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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 955 records · Page 53
All sourcesNASA NTRSDOE OSTI
DOE OSTI2019

Complete Assembly of Circular and Chloroplast Genomes Based on Global Optimization

This paper focuses on the last two stages of genome assembly, namely scaffolding and gap-filling, and shows that they can be solved as part of a single optimization problem. Our approach is based on modeling genome assembly as a problem of finding a simple path in a specific graph that satisfies as many as possible of the distance constraints encoding the insert-size information. We formulate it as a mixed-integer linear programming problem and apply an optimization solver to find the exact solutions on a benchmark of chloroplasts. We show that the presence of repetitions in the set of unitigs is the main reason for the existence of multiple equivalent solutions that are associated to alternative subpaths. We also describe two sufficient conditions and we design efficient algorithms for identifying these subpaths. Comparisons of the results achieved by our tool with the ones obtained with recent assemblers are presented.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2025

Metagenome-assembled genomes from topsoils along a hillslope water gradient across early snowmelt to late summer in East River, CO

Drought is changing the American Mountain West at unprecedented rates with unknown consequences to soil microbiome composition and function. As a part of LBNL Watershed Science Focus Area (SFA), we investigated shifts in microbial community and transcriptional activity on a subalpine conifer-meadow transition zone throughout the summer of 2023 as soil dried down. This work took place in Crested Butte, CO on Snodgrass mountain, using a proxy for drought conditions.Here we present metagenome assembled genomes (MAGs) for the bacterial and archaeal community at 0-10cm from three sites along a hillslope water gradient across five timepoints from early snowmelt to late summer. 42 metagenomes were sequenced at Joint Genome Institute (JGI) and can be found under the JGI GOLD (Genomes Online Database) sequencing project Gs0166660. Metagenomes were assembled through an inhouse pipeline (see methods), binned using four autobinners (concoct, maxbin2, metabat2, and vamb) and consolidated using dastool. The consolidated bins from all metagenomes were pooled, filtered by completeness (>70%) and contamination (<10%), and dereplicated at 95% ANI using drep. This dataset (1) a zip file of 157 MAGs (as fasta files, Gs0166660_bins_tar.gz), (2) sample metadata file with sample IGSNs (International Generic Sample Numbers) (samples.csv), (3) bounding box coordinates for the sampled locations (Gs0166660.kml), (4) metagenome assembly and coassembly metadata file listing IMG/M (Integrated Microbial Genomes/Metagenomes) metagenome accessions linking samples to metagenomes (EastRiver_Drought_ESSDive_Metadata.csv), (5) location metadata file (locations.csv), (6) file-level metadata file (flmd.csv) and (7) data dictionary (dd.csv) file.This work was supported by the Watershed Function Science Focus Area at Lawrence Berkeley National Laboratory funded by the US Department of Energy, Office of Science, Biological and Environmental Research under Contract No. DE-AC02-05CH11231.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2017

Manufacturing of Low Cost, Durable Membrane Electrode Assemblies Engineered for Rapid Conditioning

Over the past 20 years significant progress in membrane-electrode assembly (MEA) technology development for polymer electrolyte fuel cells (PEMFCs) has resulted in the PEMFC technology approaching a commercial reality for transportation applications. However, there remain two primary technical challenges to be addressed in the MEA. First and foremost is meeting the automotive cost targets: Producing a fuel cell stack cost competitive with today’s internal combustion engine. In addition to the material cost, MEA (and other components) and stack assembly production methods must be amenable for use in low cost, high speed, automotive assembly line. One impediment to this latter goal is that stack components must currently go through a long and tedious conditioning procedure before they produce optimal power. This so-called “break-in” can take many hours, and can involve quite complex voltage, temperature and/or pressure steps. These break-in procedures must be simplified and the time required reduced if fuel cells are to become a viable automotive engine. The second challenge is to achieve the durability targets in real-world automotive duty cycle operations. Significant improvements in cost, break-in time, and durability for the key component of fuel cell stacks, MEAs were achieved in this project. Advanced modeling was used to guide design of the new MEA to maximize performance and durability. A new, innovative process and manufacturing approach utilizing direct in-line coating using scalable, cost-competitive, continuous high volume 3-layer rolled-good manufacturing processes was developed and validated by single cell and short stack testing. In addition, the direct coating methods employed were shown to reduce the cost for sacrificial films. Furthermore, Gore has demonstrated a 10 µm reinforced membrane that is used in the new low-cost process and can meet automotive power density and durability targets. Across a wide range of operating conditions, the direct-coated MEA outperformed the commercial baseline MEA, and did so through a process that delivers MEAs at $92.35/m2 at a volume of 500,000 systems per year, according to Strategic Analysis (SA) estimates.

08 HYDROGEN↗
DOE OSTI2021

Controlled synthesis and ordered assembly of Co 3 O 4 nanowires using genetically engineered bacterial flagella as biotemplates (Final Technical Report)

The major goals of the project are to gain a fundamental understanding on the influence of the displayed peptides and other processing parameters on the flagella assembly and the resulting biomimetic control over the synthesis and assembly of Co 3 O 4 nanoparticles (NPs) and nanowires (NWs). To pursue these goals, we designed two specific aims: Aim 1: Understanding the self-assembly of genetically engineered flagella and its outcome for site-specific nucleation and growth of Co 3 O 4 NPs and NWs. Aim 2: Understanding controllable alignment of 1D Co 3 O 4 -flagella NWs into highly ordered 2D and 3D structures.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2019

16S rRNA Amplicon sequence data and community assembly process file

Soils along a salinity gradient from a coastal forested floodplain (Beaver Creek in Western Washington) were analyzed for their microbial community composition and community assembly processes. These files contain processed 16S rRNA amplicon sequences into OTU table, the corresponding tree file, metadata, community assembly process analysis and results, microbial phyla abundances, and codes evaluating BNTI indices and community assembly process estimates.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2023

1,8-Dihydroxy Naphthalene—A New Building Block for the Self-Assembly with Boronic Acids and 4,4′-Bipyridine to Stable Host–Guest Complexes with Aromatic Hydrocarbons

The new Lewis acid–base adducts of general formula X(nad)B←NC5H4-C5H4N→B(nad)X [nad = 1,8-O2C10H6, X = C6H5 (2c), 3,4,5-F3-C6H2 (2d)] were synthesized in high yields via reactions of 1,8-dihydroxy naphthalene [nadH2] and 4,4′-bipyridine with the aryl boronic acids C6H5B(OH)2 and 3,4,5-F3-C6H2B(OH)2, respectively, and structurally characterized by multi-nuclear NMR spectroscopy and SCXRD. Self-assembled H-shaped Lewis acid–base adduct 2d proved to be effective in forming thermally stable host–guest complexes, 2d × solvent, with aromatic hydrocarbon solvents such as benzene, toluene, mesitylene, aniline, and m-, p-, and o-xylene. Crystallographic analysis of these solvent adducts revealed host–guest interactions to primarily occur via π···π contacts between the 4,4′-bipyridyl linker and the aromatic solvents, resulting in the formation of 1:1 and 1:2 host–guest complexes. Thermogravimetric analysis of the isolated complexes 2d × solvent revealed their high thermal stability with peak temperatures associated with the loss of solvent ranging from 122 to 147 °C. 2d, when self-assembled in an equimolar mixture of m-, p-, and o-xylene (1:1:1), preferentially binds to o-xylene. Collectively, these results demonstrate the ability of 1,8-dihydroxy naphthalene to serve as an effective building block in the selective self-assembly to supramolecular aggregates through dative covalent N→B bonds.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2024

Assembly and Repair of Photosystem II in Chlamydomonas reinhardtii

Oxygenic photosynthetic organisms use Photosystem II (PSII) to oxidize water and reduce plastoquinone. Here, we review the mechanisms by which PSII is assembled and turned over in the model green alga Chlamydomonas reinhardtii. This species has been used to make key discoveries in PSII research due to its metabolic flexibility and amenability to genetic approaches. PSII subunits originate from both nuclear and chloroplastic gene products in Chlamydomonas. Nuclear-encoded PSII subunits are transported into the chloroplast and chloroplast-encoded PSII subunits are translated by a coordinated mechanism. Active PSII dimers are built from discrete reaction center complexes in a process facilitated by assembly factors. The phosphorylation of core subunits affects supercomplex formation and localization within the thylakoid network. Proteolysis primarily targets the D1 subunit, which when replaced, allows PSII to be reactivated and completes a repair cycle. While PSII has been extensively studied using Chlamydomonas as a model species, important questions remain about its assembly and repair which are presented here.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2019

Dynamic Self-Assembly of Polyelectrolyte Composite Nanomaterial Film

The aim of this study is not only to investigate the feasibility of using PAH (polyallylamine hydrochloride) and PSS (poly styrene-4-sulfonic acid sodium salt) to prepare a film via a layer by layer self-assembly process entrained with silver nanoparticles, but also to show that the silver nanoparticles crystalline structure can be defined and deposited on the surface of the substrate in the desired alignment structure and manner, which is of great help to research on the LBL method in the cellulose field. The effect of outermost layer variation, assembly layers, and composition of multilayers on the formation of the LBL structure on a nanofibrillated cellulose (NFC)/polyvinyl alcohol (PVA) substrate was investigated. The deposition of PAH and PSS was monitored by Fourier-transform infrared spectroscopy (FT-IR). The morphology of the LBL film layers was observed by scanning electron microscope (SEM) and atomic force microscope (AFM). Furthermore, thermal degradation properties were investigated by thermogravimetric analysis (TGA), and physical properties of multilayer films were tested by a universal mechanical tester. The results reveal that PAH and PSS can be readily deposited on a NFC/PVA substrate by using LBL methodology to prepare self-assembled polyelectrolyte multilayer films. The surface morphology of the LBL composite changed from negative to positive charged depending on the final LBL treatment. Also, according to SEM and AFM analysis, silver nanoparticles were well dispersed in the (PAH/PSS) film, which significantly improved the thermal stability of the composite films.

36 MATERIALS SCIENCE↗
NASA NTRS2003

Metrics for in-space telescope assembly techniques

Reliable metrics are not yet available for choosing among human and robotic assets for space-based construction and servicing of large space telescopes. Using FAIR-DART as a reference design, we generated example event sequences for telescope assembly scenarios in enough detail to identify infrastructure assumptions and technology requirements. A systems trade among human and robotic techniques (human EVA, on-site telerobotic, ground-in-the- loop robotic, commanded or sequenced robotic, and autonomous/decision-making robotic) helped us to define key metrics in the human-robotic trade space, including quality, time, cost, and risk. Our methodology included examining representative end-member scenarios. Case A treated each step in the assembly sequence as if all other steps have no on-site human involvement, and Case B treated each step as if human EVA is already involved in all other steps. With this trade, we identified key enabling technologies and infrastructure for space-based assembly and servicing of large space telescopes.

space telescopes human and robotic in-space assemb↗
NASA NTRS2016

System Design and Implementation of the Detector Assembly of the Astro-H Soft X-Ray Spectrometer

The soft x-ray spectrometer (SXS) onboard Astro-H presents to the science community unprecedented capability (less than 7 eV at 6 keV) for high-resolution spectral measurements in the range of 0.5-12 keV to study extended celestial sources. At the heart of this SXS is the x-ray calorimeter spectrometer (XCS) where detectors (calorimeter array and anticoincidence detector) operate at 50 mK, the bias circuit operates at nominal 1.3 K, and the first stage amplifiers operateat 130 K, all within a nominal 20 cm envelope. The design of the detector assembly in this XCS originates from the Astro-E x-ray spectrometer (XRS) and lessons learned from Astro-E and Suzaku. After the production of our engineering model, additional changes were made in order to improve our flight assembly process for better reliability and overall performance. In this poster, we present the final design and implementation of the flight detector assembly, show comparison of parameters and performance to Suzakus XRS, and list susceptibilities to other subsystems as well as our lessons learned.

soft x-ray spectrometer↗
NASA NTRS2021

Inertial Transfer Concept for Autonomous In-Space Assembly

Rocket payload and fairing size have placed strict mass and volume limitations on single launch in-space structures. These limitations are what motivates In-Space Assembly (ISA)and where Inertial Transfer has potential to improve or augment ISA capabilities by utilizing an efficient multi-agent autonomous system to transport untethered payloads. Adoption of an inertial transfer approach significantly reduces system complexity, energy and time needed for assembly compared to conventional ISA capabilities, increasing the likelihood of early adoption for assembly. The Inertial Transfer concept is presented including autonomy capabilities, potential risks, and three system configurations. These configurations are based on the autonomous system’s available sensor coverage that tracks the payload’s state. Participating agents have well-defined roles, expectations, and assumptions in their physical organization and coordination of actions depending the mode of operation. The sensor information available to participating agents is considered as it affects the uncertainty in the estimated state and theactions required to capture the payload.

Multi-Agent↗
NASA NTRS2023

Tall Lunar Tower: An Autonomously Assembled Tower for Early Lunar Infrastructure

The Tall Lunar Tower (TLT) In-Space Assembly (ISA) team aims to design, model, fabricate, autonomously assemble, and characterize a TLT engineering development unit (EDU). The autonomous assembly of a tower also demonstrates a cross-cutting technology that can be applied to other lunar structures, such as blast shields, radiation shelters, and safe havens.

In-Space Assembly↗
NASA NTRSDate not supplied

Hardware-in-the-Loop Simulation of Modular Antenna Assembly

Robots are playing an increasing role in space exploration and in-space servicing. Robotic arms are good for performing in-space tasks such as modular assembly. The SPIDER arm (SPace Infrastructure Dexterous Robot) of the OSAM-1 mission represents an example of a system that can perform modular antenna assembly tasks in environmental conditions that would be dangerous for astronauts. One of the WVRTC activities is to perform independent verification and validation of the SPIDER assembly operations.

Space Assembly↗
DOE OSTI2017

Study on Neutronics Calculation Method of SCWR with Annular Fuel Assembly

Supercritical Water-Cooled Reactor (SCWR) is one of Gen-IV reactor systems for its advantages over LWRs, such as high thermal efficiency, simplified reactor system and economics. Annular fuel was proposed by MIT to supplant conventional solid fuel and improve power density in LWRs. Annular fuel is cooled from both inside and outside of the fuel. Thus a lower fuel temperature and cladding surface temperature can be achieved with higher power density. SCWRs will benefit from this advantage because high cladding temperature (usually over 650 degree C) is one challenge of SCWRs. Using annular fuel in SCWRs is very promising. This is also because the inner hole of the annual fuel can provide extra neutron moderation. Supercritical water density is too low to provide enough moderation. Different analysis codes have been developed all over the world to carry out SCWR pre-conceptual core design. Yamaji et al. developed SRAC/ASMBURN/COREBN to study Japan version of SCWR. Monti et al. used ERANOS to analyze HPLWR (High Performance Light Water Reactor). WIMS-D4/CITATION was also used to calculate HPLWR by Tashakor et al.. These codes employ a two-step method used in PWRs calculation. Lattice/Assembly calculation is carried out as the first step. In the second step, few group constant of different fuel assembly types is then used in core calculation. MCNP had also been used to study SCWR by Watta et al.. Due to large computation time cost, it's used mostly to analyze fuel assembly or core performance rather than pre-conceptual design, in which much optimization is needed. In this research, a neutronics calculation code for SCWR is developed using two-step method. This code is verified by comparing with Monte-Carlo code. Fuel assembly homogenization method is studied to improve the code accuracy.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗
DOE OSTI2022

Grain‐Boundary‐Rich Noble Metal Nanoparticle Assemblies: Synthesis, Characterization, and Reactivity

Abstract Here, a comprehensive study on the synthesis, characterization, and reactivity of grain‐boundary (GB)‐rich noble metal nanoparticle (NP) assemblies is presented. A facile and scalable synthesis of Pt, Pd, Au, Ag, and Rh NP assemblies is developed, in which NPs are predominantly connected via Σ3 (111) twin GBs, forming a network. Driven by water electrolysis, the random collisions and oriented attachment of colloidal NPs in solution lead to the formation of Σ3 (111) twin boundaries and some highly mismatched GBs. This synthetic method also provides convenient control over the GB density without altering the crystallite size or GB type by varying the NP collision frequency. The structural characterization reveals the presence of localized tensile strain at the GB sites. The ultrahigh activity of GB‐rich Pt NP assembly toward catalytic hydrogen oxidation in air is demonstrated, enabling room‐temperature catalytic hydrogen sensing for the first time. Finally, density functional theory calculations reveal that the strained Σ3(111) twin boundary facilitates oxygen dissociation, drastically enhancing the hydrogen oxidation rate via the dissociative pathway. This reported large‐scale synthesis of the Σ3 (111) twin GB‐rich structures enables the development of a broad range of high‐performance GB‐rich catalysts.

Geng, Xin↗
DOE OSTI2022

Self‐Assembled LuFeO 3 /LuFe 2 O 4 Heterostructure with Emergent Ferroic Orderings

Abstract Achieving self‐assembling structures that exhibit emergent properties and functionalities is one of the holy grails in nanotechnology and holds great promise for a wide range of potential applications. Herein, a self‐assembled LuFeO 3 –(1/3)LuFe 2 O 4 –LuFeO 3 heterostructure that consists of two model multiferroics, i.e., hexagonal LuFeO 3 and rhombohedral LuFe 2 O 4 , is reported in single‐layer epitaxial LuFeO 3 thin films. Atomic‐scale electron microscopy investigations reveal the spontaneous organization of ferroelectric polarization in each building block, which forms a series of polar configurations. Specifically, the charge and lattice of neighboring LuFeO 3 and LuFe 2 O 4 blocks are closely coupled with competing degrees of freedom. A combination of the quantitative analysis of atomically resolved images and spectroscopy with theoretical calculations determines how charge‐ordering‐induced polarization accommodates charge naturality across the interfaces to reduce the system energy and unravels the formation mechanism of this heterostructure. The results point to the possibilities of generation and control of multiferroic self‐assembled systems, which may provide a basis for engineering novel materials with emergent properties.

Deng, Shiqing↗
DOE OSTI2021

Orbital Angular Momentum from Self‐Assembled Concentric Nanoparticle Rings

Abstract Ring‐shaped nanostructures can focus, filter, and manipulate electromagnetic waves, but are challenging to incorporate into devices using standard nanofabrication techniques. Directed self‐assembly (DSA) of block copolymers (BCPs) on lithographically patterned templates has successfully been used to fabricate concentric rings and spirals as etching masks. However, this method is limited by BCP phase behavior and material selection. Here, a straightforward approach to generate ring‐shaped nanoparticle assemblies in thin films of supramolecular nanocomposites is demonstrated. DSA is used to guide the formation of concentric rings with radii spanning 150–1150 nm and ring widths spanning 30–60 nm. When plasmonic nanoparticles are used, ring nanodevice arrays can be fabricated in one step, and the completed devices produce high‐quality orbital angular momentum (OAM). Nanocomposite DSA simplifies and streamlines nanofabrication by producing metal structures without etching or deposition steps; it also introduces interparticle coupling as a new design axis. Detailed analysis of the nanoparticle ring assemblies confirms that the supramolecular system self‐regulates the spatial distribution of its components, and thus exhibits a degree of flexibility absent in DSA of BCPs alone, where structures are determined by polymer‐pattern incommensurability. The present studies also provide guidelines for developing self‐regulating DSA as an alternative to incommensurability‐driven methods.

Vargo, Emma↗
DOE OSTI2018

Effect of Cation–π Interaction on Macroionic Self‐Assembly

Abstract A series of rod‐shaped polyoxometalates (POMs) [Bu 4 N] 7 [Mo 6 O 18 NC(CH 2 O) 3 MnMo 6 O 18 (OCH 2 ) 3 CNMo 6 O 18 ] and [Bu 4 N] 7 [ArNMo 6 O 17 NC(CH 2 O) 3 MnMo 6 O 18 (OCH 2 ) 3 CNMo 6 O 17 NAr] (Ar=2,6‐dimethylphenyl, naphthyl and 1‐methylnaphthyl) were chosen to study the effects of cation–π interaction on macroionic self‐assembly. Diffusion ordered spectroscopy (DOSY) and isothermal titration calorimetry (ITC) techniques show that the binding affinity between the POMs and Zn 2+ ions is enhanced significantly after grafting aromatic groups onto the clusters, leading to the effective replacement of tetrabutylammonium counterions (TBAs) upon the addition of ZnCl 2 . The incorporation of aromatic groups results in the significant contribution of cation–π interaction to the self‐assembly, as confirmed by the opposite trend of assembly size vs. ionic strength when compared with those without aromatic groups. The small difference between two aromatic groups toward the Zn 2+ ions is amplified after combining with the clusters, which consequently triggers the self‐recognition behavior between two highly similar macroanions.

Luo, Jiancheng↗