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At least 973 records · Page 54

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DOE OSTI2023

3′ RNA-seq is superior to standard RNA-seq in cases of sparse data but inferior at identifying toxicity pathways in a model organism

The application of RNA-sequencing has led to numerous breakthroughs related to investigating gene expression levels in complex biological systems. Among these are knowledge of how organisms, such as the vertebrate model organism zebrafish (Danio rerio), respond to toxicant exposure. Recently, the development of 3' RNA-seq has allowed for the determination of gene expression levels with a fraction of the required reads compared to standard RNA-seq. While 3' RNA-seq has many advantages, a comparison to standard RNA-seq has not been performed in the context of whole organism toxicity and sparse data. Here, we examined samples from zebrafish exposed to perfluorobutane sulfonamide (FBSA) with either 3' or standard RNA-seq to determine the advantages of each with regards to the identification of functionally enriched pathways. We found that 3' and standard RNA-seq showed specific advantages when focusing on annotated or unannotated regions of the genome. We also found that standard RNA-seq identified more differentially expressed genes (DEGs), but that this advantage disappeared under conditions of sparse data. We also found that standard RNA-seq had a significant advantage in identifying functionally enriched pathways via analysis of DEG lists but that this advantage was minimal when identifying pathways via gene set enrichment analysis of all genes. These results show that each approach has experimental conditions where they may be advantageous. Our observations can help guide others in the choice of 3' RNA-seq vs standard RNA sequencing to query gene expression levels in a range of biological systems.

3’ RNA-seq↗

NASA NTRS1977

The use of snowcovered area in runoff forecasts

Long-term snowcovered area data from aircraft and satellite observations have proven useful in reducing seasonal runoff forecast error on the Kern river watershed. Similar use of snowcovered area on the Kings river watershed produced results that were about equivalent to methods based solely on conventional data. Snowcovered area will be most effective in reducing forecast procedural error on watersheds with: (1) a substantial amount of area within a limited elevation range; (2) an erratic precipitation and/or snowpack accumulation pattern not strongly related to elevation; and (3) poor coverage by precipitation stations or snow courses restricting adequate indexing of water supply conditions. When satellite data acquisition and delivery problems are resolved, the derived snowcover information should provide a means for enhancing operational streamflow forecasts for areas that depend primarily on snowmelt for their water supply.

Rango, A.↗

NASA NTRS1999

Directional Solidification of Pure Succinonitrile and a Succinonitrile-Acetone Alloy

An experimental study of the horizontal Bridgman growth of pure succinonitrile (SCN) and of a succinonitrile-1.0 mol.% acetone alloy (SCN-1.0 mol.% ACE) has been performed. Experiments involving both a stationary thermal field (no-growth case) and a translating thermal field (growth case) were conducted. Growth rates of 2 and 40 micrometers/s were investigated. For the pure SCN experiments, the velocity field in the melt was estimated using video images of seed particles in the melt. Observations of the seed particles indicate that a primary longitudinal convective cell is formed. The maximum velocity of two different particles which traveled along similar paths was the same and equal to 1.49 +/- 0.01 mm/s. The general accuracy of velocity measurements is estimated to be +/- 0.08 mm/s, though the data shows consistency to within +/- 0.02 mm/s. The shape of the solid/liquid interface was also quantitatively determined. The solid/liquid interface was stable (non-dendritic and non-cellular) but not flat; rather it was significantly distorted by the influence of convection in (he melt and, for the growth case, by the moving temperature boundary conditions along the ampoule. It was found that the interface shape and position were highly dependent on the alignment of the ampoule in the apparatus. Consequently, the ampoule was carefully aligned for all experiments. The values for front location agree with those determined in previous experiments. For the alloy experiments, the solid/liquid interface was determined to be unstable at growth rates greater than 2.8 micrometers/s, but stable for the cases of no-growth and growth at 2 micrometers/s. When compared to the shape of the pure SCN interface, the alloy interface forms closer to the cold zone, indicating that the melting temperature decreased due to the alloying element. Extensive temperature measurements were performed on the outside of the ampoule containing pure SCN. The resulting thermal profiles are presented in detail in the results section. It is intended that the interface shape, thermal boundary condition and velocity data presented in this paper be used to test numerical simulations.

Simpson, James E.↗

NASA NTRS2000

Directional Solidification of Pure Succinonitrile and a Succinonitrile-Acetone Alloy

An experimental study of the horizontal Bridgman growth of pure succinonitrile (SCN) and of a succinonitrile-1.0 mol% acetone alloy (SCN-1.0 mol.% ACE) has been performed. Experiments involving both a stationary thermal field (no-growth case) and a translating thermal field (growth case) were conducted. Growth rates of 2 and 40 micrometers/sec were investigated. For the pure SCN experiments, the velocity field in the melt was estimated using video images of seed particles in the melt. Observations of the seed particles indicate that a primary longitudinal convective cell is formed. The maximum velocity of two different particles which traveled along similar paths was the same and equal to 1.49 +/- 0.01 mm/s. The general accuracy of velocity measurements is estimated to be +/-0.08 mm/s, though the data shows consistency to within +/- 0.02 mm/s. The shape of the solid/liquid interface was also quantitatively determined. The solid/liquid interface was stable (non-dendritic and non-cellular) but not flat: rather it was significantly distorted by the influence of connection in the melt and, for the growth case, by the moving temperature boundary conditions along the ampoule. It was found that the interface shape and position were highly dependent on the alignment of the ampoule in the apparatus. Consequently, the ampoule was carefully aligned for all experiments. The values for front location agree with those determined in previous experiments. For the alloy experiments, the solid/liquid interface was determined to be unstable at growth rates greater than 2.8 micrometers/sec, but stable for the cases of no-growth and growth at 2 micrometers/sec. When compared to the shape of the pure SCN interface, the alloy interface forms closer to the cold zone, indicating that the melting temperature decreased due to the alloying element. Extensive temperature measurements were performed on the outside of the ampoule containing pure SCN. The resulting thermal profiles are presented in detail in the results section. It is intended that the interface shape, thermal boundary condition, and velocity data presented in this paper be used to test numerical simulations.

Simpson, James E.↗

NASA NTRS2005

Development of a Modeling Framework to Support Control Investigations of Sailcraft Missions A First Cut: ABLE Sailcraft Dynamics Model

Solar Sailcraft, the stuff of dreams of the H.G. Wells generation, is now a rapidly maturing reality. The promise of unlimited propulsive power by harnessing stellar radiation is close to realization. Currently, efforts are underway to build, prototype and test two configurations. These sails are designed to meet a 20m sail requirement, under guidance of the In-Space Propulsion (ISP) technology program office at MSFC. While these sails will not fly , they are the first steps in improving our understanding of the processes and phenomena at work. As part of the New Millennium Program (NMP) the ST9 technology validation mission hopes to launch and fly a solar sail by 2010 or sooner. Though the Solar Sail community has been studying and validating various concepts over two decades, it was not until recent breakthroughs in structural and material technology, has made possible to build sails that could be launched. With real sails that can be tested (albeit under earth conditions), the real task of engineering a viable spacecraft has finally commenced. Since it is not possible to accurately or practically recreate the actual operating conditions of the sailcraft (zero-G, vacuum and extremely low temperatures), much of the work has focused on developing accurate models that can be used to predict behavior in space, and for sails that are 6-10 times the size of currently existing sails. Since these models can be validated only with real test data under "earth" conditions, the process of modeling and the identification of uncertainty due to model assumptions and scope need to be closely considered. Sailcraft models that exist currently, are primarily focused on detailed physical representations at the component level, these are intended to support prototyping efforts. System level models that cut across different sail configurations and control concepts while maintaining a consistent approach are non-existent. Much effort has been focused on the areas of thrust performance, solar radiation prediction, and sail membrane behavior vis-a-vis their reflective geometry, such as wrinkling/folding/furling as it pertains to thrust prediction. A parallel effort has been conducted on developing usable models for developing attitude control systems (ACS), for different sail configurations in different regimes. There has been very little by way of a system wide exploration of the impact of the various control schemes, thrust prediction models for different sail configurations being considered.

Sarathy, Sriprakash↗

NASA NTRS1987

Microwave dielectric behavior of vegetation material

The microwave dielectric behavior of vegetation was examined through the development of theoretical models involving dielectric dispersion by both bound and free water and supported by extensive dielectric measurements conducted over a wide range of conditions. The experimental data were acquired using an open-ended coaxial probe that was developed for sensing the dielectric constant of thin layers of materials, such as leaves, from measurements of the complex reflection coefficient using a network analyzer. The probe system was successfully used to record the spectral variation of the dielectric constant over a wide frequency range extending from 0.5 to 20.4 GHz at numerous temperatures between -40 to +40 C. The vegetation samples were measured over a wide range of moisture conditions. To model the dielectric spectrum of the bound water component of the water included in vegetation, dielectric measurements were made for several sucrose-water solutions as analogs for the situation in vegetation. The results were used in conjunction with the experimental data for leaves to determine some of the constant coefficients in the theoretical models. Two models, both of which provide good fit to the data, are proposed.

Elrayes, Mohamed A.↗

NASA NTRS1990

Three-Dimensional Cavity Flow Fields at Subsonic and Transonic Speeds

An experimental investigation was conducted to expand the data base and knowledge of flow fields in cavities over the subsonic and transonic speed regimes. A rectangular, 3-D cavity was tested over a Mach number range from 0.30 to 0.95 and at Reynolds numbers per foot from 1 x 10 to the 6th power to 4.2 x 10 to the 6th power. Two sizes of cavities were tested with length-to-height ratios (l/h) of 4.4 and 11.7 and with rectangular and nonrectangular cross-sections. Extensive static pressure data on the model walls were obtained and a complete tabulation of the data are presented. The boundary layer approaching the cavity was turbulent and the thickness was measured with a total pressure rake. The static pressure measurements obtained with the deep cavity configuration (l/h = 4.4) at Reynolds numbers greater than 3.0 x 10 to the 6th power per foot showed large fluctuations during the data sampling time. For the deep cavity, at lower Reynolds numbers, and for all conditions tested with the shallow cavity, the data showed much less unsteadiness. Though mean static pressure distributions have been used in past cavity analysis at transonic free stream conditions, the data presented here indicates that it is necessary to consider the instantaneous pressure distributions. The data also indicated that the shallow cavity static pressure measurements were sensitive to the thickness of the boundary layer entering the cavity.

Plentovich, E. B.↗

DOE OSTI2022

SOWFA Large-Eddy Simulation of a Diurnal Cycle at the SWiFT Site

These are large-eddy simulation (LES) data output from the Simulator for Wind Farm Applications (SOWFA) with internal mesoscale-to-microscale coupling. A diurnal cycle was simulated over the Scaled Wind Farm Technology (SWIFT) facility near Lubbock, Texas, from 2013-11-08 12:00:00 UTC to 2013-11-09 12:00:00 UTC. Indirect profile assimilation was used to enforce nonstationary mesoscale conditions. Mesoscale forcing data were extracted from WRF numerical weather prediction outputs or derived from observations at SWiFT.

17 WIND ENERGY↗

NASA NTRSDate not supplied

Machine Learning Methods for Estimating Propeller Source Noise Spheres

In this work, several neural network function approximations are compared for inter- polating, storing, and sampling acoustic source spheres with applications to propeller noise estimation. These methods are compared using an acoustic model of the three bladed GL-10 propeller at different flight conditions, with training data generated using NASA’s ANOPP-PAS module. The source spheres used to train the networks capture the tonal propeller noise due to both the blade thickness and loading. This tonal noise prediction method allows the vehicle noise to be estimated for auralization and acoustic control. Three radial basis function neural network architectures are compared in this work. The first two networks directly estimate the parameters of the source sphere at different flight conditions but differ in the number of layers used. The third network estimates the parameters of the source sphere using a weighted combination of spherical basis functions. These networks are trained on numerically generated source spheres, with operating points given in terms of the propeller rotation rate, freestream speed, and propeller angle of attack. The performance of the neural network is determined using a validation dataset of withheld data points. This performance is quantified in terms of the approximation error, training time, and sample time. The third network, which estimates the weights of the spherical basis functions, performs the best in both average and maximum approximation errors in all cases. This network’s worst case performance is 5.6 % relative dif- ference of a model parameter associated with acoustic pressure. The direct estimation network with a single layer has the worst approximation error in all cases. Additionally, the spherically defined network has the slowest sample time at 0.05 seconds per thousand points. Both direct estimation methods produce a thousand sample points in approximately 0.001 seconds.

Acoustics↗

NASA NTRS1974

Hypersonic chemically reacting viscous shock layers over sphere-cones and cylinder-wedges

Hypersonic, nonequilibrium viscous flow over nonanalytic blunt bodies is considered. The equations which govern the viscous shock-layer flow are presented and the method by which the equations are solved is discussed. The predictions of the present finite-difference method are compared with other numerical predictions as well as with experimental data. Three flow conditions are considered; the experimental, wind tunnel conditions of Pappas and Lee for a 7.5 deg sphere-cone at Mach 13 and two cases considered by Kang and Dunn, a 9 deg sphere-cone at 233,000 ft and a 20 deg sphere-cone at 280 and 310 Kft. The predictions of the present method agreed well with the experimental heat-transfer data, but substantial differences were found between the present predictions and the more approximate predictions of Kang and Dunn for heat-transfer distributions and temperature profiles.

Miner, E. W.↗

NASA NTRS1994

Stellar activity: Astrophysics relevant to global change

FRESIP will obtain a great deal of data on stellar activity and flares on F, G and K dwarfs. Rotation periods, flare distributions and possibly stellar cycles will emerge. This apparently curiosity-driven research actually has implications for our understanding of global climate change. Significant climate change during the seventeenth-century Maunder Minimum is thought to be related to a change in the solar condition. Recently acquired data from the Greenland Ice-core Project suggest that far greater climate changes on decade time scales may have occurred during the previous interglacial. It is possible that a yet more drastic change in state of the Sun was responsible. We have no relevant solar data, but can begin to explore this possibility by observing an ensemble of solar-like stars.

Haisch, Bernhard M.↗

NASA NTRS1976

Compensated control loops for a 30-cm ion thruster

The vaporizer dynamic control characteristics of a 30-cm diameter mercury ion thruster were determined by operating the thruster in an open loop steady state mode and then introducing a small sinusoidal signal on the main, cathode, or neutralizer vaporizer current and observing the response of the beam current, discharge voltage, and neutralizer keeper voltage, respectively. This was done over a range of frequencies and operating conditions. From these data, Bode plots for gain and phase were made and mathematical models were obtained. The Bode plots and mathematical models were analyzed for stability and appropriate compensation networks determined. The compensated control loops were incorporated into a power processor and operated with a thruster. The time responses of the compensated loops to changes in set points and recovery from arc conditions are presented.

Robson, R. R.↗

NASA NTRS1976

Compensated control loops for a 30-cm ion thruster

Robson, R. R.↗

NASA NTRS1982

An improved switching converter model

The nonlinear modeling and analysis of dc-dc converters in the continuous mode and discontinuous mode was done by averaging and discrete sampling techniques. A model was developed by combining these two techniques. This model, the discrete average model, accurately predicts the envelope of the output voltage and is easy to implement in circuit and state variable forms. The proposed model is shown to be dependent on the type of duty cycle control. The proper selection of the power stage model, between average and discrete average, is largely a function of the error processor in the feedback loop. The accuracy of the measurement data taken by a conventional technique is affected by the conditions at which the data is collected.

Shortt, D. J.↗

NASA NTRS1986

Electrocrystallization in microgravity

Electrocrystallization under microgravity conditions is proposed as a potential method of crystallization that would be almost completely free of fluid convection. Such crystallization may result in purer, more perfect, and larger crystals than is possible under normal gravity conditions. Observations made and data collected during the crystallization process under convection-free conditions should add to our knowledge of the crystallization process. The proposed method would allow easy comparison of crystals growth in space with those grown under normal gravity conditions. Nine types of electrocrystallization are presented: an example of each is discussed. Electrocrystallization is compared with the compartmental crystallization method used by 3M Corporation in recent shuttle experiments.

May, C. E.↗

NASA NTRS2000

Implementation of a Compressor Face Boundary Condition Based on Small Disturbances

A compressor-face boundary condition that models the unsteady interactions of acoustic and convective velocity disturbances with a compressor has been implemented into a three-dimensional computational fluid dynamics code. Locally one-dimensional characteristics along with a small-disturbance model are used to compute the acoustic response as a function of the local stagger angle and the strength and direction of the disturbance. Simulations of the inviscid flow in a straight duct, a duct coupled to a compressor, and a supersonic inlet demonstrate the behavior of the boundary condition in relation to existing boundary conditions. Comparisons with experimental data show a large improvement in accuracy over existing boundary conditions in the ability to predict the reflected disturbance from the interaction of an acoustic disturbance with a compressor.

Slater, John W.↗

NASA NTRS2011

CFD Validation with Experiment and Verification with Physics of a Propellant Damping Device

This paper will document our effort in validating a coupled fluid-structure interaction CFD tool in predicting a damping device performance in the laboratory condition. Consistently good comparisons of "blind" CFD predictions against experimental data under various operation conditions, design parameters, and cryogenic environment will be presented. The power of the coupled CFD-structures interaction code in explaining some unexpected phenomena of the device observed during the technology development will be illustrated. The evolution of the damper device design inside the LOX tank will be used to demonstrate the contribution of the tool in understanding, optimization and implementation of LOX damper in Ares I vehicle. It is due to the present validation effort, the LOX damper technology has matured to TRL 5. The present effort has also contributed to the transition of the technology from an early conceptual observation to the baseline design of thrust oscillation mitigation for the Ares I within a 10 month period.

Yang, H. Q.↗

NASA NTRSDate not supplied

Assessments of Physiology And Cognition in Hybrid-reality Environments (APACHE) – Physical Workload Approximation

The Human Physiology, Performance, Protection & Operations Laboratory (H-3PO) at NASA Johnson Space Center (JSC) is developing a hybrid reality exploration surface analog, “Assessments of Physiology and Cognition in Hybrid-reality Environments” (APACHE). The goal of APACHE is to create a planetary extravehicular activity (EVA) simulation environment that provides a representative physical and cognitive workload approximation using a combination of virtual reality (VR), physical reality, and hybrid reality (HR) techniques. To develop and characterize the physical workload approximation within the APACHE environment, a two-part approach was implemented. In part 1, baseline physical work load during ambulation within APACHE was evaluated and compared with that in other planetary EVA analog environments and with existing data sets from Apollo planetary EVAs and reduced gravity testing of prototype planetary spacesuits. For this evaluation, 10 subjects were asked to ambulate in three surface analog environments: a passive treadmill in APACHE, natural terrain in an outdoor field environment, and a standard motorized treadmill. Subjects’ heart rate and metabolic rate (VO2/VCO2) were measured and compared among the different test conditions and existing data sets. Gait parameters were also collected to compare with suited mechanics and to understand the role of gait kinematics in physical workload. In part 2, the aim is to evaluate the addition of a custom weighted body suit to the aforementioned surface analog environments and the ability to titrate the suit configuration to provide the best possible physical workload approximation for simulation of lunar and Martian EVAs.

Alex Baughman↗