Engineering Papers⌕ Search

SEARCH · Engineering Papers

Results for “cluster finding”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 973 records · Page 54
All sourcesNASA NTRSDOE OSTI
DOE OSTI2025

Unraveling the Determinant Mechanisms in Flow-Mediated Crystal Growth and Phase Behaviors

To uncover the critical mechanisms responsible for mesoscopic level development during flow-mediated crystal growth, we develop a semi-two-way hydrodynamic coupled structural phase-field crystal formalism (HXPFC-s2). The new formalism, inspired by previous attempts at coupling hydrodynamic and phase-field crystal (PFC) equations, allows for studying mesoscopic flow-mediated crystallization at diffusive timescales pertinent to industrial applications. Unlike previous efforts, the devised coupling to the structural PFC (XPFC) equations allows generalization to more complex crystal structures through explicit parameterization of the direct correlation function (DCF). Utilizing the HXPFC-s2 formalism, we seek to uncover the determinant physical mechanisms in crystallization under simple shear flows by comparing temperature-driven crystallization to flow-mediated crystallization under varying flow-strengths. Parallels and deviations of under-cooling and flow-strength effects on crystal growth are drawn using the crystal cluster-size and system ordering time evolutions. In doing so, we identify scaling behaviors with a Peclet-like number, Pe∼, a critical Peclet-like number, Pe∼*, and flow-field-crystal plane-dependent interactions. Our findings may be relevant for controlling crystal growth and phase behaviors in flow applications.

Willis, L. Connor (ORCID:0009000961321848)↗
DOE OSTI2024

Structural mechanisms for VMAT2 inhibition by tetrabenazine

The vesicular monoamine transporter 2 (VMAT2) is a proton-dependent antiporter responsible for loading monoamine neurotransmitters into synaptic vesicles. Dysregulation of VMAT2 can lead to several neuropsychiatric disorders including Parkinson’s disease and schizophrenia. Furthermore, drugs such as amphetamine and MDMA are known to act on VMAT2, exemplifying its role in the mechanisms of actions for drugs of abuse. Despite VMAT2’s importance, there remains a critical lack of mechanistic understanding, largely driven by a lack of structural information. Here, we report a 3.1 Å resolution cryo-electron microscopy (cryo-EM) structure of VMAT2 complexed with tetrabenazine (TBZ), a non-competitive inhibitor used in the treatment of Huntington’s chorea. We find TBZ interacts with residues in a central binding site, locking VMAT2 in an occluded conformation and providing a mechanistic basis for non-competitive inhibition. We further identify residues critical for cytosolic and lumenal gating, including a cluster of hydrophobic residues which are involved in a lumenal gating strategy. Our structure also highlights three distinct polar networks that may determine VMAT2 conformational dynamics and play a role in proton transduction. The structure elucidates mechanisms of VMAT2 inhibition and transport, providing insights into VMAT2 architecture, function, and the design of small-molecule therapeutics.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

Late growth of early-type galaxies in low-z massive clusters

ABSTRACT We study a sample of 936 early-type galaxies (ETGs) located in 48 low-z regular galaxy clusters with M200 ≥ 1014 M⊙ at z < 0.1. We examine variations in the concentration index, radius, and colour gradient of ETGs as a function of their stellar mass and loci in the projected phase space (PPS) of the clusters. We aim to understand the environmental influence on the growth of ETGs according to the time since infall into their host clusters. Our analysis indicates a significant change in the behaviour of the concentration index C and colour gradient around $M_{\ast } \approx 2\times 10^{11} ~M_\odot \equiv \tilde{M}_{\ast }$. Objects less massive than $\tilde{M}_{\ast }$ present a slight growth of C with M*, with negative and approximately constant colour gradients in all regions of the PPS. Objects more massive than $\tilde{M}_{\ast }$ present a slight decrease of C with M*, with colour gradients becoming less negative and approaching zero. We also find that objects more massive than $\tilde{M}_{\ast }$, in all PPS regions, have smaller R90 for a given R50, suggesting a smaller external growth in these objects or even a shrinkage possibly due to tidal stripping. Finally, we estimate different dark matter fractions for galaxies in different regions of the PPS, with the ancient satellites having the largest fractions, fDM ≈ 65 per cent. These results favour a scenario where cluster ETGs experience environmental influence the longer they remain and the deeper into the gravitational potential they lie, indicating a combination of tidal stripping + harassment, which predominate during infall, followed by mergers + feedback effects affecting the late growth of ancient satellites and BCGs.

Astronomy & Astrophysics↗
DOE OSTI2022

Cluster environment quenches the star formation of low-mass satellite galaxies from the inside-out

ABSTRACT Environment plays a critical role in the star formation history of galaxies. Tidal and hydrodynamical stripping, prominent in cluster environment, can remove the peripheral gas of galaxies and star formation may thus be environmentally suppressed from the outside-in. We revisit the environmental dependence of the radial gradient of specific star formation rate (sSFR) profile. We probe the radial gradient by using the archival spectral indices D4000n and HδA measured from SDSS fibre spectra, to indicate central sSFR and the total sSFR from fitting the spectral energy distribution. Despite the low spatial resolution, the wealth of SDSS data allows to disentangle the dependences on stellar mass, sSFR, and environment. We find that low-mass satellite galaxies in the mass range $9\lt \mathrm{log}\, \mathcal {M}_{\star }/\mathcal {M}_{\odot }\lt 9.8$ on average quench in more inside-out pattern compared to isolated galaxies matched in mass, sSFR, and fibre coverage. This environmental effect is particularly strong for galaxies below the star formation main sequence, and peaks for those in the core of massive clusters where the phase-space diagram reveals clear links between the inside-out quenching and orbital properties. Our results suggest that both tidal and hydrodynamical interactions in cluster environment suppress the star formation of satellites mainly from the inside-out. As accreted gas of low angular momentum from hot gas haloes is an important source for replenishing central gas reservoir, we discuss how gas stripping in clusters may lead to starvation and cause inside-out quenching when the outer star-forming discs are not significantly affected.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2022

The physical origin of dark energy constraints from rubin observatory and CMB-S4 lensing tomography

ABSTRACT We seek to clarify the origin of constraints on the dark energy equation of state parameter from CMB lensing tomography, that is the combination of galaxy clustering and the cross-correlation of galaxies with CMB lensing in a number of redshift bins. We focus on the analytic understanding of the origin of the constraints. Dark energy information in these data arises from the influence of three primary relationships: distance as a function of redshift (geometry), the amplitude of the power spectrum as a function of redshift (growth), and the power spectrum as a function of wavenumber (shape). We find that the effects from geometry and growth play a significant role and partially cancel each other out, while the shape effect is unimportant. We also show that Dark Energy Task Force figure of merit forecasts from the combination of LSST galaxies and CMB-S4 lensing are comparable to the forecasts from cosmic shear in the absence of the CMB lensing map, thus providing an important independent check. Compared to the forecasts with the LSST galaxies alone, combining CMB lensing and LSST clustering information increases the FoM by roughly a factor of 3–4 in the optimistic scenario where systematics are fully under control. We caution that achieving these forecasts will likely require a full analysis of higher-order biasing, photometric redshift uncertainties, and stringent control of other systematic limitations, which are outside the scope of this work, whose primary purpose is to elucidate the physical origin of the constraints.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2021

Spectroscopic quantification of projection effects in the SDSS redMaPPer galaxy cluster catalogue

ABSTRACT Projection effects, whereby galaxies along the line of sight to a galaxy cluster are mistakenly associated with the cluster halo, present a significant challenge for optical cluster cosmology. We use statistically representative spectral coverage of luminous galaxies to investigate how projection effects impact the low-redshift limit of the Sloan Digital Sky Survey (SDSS) redMaPPer galaxy cluster catalogue. Spectroscopic redshifts enable us to differentiate true cluster members from false positives and determine the fraction of candidate cluster members viewed in projection. Our main results can be summarized as follows: first, we show that a simple double-Gaussian model can be used to describe the distribution of line-of-sight velocities in the redMaPPer sample; secondly, the incidence of projection effects is substantial, accounting for ∼16 per cent of the weighted richness for the lowest richness objects; thirdly, projection effects are a strong function of richness, with the contribution in the highest richness bin being several times smaller than for low-richness objects; fourthly, our measurement has a similar amplitude to state-of-the-art models, but finds a steeper dependence of projection effects on richness than these models; and fifthly, the slope of the observed velocity dispersion–richness relation, corrected for projection effects, implies an approximately linear relationship between the true, three-dimensional halo mass and three-dimensional richness. Our results provide a robust, empirical description of the impact of projection effects on the SDSS redMaPPer cluster sample and exemplify the synergies between optical imaging and spectroscopic data for studies of galaxy cluster astrophysics and cosmology.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2021

Healing of nanocracks by collision cascades in nickel

We use molecular dynamics simulations to investigate the interaction between collision cascades and pre-existing nano-cracks in nickel (Ni). We find that collision cascades cause the cracks to heal whenever a cascade initiates a thermal spike whose core overlaps with the crack. Moreover, crack healing affects the distribution of radiation-induced defects generated during a collision cascade: defect clusters, such as dislocations and stacking fault tetrahedra, dominate in the presence of crack healing, while isolated point defects dominate in its absence. Furthermore, this work indicates that irradiation may reduce the number of pre-existing crack-like flaws in metallic components, potentially improving their mechanical resilience.

36 MATERIALS SCIENCE↗
DOE OSTI2025

Ab initio calculations of scattering and fusion reactions

We review recent advancements achieved within the ab initio no-core shell model with continuum (NCSMC), a unified first-principle (or, ab initio) approach to nuclear bound and continuum states. We highlight its application to reactions of astrophysical interests, including the 7 Be(p, γ) 8 B solar fusion and α-α scattering, and to the structure of the exotic 12 Be nucleus. Furthermore, our findings provide a solid foundation for integrating ab initio calculations with experimental measurements, allowing for more precise evaluations of key thermonuclear reaction rates at astrophysical energies, and offer new insights into the factors that contribute to the emergence of clustering.

Quaglioni, Sofia [Lawrence Livermore National Labo↗
DOE OSTI2022

Discovery of peculiar radio morphologies with ASKAP using unsupervised machine learning

Abstract We present a set of peculiar radio sources detected using an unsupervised machine learning method. We use data from the Australian Square Kilometre Array Pathfinder (ASKAP) telescope to train a self-organizing map (SOM). The radio maps from three ASKAP surveys, Evolutionary Map of Universe pilot survey (EMU-PS), Deep Investigation of Neutral Gas Origins pilot survey (DINGO), and Survey With ASKAP of GAMA-09 + X-ray (SWAG-X), are used to search for the rarest or unknown radio morphologies. We use an extension of the SOM algorithm that implements rotation and flipping invariance on astronomical sources. The SOM is trained using the images of all ‘complex’ radio sources in the EMU-PS which we define as all sources catalogued as ‘multi-component’. The trained SOM is then used to estimate a similarity score for complex sources in all surveys. We select 0.5% of the sources that are most complex according to the similarity metric and visually examine them to find the rarest radio morphologies. Among these, we find two new odd radio circle (ORC) candidates and five other peculiar morphologies. We discuss multiwavelength properties and the optical/infrared counterparts of selected peculiar sources. In addition, we present examples of conventional radio morphologies including: diffuse emission from galaxy clusters, and resolved, bent-tailed, and FR-I and FR-II type radio galaxies. We discuss the overdense environment that may be the reason behind the circular shape of ORC candidates.

Astronomy & Astrophysics↗
DOE OSTI2023

Applying Magnetic Curvature to MMS Data to Identify Thin Current Sheets Relative to Tail Reconnection

Thin current sheets (TCSs) have been postulated to be a necessary precondition for reconnection onset. Magnetic reconnection X-lines in the magnetotail have been observed to be more common duskward of midnight. We take advantage of the MMS tetrahedral formation during the 2017–2020 MMS tail seasons to calculate the thickness of the cross-tail neutral sheet relative to ion gyroradius. While a similar technique was applied to Cluster data, current sheet thickness over a broader range of radial distances has not been robustly explored before this study. We compare our analysis to recent theories regarding mechanisms of tail current sheet thinning and to recent simulations. We find MMS spent more than twice as long in ion-scale TCSs in the pre-midnight sector than post-midnight, despite nearly even plasma sheet dwell time. The dawn-dusk asymmetry in the distribution of Ion Diffusion Regions, as previously reported in relation to regions of TCSs, is also analyzed.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2021

Analysis of intraspecies diversity reveals a subset of highly variable plant immune receptors and predicts their binding sites

The evolution of recognition specificities by the immune system depends on the generation of receptor diversity and on connecting the binding of new antigens with the initiation of downstream signaling. In plant immunity, the innate Nucleotide-Binding Leucine-Rich Repeat (NLR) receptor family enables antigen binding and immune signaling. In this study, we surveyed the NLR complements of 62 ecotypes of Arabidopsis thaliana and 54 lines of Brachypodium distachyon and identified a limited number of NLR subfamilies that show high allelic diversity. We show that the predicted specificity-determining residues cluster on the surfaces of Leucine-Rich Repeat domains, but the locations of the clusters vary among NLR subfamilies. By comparing NLR phylogeny, allelic diversity, and known functions of the Arabidopsis NLRs, we formulate a hypothesis for the emergence of direct and indirect pathogen-sensing receptors and of the autoimmune NLRs. These findings reveal the recurring patterns of evolution of innate immunity and can inform NLR engineering efforts.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2022

Variational approaches to constructing the many-body nuclear ground state for quantum computing

Here, we explore the preparation of specific nuclear states on gate-based quantum hardware using variational algorithms. Large-scale classical diagonalizations of the nuclear shell model have reached sizes of 10 9 –10 10 basis states but are still severely limited by computational resources. Quantum computing can, in principle, solve such systems exactly with exponentially fewer resources than classical computing. Exact solutions for large systems require many qubits and large gate depth, but variational approaches can effectively limit the required gate depth. We use the unitary coupled cluster approach to construct approximations of the ground-state vectors, later to be used in dynamics calculations. The testing ground is the phenomenological shell model space, which allows us to mimic the complexity of the internucleon interactions. We find that often one needs to minimize over a large number of parameters, using a large number of entanglements that makes the application on existing hardware challenging. Prospects for rapid improvements with more capable hardware are, however, very encouraging.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
DOE OSTI2021

Non-Gaussian estimates of tensions in cosmological parameters

We discuss how to efficiently and reliably estimate the level of agreement and disagreement on parameter determinations from different experiments, fully taking into account non-Gaussianities in the parameter posteriors. We develop two families of scalable algorithms that allow us to perform this type of calculations in increasing number of dimensions and for different levels of tensions. One family of algorithms rely on kernel density estimates of posterior distributions while the other relies on machine learning modeling of the posterior distribution with normalizing flows. We showcase their effectiveness and accuracy with a set of benchmark examples and find both methods agree with each other and the true tension within 0.5σ in difficult cases and generally to 0.2σ or better. This allows us to study the level of internal agreement between different measurements of the clustering of cosmological structures from the Dark Energy Survey and their agreement with measurements of the Cosmic Microwave Background from the Planck satellite.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2023

The status of the galactic center gamma-ray excess

The Galactic Center Gamma-Ray Excess has a spectrum, angular distribution, and overall intensity that agree remarkably well with that expected from annihilating dark matter particles in the form of a m_X \sim m X ∼ 50 GeV thermal relic. Previous claims that these photons are clustered on small angular scales or trace the distribution of known stellar populations once appeared to favor interpretations in which this signal originates from a large population of unresolved millisecond pulsars. More recent work, however, has overturned these conclusions, finding that the observed gamma-ray excess does not contain discernible small scale power, and is distributed with approximate spherical symmetry, not tracing any known stellar populations. In light of these results, it now appears significantly more likely that the Galactic Center Gamma-Ray Excess is produced by annihilating dark matter.

Hooper, Dan↗
DOE OSTI2022

The Status of the Galactic Center Gamma-Ray Excess

The Galactic Center Gamma-Ray Excess has a spectrum, angular distribution, and overall intensity that agree remarkably well with that expected from annihilating dark matter particles in the form of a $m_X \sim 50 \, {\rm GeV}$ thermal relic. Previous claims that these photons are clustered on small angular scales or trace the distribution of known stellar populations once appeared to favor interpretations in which this signal originates from a large population of unresolved millisecond pulsars. More recent work, however, has overturned these conclusions, finding that the observed gamma-ray excess does {\it not} contain discernible small scale power, and is distributed with approximate spherical symmetry, not tracing any known stellar populations. In light of these results, it now appears significantly more likely that the Galactic Center Gamma-Ray Excess is produced by annihilating dark matter.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2022

The Status of the Galactic Center Gamma-Ray Excess

The Galactic Center Gamma-Ray Excess has a spectrum, angular distribution, and overall intensity that agree remarkably well with that expected from annihilating dark matter particles in the form of a $m_X \sim 50 \, {\rm GeV}$ thermal relic. Previous claims that these photons are clustered on small angular scales or trace the distribution of known stellar populations once appeared to favor interpretations in which this signal originates from a large population of unresolved millisecond pulsars. More recent work, however, has overturned these conclusions, finding that the observed gamma-ray excess does {\it not} contain discernible small scale power, and is distributed with approximate spherical symmetry, not tracing any known stellar populations. In light of these results, it now appears significantly more likely that the Galactic Center Gamma-Ray Excess is produced by annihilating dark matter.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2025

Cosmological Constraints from Full-Scale Clustering and Galaxy-Galaxy Lensing with DESI DR1

We present constraints on cosmic structure growth from the analysis of galaxy clustering and galaxy-galaxy lensing with galaxies from the Dark Energy Spectroscopic Instrument (DESI) Data Release 1. We analyze four samples drawn from the Bright Galaxy Survey (BGS) and the Luminous Red Galaxy (LRG) target classes. Projected galaxy clustering measurements from DESI are supplemented with lensing measurements from the Dark Energy Survey (DES), the Kilo-Degree Survey (KiDS), and the Hyper Suprime-Cam (HSC) survey around the same targets. Our method relies on a simulation-based modeling framework using the AbacusSummit simulations and a complex halo occupation distribution model that incorporates assembly bias. We analyze scales down to $0.4 \, h^{-1} \, \mathrm{Mpc}$ for clustering and $2.5 \, h^{-1} \, \mathrm{Mpc}$ for lensing, leading to stringent constraints on $S_8 = σ_8 \sqrt{Ω_\mathrm{m} / 0.3}$ and $Ω_\mathrm{m}$ when fixing other cosmological parameters to those preferred by the CMB. We find $S_8 = 0.794 \pm 0.023$ and $Ω_\mathrm{m} = 0.295 \pm 0.012$ when using lensing measurements from DES and KiDS. Similarly, for HSC, we find $S_8 = 0.793 \pm 0.017$ and $Ω_\mathrm{m} = 0.303 \pm 0.010$ when assuming the best-fit photometric redshift offset suggested by the HSC collaboration. Overall, our results are in good agreement with other results in the literature while continuing to highlight the constraining power of non-linear scales.

Lange, Johannes U. [American U.] (ORCID:0000000224↗
DOE OSTI2026

Benchmarking quantum trial wavefunctions for phaseless auxiliary-field quantum Monte Carlo

The phaseless auxiliary-field quantum Monte Carlo (ph-AFQMC) method is a stochastic imaginary-time projection technique for computing ground-state properties of strongly correlated quantum systems, with accuracy that depends critically on the choice of trial wavefunction. Here, we investigate ph-AFQMC with trial states prepared using parameterized quantum circuits. In this work, we present a comprehensive benchmarking study of quantum trial wavefunctions spanning unitary coupled-cluster, Hamiltonian-informed, Jastrow-inspired, and adaptively constructed ansatze. The benchmarking evaluates accuracy, expressibility, and scalability of these ansatze within the QC-AFQMC framework. We test these ansatze on linear hydrogen chains under bond stretching and find that several ansatz families produce chemically accurate ph-AFQMC energies across the dissociation curve. We have performed simulations using the CUDA-Q quantum development platform on the GPU partition of the Perlmutter supercomputer. When comparing ansatze at similar numbers of variational parameters, we find that different ansatz families yield comparable ph-AFQMC results despite exhibiting substantially different variational energies, optimization costs, and circuit depths. Our results indicate that the variational energy of an ansatz is not always a reliable indicator of its quality for ph-AFQMC and reveal instances of over-parameterization. In the strongly correlated regime, trial wavefunctions obtained from adaptive ansatze, exemplified here by ADAPT-VQE with the UCCSD operator pool, can outperform their fixed-ansatz counterparts (UCCSD) in terms of projected energies while using substantially more compact circuits, providing a flexible route to optimize quantum resources within the ph-AFQMC framework.

Rofougaran, Rod [LBNL, Berkeley; Columbia U.; PNL,↗