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At least 973 records · Page 54

Multi-technique characterization of iron reduction by an Antarctic Shewanella : an analog system for putative Martian biosignature identification

ABSTRACT Microbes from terrestrial extreme environments enable testing of biosignature production in conditions relevant to astrobiological targets. Mars, which was likely more conducive to life during early warmer and wetter epochs, has inspired missions that search for signs of early life in the surficial rock record, including mineral or organic biosignatures. Microbial iron reduction is a common and ancient metabolism that may have also operated on other rocky celestial bodies. To investigate biosignature production during iron reduction, aShewanellasp. (strain BF02_Schw) isolated from a subglacial discharge known as Blood Falls, Antarctica, was incubated with the electron acceptor ferrihydrite (Fh). Biosignatures associated with Fh reduction were identified using a suite of techniques currently utilized or proposed for Mars missions, including X-ray diffraction and infrared, Mössbauer, and Raman spectroscopy. The biotic origin of features was validated by transcriptional changes observed between treatments with and without Fh and comparison to killed controls. In live treatments, Fh was reduced to magnetite and goethite, both detected in Martian lacustrine basins. Several soluble and volatile metabolites were also detected, including riboflavin and dimethyl sulfide (DMS), which could be astrobiological indicators of active microbial processes. While none of the identified biosignatures individually would serve as definitive proof of life (past or present), detecting concomitant features associated with known terrestrial biotic processes would provide compelling rationale for more targeted life detection missions. Terrestrial extremophiles can support the exploration of astrobiologically relevant microbial processes, validation of life detection instrumentation, and potentially the discovery of new biomarkers. IMPORTANCE Culture-based experiments with terrestrial extremophiles can elucidate biosignatures that may be analogous to those produced under extraterrestrial conditions, and thus inform sampling and technology strategies for future missions. Here, we demonstrate the production of several biosignatures under iron-reducing conditions byShewanellasp. BF02_Schw, originally isolated from an Antarctic analog feature. These biosignatures could be detectable using flight-ready instrumentation. Growth experiments with terrestrial extremophiles can identify biosignatures measurable by current methodologies and inform the development and optimization of techniques for detecting extant or extinct life on other worlds.

Biotechnology & Applied Microbiology↗

Characterization of prokaryotic communities in Puerto Rican caves using 16S rDNA amplicon sequencing

The cave ecosystems host microbial communities adapted to extreme environments. This study utilized 16S rDNA to investigate the prokaryotic diversity across seven caves in Puerto Rico’s northern limestone karst belt. Microbial profiling revealed distinct subterranean communities, enhancing our understanding of cave microbiology and potential applications in environmental conservation and microbial research.

16S↗

Analysis and Modeling of Lithium Flows in Porous Materials

One of the primary conditions necessary for the success of magnetic fusion reactors is the ability to mitigate damage to the first wall during ELMs and plasma disruptions. A potential solution involves the use of flowing liquid metals such as lithium as a first wall, but ensuring its stability under the extreme environments in the reactor would be imperative. The conditions leading to instabilities on the free surface of flowing liquid lithium (LL) layers on a substrate and in a porous material are investigated using both analytical methods and computational modeling, with consideration for the effects of LL velocity, LL layer thickness, substrate porosity, LL permeability, and hydrogen (H) plasma velocity. Linear stability analysis is used to predict the critical velocity and wavelength-dependence of wave growth, as well as the onset of instability. The modeling of LL flows is performed on a flat substrate and in a porous material for various LL thicknesses, LL and H plasma velocities to analyze the conditions leading to droplet formation and ejection.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Axions: From magnetars and neutron star mergers to beam dumps and BECs

We review topics in searches for axion-like-particles (ALPs), covering material that is complementary to other recent reviews. The first half of our review covers ALPs in the extreme environments of neutron star cores, the magnetospheres of highly magnetized neutron stars (magnetars), and in neutron star mergers. The focus is on possible signals of ALPs in the photon spectrum of neutron stars and gravitational wave/electromagnetic signals from neutron star mergers. We then review recent developments in laboratory-produced ALP searches, focusing mainly on accelerator-based facilities including beam-dump type experiments and collider experiments. We provide a general-purpose discussion of the ALP search pipeline from production to detection, in steps, and our discussion is straightforwardly applicable to most beam-dump type and reactor experiments. We end with a selective look at the rapidly developing field of ultralight dark matter, specifically the formation of Bose–Einstein Condensates (BECs). We review the properties of BECs of ultralight dark matter and bridge these properties with developments in numerical simulations, and ultimately with their impact on experimental searches.

Astronomy & Astrophysics↗

Software For Advanced Large-scale Analysis Of Magnetic Confinement For Numerical Design, Engineering & Research (salamander)

As magnetic confinement fusion energy gains traction internationally to enable abundant energy production, designing components for fusion systems is a pressing challenge. During the planned lifetime of a fusion device, components evolve in extreme environments and must withstand large, repeated thermal loads and bombardment by 14 MeV neutrons, plasma ions, and neutral particles (deuterium, tritium, and helium), corrosive conditions, etc. All these physical processes take place simultaneously, interact in intricate ways, and impose important constraints that can affect performance. Experimental data is rare and costly to obtain, making design particularly challenging. Predictive computational frameworks must be an integral part of an accelerated and cost-effective design process by modeling fusion system performance in simulated environments. To better understand component degradation and operational impacts on their performance, the Software for Advanced Large-scale Analysis of MAgnetic confinement for Numerical Design, Engineering & Research (SALAMANDER) is designed as an open-source, fully integrated, multiphysics, multiscale, NQA-1 compliant framework facilitating 3D, high-fidelity fusion system modeling. To that end, SALAMANDER is a MOOSE-based framework, and therefore leverages MOOSE upstream libraries such as PETSc and libMesh to deliver sophisticated finite element, finite volume, and nonlinear solver technology for fusion energy simulations. SALAMANDER couples MOOSE physics module capabilities—such as thermal hydraulics, heat conduction, Navier-Stokes, and thermomechanics—with tritium transport via TMAP8, neutronics via Cardinal, and nascent particle-in-cell capabilities. Direct simulation Monte Carlo methods will be used to address neutral transport near the walls. By coupling all these physics in an integrated application, SALAMANDER will enable high-fidelity modeling of irradiation levels and plasma exposure conditions of plasma facing components and their impact on heat and tritium distributions, as well as the resulting mechanical constraints experienced by the plasma facing components and performance of blanket systems. Furthermore, SALAMANDER will be particularly suited for engineering studies thanks to the stochastic tool module readily available in MOOSE, allowing for extended uncertainty quantification and risk analysis studies. It is also able to use computer-aided design (CAD) meshes to model complex geometries, which is indispensable for fusion systems. SALAMANDER therefore supports design, safety, engineering, and research projects for magnetic confinement fusion systems

Simon, Pierre-Clement [Idaho National Laboratory (↗

Analysis of Liquids Using the Submerged Plasma for Isotopic Detection and Elemental Resolution (SPIDER)

We developed a sensor called the Submerged Plasma for Isotopic Detection and Elemental Resolution (SPIDER) probe, which uses an atmospheric pressure glow discharge below the surface of liquids to excite species in the liquid. Through emission spectroscopy of molten salts, liquid metals, and heavy water, we demonstrated the SPIDER probe’s high resolution, accuracy, and versatility. We successfully identified trace concentrations of transition and rare-earth metals in molten salts and detected the isotopic shift of the H β → D β emission line. Our analysis revealed unconventional spectral alkali line shapes, indicating two competing excitation modes: film explosion and droplet vaporization. The film explosion mode, characterized by dense plasma, exhibited self-reversal and broadband continuum emission, while the droplet vaporization mode, associated with diffusive plasma, produced narrow-line emissions. Furthermore, by analyzing circuit transients alongside individual plasma events, we observed that film explosions generate higher currents, likely due to a shorter plasma length as the current preferentially flows through the thin liquid layer. Altogether, our results highlight the SPIDER probe’s efficacy and flexibility, making it well-suited for online material quantification of liquids in extreme environments.

AES↗

Multiscale characterization and representation of variability in ceramic matrix composites

Low density, high strength, and high creep and oxidation resistance properties of ceramic matrix composites (CMCs) make them an ideal choice for use in extreme environments in space and military applications. This paper presents a detailed characterization study of structural and manufacturing flaws in Carbon fiber Silicon-Carbide-Nitride matrix (C/SiNC) CMCs at different length-scales. Energy-dispersive spectroscopy (EDS) is used for the chemical characterization of the material’s elemental constituents. High-resolution multiscale graphs obtained from scanning electron microscope (SEM) and confocal laser scanning microscope (LSM) are used to characterize the distribution and morphology of defects at different length scales. This is followed by the classification and quantification of the common manufacturing defects. An image processing algorithm based on the image segmentation process is developed to quantify the variability of various scale-dependent architectural parameters. Finally, a three-dimensional stochastic representative volume element (SRVE) generation algorithm is developed to provide precise representations of material textures at multiple length scales. The developed algorithm accurately accounts for material features and flaws based on a range of multiscale structural and defects characterization results.

36 MATERIALS SCIENCE↗

Genome sequencing of four Aureobasidium pullulans varieties: biotechnological potential, stress tolerance, and description of new species

Aureobasidium pullulans is a black-yeast-like fungus used for production of the polysaccharide pullulan and the antimycotic aureobasidin A, and as a biocontrol agent in agriculture. It can cause opportunistic human infections, and it inhabits various extreme environments. To promote the understanding of these traits, we performed de-novo genome sequencing of the four varieties of A. pullulans. The 25.43-29.62 Mb genomes of these four varieties of A. pullulans encode between 10266 and 11866 predicted proteins. Their genomes encode most of the enzyme families involved in degradation of plant material and many sugar transporters, and they have genes possibly associated with degradation of plastic and aromatic compounds. Proteins believed to be involved in the synthesis of pullulan and siderophores, but not of aureobasidin A, are predicted. Putative stress-tolerance genes include several aquaporins and aquaglyceroporins, large numbers of alkali-metal cation transporters, genes for the synthesis of compatible solutes and melanin, all of the components of the high-osmolarity glycerol pathway, and bacteriorhodopsin-like proteins. All of these genomes contain a homothallic mating-type locus. The differences between these four varieties of A. pullulans are large enough to justify their redefinition as separate species: A. pullulans, A. melanogenum, A. subglaciale and A. namibiae. We observed redundancy in several gene families that can be linked to the nutritional versatility of these species and their particular stress tolerance. In conclusions, the availability of the genome sequences of the four Aureobasidium species should improve their biotechnological exploitation and promote our understanding of their stress-tolerance mechanisms, diverse lifestyles, and pathogenic potential.

Polyextremotolerant↗

Genetic tools for engineering Zymomonas mobilis , Cereibacter sphaeroides and Novosphingobium aromaticivorans to improve production of bioenergy compounds

Limited genetic tools for non-model bacteria are one of the limiting factors for genetic studies. This review compiles genetic tools used for three non-model alpha-proteobacteria, such as Zymomonas mobilis, Cereibacter (Rhodobacter) sphaeroides, and Novosphingobium aromaticivorans, which hold significant potential to produce industrially essential bioenergy compounds due to their distinctive metabolic pathways and resilience in extreme environments. Each of these strains has a unique genetic profile that enables them to efficiently carry out key reactions relevant to producing bioenergy compounds, such as converting sugars into bioenergy compounds and breaking down lignotoxins. Genetic tools can further optimize these strains for enhanced bioenergy compound production. This review explores the metabolic advantages of these organisms. It highlights the available array of genetic toolkits that can be shared among them to unlock their full potential for sustainable biofuel production.

Biofuel↗

Highly diverse and unknown viruses may enhance Antarctic endoliths’ adaptability

Abstract Background Rock-dwelling microorganisms are key players in ecosystem functioning of Antarctic ice free-areas. Yet, little is known about their diversity and ecology, and further still, viruses in these communities have been largely unexplored despite important roles related to host metabolism and nutrient cycling. To begin to address this, we present a large-scale viral catalog from Antarctic rock microbial communities. Results We performed metagenomic analyses on rocks from across Antarctica representing a broad range of environmental and spatial conditions, and which resulted in a predicted viral catalog comprising > 75,000 viral operational taxonomic units (vOTUS). We found largely undescribed, highly diverse and spatially structured virus communities which had predicted auxiliary metabolic genes (AMGs) with functions indicating that they may be potentially influencing bacterial adaptation and biogeochemistry. Conclusion This catalog lays the foundation for expanding knowledge of virosphere diversity, function, spatial ecology, and dynamics in extreme environments. This work serves as a step towards exploring adaptability of microbial communities in the face of a changing climate.

59 BASIC BIOLOGICAL SCIENCES↗

Bulk Viscosity in Dense Nuclear Matter

NEUTRON star mergers are an extreme environment where, within milliseconds, the cold, dense matter in neutron stars is dramatically heated to some of the hottest temperatures encountered in astrophysics. Matter in neutron star mergers is located solidly in the interior of the QCD phase diagram, and therefore, the observation and simulation of these mergers provides an opportunity to learn about the strong interaction at a set of densities and temperatures that compliment those obtained in relativistic heavy-ion collisions. Matter during the merger of two neutron stars is far from hydrostatic equilibrium, allowing for the study of not only the equation of state of dense matter, but of transport properties as well. Perhaps the most likely transport property to play a role in neutron star mergers is the bulk viscosity, which acts to resist changes in density. Furthermore, the bulk viscosity of matter at high densities has long been anticipated to damp oscillations in isolated neutron stars, and the study of its role in neutron star mergers is just beginning.

Harris, Steven P.↗

Thermally robust and highly stable method for splicing silica glass fiber to crystalline sapphire fiber

This research reports an advancement in splicing silica glass fiber to sapphire single-crystal optical fiber (SCF) using a specialized glass processing device, including data that demonstrate the thermal stability of the splice to 1000°C. A filament heating process was used to produce a robust splice between the dissimilar fibers. A femtosecond laser is used to inscribe a fiber Bragg gratings sensor into the SCF to measure the high-temperature capabilities and signal attenuation characteristics of the splice joint. The experimental results demonstrate that the proposed splicing method produces a splice joint that is robust, stable, repeatable, and withstands temperatures up to 1000°C with a low attenuation of 0.5 dB. Here, the proposed method allows placement of SCF-based sensors in the extreme environments encountered in various engineering fields, such as nuclear, chemical, aviation, and metals manufacturing, to enable improvements in process monitoring, product quality, and production efficiency.

36 MATERIALS SCIENCE↗

VULCAN: A “hammer” for high-temperature materials research

Understanding changes in chemistry, microstructure, and physical properties during synthesis, processing, testing, and even service is vital for materials design and performance. Compared to traditional postmortem material characterization tools, in situ crystallographic characterization can provide considerable data and information on evolution of chemistry, dislocations, twinning, texture, and strains when a material is under external stimuli. Neutrons especially are able to probe material bulk properties and behaviors in extreme environments, thanks to their deep penetrating power and unique sensitivity to differentiate elements from lightweight to transition-metal atoms. In this article, we introduce and describe a diffractometer named VULCAN, which is located at Oak Ridge National Laboratory. Finally, this represents a powerful tool to understand materials properties and behaviors under complex environments, in particular, at high temperatures.

36 MATERIALS SCIENCE↗

Atomic-scale design of radiation-tolerant nanocomposites

Recent work indicates that materials with nanoscale architectures, such as nanolayered Cu-Nb composites and nanoscale oxide dispersion-strengthened steels, are both thermally stable and offer improved performance under irradiation. Current understanding of the atomic-level response of such materials to radiation yields insights into how controlling composition, morphology, and interface-defect interactions may further enable atomic-scale design of radiation-tolerant nanostructured composite materials. With greater understanding of irradiation-assisted degradation mechanisms, this bottom-up design approach may pave the way for creating the extreme environment—tolerant structural materials needed to meet the world's clean energy demand by expanding use of advanced fission and future fusion power.

36 MATERIALS SCIENCE↗

High-efficiency high-energy Ka source for the critically-required maximum illumination of x-ray optics on Z using Z-petawatt-driven laser-breakout-afterburner accelerated ultrarelativistic electrons LDRD .

Under the auspices of the Science of Extreme Environments LDRD program, a <2 year theoretical- and computational-physics study was performed (LDRD Project 130805) by Guy R Bennett (formally in Center-01600) and Adam B. Sefkow (Center-01600): To investigate novel target designs by which a short-pulse, PW-class beam could create a brighter K{alpha} x-ray source than by simple, direct-laser-irradiation of a flat foil; Direct-Foil-Irradiation (DFI). The computational studies - which are still ongoing at this writing - were performed primarily on the RedStorm supercomputer at Sandia National Laboratories Albuquerque site. The motivation for a higher efficiency K{alpha} emitter was very clear: as the backlighter flux for any x-ray imaging technique on the Z accelerator increases, the signal-to-noise and signal-to-background ratios improve. This ultimately allows the imaging system to reach its full quantitative potential as a diagnostic. Depending on the particular application/experiment this would imply, for example, that the system would have reached its full design spatial resolution and thus the capability to see features that might otherwise be indiscernible with a traditional DFI-like x-ray source. This LDRD began FY09 and ended FY10.

43 PARTICLE ACCELERATORS↗

Summary of Blast Shield and Material Testing for Development of Solid Debris Collection at the National Ignition Facility (NIF)

The ability to collect solid debris from the target chamber following a NIF shot has application for both capsule diagnostics, particularly for fuel-ablator mix, and measuring cross sections relevant to the Stockpile Stewardship program and nuclear astrophysics. Simulations have shown that doping the capsule with up to 10 15 atoms of an impurity not otherwise found in the capsule does not affect its performance. The dopant is an element that will undergo nuclear activations during the NIF implosion, forming radioactive species that can be collected and measured after extraction from the target chamber. For diagnostics, deuteron or alpha induced reactions can be used to probe the fuel-ablator mix. For measuring neutron cross sections, the dopant should be something that is sensitive to the 14 MeV neutrons produced through the fusion of deuterium and tritium. Developing the collector is a challenge due to the extreme environment of the NIF chamber. The collector surface is exposed to a large photon flux from x-rays and unconverted laser light before it is exposed to a debris wind that is formed from vaporized material from the target chamber center. The photons will ablate the collector surface to some extent, possibly impeding the debris from reaching the collector and sticking. In addition, the collector itself must be mechanically strong enough to withstand the large amount of energy it will be exposed to, and it should be something that will be easy to count and chemically process. In order to select the best material for the collector, a variety of different metals have been tested in the NIF chamber. They were exposed to high-energy laser shots in order to evaluate their postshot surface characterization, morphology, degree of melt, and their ability to retain debris from the chamber center. The first set of samples consisted of 1 mm thick pieces of aluminum that had been fielded in the chamber as blast shields protecting the neutron activation diagnostic. Ten of these pieces were fielded at the equator and one was fielded on the pole. The shields were analyzed using a combination of scanning electron microscopy (SEM), energy dispersive spectroscopy (EDS), x-ray fluorescence (XRF), neutron activation analysis (NAA) and chemical leaching followed by mass spectrometry. On each shield, gold debris originating from the gold hohlraum was observed, as well as large quantities of debris that were present in the center of the target chamber at the time of the shot (i.e., stainless steel, indium, copper, etc.) Debris was visible in the SEM as large blobs or splats of material that had encountered the surface of the aluminum and stuck. The aluminum itself had obviously melted and condensed, and some of the large debris splats arrived after the surface had already hardened. Melt depth was determined by cross sectioning the pieces and measuring the melted surface layers via SEM. After the SEM analysis was completed, the pieces were sent for NAA at the USGS reactor and were analyzed by U. Greife at the Colorado School of Mines. The NAA showed that the majority of gold mass present on the shields was not in the form of large blobs and splats, but was present as small particulates that had most likely formed as condensed vapor. Further analysis showed that the gold was entrained in the melted aluminum surface layers and did not extend down into the bulk of the aluminum. Once the gold mass was accounted for from the NAA, it was determined that the aluminum fielded at the equator was collecting a fraction of the total gold hohlraum mass equivalent to 120% ± 10% of the solid angle subtended by the shield. The attached presentation has more information on the results of the aluminum blast shield analysis. In addition to the information given in the presentation, the surfaces of the shields have been chemically leached and submitted for mass spectrometric analysis. The results from that analysis are expected to arrive after the due date of this report and will be written up at a later time. Based on the results of the aluminum blast shield analysis, it was determined that additional materials needed to be tested as potential collectors in the NIF chamber. 1-2 mm thick pieces of tantalum, niobium, vanadium, silver, titanium, molybdenum, and graphite foil were fielded in the Wedge Range Filter (WRF) mount at a distance of 50 cm from target chamber center during the shock timing campaign. The pieces were subsequently removed and analyzed in a similar fashion to the aluminum shields. As of this writing, the pieces are still under analysis, but initial results indicate that gold debris was collected on the various materials. Currently, the pieces are being cross-sectioned so that the melt depths of each material can be compared. In addition, NAA and/or mass spectrometry will be performed in order to determine the total gold mass that was collected on each surface.

36 MATERIALS SCIENCE↗

New Density Functional Theory Approaches for Enabling Prediction of Chemical and Physical Properties of Plutonium and Other Actinides

Density Functional Theory (DFT) based Equation of State (EOS) construction is a prominent part of Sandia's capabilities to support engineering sciences. This capability is based on amending experimental data with information gained from computational investigations, in parts of the phase space where experimental data is hard, dangerous, or expensive to obtain. A prominent materials area where such computational investigations are hard to perform today because of limited accuracy is actinide and lanthanide materials. The Science of Extreme Environment Lab Directed Research and Development project described in this Report has had the aim to cure this accuracy problem. We have focused on the two major factors which would allow for accurate computational investigations of actinide and lanthanide materials: (1) The fully relativistic treatment needed for materials containing heavy atoms, and (2) the needed improved performance of DFT exchange-correlation functionals. We have implemented a fully relativistic treatment based on the Dirac Equation into the LANL code RSPt and we have shown that such a treatment is imperative when calculating properties of materials containing actinides and/or lanthanides. The present standard treatment that only includes some of the relativistic terms is not accurate enough and can even give misleading results. Compared to calculations previously considered state of the art, the Dirac treatment gives a substantial change in equilibrium volume predictions for materials with large spin-orbit coupling. For actinide and lanthanide materials, a Dirac treatment is thus a fundamental requirement in any computational investigation, including those for DFT-based EOS construction. For a full capability, a DFT functional capable of describing strongly correlated systems such as actinide materials need to be developed. Using the previously successful subsystem functional scheme developed by Mattsson et.al., we have created such a functional. In this functional the Harmonic Oscillator Gas is providing the necessary reference system for the strong correlation and localization occurring in actinides. Preliminary testing shows that the new Hao-Armiento-Mattsson (HAM) functional gives a trend towards improved results for the crystalline copper oxide test system we have chosen. This test system exhibits the same exchange-correlation physics as the actinide systems do, but without the relativistic effects, giving access to a pure testing ground for functionals. During the work important insights have been gained. An example is that currently available functionals, contrary to common belief, make large errors in so called hybridization regions where electrons from different ions interact and form new states. Together with the new understanding of functional issues, the Dirac implementation into the RSPt code will permit us to gain more fundamental understanding, both quantitatively and qualitatively, of materials of importance for Sandia and the rest of the Nuclear Weapons complex.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗