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NASA NTRS2001

The AIRES Optical Design

AIRES (Airborne InfraRed Echelle Spectrometer) is the facility spectrometer for SOFIA (Stratospheric Observatory For Infrared Astronomy). AIRES is a long-slit (approximately 160 in) spectrometer designed to cover the 17 to 210-micron range with good sensitivity using three spectroscopic arrays. Initially, only the 30-130 micron, mid-wavelength array will be available. The instrument has a cryogenic K-mirror to perform field rotation and a slit-viewing camera (lambda < 28 microns, FOV = 160 in diameter) to image source morphology and verify telescope pointing. AIRES employs a large echelle grating to achieve a spectral resolving power (lambda/delta lambda) of approximately 1.0 x 10(exp 6)/lambda (sub mu), where lambda (sub mu) is the wavelength in microns. Hyperfine, Inc. has ruled and tested the AIRES' echelle; its wave-front error is 0.028 waves RMS (root mean square) at 10.6 microns. The instrument is housed in a liquid-helium cryostat which is constrained in diameter (approximately 1 m) and length (approximately 2 m) by the observatory. Hence, the length of the echelle (approximately 1.1 m) and the focal length of its collimator (approximately 5.2 m) severely drive the optical design and packaging. The final design uses diamond-turned aluminum optics and has up to 19 reflections inside the cryostat, depending on the optical path. This design was generated, optimized, and toleranced using Code V. The predicted performance is nearly diffraction-limited at 17 microns; the error budget is dominated by design residuals. Light loss due to slit rotation and slit curvature has been minimized. A thorough diffraction analysis with GLAD (G-Level Analysis Drawer) was used to size the mirrors and baffles; the internal light loss is shown to be a strong function of slit width.

Haas, Michael R.↗

NASA NTRS2000

Influence of Humidity On the Aerosol Scattering Coefficient and Its Effect on the Upwelling Radiance During ACE-2

Aerosol scattering coefficients (sigma(sub sp)) have been measured over the ocean at different relative humidities (RH) as a function of altitude in the region surrounding the Canary Islands during the Second Aerosol Characterization Experiment (ACE-2) in June and July 1997. The data were collected by the University of Washington passive humidigraph (UWPH) mounted on the Pelican research aircraft. Concurrently, particle size distributions, absorption coefficients and aerosol optical depth were measured throughout 17 flights. A parameterization of sigma(sub sp) as a function of RH was utilized to assess the impact of aerosol hydration on the upwelling radiance (normalized to the solar constant and cosine of zenith angle). The top of the atmosphere radiance signal was simulated at wavelengths corresponding to visible and near-infrared bands of the EOS (Earth Observing System) AM-1 (Terra) detectors, MODIS (Moderate Resolution Imaging Spectroradiometer) and MISR (Multi-angle Imaging Spectroradiometer). The UWPH measured sigma(sub sp) at two RHs, one below and the other above ambient conditions. Ambient sigma(sub sp) was obtained by interpolation of these two measurements. The data were stratified in terms of three types of aerosols: Saharan dust, clean marine (marine boundary layer background) and polluted marine aerosols (i.e., two- or one-day old polluted aerosols advected from Europe). An empirical relation for the dependence of sigma(sub sp) on RH, defined by sigma(sub sp)(RH) = k.(1 - RH/100)(sup gamma), was used with the hygroscopic exponent gamma derived from the data. The following gamma values were obtained for the 3 aerosol types: gamma(dust) = 0.23 +/- 0.05, gamma(clean marine) = 0.69 +/- 0.06 and gamma(polluted marine) = 0.57 +/- 0.06. Based on the measured gammas, the above equation was utilized to derive aerosol models with different hygroscopicities. The satellite simulation signal code 6S was used to compute the upwelling radiance corresponding to each of those aerosol models at several ambient humidities. For the prelaunch estimated precision of the sensors and the assumed viewing geometry of the instrument, the simulations suggest that the spectral and angular dependence of the reflectance measured by MISR is not sufficient to distinguish aerosol models with various different combinations of values for dry composition, gamma and ambient RH. A similar behavior is observed for MODIS at visible wavelengths. However, the 2100 nm band of MODIS appears to be able to differentiate between at least same aerosol models with different aerosol hygroscopicity given the MODIS calibration error requirements. This result suggests the possibility of retrieval of aerosol hygroscopicity by MODIS.

Gasso, S.↗

NASA NTRS2015

Report on GMI Special Study #15: Radio Frequency Interference

This report contains the results of GMI special study #15. An analysis is conducted to identify sources of radio frequency interference (RFI) to the Global Precipitation Measurement (GPM) Microwave Imager (GMI). The RFI impacts the 10 GHz and 18 GHz channels at both polarities. The sources of RFI are identified for the following conditions: over the water (including major inland water bodies) in the earth view, and over land in the earth view, and in the cold sky view. A best effort is made to identify RFI sources in coastal regions, with noted degradation of flagging performance due to the highly variable earth scene over coastal regions. A database is developed of such sources, including latitude, longitude, country and city of earth emitters, and position in geosynchronous orbit for space emitters. A description of the recommended approach for identifying the sources and locations of RFI in the GMI channels is given in this paper. An algorithm to flag RFI contaminated pixels which can be incorporated into the GMI Level 1Base/1B algorithms is defined, which includes Matlab code to perform the necessary flagging of RFI. A Matlab version of the code is delivered with this distribution.

radio frequency interference↗

NASA NTRS2019

Creating Data-Driven Vector Visualizations of Satellite Orbit Tracks Using NASA GIBS and Worldview

NASA Earth Observing System (EOS) currently operates dozens of remote sensing satellites, many of which can be viewed directly in NASA’s open-source Worldview application. Much of this satellite imagery can be viewed in near-real time as it is processed and served by NASA’s Global Imagery Browse Service (GIBS). To better educate users on the time and location of imagery, GIBS serves orbit track specific layers for each satellite. Worldview has historically served these layers as raster images but recent updates have enabled the application to now serve these layers using vector tiles. With the release of Worldview v3.0, orbit track layers can be displayed using mapbox vector tiles (MVT). This visualization format allows users to not only view and change the color of orbit track layers, as they could do previously with rasters, but also inspect individual vector points and filter layers by specific parameters such as time. The data contained within a MVT is further enhanced in Worldview with the combination of a JSON description file served from GIBS used to describe the MVT data. This presentation will provide an overview of the process of consuming orbit track vector tiles and data files from GIBS using a pipeline to configure, build and ultimately display the orbit tracks in Worldview. Furthermore, the presentation aims to describe how others can leverage our open-source code to display and enhance vector layers in their own applications.

Rice, Zachary↗

NASA NTRS2022

Modeling and Performance Analysis of the LUVOIR Coronagraph Instrument

Future space missions such as the Large UV/Optical/Infrared Surveyor (LUVOIR) and the Habitable Exoplanet Observatory, when equipped with coronagraphs with active wavefront control to suppress starlight, will allow the discovery and characterization of habitable exoplanets. The Extreme Coronagraph for Living Planetary Systems (ECLIPS) is the coronagraph instrument on the LUVOIR Surveyor mission concept, an 8- to 15-m segmented telescope. ECLIPS is split into three channels, namely, UV (200 to 400 nm), optical (400 to 850 nm), and near IR (850 nm to 2 μm), with each channel equipped with two deformable mirrors for wavefront control, a suite of coronagraph masks, a low-order/out-of-band wavefront sensor, and separate science imagers and spectrographs. The apodized pupil Lyot coronagraph and the vector vortex coronagraph are the baselined mask technologies for ECLIPS to enable the required 10−10 contrast for observations in the habitable zones of nearby stars for LUVOIR-A (15-m telescope) and LUVOIR-B (8-m telescope), respectively. Their performance depends on active wavefront sensing and control, as well as metrology subsystems to compensate for aberrations induced by segment errors (e.g., piston and tip/tilt), secondary mirror misalignment, and global low-order wavefront errors. Here, we present the latest results of the simulation of these effects for the LUVOIR coronagraph instrument and discuss the achieved contrast for exoplanet detection and characterization after closed-loop wavefront estimation and control algorithms have been applied. Finally, we show simulated observations using high-fidelity spatial and spectral input models of complete planetary systems generated with the Haystacks code framework.

Roser Juanola-Parramon↗

NASA NTRS2007

A Simple Stochastic Model for Generating Broken Cloud Optical Depth and Top Height Fields

A simple and fast algorithm for generating two correlated stochastic twodimensional (2D) cloud fields is described. The algorithm is illustrated with two broken cumulus cloud fields: cloud optical depth and cloud top height retrieved from Moderate Resolution Imaging Spectrometer (MODIS). Only two 2D fields are required as an input. The algorithm output is statistical realizations of these two fields with approximately the same correlation and joint distribution functions as the original ones. The major assumption of the algorithm is statistical isotropy of the fields. In contrast to fractals and the Fourier filtering methods frequently used for stochastic cloud modeling, the proposed method is based on spectral models of homogeneous random fields. For keeping the same probability density function as the (first) original field, the method of inverse distribution function is used. When the spatial distribution of the first field has been generated, a realization of the correlated second field is simulated using a conditional distribution matrix. This paper is served as a theoretical justification to the publicly available software that has been recently released by the authors and can be freely downloaded from http://i3rc.gsfc.nasa.gov/Public codes clouds.htm. Though 2D rather than full 3D, stochastic realizations of two correlated cloud fields that mimic statistics of given fields have proved to be very useful to study 3D radiative transfer features of broken cumulus clouds for better understanding of shortwave radiation and interpretation of the remote sensing retrievals.

Prigarin, Sergei M.↗

NASA NTRS1995

A Green's function method for heavy ion beam transport

The use of Green's function has played a fundamental role in transport calculations for high-charge high-energy (HZE) ions. Two recent developments have greatly advanced the practical aspects of implementation of these methods. The first was the formulation of a closed-form solution as a multiple fragmentation perturbation series. The second was the effective summation of the closed-form solution through nonperturbative techniques. The nonperturbative methods have been recently extended to an inhomogeneous, two-layer transport media to simulate the lead scattering foil present in the Lawrence Berkeley Laboratories (LBL) biomedical beam line used for cancer therapy. Such inhomogeneous codes are necessary for astronaut shielding in space. The transport codes utilize the Langley Research Center atomic and nuclear database. Transport code and database evaluation are performed by comparison with experiments performed at the LBL Bevalac facility using 670 A MeV 20Ne and 600 A MeV 56Fe ion beams. The comparison with a time-of-flight and delta E detector measurement for the 20Ne beam and the plastic nuclear track detectors for 56Fe show agreement up to 35%-40% in water and aluminium targets, respectively.

NASA Discipline Radiation Health↗

NASA NTRS2005

Single-Scale Retinex Using Digital Signal Processors

The Retinex is an image enhancement algorithm that improves the brightness, contrast and sharpness of an image. It performs a non-linear spatial/spectral transform that provides simultaneous dynamic range compression and color constancy. It has been used for a wide variety of applications ranging from aviation safety to general purpose photography. Many potential applications require the use of Retinex processing at video frame rates. This is difficult to achieve with general purpose processors because the algorithm contains a large number of complex computations and data transfers. In addition, many of these applications also constrain the potential architectures to embedded processors to save power, weight and cost. Thus we have focused on digital signal processors (DSPs) and field programmable gate arrays (FPGAs) as potential solutions for real-time Retinex processing. In previous efforts we attained a 21 (full) frame per second (fps) processing rate for the single-scale monochromatic Retinex with a TMS320C6711 DSP operating at 150 MHz. This was achieved after several significant code improvements and optimizations. Since then we have migrated our design to the slightly more powerful TMS320C6713 DSP and the fixed point TMS320DM642 DSP. In this paper we briefly discuss the Retinex algorithm, the performance of the algorithm executing on the TMS320C6713 and the TMS320DM642, and compare the results with the TMS320C6711.

Hines, Glenn↗

NASA NTRS2018

A Summary of Results from Two Full-Scale Fokker F28 Fuselage Section Drop Tests

During 2017, two vertical drop tests were conducted on two partial sections removed from a Fokker F28 MK4000 aircraft as a part of a joint NASA / Federal Aviation Administration (FAA) effort to investigate the crashworthiness characteristics of Transport Category Aircraft, as defined by 14 Code of Federal Regulations, Part 25. The first test was a pure vertical drop test of a relatively uniform forward section, which included an underfloor area for luggage. The second test was a canted drop test onto a sloped surface of a portion of the fuselage representing the wingbox stiffened structure. In both tests, accelerometers were installed on the floor, seat track, luggage, and overhead bin to measure responses in the two airframe sections. In addition, ten Anthropomorphic Test Devices (ATDs, a.k.a. crash test dummies) were included in each test to measure the potential of onboard occupant injury. Self-contained data recorders, logging accelerations and rotational rates, were also used on the seat tracks and lower structure for evaluation as potential crash recording devices in future tests. Finally, the starboard side of each section was painted with a stochastic black and white speckle pattern for use in full field photogrammetric imaging techniques. The results collected show notable differences in the Forward and Wingbox Section responses. The Forward Section floor accelerations showed a relatively uniform response of approximately 7 g throughout the impact event. This section exhibited large amounts of subfloor crushing, floor stiffener failures and seat deformation upon impact. These results are contrasted by the Wingbox Section accelerations, which showed large differences when comparing accelerations recorded from either the rear or the front portion of the section reaching peaks of 39 g in some locations. Additionally, the Wingbox Section test induced a forward motion caused from the rotation at impact. With the exception of the lower cavity, there was minimal deformation in the Wingbox Section, and ATD responses were consistently higher than those for the Forward Section. A complete set of results are presented for the airframe, seat, ATD, overhead bin, and subfloor regions for each section. The ATD results are compared to current injury criteria, and determinations will be made on the likelihood of injury. Additional results for cargo-hold stored luggage are presented in an attempt to provide a component-level characterization for better understanding of under-floor loading. Finally, a discussion of the relevance of the results for a proposed airframe level crashworthiness guideline are presented.

Littell, Justin D.↗

NASA NTRS1994

Direct numerical simulations and modeling of a spatially-evolving turbulent wake

Understanding of turbulent free shear flows (wakes, jets, and mixing layers) is important, not only for scientific interest, but also because of their appearance in numerous practical applications. Turbulent wakes, in particular, have recently received increased attention by researchers at NASA Langley. The turbulent wake generated by a two-dimensional airfoil has been selected as the test-case for detailed high-resolution particle image velocimetry (PIV) experiments. This same wake has also been chosen to enhance NASA's turbulence modeling efforts. Over the past year, the author has completed several wake computations, while visiting NASA through the 1993 and 1994 ASEE summer programs, and also while on sabbatical leave during the 1993-94 academic year. These calculations have included two-equation (K-omega and K-epsilon) models, algebraic stress models (ASM), full Reynolds stress closure models, and direct numerical simulations (DNS). Recently, there has been mutually beneficial collaboration of the experimental and computational efforts. In fact, these projects have been chosen for joint presentation at the NASA Turbulence Peer Review, scheduled for September 1994. DNS calculations are presently underway for a turbulent wake at Re(sub theta) = 1000 and at a Mach number of 0.20. (Theta is the momentum thickness, which remains constant in the wake of a two dimensional body.) These calculations utilize a compressible DNS code written by M. M. Rai of NASA Ames, and modified for the wake by J. Cimbala. The code employs fifth-order accurate upwind-biased finite differencing for the convective terms, fourth-order accurate central differencing for the viscous terms, and an iterative-implicit time-integration scheme. The computational domain for these calculations starts at x/theta = 10, and extends to x/theta = 610. Fully developed turbulent wake profiles, obtained from experimental data from several wake generators, are supplied at the computational inlet, along with appropriate noise. After some adjustment period, the flow downstream of the inlet develops into a fully three-dimensional turbulent wake. Of particular interest in the present study is the far wake spreading rate and the self-similar mean and turbulence profiles. At the time of this writing, grid resolution studies are underway, and a code is being written to calculate turbulence statistics from these wake calculations; the statistics will be compared to those from the ongoing PIV wake measurements, those of previous experiments, and those predicted by the various turbulence models. These calculations will lead to significant long-term benefits for the turbulence modeling effort. In particular, quantities such as the pressure-strain correlation and the dissipation rate tensor can be easily calculated from the DNS results, whereas these quantities are nearly impossible to measure experimentally. Improvements to existing turbulence models (and development of new models) require knowledge about flow quantities such as these. Present turbulence models do a very good job at prediction of the shape of the mean velocity and Reynolds stress profiles in a turbulent wake, but significantly underpredict the magnitude of the stresses and the spreading rate of the wake. Thus, the turbulent wake is an ideal flow for turbulence modeling research. By careful comparison and analysis of each term in the modeled Reynolds stress equations, the DNS data can show where deficiencies in the models exist; improvements to the models can then be attempted.

Cimbala, John M.↗

NASA NTRS2002

The Physical Origin of Galaxy Morphologies and Scaling Laws

We propose a numerical study designed to interpret the origin and evolution of galaxy properties revealed by space- and ground-based imaging and spectroscopical surveys. Our aim is to unravel the physical processes responsible for the development of different galaxy morphologies and for the establishment of scaling laws such as the Tully-Fisher relation for spirals and the Fundamental Plane of ellipticals. In particular, we plan to address the following major topics: (1) The morphology and observability of protogalaxies, and in particular the relationship between primordial galaxies and the z approximately 3 'Ly-break' systems identified in the Hubble Deep Field and in ground-based searches; (2) The origin of the disk and spheroidal components in galaxies, the timing and mode of their assembly, the corresponding evolution in galaxy morphologies and its sensitivity to cosmological parameters; (3) The origin and redshift evolution of the scaling laws that link the mass, luminosity size, stellar content, and metal abundances of galaxies of different morphological types. This investigation will use state-of-the-art N-body/gasdynamical codes to provide a spatially resolved description of the galaxy formation process in hierarchically clustering universes. Coupled with population synthesis techniques. our models can be used to provide synthetic 'observations' that can be compared directly with observations of galaxies both nearby and at cosmologically significant distances. This study will thus provide insight into the nature of protogalaxies and into the formation process of galaxies like our own Milky Way. It will also help us to assess the cosmological significance of these observations within the context of hierarchical theories of galaxy formation and will supply a theoretical context within which current and future observations can be interpreted.

Steinmetz, Matthias↗

NASA NTRS2010

The Spatial Vision Tree: A Generic Pattern Recognition Engine- Scientific Foundations, Design Principles, and Preliminary Tree Design

New foundational ideas are used to define a novel approach to generic visual pattern recognition. These ideas proceed from the starting point of the intrinsic equivalence of noise reduction and pattern recognition when noise reduction is taken to its theoretical limit of explicit matched filtering. This led us to think of the logical extension of sparse coding using basis function transforms for both de-noising and pattern recognition to the full pattern specificity of a lexicon of matched filter pattern templates. A key hypothesis is that such a lexicon can be constructed and is, in fact, a generic visual alphabet of spatial vision. Hence it provides a tractable solution for the design of a generic pattern recognition engine. Here we present the key scientific ideas, the basic design principles which emerge from these ideas, and a preliminary design of the Spatial Vision Tree (SVT). The latter is based upon a cryptographic approach whereby we measure a large aggregate estimate of the frequency of occurrence (FOO) for each pattern. These distributions are employed together with Hamming distance criteria to design a two-tier tree. Then using information theory, these same FOO distributions are used to define a precise method for pattern representation. Finally the experimental performance of the preliminary SVT on computer generated test images and complex natural images is assessed.

Rahman, Zia-ur↗

NASA NTRS2018

NASA's GMAO Atmospheric Motion Vectors Simulator: Description and Application to the MISTiC Winds Concept

An atmospheric wind vectors (AMVs) simulator was developed by NASA's GMAO to simulate observations from future satellite constellation concepts. The synthetic AMVs can then be used in OSSEs to estimate and quantify the potential added value of new observations to the present Earth observing system and, ultimately, the expected impact on the current weather forecasting skill. The GMAO AMV simulator is a tunable and flexible computer code that is able to simulate AMVs expected to be derived from different instruments and satellite orbit configurations. As a case study and example of the usefulness of this tool, the GMAO AMV simulator was used to simulate AMVs envisioned to be provided by the MISTiC Winds, a NASA mission concept consisting of a constellation of satellites equipped with infrared spectral midwave spectrometers, expected to provide high spatial and temporal resolution temperature and humidity soundings of the troposphere that can be used to derive AMVs from the tracking of clouds and water vapor features. The GMAO AMV simulator identifies trackable clouds and water vapor features in the G5NR and employs a probabilistic function to draw a subset of the identified trackable features. Before the simulator is applied to the MISTiC Winds concept, the simulator was calibrated to yield realistic observations counts and spatial distributions and validated considering as a proxy instrument to the MISTiC Winds the Himawari-8 Advanced Imager (AHI). The simulated AHI AMVs showed a close match with the real AHI AMVs in terms of observation counts and spatial distributions, showing that the GMAO AMVs simulator synthesizes AMVs observations with enough quality and realism to produce a response from the DAS equivalent to the one produced with real observations. When applied to the MISTiC Winds scanning points, it can be expected that the MISTiC Winds will be able to collect approximately 60,000 wind observations every 6 hours, if considering a constellation composed of 12 satellites (4 orbital planes). In addition, one of the main expected impacts of the MISTiC Winds concept is the ability to derive water vapor feature tracking AMVs below 500-400 hPa, an unique feature among the water vapor AMVs derived from the current Earth observing system.

Carvalho, David↗

NASA NTRS2018

NASA's GMAO Atmospheric Motion Vectors Simulator: Description and Application to the MISTiC Winds Concept

Carvalho, David↗

NASA NTRS1994

Mineral identification and mapping of hydrothermal alteration zones using high-spectral resolution images (AVIRIS)

High-spectral resolution images (AVIRIS) of the cuprite mining area were used to evaluate atmospheric calibration algorithms and test several mineral mapping techniques. Four scene normalization techniques were used: (1) the flat-field method, (2) the internal average reflectance method, (3) the empirical line method, and (4) the atmospheric absorption removal method (ATREM). The algorithms were evaluated in terms of their spectral interpret- ability and their ability to remove both solar irradiance and atmospheric absorption features, noise, and artifacts. Noise was quantified by calculating the coefficient of variation of the spectra, and spectral interpretability was quantified by calcu- lating a difference spectrum (eg, laboratory spectrum minus pixel spectrum) for areas with known occurrences of clay minerals. These difference spectra were useful in evaluating the degree of removal of atmospheric features. The empirical line method produced the best calibration results. Mineral mapping as done using (1) color-composites of bands on the shoulders and centers of expected absorption features, (2) color-coded spectra, and (3) spectral angle mapping.

Van Der Meer, Freek D.↗

NASA NTRS1996

Geodata Modeling and Query in Geographic Information Systems

Geographic information systems (GIS) deal with collecting, modeling, man- aging, analyzing, and integrating spatial (locational) and non-spatial (attribute) data required for geographic applications. Examples of spatial data are digital maps, administrative boundaries, road networks, and those of non-spatial data are census counts, land elevations and soil characteristics. GIS shares common areas with a number of other disciplines such as computer- aided design, computer cartography, database management, and remote sensing. None of these disciplines however, can by themselves fully meet the requirements of a GIS application. Examples of such requirements include: the ability to use locational data to produce high quality plots, perform complex operations such as network analysis, enable spatial searching and overlay operations, support spatial analysis and modeling, and provide data management functions such as efficient storage, retrieval, and modification of large datasets; independence, integrity, and security of data; and concurrent access to multiple users. It is on the data management issues that we devote our discussions in this monograph. Traditionally, database management technology have been developed for business applications. Such applications require, among other things, capturing the data requirements of high-level business functions and developing machine- level implementations; supporting multiple views of data and yet providing integration that would minimize redundancy and maintain data integrity and security; providing a high-level language for data definition and manipulation; allowing concurrent access to multiple users; and processing user transactions in an efficient manner. The demands on database management systems have been for speed, reliability, efficiency, cost effectiveness, and user-friendliness. Significant progress have been made in all of these areas over the last two decades to the point that many generalized database platforms are now available for developing data intensive applications that run in real-time. While continuous improvement is still being made at a very fast-paced and competitive rate, new application areas such as computer aided design, image processing, VLSI design, and GIS have been identified by many as the next generation of database applications. These new application areas pose serious challenges to the currently available database technology. At the core of these challenges is the nature of data that is manipulated. In traditional database applications, the database objects do not have any spatial dimension, and as such, can be thought of as point data in a multi-dimensional space. For example, each instance of an entity EMPLOYEE will have a unique value corresponding to every attribute such as employee id, employee name, employee address and so on. Thus, every Employee instance can be thought of as a point in a multi-dimensional space where each dimension is represented by an attribute. Furthermore, all operations on such data are one-dimensional. Thus, users may retrieve all entities satisfying one or more constraints. Examples of such constraints include employees with addresses in a certain area code, or salaries within a certain range. Even though constraints can be specified on multiple attributes (dimensions), the search for such data is essentially orthogonal across these dimensions.

Adam, Nabil↗

NASA NTRS2019

Predictive Modeling for Differential Diagnosis and Mortality Risk Assessment

The prevalence of electronic health record (EHR) systems has brought prodigious biomedical informatics opportunity. Automated machine learning methods can effectively utilize such data and have become common tools for healthcare predictive modeling. Researches in medical informatics have explored the potential of deep learning and classical models in emergent care scenarios. In particular, predicting differential diagnoses for admissions have proven useful in decreasing unnecessary lab tests and improving inpatient triage decision-making. Moreover, identification of high-risk patients for in-hospital mortality is vitally important to maximize allocation of medical resources.The Medical Information Mart for Intensive Care (MIMIC-III) database, containing de-identified critical care inpatient was used in our study. This data set captures hospital patient laboratory measurements, pharmacologic prescriptions, diagnostic data and procedure event recordings. When considering adult patients and discounting admissions with ICU length of stay less than 24 hours, there were 37,787 unique admissions and 30,414 total patients. We examined the top 25 most prevalent ICD-9 group-level disease specificities in MIMIC-III using a multi-label classification model. In-hospital mortality was modeled as binary classification with 4,155 (13%) adult patients that expired, of which 3,138 (75.5%) were in the ICU setting. The metrics AUC, F1 score, sensitivity and specificity values calculated for each disease label measured prediction performance.The usage of ICD-9 group codes reduced feature dimension from 14,567 to 942 and greatly improved distribution of patient diagnostic categories. Disease temporal patterns were captured by considering the most frequently sampled 6 vital signs and 13 laboratory values. Missing data were imputed at each time-stamp. Time-series raw hourly average values were converted into 5 summary features (mean, standard deviation, number of observations, min & max values). Patient demographic variables such as age, gender, marital status and ethnicity were also factored into the modeling. Choi et al showed that contextual embedding of medical data, diagnostic and procedural codes alone can predict future diagnoses with sensitivity as high as 0.79. We utilized an embedding technique called word2vec which allowed sparse representations of medical history to be transformed into dense word vectors. The mappings captured contextual information by treating each admission as a sentence and learning the most likely neighboring words in a sliding window fashion. Binary and multi-label classification was achieved via collapse models, which do not consider temporal information, as well as recurrent neural networks with regularization, Softmax output layer activation together with categorical cross-entropy as the loss function.

US Army collaboration↗

NASA NTRS2021

Starshade Rendezvous: Exoplanet Sensitivity and Observing Strategy

Launching a starshade to rendezvous with the Nancy Grace Roman Space Telescope (Roman) would provide the first opportunity to directly image the habitable zones (HZs) of nearby sunlike stars in the coming decade. A report on the science and feasibility of such a mission was recently submitted to NASA as a probe study concept. The driving objective of the concept is to determine whether Earth-like exoplanets exist in the HZs of the nearest sunlike stars and have biosignature gases in their atmospheres. With the sensitivity provided by this telescope, it is possible to measure the brightness of zodiacal dust disks around the nearest sunlike stars and establish how their population compares with our own. In addition, known gas-giant exoplanets can be targeted to measure their atmospheric metallicity and thereby determine if the correlation with planet mass follows the trend observed in the Solar System and hinted at by exoplanet transit spectroscopy data. We provide the details of the calculations used to estimate the sensitivity of Roman with a starshade and describe the publicly available Python-based source code used to make these calculations. Given the fixed capability of Roman and the constrained observing windows inherent for the starshade, we calculate the sensitivity of the combined observatory to detect these three types of targets, and we present an overall observing strategy that enables us to achieve these objectives.

Andrew Frederic Romero-wolf↗