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At least 955 records · Page 53

Influence of urban extent discrepancy on the estimation of surface urban heat island intensity: A global-scale assessment in 892 cities

The estimation of surface urban heat island intensity (SUHII) is crucial for studying the urban thermal environment, which is influenced not only by the commonly known definition of rural reference but also by the delineation of urban extent. Existing studies relies on various urban extent products defined in different ways, and the influence of urban extent discrepancy (UED) on SUHII estimates still remains unclear. In this study, we collected five open-source global urban extent products (GUEPs) for the year 2015 and corresponding daily land surface temperature (LST) observations (MYD11A1). Based on these products, we quantified the UED-induced uncertainty in SUHII estimates by comparing absolute difference (ΔSUHII AD ) and relative difference (ΔSUHII RD ) in SUHII among GUEPs across 892 global cities. Additionally, we introduced an ISF-constrained (ISF–C) method to reduce SUHII differences among GUEPs by constraining the impervious surface fraction (ISF) within urban and rural extents. The results show that urban extents delineated by different GUEPs are not consistent, leading to their difference in ISF as well as LST, which in turn causes uncertainties in the estimated SUHII. On average for global cities, the annual daytime and nighttime ΔSUHII AD are 0.46 ± 0.02 °C (mean ± 95% confidence interval) and 0.24 ± 0.01 °C, with corresponding ΔSUHII RD of 42.0 ± 2.7% and 35.2 ± 2.3%, respectively. The UED-induced uncertainty in SUHII estimates varies among climate zones, and the annual daytime ΔSUHII RD averaged for cities located in the arid zone reaches up to 60.8 ± 6.6%, which is nearly twice as high as that in other climate zones. More importantly, both ΔSUHII AD and ΔSUHII RD show lower values when using the ISF-C method, implying the effectiveness of this method. This study highlights the non-negligible impact of UED on the estimation of SUHII, which requires more attention due to the inconsistency of urban extents among current products.

54 ENVIRONMENTAL SCIENCES↗

Sensitivity of the active neutron coincidence collar response during simulated and experimental fresh fuel assay

Verification of the fissile (and fertile) content in fresh nuclear fuel assemblies is conducted by the IAEA to enforce the Nuclear Non-Proliferation Treaty using the UNCL (Uranium Neutron Collar — Light Water Reactor Fuel). The UNCL uses an uncorrelated AmLi neutron source to interrogate the fuel, producing a signal of coincident fission neutrons (Doubles rate) used to assay 235 U content of the fuel. The cost of producing calibration assemblies and limited availability of diverse commercial assemblies at any one time historically restricted the ability to explore the full parameter space experimentally. Monte Carlo simulations can overcome this, but introduce additional sources of uncertainty. In this work, the sensitivity of simulations and measurements to various parameters is assessed for a reference 1616 PWR assembly of uniform 3.2% enrichment. Uncertainty contributions in this evaluation include: simulated AmLi neutron source spectrum, AmLi neutron emission rate, AmLi anisotropicity, high density polyethylene (HDPE) density, the precise position of the fuel assembly within the detector, and experimentally the statistical uncertainty. The overall total systematic uncertainty estimate for the simulation of the absolute/relative Doubles rates responses are estimated to be approximately 2.0%/1.5%, and for experimental measurements systematic uncertainty reduces to 1.1%. This analysis supports further work using the relative Doubles rates in place of measurements for updating and extending the UNCL analysis methodology as systematic uncertainty is reasonably small.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

X-ray and Optical Circular Dichroism as Local and Global Ultrafast Chiral Probes of [12]Helicene Racemization

Optical circular dichroism (OCD) is a well-established technique for probing molecular chirality typically in the UV-visible window. Although molecular chirality is usually related to a chiral center, it can alternatively describe a global structure. The electronic transitions are then delocalized and OCD is said to probe the global chirality. Recent advances controlling the polarization and spatial structure of X-ray beams have led to novel spectroscopic techniques such as X-ray circular dichroism (XCD), which can exploit the localized nature of the X-ray electronic transitions. XCD is thus sensitive to local structures and the relevant chirality probed with it can be referred as local. Here, we use the racemization mechanism of the [12]Helicene as a model to assess the capabilities of OCD and XCD as probes of global and local chiralities. In conclusion, our simulations suggest that XCD is a reliable spectroscopic technique for probing the local chirality of molecules, suggesting the further development of this experimental technique.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Quantitative Fit Evaluation of N95 Filtering Facepiece Respirators and Coronavirus Inactivation Following Heat Treatment

Abstract Reuse of filtering facepiece respirators (FFRs, commonly referred to as N95s) normally meant for single use has become common in healthcare facilities due to shortages caused by the COVID-19 pandemic. Here, we report that murine hepatitis coronavirus initially seeded on FFR filter material is inactivated (6 order of magnitude reduction as measured by median tissue culture infective dose, TCID50) after dry heating at 75°C for 30 min. We also find that the quantitative fit of FFRs after heat treatment at this temperature, under dry conditions or at 90% relative humidity, is not affected by single or 10 heating cycles. Previous studies have reported that the filtration efficiency of FFRs is not negatively impacted by these heating conditions. These results suggest that thermal inactivation of coronaviruses is a potentially rapid and widely deployable method to reuse N95 FFRs in emergency situations where reusing FFRs is a necessity and broad-spectrum sterilization is unavailable. However, we also observe that a radiative heat source (e.g. an exposed heating element) results in rapid qualitative degradation of the FFR. Finally, we discuss differences in the results reported here and other recent studies investigating heat as a means to recycle FFRs. These differences suggest that while our repeated decontamination cycles do not affect FFR fit, overall wear time and the number of donning/doffing cycles are important factors that likely degrade FFR fit and must be investigated further.

60 APPLIED LIFE SCIENCES↗

Whole-Genome Resequencing to Evaluate Life History Variation in Anadromous Migration of Oncorhynchus mykiss

Anadromous fish experience physiological modifications necessary to migrate between vastly different freshwater and marine environments, but some species such as Oncorhynchus mykiss demonstrate variation in life history strategies with some individuals remaining exclusively resident in freshwater, whereas others undergo anadromous migration. Because there is limited understanding of genes involved in this life history variation across populations of this species, we evaluated the genomic difference between known anadromous ( n = 39) and resident ( n = 78) Oncorhynchus mykiss collected from the Klickitat River, WA, USA, with whole-genome resequencing methods. Sequencing of these collections yielded 5.64 million single-nucleotide polymorphisms that were tested for significant differences between resident and anadromous groups along with previously identified candidate gene regions. Although a few regions of the genome were marginally significant, there was one region on chromosome Omy12 that provided the most consistent signal of association with anadromy near two annotated genes in the reference assembly: COP9 signalosome complex subunit 6 (CSN6) and NACHT, LRR, and PYD domain–containing protein 3 (NLRP3). Previously identified candidate genes for anadromy within the inversion region of chromosome Omy05 in coastal steelhead and rainbow trout were not informative for this population as shown in previous studies. Results indicate that the significant region on chromosome Omy12 may represent a minor effect gene for male anadromy and suggests that this life history variation in Oncorhynchus mykiss is more strongly driven by other mechanisms related to environmental rearing such as epigenetic modification, gene expression, and phenotypic plasticity. Further studies into regulatory mechanisms of this trait are needed to understand drivers of anadromy in populations of this protected species.

Collins, Erin E.↗

Model calibration of the liquid mercury spallation target using evolutionary neural networks and sparse polynomial expansions

The mercury constitutive model predicting the strain and stress in the target vessel plays a central role in improving the lifetime prediction and future target designs of the mercury targets at the Spallation Neutron Source. We leverage the experiment strain data collected over multiple years to improve the mercury constitutive model through a combination of large scale simulations of the target behavior and the use of machine learning tools for parameter estimation. We present two interdisciplinary approaches for surrogate-based model calibration of expensive simulations using evolutionary neural networks and sparse polynomial expansions. The newly calibrated simulations achieve 7% average improvement on the prediction accuracy and 8% reduction in mean absolute error compared to previously reported reference parameters, with some individual sensors experiencing up to 30% improvement. The calibrated simulations can aid in fatigue analysis to estimate the mercury target lifetime, which reduces abrupt failure and saves tremendous amount of costs.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Hybridizing pseudo-Hamiltonians and non-local pseudopotentials in diffusion Monte Carlo

An accurate treatment of effective core potentials (ECPs) requires care in continuum quantum Monte Carlo (QMC) methods. While most QMC studies have settled on the use of familiar non-local (NL) pseudopotentials with additional localization approximations, these approaches have been shown to result in moderate residual errors for some classes of molecular and solid state applications. Here, we revisit an idea proposed early in the history of QMC ECPs that does not require localization approximations, namely, a differential class of potentials referred to as pseudo-Hamiltonians. We propose to hybridize NL potentials and pseudo-Hamiltonians to reduce residual non-locality of existing potentials. We derive an approach to recast pseudopotentials for 3d elements as hybrid pseudo-Hamiltonians with optimally reduced NL energy. We demonstrate the fidelity of the hybrid potentials by studying atomic ionization potentials of Ti and Fe and the binding properties of TiO and FeO molecules with diffusion Monte Carlo (DMC). We show that localization errors have been reduced relative to potentials with the same NL channels for Sc–Zn by considering the DMC energy change with respect to the choice of approximate localization. While localization error decreases proportionate to the reduced NL energy without a Jastrow, with a Jastrow, the degree of reduction decreases at higher filling of the d-shell. Our results suggest that a subset of existing ECPs may be recast in this hybrid form to reduce the DMC localization error. They also point to the prospect of further reducing this error by generating ECPs within this hybrid form from the start.

36 MATERIALS SCIENCE↗

Defect suppression in wet-treated etched-and-regrown nonpolar m-plane GaN vertical Schottky diodes: A deep-level optical spectroscopy analysis

In this work, steady-state photocapacitance (SSPC) was conducted on nonpolar m-plane GaN n-type Schottky diodes to evaluate the defects induced by inductively coupled plasma (ICP) dry etching in etched-and-regrown unipolar structures. An ~10× increase in the near-midgap Ec – 1.9 eV level compared to an as-grown material was observed. Defect levels associated with regrowth without an etch were also investigated. The defects in the regrown structure (without an etch) are highly spatially localized to the regrowth interface. Subsequently, by depth profiling an etched-and-regrown sample, we show that the intensities of the defect-related SSPC features associated with dry etching depend strongly on the depth away from the regrowth interface, which is also reported previously. A photoelectrochemical etching (PEC) method and a wet AZ400K treatment are also introduced to reduce the etch-induced deep levels. A significant reduction in the density of deep levels is observed in the sample that was treated with PEC etching after dry etching and prior to regrowth. An ~2× reduction in the density of Ec – 1.9 eV level compared to a reference etched-and-regrown structure was observed upon the application of PEC etching treatment prior to the regrowth. The PEC etching method is promising for reducing defects in selective-area doping for vertical power switching structures with complex geometries.

36 MATERIALS SCIENCE↗

Adapting Nuclear Forensics from Light Water to Molten Salt Reactors: A Survey of Emerging Needs

Rising interest in molten salt reactors for commercial power production presents an opportunity to evaluate the techniques used to characterize materials of nuclear forensic interest. Since extensive research has been performed to identify and develop signatures of light water reactor (LWR) materials (e.g. uranium ore concentrates and uranium dioxide fuel pellets), we use this as a basis to explore possibilities for molten salt signature development. Through this comparative method, nuclear forensic signatures used today to identify the provenance of nuclear materials found out of regulatory control are adapted to molten salt reactor (MSR) fuel cycle materials. Radiological, elemental composition, isotopic composition, and model age signatures will likely not need large adaptations before being applied to MSR materials but may need to expand to be applicable to both thorium- and uranium-fueled systems. The liquid nature of molten salt fuel may erase signatures related to production and irradiation history that are informative for typical LWR materials. However, it may also lead to opportunities for new signatures, such as cooling rate–controlled morphology. Targets identified for further research include radiological attributes of fuel salts; elemental, chemical, and isotopic analysis of salts with differing production routes; morphological effects of various thermodynamic environments; and relevant fuel cycle radiochronometers. Additionally, the comparative nature of the proposed signatures implies a need for MSR-relevant databases and the production of salt standard reference materials.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Probing the angular and polarization reconstruction of the ARIANNA detector at the South Pole

The sources of ultra-high energy (UHE) cosmic rays, which can have energies up to 10 20 eV, remain a mystery. UHE neutrinos may provide important clues to understanding the nature of cosmic-ray sources. ARIANNA aims to detect UHE neutrinos via radio (Askaryan) emission from particle showers when a neutrino interacts with ice, which is an efficient method for neutrinos with energies between 10 16 eV and 10 20 eV. The ARIANNA radio detectors are located in Antarctic ice just beneath the surface. Neutrino observation requires that radio pulses propagate to the antennas at the surface with minimum distortion by the ice and firn medium. Using the residual hole from the South Pole Ice Core Project, radio pulses were emitted from a transmitter located up to 1.7 km below the snow surface. By measuring these signals with an ARIANNA surface station, the angular and polarization reconstruction abilities are quantified, which are required to measure the direction of the neutrino. After deconvolving the raw signals for the detector response and attenuation from propagation through the ice, the signal pulses show no significant distortion and agree with a reference measurement of the emitter made in an anechoic chamber. Furthermore, the signal pulses reveal no significant birefringence for our tested geometry of mostly vertical ice propagation. The origin of the transmitted radio pulse was measured with an angular resolution of 0.37° indicating that the neutrino direction can be determined with good precision if the polarization of the radio-pulse can be well determined. In this work, we obtained a resolution of the polarization vector of 2.7°. Neither measurement show a significant offset relative to expectation.

47 OTHER INSTRUMENTATION↗

Anisotropic neutron response of trans-stilbene and impact on a handheld dual particle imager

Here this manuscript details measurements of the anisotropic light-output response of trans-stilbene, henceforth referred to as stilbene, along the three primary crystal planes and analyzes how this anisotropic response impacts neutron image reconstruction in a handheld dual particle imager (H2DPI). A prototype H2DPI composed of stilbene pillars (6 x 6 x 50 mm 3 ) coupled to silicon photomultipliers was built and is capable of imaging both fast neutrons and gamma rays from kilogram quantities of special nuclear material. Stilbene was chosen as the scintillating medium for the imager because of its pulse shape discrimination capability, time resolution and relatively high light output. A drawback to using stilbene, however, is the anisotropic response. A recoiling proton from a neutron elastic-scattering event in stilbene will yield different amounts of scintillation light depending on the direction of the recoiling proton with respect to the crystal lattice. This manuscript analyzes how this anisotropic response impacts neutron image reconstruction in 4π. The light output in the three primary crystal planes of stilbene were independently measured 6–7 times for proton recoil energies ranging from 0.5–5.0 MeV using a quasi-monoenergetic time-of-flight neutron source. The measured light-output data in the three crystal planes were fit with a semi-empirical function based on Birks’ formula. These fits were used to reconstruct the location of a 252 Cf source in front of the imager (0°, -0.8°), to the left of the imager (-90°, -0.8°) and directly above the imager (0°, 90°) to determine if it is necessary to apply the directionally-dependent response of stilbene to accurately reconstruct source locations. A bootstrapping technique was applied to the measured data sets to produce 1000 images composed of 2000 cone projections for each source location and each measured light-output curve. List-mode maximum likelihood expectation maximization was applied to each image; the highest pixel location and the full width at half maximum (FWHM) were then recorded. The average and standard deviations of these parameters were taken for each set of images. The maximum difference in the average azimuthal pixel location when varying between the appropriate and incorrect light-output curves for the source locations at (0°, -0.8°) and (-90°, -0.8°) were respectively found to be 1.85 ± 1.39° and 2.03 ± 1.78°. All other pixel locations and FWHMs were within a single standard deviation of uncertainty. Taken together, the anisotropic response of stilbene has negligible impact on the neutron image reconstruction capability of the H2DPI.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Transforming Science Through Software: Improving While Delivering 100×

The U.S. Department of Energy (DOE) Exascale Computing Project (ECP) funded the development of new (and the transformation of important existing) applications, libraries, and tools that realized improvement in performance and capabilities of often 100 times or more on emerging exascale computers. This exceptional gain inspired the title of this special issue: Transforming Science through Software: Improving while delivering 100X. The term 100X refers to advancing capabilities in modeling, simulation, and analysis by a factor of 100 or more using some combination of new algorithms, optimization techniques, software libraries, and programming models, coupled with the next generation of hardware for high-performance computing (HPC). The papers in this issue share experiences with the practice and science of scientific software development, with an emphasis on developing a coherent, portable, and sustainable HPC software ecosystem for next-generation computational science. Finally, we hope to foster expanded community efforts related to the fundamental role of sustainable scientific software ecosystems in advancing the computing sciences.

97 MATHEMATICS AND COMPUTING↗

Artificial Judgement Assistance from teXt (AJAX): Applying Open Domain Question Answering to Nuclear Non-proliferation Analysis

Nuclear non-proliferation analysis is complex and subjective, as the data is sparse, and examples are rare and diverse. While analysing non-proliferation data, it is often desired that the findings be completely auditable such that any claim or assertion can be sourced directly to the reference material from which it was derived. Currently this is accomplished by analysts thoroughly documenting underlying assumptions and clearly referencing details to source documents. This is a labour-intensive and time-consuming process that can be difficult to scale with geometrically increasing quantities of data. In this work, we describe an approach to leverage bi-directional language models for nuclear non-proliferation analysis. It has been shown recently that these models not only capture language syntax but also some of the relational knowledge present in the training data. We have devised a unique Salt and Pepper strategy for testing the knowledge present in the language models, while also introducing auditability function in our pipeline. We demonstrate that fine-tuning the bi-directional language models on domain specific corpus improves their ability to answer domain-specific factoid questions. Our hope is that the results presented in this paper will further the natural language processing (NLP) field by introducing the ability to audit the answers provided by the language models to bring forward the source of said knowledge.

98 NUCLEAR DISARMAMENT, SAFEGUARDS, AND PHYSICAL P↗

CreA-mediated repression of gene expression occurs at low monosaccharide levels during fungal plant biomass conversion in a time and substrate dependent manner

Carbon catabolite repression enables fungi to utilize the most favourable carbon source in the environment, and is mediated by a key regulator, CreA, in most fungi. CreA-mediated regulation has mainly been studied at high monosaccharide concentrations, an uncommon situation in most natural biotopes. In nature, many fungi rely on plant biomass as their major carbon source by producing enzymes to degrade plant cell wall polysaccharides into metabolizable sugars. To determine the role of CreA when fungi grow in more natural conditions and in particular with respect to degradation and conversion of plant cell walls, we compared transcriptomes of a creA deletion and reference strain of the ascomycete Aspergillus niger during growth on sugar beet pulp and wheat bran. Transcriptomics, extracellular sugar concentrations and growth profiling of A. niger on a variety of carbon sources, revealed that also under conditions with low concentrations of free monosaccharides, CreA has a major effect on gene expression in a strong time and substrate composition dependent manner. In addition, we compared the CreA regulon from five fungi during their growth on crude plant biomass or cellulose. It showed that CreA commonly regulated genes related to carbon metabolism, sugar transport and plant cell wall degrading enzymes across different species. We therefore conclude that CreA has a crucial role for fungi also in adapting to low sugar concentrations as occurring in their natural biotopes, which is supported by the presence of CreA orthologs in nearly all fungi.

59 BASIC BIOLOGICAL SCIENCES↗

High-Fidelity Simulation of the Light-to-Dense Stratification Transient in the HiRJET Facility

Density stratification in a large enclosure is a crucial phenomenon to heat transfer and sustainable passive heat removal of a sodium fast reactor during reactivity transients. However, engineering turbulence models were identified to have unsatisfactory performance in predicting propagation of a stratified front. Yet, the scarcity of high-resolution data for stratification hampers the development of models. To explor e applications of leveraging direct numerical simulation (DNS) data to support turbulence model development, this work conducted DNS using NekRS to study a long stratification transient in the High-Resolution Jet (HiRJET) experimental facility. Here, this work considers an experiment run where light fluid is injected into a tank containing a denser fluid with a relative density difference of 1.5%. Formation of the stratified layer is identified as impingement of the buoyant jet promoting mixing of the two fluids. Based on the transient statistics, transport of the concentration can be characterized by regions with dominating effects of turbulent mixing, buoyant dissipation, and molecular diffusion, respectively, as moving away from the elevation of jet impingement. Concentration near the stratified front also exhibits oscillation at Brunt-Väisälä frequency. Preliminary validation of the simulation showed encouraging agreement of the concentration distribution with the reference experiment.

buoyant mixing↗

Friction in a strongly magnetized neutral plasma

A charged projectile generates an electrostatic wake as it moves through a background plasma. This wake normally gives rise to a drag force that acts antiparallel to the velocity vector of the projectile, and is commonly referred to as the stopping power. A recent theory predicted that an additional component of the friction force that is perpendicular to both the projectile velocity and the Lorentz force arises when a plasma is strongly magnetized. We extend the previous analysis of this transverse friction force, which was based on the one-component plasma model, to treat a two-component charge-neutral electron-ion plasma. The direction and magnitude of the transverse force is found to depend on the projectile speed relative to the electron and ion thermal velocities, and to change sign three times. For projectile speeds below a certain threshold, the transverse force is dominated by collisions with ions, while above this threshold, only electron collisions contribute. Here, the average trajectory of the projectile is significantly altered by the transverse force as it slows.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Use of imaging and mass spectrometry-based capabilities to describe microbiome interactions (Q4 Performance Metric Report, 2021)

The LLNL “Microbes Persist” Soil Microbiome Scientific Focus Area (SFA) seeks to determine how microbial soil ecophysiology, population dynamics, and microbe-mineral-organic matter interactions regulate the persistence of microbial residues and formation of soil carbon (C). In much of our research, we use imaging, mass spectrometry, and related methods to study plantmicrobe-mineral interactions, viral and microbial particles from soil, and the signatures plant and microbial necromass contribute as part of soil organic matter (SOM). Our project’s signature techniques include NanoSIMS-enabled approaches (to understand cell-cell and OM-mineral interactions at the single cell and even viral particle scale), radiocarbon (14C) analyses (to determine both the age and turnover time of soil organic matter), and a suite of soil chemical characterization techniques we describe below, and collectively refer to as ‘Multi- dimensional SOM-mineral characterization’ (SEM, TEM, STXM, NEXAFS, NMR, FTICR-MS, LC-MS). In this report, we focus on how imaging, NMR, beamline and mass spectrometry approaches can deepen our understanding of soil microbiomes and their engagement with the soil matrix.

54 ENVIRONMENTAL SCIENCES↗

GridPIQ Reference Data

GridPIQ uses dozens of publicly available datasets to provide context for a user's grid project, as well as defaults for users to choose from. Users can choose to import their own data to better customize their analysis or use GridPIQ-supplied defaults. This allows users to get up and running with an analysis very quickly without having to spend significant time pulling together input data. To run an electric vehicle (EV) smart charging project, a user will need to provide or select from prepopulated values for the regional load profile shape and peak load, region of interest and closest weather station, EV charging profile, number of EVs to add for the analysis, maximum EV charging power, location of chargers relative to grid infrastructure, and allowable charging times (for coordinated charging mode). The outputs of the analysis are changes in air quality, EV energy consumption, EV peak demand, and EV hourly consumption profile—before and after project implementation." For a detailed description of the tool methodology, including all the publicly available datasets used by the tool, see the [GridPIQ documentation](https://gridpiq.pnnl.gov/v2-beta/doc/).

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗