Atmospheric Administration’s Climate Forecast System Version 2 database were used for propagation at 138 locations across the CONUS. Carpets at each location were generated for aircraft headings in the four cardinal directions. Over one million X-59 carpets were generated in total. The effects of the heading, season, geography, and climate zone on boom levels and exposure size are presented. Multiple linear regression models were developed to estimate carpet width and loudness metrics across the CONUS. These results inform regulators and mission planners on expected variations in boom levels and carpet extent from atmospheric variations. Understanding potential carpet variability is important when planning community noise surveys using the X-59.

X-59↗

Simulation and Regression Modeling of X-59 Low-Boom Carpets Across America

The NASA X-59 aircraft is predicted to produce a significantly quieter cruise sonic boom than traditional N-wave-producing aircraft. A propagation simulation study was undertaken to quantify loudness levels, exposure size, and variability of the X-59 low-boom carpet using realistic atmospheric profiles across the contiguous United States of America (CONUS). Near-field pressure data of the X-59 in supersonic cruise from NASA’s fully unstructured Navier–Stokes three-dimensional (known as FUN3D) computational fluid dynamics code were propagated using NASA’s PCBoom code, which solves an enhanced Burgers equation along acoustic rays. Atmospheric profiles from the National Oceanic and Atmospheric Administration’s Climate Forecast System Version 2 database were used for propagation at 138 locations across the CONUS. Carpets at each location were generated for aircraft headings in the four cardinal directions. Over one million X-59 carpets were generated in total. The effects of the heading, season, geography, and climate zone on boom levels and exposure size are presented. Multiple linear regression models were developed to estimate carpet width and loudness metrics across the CONUS. These results inform regulators and mission planners on expected variations in boom levels and carpet extent from atmospheric variations. Understanding potential carpet variability is important when planning community noise surveys using the X-59.

X-59↗

Why Are There so Few Reports of High-Energy Electron Drift Resonances? Role of Radial Phase Space Density Gradients

Models of monochromatic Pc5 (2–7 mHz) ultralow frequency (ULF) wave interactions with high energy (greater than ~1 MeV) electrons predict drift resonant interactions that can cause rapid radial transport and acceleration. There are few reports of electron drift resonance at energies greater than ~1 MeV, in contrast to lower energies; moreover, all previous reports occur in the aftermath of interplanetary shocks. These two facts are difficult to reconcile with theory and numerical simulations predicting that greater than ~1 MeV drift resonances should occur more often and in a wider variety of driving conditions. In this study, we show that a combination of observational sampling biases and nominal radial phase space density gradients is one explanation for this discrepancy between theory and observations. In particular, we examine electron dynamics in two case studies with very similar satellite coverage, solar wind conditions, and Pc5 wave properties, yet with different radial phase space density profiles. Using global wave and particle observations, we show that the events have vastly different particle responses despite having similar wave properties. Placing these results in context with past studies, we further show here that nominal radial PSD gradients near geostationary orbit can mask the expected drift resonance particle response and explain (1) the small number of past greater than ~1 MeV drift resonance reports and (2) the restriction of these reports to interplanetary shock events. We argue that future observational studies characterizing radial transport via drift resonance should examine global particle dynamics, including observations of the radial phase space density profile.

79 ASTRONOMY AND ASTROPHYSICS↗

Metabolic Model-Based Integration of Microbiome Taxonomic and Metabolomic Profiles Elucidates Mechanistic Links between Ecological and Metabolic Variation

ABSTRACT Multiple molecular assays now enable high-throughput profiling of the ecology, metabolic capacity, and activity of the human microbiome. However, to date, analyses of such multi-omic data typically focus on statistical associations, often ignoring extensive prior knowledge of the mechanisms linking these various facets of the microbiome. Here, we introduce a comprehensive framework to systematically link variation in metabolomic data with community composition by utilizing taxonomic, genomic, and metabolic information. Specifically, we integrate available and inferred genomic data, metabolic network modeling, and a method for predicting community-wide metabolite turnover to estimate the biosynthetic and degradation potential of a given community. Our framework then compares variation in predicted metabolic potential with variation in measured metabolites’ abundances to evaluate whether community composition can explain observed shifts in the community metabolome, and to identify key taxa and genes contributing to the shifts. Focusing on two independent vaginal microbiome data sets, each pairing 16S community profiling with large-scale metabolomics, we demonstrate that our framework successfully recapitulates observed variation in 37% of metabolites. Well-predicted metabolite variation tends to result from disease-associated metabolism. We further identify several disease-enriched species that contribute significantly to these predictions. Interestingly, our analysis also detects metabolites for which the predicted variation negatively correlates with the measured variation, suggesting environmental control points of community metabolism. Applying this framework to gut microbiome data sets reveals similar trends, including prediction of bile acid metabolite shifts. This framework is an important first step toward a system-level multi-omic integration and an improved mechanistic understanding of the microbiome activity and dynamics in health and disease. IMPORTANCE Studies characterizing both the taxonomic composition and metabolic profile of various microbial communities are becoming increasingly common, yet new computational methods are needed to integrate and interpret these data in terms of known biological mechanisms. Here, we introduce an analytical framework to link species composition and metabolite measurements, using a simple model to predict the effects of community ecology on metabolite concentrations and evaluating whether these predictions agree with measured metabolomic profiles. We find that a surprisingly large proportion of metabolite variation in the vaginal microbiome can be predicted based on species composition (including dramatic shifts associated with disease), identify putative mechanisms underlying these predictions, and evaluate the roles of individual bacterial species and genes. Analysis of gut microbiome data using this framework recovers similar community metabolic trends. This framework lays the foundation for model-based multi-omic integrative studies, ultimately improving our understanding of microbial community metabolism.

Noecker, Cecilia↗

Improved Protein Arrays for Quantitative Systems Analysis of the Dynamics of Signaling Pathway Interactions

Astronauts and workers in nuclear plants who repeatedly exposed to low doses of ionizing radiation (IR, <10 cGy) are likely to incur specific changes in signal transduction and gene expression in various tissues of their body. Remarkable advances in high throughput genomics and proteomics technologies enable researchers to broaden their focus from examining single gene/protein kinetics to better understanding global gene/protein expression profiling and biological pathway analyses, namely Systems Biology. An ultimate goal of systems biology is to develop dynamic mathematical models of interacting biological systems capable of simulating living systems in a computer. This Glue Grant is to complement Dr. Boothman’s existing DOE grant (No. DE-FG02-06ER64186) entitled “The IGF1/IGF-1R-MAPK-Secretory Clusterin (sCLU) Pathway: Mediator of a Low Dose IR-Inducible Bystander Effect” to develop sensitive and quantitative proteomic technology that suitable for low dose radiobiology researches. An improved version of quantitative protein array platform utilizing linear Quantum dot signaling for systematically measuring protein levels and phosphorylation states for systems biology modeling is presented. The signals are amplified by a confocal laser Quantum dot scanner resulting in ~1000-fold more sensitivity than traditional Western blots and show the good linearity that is impossible for the signals of HRP-amplification. Therefore this improved protein array technology is suitable to detect weak responses of low dose radiation. Software is developed to facilitate the quantitative readout of signaling network activities. Kinetics of EGFRvIII mutant signaling was analyzed to quantify cross-talks between EGFR and other signaling pathways.

62 RADIOLOGY AND NUCLEAR MEDICINE↗

Power System Operational Impacts of Electric Vehicle Dynamic Wireless Charging

The electrification of the transportation sector poses an opportunity for reducing greenhouse gas (GHG) emissions from passenger vehicles. Electric vehicle (EV) charging through dynamic wireless power transfer (DWPT), known as roadway electrification, could shift EV demand profiles to better coincide with renewable electricity generation. However, this would be a very large new load and few studies evaluate the regional impacts of DWPT charging in a power transmission system. This paper defines methods that address dataset generation for passenger vehicle trips and models to evaluate regional impacts for this emerging technology. Household vehicle miles traveled (VMT) data form localized EV demand profiles through discrete-event simulation. This data serves as exogenous inputs for a Production Cost Model (PCM) of a synthetic transmission system based on the Electric Reliability Council of Texas's (ERCOT) network. EV charging methods are compared for both a 2018 baseline generation mixture and a high-renewable generation case incorporating 20 GW of installed solar photovoltaic (PV) capacity. The PCM employs unit commitment and economic dispatch (UC&ED) models to compare financial, environmental, and grid reliability impacts from EV charging across passenger EV adoption levels. In-transit charging could reduce grid operational costs by as much as 1.49%, with up to $13.7B saved in annual vehicle operational costs for consumers compared to gas-powered vehicles. Health impacts analysis from power plant and vehicle tailpipe emissions from this study show net health benefits increase by 40% for in-transit charging coupled with high renewable generation. Renewable resources provide an avenue for cost-effective in-transit charging with reduced emissions. The combination of dataset generation and open-source power system modeling establish a foundation for the holistic evaluation of regional DWPT impacts.

dynamic wireless power transfer↗

The outflow speed of the coma of Halley's comet

Data concerning the outflow speed of the coma of Comet Halley are studied in relation to a generalization of the coupled pure-gas-dynamic/Monte Carlo model of Combi and Smyth (1988) to include the dusty-gas dynamics of the inner coma. Measurements made by the Giotto neutral-gas spectrometer, IR water observations from the Kuiper Airborne Observatory, and Doppler radio line profiles of HCN and OH are used to examine the radial dependence of the outflow speed, the asymmetry in the outflow speed, and the overall heliocentric distance dependence of the Doppler profiles, respectively. The results suggest that the model makes it possible to understand the gross long-term behavior and radial structure of the dynamics of the cometary coma.

Combi, Michael R.↗

PLASMA INSTABILITIES IN THE CONTEXT OF CURRENT HELIUM SEDIMENTATION MODELS: DYNAMICAL IMPLICATIONS FOR THE ICM IN GALAXY CLUSTERS

Understanding whether Helium can sediment to the core of galaxy clusters is important for a number of problems in cosmology and astrophysics. All current models addressing this question are one-dimensional and do not account for the fact that magnetic fields can effectively channel ions and electrons, leading to anisotropic transport of momentum, heat, and particle diffusion in the weakly collisional intracluster medium (ICM). This anisotropy can lead to a wide variety of instabilities, which could be relevant for understanding the dynamics of heterogeneous media. In this paper, we consider the radial temperature and composition profiles as obtained from a state-of-the-art Helium sedimentation model and analyze its stability properties. We find that the associated radial profiles are unstable to different kinds of instabilities depending on the magnetic field orientation at all radii. The fastest growing modes are usually related to generalizations of the magnetothermal instability (MTI) and the heat-flux-driven buoyancy instability which operate in heterogeneous media. We find that the effect of sedimentation is to increase (decrease) the predicted growth rates in the inner (outer) cluster region. The unstable modes grow quickly compared to the sedimentation timescale. This suggests that the composition gradients as inferred from sedimentation models, which do not fully account for the anisotropic character of the weakly collisional environment, might not be very robust. Our results emphasize the subtleties involved in understanding the gas dynamics of the ICM and argue for the need of a comprehensive approach to address the issue of Helium sedimentation beyond current models.

79 ASTRONOMY AND ASTROPHYSICS↗

Simulation of collisional transport processes and the stability of planetary rings

The utility of the phase-space fluid method for the study of planetary ring dynamics is presently demonstrated through the numerical solution of a model kinetic equation for a flattened Keplerian disk. Attention is given to ringlets composed of single-sized particles, as well as to ringlets composed of two different-sized particles; in the latter case, the ringlets evolve in such a way that the lighter particles are confined by the heavier ones. The results obtained indicate that some natural process may sharpen the optical depth profile of edges even without an external forcing mechanism, and that intermediate optical depths are dynamically preferred in some cases.

Brophy, Thomas G.↗

Resolution and Dynamical Core Dependence of Atmospheric River Frequency in Global Model Simulations

This study examines the sensitivity of atmospheric river (AR) frequency simulated by a global model with different grid resolutions and dynamical cores. Analysis is performed on aquaplanet simulations using version 4 of Community Atmosphere Model (CAM4) at 240, 120, 60 and 30 km model resolutions each with the Model for Prediction Across Scales (MPAS) and High-Order Methods Modeling Environment (HOMME) dynamical cores. The frequency of AR events decreases with model resolution and the HOMME dynamical core produces more AR events than MPAS. Comparing the frequencies determined using absolute and percentile thresholds of large-scale conditions used to define an AR, model sensitivity is found to be related to the overall sensitivity of sub-tropical westerlies, atmospheric precipitable water content and profile and to a lesser extent on extra-tropical Rossby wave activity to model resolution and dynamical core. Real world simulations using MPAS at 120 km and 30 km grid resolutions also exhibit a decrease of AR frequency with increasing resolution over southern East Pacific, but there difference is smaller over northern East Pacific. This inter-hemispheric difference is related to the enhancement of convection in over the tropics with increased resolution. This anomalous convection sets off Rossby wave patterns that weaken the subtropical westerlies over southern East Pacific but have relatively little effect on those over northern East Pacific. In comparison to NCEP2 reanalysis, MPAS real world simulations are found to underestimate AR frequencies at both resolutions likely because of their climatologically drier sub-tropics and poleward shifted jets. This study highlights the important links between model climatology of large-scale conditions and extremes.

atmopheric river frequency↗

The spectroscopy of the atmosphere using far-infrared emission experiment (SAFIRE)

The goal of the SAFIRE experiment is to improve understanding of the middle-atmospher ozone distribution by conducting and analyzing global-scale measurements of important chemical, radiative and dynamical processes, including coupling among these processes and atmospheric regions. This will be accomplished by observing vertical profiles of temperature and key gases in the main chemical families. A detailed listing of SAFIRE measurements, including sepctral ranges, altitude ranges, IFOV, spatial and temporal resolution, latitude coverage and estimated precision is provided. The temperature, O3, CH4, and H2O observations will be useful for deriving and studying dynamical quantities such as geopotential height, potential vorticity, balanced winds and Eliassen-Palm fluxes. The SAFIRE observations will provide important data for study of chemistry, dynamics and transport processes. This experiment was conceived in response to a need for simultaneous measurements of odd hydrogen gases. These include gases such as OH, HO2, and atomic oxygen, which have not been observed by past satellite experiments and which will not be measured by any of teh Upper Atmosophere Reserach Satellite (UARS) experiments to be launched in 1991.

Russell, J. M., III↗

Insights into the relation between vertical cloud structure and dynamics of three polar lows: Observations from COMBLE

The vertical structure of three polar lows is described using profiling radar, lidar, and passive remote sensors deployed at a coastal site in northern Norway. The data were collected as part of the Cold-air Outbreaks in the Marine Boundary Layer Experiment (COMBLE). These data are examined in the context of satellite imagery, operational weather radar reflectivity imagery, and output from the AROME-Arctic model. A comparison to satellite images shows that AROME-Arctic captured the polar lows well. All three polar lows form in marine cold-air outbreaks and are surrounded by open-cellular convection typical of such outbreaks. Two of the lows form in a forward shear environment, and one under reverse shear. Initially, the three polar lows are comma-shaped; two of them transition to be more spirali-form at their mature stage and have mostly cloud-free warm cores. The warm cores are the result of a warm-seclusion process. All three lows have stratiform precipitation bands, marked by little cloud liquid water, and rather high surface precipitation rate. The vertical drafts and turbulence in these stratiform clouds are generally weak. In conclusion, all three lows also have convective clouds, which have stronger vertical drafts, stronger turbulence, and pockets of high liquid water content.

54 ENVIRONMENTAL SCIENCES↗

Computer modeling of the dynamics of surface tension on rotating fluids in low and microgravity environments

Time-dependent evolutions of the profile of the free surface (bubble shapes) for a cylindrical container partially filled with a Newtonian fluid of constant density, rotating about its axis of symmetry, have been studied. Numerical computations have been carried out with the following situations: (1) linear functions of spin-up and spin-down in low- and microgravity environments, (2) linear functions of increasing and decreasing gravity environments at high- and low-rotating cylinder speeds, and (3) step functions of spin-up and spin-down in a low-gravity environment.

Hung, R. J.↗

Dynamics of the young binary LMC cluster NGC 1850

BV CCD images and echelle spectra of 52 supergiants are used to examine the age and internal dynamics of the young binary LMC cluster NGC 1850. A color-magnitude diagram was constructed and found to contain three distinct populations of stars. Using star-subtracted, median filtered BV images, attempts were made to determine ellipticity parameters, BV luminosity profiles were constructed to project radii greater than 40. A power law model was applied to test for the presence of a tidal cutoff in the luminosity profile. Of the 52 stars with echelle spectra, a subset of 36 were used to study the cluster dynamics. A rotational signal in the radial velocities has been detected at the 93-percent confidence level, implying a rotation axis at a position angle of 100 +/- 40 deg. Values for the slope of the mass function were determined using mass luminosity relationships and different forms for the IMF. The current cluster age is similar to its central relaxation time.

Fischer, Philippe↗

How Well Does the Latest Anthropomorphic Test Device Mimic Human Impact Responses?

One of the goals of the NASA Occupant Protection Group is to understand the human tolerance to dynamic loading. This knowledge has to come through indirect approaches such as existing human response databases, anthropometric test devices (ATD), animal testing, post‐mortem human subjects, and models. This study investigated the biofidelity of the National Highway Traffic Safety Administration's ATD named the THOR (test device for human occupant restraint). If THOR responds comparably to humans, then it could potentially be used as a human surrogate to help validate space vehicle requirements for occupant protection. The THOR responses to frontal and spinal impacts (ranging from 8 to 12 G with rise times of 40, 70, and 100 ms) were measured and compared to human volunteer responses (95 trials in frontal and 58 in spinal) previously collected by the U. S. Air Force on the same horizontal impact accelerator. The impact acceleration profiles tested are within the expected range of multi‐purpose crew vehicle (MPCV) landing dynamics. A correlation score was calculated for each THOR to human comparison using CORA (CORrelation and Analysis) software. A two‐parameter beta distribution model fit was obtained for each dependent variable using maximum likelihood estimation. For frontal impacts, the THOR head x‐acceleration peak response correlated with the human response at 8 and 10‐G 100 ms but not 10‐G 70 ms. The phase lagged the human response. Head z‐acceleration was not correlated. Chest x‐acceleration was in phase, had a higher peak response, and was well correlated with lighter subjects (Cora = 0.8 for 46 kg vs. Cora = 0.4 for 126 kg). Head x‐displacement had a leading phase. Several subjects responded with the same peak displacement but the mean of the group was lower. The shoulder x‐displacement was in phase but had higher peaks than the human response. For spinal impacts, the THOR head x‐acceleration was not well correlated. Head and chest z‐acceleration was in phase but had a higher peak response. Chest z‐acceleration was highly correlated with heavier subjects at lower G pulses (Cora = 0.86 for 125 kg at 8 G). The human response was variable in shoulder z‐displacement but the THOR was in phase and was comparable to the mean peak response. Head xand z‐displacement was in phase but had higher peaks. Seat pan forces were well correlated, were in phase, but had a larger peak response than most subjects. The THOR does not respond to frontal and spinal impacts exactly the same way that a human does. Some responses are well matched and others are not. Understanding the strengths and weaknesses of this ATD is an important first step in determining its usefulness in occupant protection at NASA

Newby, N.↗