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At least 973 records · Page 54

WOMBAT: A Scalable and High-performance Astrophysical Magnetohydrodynamics Code

We present a new code for astrophysical magnetohydrodynamics specifically designed and optimized for high performance and scaling on modern and future supercomputers. We describe a novel hybrid OpenMP/MPI programming model that emerged from a collaboration between Cray, Inc. and the University of Minnesota. This design utilizes MPI-RMA optimized for thread scaling, which allows the code to run extremely efficiently at very high thread counts ideal for the latest generation of multi-core and many-core architectures. Such performance characteristics are needed in the era of “exascale” computing. We describe and demonstrate our high-performance design in detail with the intent that it may be used as a model for other, future astrophysical codes intended for applications demanding exceptional performance.

79 ASTRONOMY AND ASTROPHYSICS↗

A message passing kernel for the hypercluster parallel processing test bed

A Message-Passing Kernel (MPK) for the Hypercluster parallel-processing test bed is described. The Hypercluster is being developed at the NASA Lewis Research Center to support investigations of parallel algorithms and architectures for computational fluid and structural mechanics applications. The Hypercluster resembles the hypercube architecture except that each node consists of multiple processors communicating through shared memory. The MPK efficiently routes information through the Hypercluster, using a message-passing protocol when necessary and faster shared-memory communication whenever possible. The MPK also interfaces all of the processors with the Hypercluster operating system (HYCLOPS), which runs on a Front-End Processor (FEP). This approach distributes many of the I/O tasks to the Hypercluster processors and eliminates the need for a separate I/O support program on the FEP.

Blech, Richard A.↗

DFT algorithms for bit-serial GaAs array processor architectures

Systems and Processes Engineering Corporation (SPEC) has developed an innovative array processor architecture for computing Fourier transforms and other commonly used signal processing algorithms. This architecture is designed to extract the highest possible array performance from state-of-the-art GaAs technology. SPEC's architectural design includes a high performance RISC processor implemented in GaAs, along with a Floating Point Coprocessor and a unique Array Communications Coprocessor, also implemented in GaAs technology. Together, these data processors represent the latest in technology, both from an architectural and implementation viewpoint. SPEC has examined numerous algorithms and parallel processing architectures to determine the optimum array processor architecture. SPEC has developed an array processor architecture with integral communications ability to provide maximum node connectivity. The Array Communications Coprocessor embeds communications operations directly in the core of the processor architecture. A Floating Point Coprocessor architecture has been defined that utilizes Bit-Serial arithmetic units, operating at very high frequency, to perform floating point operations. These Bit-Serial devices reduce the device integration level and complexity to a level compatible with state-of-the-art GaAs device technology.

Mcmillan, Gary B.↗

SIPMaP: A Tool for Modeling Irregular Parallel Computations in the Super Instruction Architecture

Performance modeling is becoming an increasingly important part of the parallel application development process, particularly for expensive computations that will be run on very high-end systems where resources are scarce. We describe a performance modeling tool SIPMaP (Super Instruction Processor Modeling and Prediction) developed for the Super-Instruction Architecture (SIA). The SIA is designed for applications where the dominant data structures are large multi-dimensional arrays and it comprises a DSL, the Super-Instruction Assembly Language (SIAL) that supports expressing algorithms in terms of blocks (tiles), and its runtime system Super Instruction Processor (SIP) that manages distribution and disk storage of the arrays. SIPMaP generates performance models from the SIAL source code. In comparison with many applications where useful performance models have been developed and reported, these programs are irregular and have other difficult to model characteristics such as extensive overlapping of communication and computation.

Computer Science↗

Development of a Subcell Based Modeling Approach for Modeling the Architecturally Dependent Impact Response of Triaxially Braided Polymer Matrix Composites

Understanding the high velocity impact response of polymer matrix composites with complex architectures is critical to many aerospace applications, including engine fan blade containment systems where the structure must be able to completely contain fan blades in the event of a blade-out. Despite the benefits offered by these materials, the complex nature of textile composites presents a significant challenge for the prediction of deformation and damage under both quasi-static and impact loading conditions. The relatively large mesoscale repeating unit cell (in comparison to the size of structural components) causes the material to behave like a structure rather than a homogeneous material. Impact experiments conducted at NASA Glenn Research Center have shown the damage patterns to be a function of the underlying material architecture. Traditional computational techniques that involve modeling these materials using smeared homogeneous, orthotropic material properties at the macroscale result in simulated damage patterns that are a function of the structural geometry, but not the material architecture. In order to preserve heterogeneity at the highest length scale in a robust yet computationally efficient manner, and capture the architecturally dependent damage patterns, a previously-developed subcell modeling approach where the braided composite unit cell is approximated as a series of four adjacent laminated composites is utilized. This work discusses the implementation of the subcell methodology into the commercial transient dynamic finite element code LS-DYNA (Livermore Software Technology Corp.). Verification and validation studies are also presented, including simulation of the tensile response of straight-sided and notched quasi-static coupons composed of a T700/PR520 triaxially braided [0deg/60deg/-60deg] composite. Based on the results of the verification and validation studies, advantages and limitations of the methodology as well as plans for future work are discussed.

finite element method↗

A Monte Carlo neutron transport code for eigenvalue calculations on a dual-GPU system and CUDA environment

Monte Carlo (MC) method is able to accurately calculate eigenvalues in reactor analysis. Its lengthy computation time can be reduced by general-purpose computing on Graphics Processing Units (GPU), one of the latest parallel computing techniques under development. The method of porting a regular transport code to GPU is usually very straightforward due to the 'embarrassingly parallel' nature of MC code. However, the situation becomes different for eigenvalue calculation in that it will be performed on a generation-by-generation basis and the thread coordination should be explicitly taken care of. This paper presents our effort to develop such a GPU-based MC code in Compute Unified Device Architecture (CUDA) environment. The code is able to perform eigenvalue calculation under simple geometries on a multi-GPU system. The specifics of algorithm design, including thread organization and memory management were described in detail. The original CPU version of the code was tested on an Intel Xeon X5660 2.8 GHz CPU, and the adapted GPU version was tested on NVIDIA Tesla M2090 GPUs. Double-precision floating point format was used throughout the calculation. The result showed that a speedup of 7.0 and 33.3 were obtained for a bare spherical core and a binary slab system respectively. The speedup factor was further increased by a factor of {approx}2 on a dual GPU system. The upper limit of device-level parallelism was analyzed, and a possible method to enhance the thread-level parallelism was proposed. (authors)

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

Algorithmically Specialized Parallel Architecture For Robotics

Computing system called Robot Mathematics Processor (RMP) contains large number of processor elements (PE's) connected in various parallel and serial combinations reconfigurable via software. Special-purpose architecture designed for solving diverse computational problems in robot control, simulation, trajectory generation, workspace analysis, and like. System an MIMD-SIMD parallel architecture capable of exploiting parallelism in different forms and at several computational levels. Major advantage lies in design of cells, which provides flexibility and reconfigurability superior to previous SIMD processors.

Fijany, Amir↗

Summer Proceedings 2019

The Computer Science Research Institute (CSRI) brings university faculty and students to Sandia for focused collaborative research on Department of Energy (DOE) computer and computational science problems. The institute provides an opportunity for university researchers to learn about problems in computer and computational science at DOE laboratories. Participants conduct leading-edge research, interact with scientists and engineers at the laboratories, and help transfer results of their research to programs at the labs. Some specific CSRI research interest areas are: scalable solvers, optimization, adaptivity and mesh refinement, graph-based, discrete, and combinatorial algorithms, uncertainty estimation, mesh generation, dynamic load-balancing, virus and other malicious-code defense, visualization, scalable cluster computers and heterogeneous computers, data-intensive computing, environments for scalable computing, parallel input/output, advanced architectures, and theoretical computer science. The CSRI Summer Program includes the organization of a weekly seminar series and the publication of this summer proceedings.

97 MATHEMATICS AND COMPUTING↗

CSRI Summer Proceedings 2020

The Computer Science Research Institute (CSRI) brings university faculty and students to Sandia for focused collaborative research on Department of Energy (DOE) computer and computational science problems. The institute provides an opportunity for university researchers to learn about problems in computer and computational science at DOE laboratories. Participants conduct leading-edge research, interact with scientists and engineers at the laboratories, and help transfer results of their research to programs at the labs. Some specific CSRI research interest areas are: scalable solvers, optimization, adaptivity and mesh refinement, graph-based, discrete, and combinatorial algorithms, uncertainty estimation, mesh generation, dynamic load-balancing, virus and other malicious-code defense, visualization, scalable cluster computers, data-intensive computing, environments for scalable computing, parallel input/output, advanced architectures, and theoretical computer science. The CSRI Summer Program is organized by CSRI and typically includes the organization of a weekly seminar series and the publication of a summer proceedings. In 2020, the CSRI summer program was executed completely virtually; all student interns worked from home, due to the COVID-19 pandemic.

97 MATHEMATICS AND COMPUTING↗

Transportable telemetry workstation for future distributed system environments

A Transportable Telemetry Workstation (TTW) has been developed to meet the need for reduction in size and cost per station while maintaining high performance specifications in distributed system environments. The TTW consists primarily of the adaptation of NASA's Goddard Space Flight Center VLSI components and system architecture to a personal computer and its architecture. The overall system, the architecture, the TTW Controller Card, TTW Synchronizer Card, custom backplane bus, and system software structure are described.

Collins, Aaron↗

Planning for Compilation of a Quantum Algorithm for Graph Coloring

Recently, the problem of compiling general quantum algorithms for implementation on near-term quantum processors has been introduced to the AI community. Previous work demonstrated that temporal planning is an attractive approach for part of this compilation task, specifically, the routing of circuits that implement the Quantum Alternating Operator Ansatz (QAOA) applied to theMaxCut problem on a quantum processor architecture. In this paper, we extend the earlier work to route circuits that implement QAOAfor Graph Coloring problems. QAOA for coloring requires execution of more, and more complex, operations on the chip, which makes routing a more challenging problem. We evaluate the approach on state-of-the-art hardware architectures from leading quantum computing companies. Additionally, we investigate applying the planning approach to qubit initialization as well as routing. Our empirical evaluation shows that temporal planning compares well to reasonable analytic upper bounds [20], and that solving qubit initialization with a classical planner generally helps temporal planners in finding shorter-makespan compilations for QAOA for Graph Coloring.These advances suggest that temporal planning can be an effective approach for more complex quantum computing algorithms and architectures.

Minh Do↗

Accelerating Scientific Applications With SambaNova Reconfigurable Dataflow Architecture

Here, our exploratory work finds that the SambaNova Reconfigurable Dataflow Architecture (RDA) along with the SambaFlow software stack provides for an attractive system and solution to accelerate AI for science workloads. We have observed the efficacy of using the system with a diverse set of science applications and reasoned their suitability for performance gains over traditional hardware. As the Data-Scale system provides for a very large memory capacity, the system can be used to train models that typically do not fit in a GPU. The architecture also provides for deeper integration with upcoming supercomputers at the Argonne Leadership Computing Facility (ALCF), a US Department of Energy Office of Science user facility, to help advance science insights.

97 MATHEMATICS AND COMPUTING↗

Track reconstruction as a service for collider physics

Optimizing charged-particle track reconstruction algorithms is crucial for efficient event reconstruction in Large Hadron Collider (LHC) experiments due to their significant computational demands. Existing track reconstruction algorithms have been adapted to run on massively parallel coprocessors, such as graphics processing units (GPUs), to reduce processing time. Nevertheless, challenges remain in fully harnessing the computational capacity of coprocessors in a scalable and non-disruptive manner. This paper proposes an inference-as-a-service approach for particle tracking in high energy physics experiments. To evaluate the efficacy of this approach, two distinct tracking algorithms are tested: Patatrack, a rule-based algorithm, and Exa.TrkX, a machine learning-based algorithm. The as-a-service implementations show enhanced GPU utilization and can process requests from multiple CPU cores concurrently without increasing per-request latency. The impact of data transfer is minimal and insignificant compared to running on local coprocessors. This approach greatly improves the computational efficiency of charged particle tracking, providing a solution to the computing challenges anticipated in the High-Luminosity LHC era.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Integration of facility modeling capabilities for nuclear nonproliferation analysis

Developing automated methods for data collection and analysis that can facilitate nuclearnonproliferation assessment is an important research area with significant consequences for the effective global deployment of nuclear energy. Facilitymodeling that can integrate and interpret observations collected from monitored facilities in order to ascertain their functional details will be a critical element of these methods. Although improvements are continually sought, existing facilitymodeling tools can characterize all aspects of reactor operations and the majority of nuclear fuel cycle processing steps, and include algorithms for data processing and interpretation. Assessing nonproliferation status is challenging because observations can come from many sources, including local and remote sensors that monitor facility operations, as well as open sources that provide specific business information about the monitored facilities, and can be of many different types. Although many current facility models are capable of analyzing large amounts of information, they have not been integrated in an analyst-friendly manner. This paper addresses some of these facilitymodelingcapabilities and illustrates how they could be integrated and utilized for nonproliferationanalysis. The inverse problem of inferring facility conditions based on collected observations is described, along with a proposed architecture and computer framework for utilizing facilitymodeling tools. After considering a representative sampling of key facilitymodelingcapabilities, the proposed integration framework is illustrated with several examples.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

On multigrid methods for the Navier-Stokes Computer

The overall architecture of the multipurpose parallel-processing Navier-Stokes Computer (NSC) being developed by Princeton and NASA Langley (Nosenchuck et al., 1986) is described and illustrated with extensive diagrams, and the NSC implementation of an elementary multigrid algorithm for simulating isotropic turbulence (based on solution of the incompressible time-dependent Navier-Stokes equations with constant viscosity) is characterized in detail. The present NSC design concept calls for 64 nodes, each with the performance of a class VI supercomputer, linked together by a fiber-optic hypercube network and joined to a front-end computer by a global bus. In this configuration, the NSC would have a storage capacity of over 32 Gword and a peak speed of over 40 Gflops. The multigrid Navier-Stokes code discussed would give sustained operation rates of about 25 Gflops.

Nosenchuck, D. M.↗

Active Measurement of the Impact of Network SwitchUtilization on Application Performance

Inter-node networks are a key capability of High-Performance Computing (HPC) systems that differentiates them from less capable classes of machines. However, in spite of their very high performance, the increasing computational power of HPC compute nodes and the associated rise in application communication needs make network performance a common performance bottleneck. To achieve high performance in spite of network limitations application developers require tools to measure their applications’ network utilization and inform them about how the network’s communication capacity relates to the performance of their applications. This paper presents a new performance measurement and analysis methodology based on empirical measurements of network behavior. Our approach uses two benchmarks that inject extra network communication. The first probes the fraction of the network that is utilized by a software component (an application or an individual task) to determine the existence and severity of network contention. The second aggressively injects network traffic while a software component runs to evaluate its performance on less capable networks or when it shares the network with other software components. We then combine the information from the two types of experiment to predict the performance slowdown experienced by multiple software components (e.g. multiple processes of a single MPI application) when they share a single network. Our methodology is applied to individual network switches and demonstrated on two real systems with different types of switches and compute node architectures.

97 MATHEMATICS AND COMPUTING↗

Time-sliced quantum circuit partitioning for modular architectures

Current quantum computer designs will not scale. To scale beyond small prototypes, quantum architectures will likely adopt a modular approach with clusters of tightly connected quantum bits and sparser connections between clusters. We exploit this clustering and the statically-known control flow of quantum programs to create tractable partitioning heuristics which map quantum circuits to modular physical machines one time slice at a time. Specifically, we create optimized mappings for each time slice, accounting for the cost to move data from the previous time slice and using a tunable lookahead scheme to reduce the cost to move to future time slices. We compare our approach to a traditional statically-mapped, owner-computes model. Our results show strict improvement over the static mapping baseline. Here, we reduce the non-local communication overhead by 89.8% in the best case and by 60.9% on average. Our techniques, unlike many exact solver methods, are computationally tractable.

Baker, Jonathan M.↗

Developing the Next Generation of Science Data System Engineers

At Goddard, engineers and scientists with a range of experience in science data systems are needed to employ new technologies and develop advances in capabilities for supporting new Earth and Space science research. Engineers with extensive experience in science data, software engineering and computer-information architectures are needed to lead and perform these activities. The increasing types and complexity of instrument data and emerging computer technologies coupled with the current shortage of computer engineers with backgrounds in science has led the need to develop a career path for science data systems engineers and architects.The current career path, in which undergraduate students studying various disciplines such as Computer Engineering or Physical Scientist, generally begins with serving on a development team in any of the disciplines where they can work in depth on existing Goddard data systems or serve with a specific NASA science team. There they begin to understand the data, infuse technologies, and begin to know the architectures of science data systems. From here the typical career involves peermentoring, on-the-job training or graduate level studies in analytics, computational science and applied science and mathematics. At the most senior level, engineers become subject matter experts and system architect experts, leading discipline-specific data centers and large software development projects. They are recognized as a subject matter expert in a science domain, they have project management expertise, lead standards efforts and lead international projects. A long career development remains necessary not only because of the breadth of knowledge required across physical sciences and engineering disciplines, but also because of the diversity of instrument data being developed today both by NASA and international partner agencies and because multidiscipline science and practitioner communities expect to have access to all types of observational data.This paper describes an approach to defining career-path guidance for college-bound high school and undergraduate engineering students, junior and senior engineers from various disciplines.

Next Generation of Science↗