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At least 937 records · Page 52

Unveiling the catalytic mechanism of GTP hydrolysis in microtubules

Microtubules (MTs) are large cytoskeletal polymers, composed of αβ-tubulin heterodimers, capable of stochastically converting from polymerizing to depolymerizing states and vice versa. Depolymerization is coupled with hydrolysis of guanosine triphosphate (GTP) within β-tubulin. Hydrolysis is favored in the MT lattice compared to a free heterodimer with an experimentally observed rate increase of 500- to 700-fold, corresponding to an energetic barrier lowering of 3.8 to 4.0 kcal/mol. Mutagenesis studies have implicated α-tubulin residues, α:E254 and α:D251, as catalytic residues completing the β-tubulin active site of the lower heterodimer in the MT lattice. The mechanism for GTP hydrolysis in the free heterodimer, however, is not understood. Additionally, there has been debate concerning whether the GTP-state lattice is expanded or compacted relative to the GDP state and whether a “compacted” GDP-state lattice is required for hydrolysis. In this work, extensive quantum mechanics/molecular mechanics simulations with transition-tempered metadynamics free-energy sampling of compacted and expanded interdimer complexes, as well as a free heterodimer, have been carried out to provide clear insight into the GTP hydrolysis mechanism. α:E254 was found to be the catalytic residue in a compacted lattice, while in the expanded lattice, disruption of a key salt bridge interaction renders α:E254 less effective. The simulations reveal a barrier decrease of 3.8 ± 0.5 kcal/mol for the compacted lattice compared to a free heterodimer, in good agreement with experimental kinetic measurements. Additionally, the expanded lattice barrier was found to be 6.3 ± 0.5 kcal/mol higher than compacted, demonstrating that GTP hydrolysis is variable with lattice state and slower at the MT tip.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Metal Chalcogenides for Neuromorphic Computing: Emerging Materials and Mechanisms

The approaching end of Moore's Law scaling has significantly accelerated multiple fields of research including neuromorphic-, quantum-, and photonic computing, each of which possesses unique benefits unobtained through conventional binary computers. One of the most compelling arguments for neuromorphic computing systems is power consumption, noting that computations made in the human brain are approximately 106 times more efficient than conventional CMOS logic. This review article focuses on the materials science and physical mechanisms found in metal chalcogenides that are currently being explored for use in neuromorphic applications. We begin by reviewing the key biological signal generation and transduction mechanisms within neuronal components of mammalian brains and subsequently compare with observed experimental measurements in chalcogenides. With robustness and energy efficiency in mind, we will focus on short-range mechanisms such as structural phase changes and correlated electron systems that can be driven by low-energy stimuli, such as temperature or electric field. We aim to highlight fundamental materials research and existing gaps that need to be overcome to enable further integration or advancement of metal chalcogenides for neuromorphic systems.

36 MATERIALS SCIENCE↗

In-field critical current and pinning mechanisms at 4.2 K of Zr-added REBCO coated conductors

The critical current and pinning mechanisms at 4.2 K have been studied over a magnetic field range of 0–14 T for Zr-added (0, 5 and 15 mol.%) REBa 2 Cu 3 O 7-x (REBCO and RE = rare earth) coated conductors fabricated by advanced metal organic chemical vapor deposition (A-MOCVD). It is found that the (Ba + Zr)/Cu content in Zr-added (5 and 15 mol.%) REBCO affects the critical current at 77 K, 0 T as well as density, continuity and shape of BaZrO 3 (BZO) self-assembled nanocolumns and RE 2 O 3 in-plane precipitates that significantly enhance the pinning force density Fp(H) as well as isotropic pinning landscape at 4.2 K. In addition to bell-shape dependence of critical current density, J c , at 4.2 K with (Ba + Zr)/Cu content we observed an unusual Fp(H) behavior correlated to particular type of pinning centers, morphology and distribution that have been revealed by TEM microstructure analysis. By fitting the Dew–Hughes equation of the pinning force density Fp(H) at 4.2 K we extract the scaling behaviors of the Fp(H) associated with the competition of pinning mechanisms driven by vertically-aligned BZO nanorods and in-plane RE 2 O 3 pinning defects. This result sheds light on approaches towards interactive control of strong and isotropic pinning centers in Zr-added REBa 2 Cu 3 O 7-x (REBCO and RE = rare earth) coated conductors, and especially understanding the correlation between microstructural characteristics and vortex pinning mechanisms at 4.2 K in high magnetic fields.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Materials and technological processes for High-Gradient accelerating structures: new results from mechanical tests of an innovative braze-free cavity.

Pure oxygen-free high-conductivity copper is a widely used material for manufacturing accelerating cavities working at room temperature. Several studies attempted to explain limitations associated with the maximum allowed field gradients and the behaviour of vacuum RF breakdown in copper accelerating structures through generation and movement of dislocations under stresses associated with RF electric and magnetic fields. Pure copper and also copper alloys undergo mechanical and thermal treatments to be hardened and strengthened during manufacturing, although their mechanical properties significantly change after heating above 590°C. High temperature brazing and diffusion bonding are assembly methods widely used to manufacture ultra-high vacuum accelerating devices. However, these processes, occurring at about 800–1000°C, significantly affect the mechanical properties of copper and copper alloys. We introduce here a novel Tungsten Inert Gas welding procedure, which is fast and keeps the high-gradient surfaces of the cavity and other components well below the copper annealing temperature. This process may be successfully used to manufacture copper-based accelerating components. This technology further preserves the hardness and cleanliness of copper in order to achieve the maximum accelerating gradient.

47 OTHER INSTRUMENTATION↗

Simulations with machine learning potentials identify the ion conduction mechanism mediating non-Arrhenius behavior in LGPS

Abstract Li 10 Ge(PS 6 ) 2 (LGPS) is a highly concentrated solid electrolyte, in which Coulombic repulsion between neighboring cations is hypothesized as the underlying reason for concerted ion hopping, a mechanism common among superionic conductors such as Li 7 La 3 Zr 2 O 12 (LLZO) and Li 1.3 Al 0.3 Ti 1.7 (PO 4 ) 3 (LATP). While first principles simulations using molecular dynamics (MD) provide insight into the Li + transport mechanism, historically, there has been a gap in the temperature ranges studied in simulations and experiments. Here, we used a neural network potential trained on density functional theory (DFT) simulations, to run up to 40-nanosecond long MD simulations at DFT-like accuracy to characterize the ion conduction mechanisms across a range of temperatures that includes previous simulations and experimental studies. We have confirmed a Li + sublattice phase transition in LGPS around 400 K, below which the ab -plane diffusivity D a b ∗ is drastically reduced. Concomitant with the sublattice phase transition near 400 K, there is less cation-cation (cross) correlation, as characterized by Haven ratios closer to 1, and the vibrations in the system are more harmonic at lower temperature. Intuitively, at high temperature, the collection of vibrational modes may be sufficient to drive concerted ion hops. However, near room temperature, the vibrational modes available may be insufficient to overcome electrostatic repulsion, thus resulting in less correlated ion motion and comparatively slower ion conduction. Such phenomena of a sublattice phase transition, below which concerted hopping plays a less significant role, may be extended to other highly concentrated solid electrolytes such as LLZO and LATP.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

On various mechanisms of shear wave generation from underground chemical explosions in hard rocks

Significant shear waves observed during underground explosions can make them look similar to natural earthquakes. In the near field, they can be caused by the source geometry and emplacement conditions, heterogeneous and anisotropic properties of the rock mass, relaxation of a non-uniform in situ stress around the source after the departure of the shock wave as well as by activation of nearby faults. Here, the stress relaxation mechanism is important at depth when the difference in main principal stresses becomes significant. Another mechanism of shear motion generation is due to explosive gas flow from the source cavity into the cracks initiated by the shock wave and joints connected to the cavity. Also, the shock wave from the explosion can cause weakening of the rock either due to permanent damage or shock-induced liquefaction at saturated joints. Numerical modelling of underground chemical explosions in hard rock at various confinement stresses has been conducted to compare various mechanisms of shear wave generation and their seismic characteristics with that of a simple fault rupture process observed during an earthquake.

58 GEOSCIENCES↗

Spatially resolved properties of early-type group-dominant galaxies with MUSE: gas content, ionization mechanisms, and metallicity gradients

ABSTRACT With the goal of a thorough investigation of the ionized gas and its origin in early-type group-dominant galaxies, we present archival MUSE data for 18 galaxies from the Complete Local-Volume Groups Sample (CLoGS). These data allowed us to study the spatially resolved warm gas properties, including the morphology of the ionized gas, EW(H α), and kinematics as well as the gas-phase metallicity (12 + log(O/H)) of these systems. In order to distinguish between different ionization mechanisms, we used the emission-line ratios [O iii]/H β and [N ii]/H α in the BPT diagrams and EW(H α). We find that the ionization sources in our sample have variable impacts at different radii; central regions are more influenced by low-luminosity active galactic nuclei, while extended regions of low-ionization nuclear emission-line region-like emission are ionized by other mechanisms with post-asymptotic giant branch stars photoionization likely contributing significantly. We classified our sample into three H α +[N ii] emission morphology types. We calculate the gas-phase metallicity assuming several methods and ionization sources. In general, 12 + log(O/H) decreases with radius from the centre for all galaxies, independently of nebular morphology type, indicating a metallicity gradient in the abundance profiles. Interestingly, the more extended filamentary structures and all extranuclear star-forming regions present shallow metallicity gradients. Within the uncertainties these extended structures can be considered chemically homogeneous. We suggest that group-dominant galaxies in our sample likely acquired their cold gas in the past as a consequence of one or more mechanisms, e.g. gas-clouds or satellite mergers/accretion and/or cooling flows that contribute to the growth of the ionized gas structures.

Lagos, P. (ORCID:0000000223218657)↗

Uniaxial tensile mechanical properties from a scratch on ultra-fine grained tungsten

We demonstrate that surface-based mechanical testing can be used to quantify a wide range of mechanical properties determined using traditional uniaxial tension experiments. These include mapping of dynamic stress–strain behaviour, which can be used as a screening tool for uniaxial tensile ductility (uniform elongation), fracture toughness (K C ), which is shown to be in good agreement with reported plane-strain K IC , as well work-hardening exponents (n), activation volumes (V) energies (Q) and strain-rate sensitivity (m) exponents as a function of temperature. Advantages of the surface-based approach are the ability to work with significantly smaller volumes and accommodate processing defects like pores, voids and cracks. These methods are applied to ultra-fine grained tungsten (average grain size of 650 nm), as it is an ideal candidate for alloy development efforts in advanced energy systems. Tungsten is a useful baseline as it exhibits a near-ambient temperature (approx. 200°C) ductile-to-brittle transition temperature (DBTT), enabling validation efforts for the proposed methods, and extraordinary material properties, including the highest melting temperature of any metal and complex temperature and strain-rate dependencies linked to transitions in dislocation mechanisms.

36 MATERIALS SCIENCE↗

Nonlinear elasticity and short-range mechanical coupling govern the rate and symmetry of mouth opening in Hydra

Hydra has a tubular bilayered epithelial body column with a dome-shaped head on one end and a foot on the other. Hydra lacks a permanent mouth: its head epithelium is sealed. Upon neuronal activation, a mouth opens at the apex of the head which can exceed the body column diameter in seconds, allowing Hydra to ingest prey larger than itself. While the kinematics of mouth opening are well characterized, the underlying mechanism is unknown. We show that Hydra mouth opening is generated by independent local contractions that require tissue-level coordination. We model the head epithelium as an active viscoelastic nonlinear spring network. The model reproduces the size, timescale and symmetry of mouth opening. It shows that radial contractions, travelling inwards from the outer boundary of the head, pull the mouth open. Nonlinear elasticity makes mouth opening larger and faster, contrary to expectations. Here, the model correctly predicts changes in mouth shape in response to external forces. By generating innervated : nerve-free chimera in experiments and simulations, we show that nearest-neighbor mechanical signaling suffices to coordinate mouth opening. Hydra mouth opening shows that in the absence of long-range chemical or neuronal signals, short-range mechanical coupling is sufficient to produce long-range order in tissue deformations.

59 BASIC BIOLOGICAL SCIENCES↗

Ferroelectric Fractals: Switching Mechanism of Wurtzite AlN

The advent of wurtzite ferroelectrics is enabling new ferroelectric devices for computer memory that have the potential to bypass the von Neumann bottleneck due to their robust polarization and silicon compatibility. However, the atomistic switching mechanism of wurtzites is still undetermined due to the limitations of density functional theory simulation size and experimental temporal and spatial resolution. Thus, physics-informed materials engineering to reduce coercive field and breakdown in these devices has been limited. In this work, the atomistic mechanism of domain wall migration and domain growth in aluminum nitride-based wurtzites is uncovered using molecular dynamics and Monte Carlo simulations. We reveal the anomalous switching mechanism of fast 1D single columns of atoms propagating from a slow-moving 2D fractallike domain wall. We find that the critical nucleus is a single aluminum ion that breaks its bond with one nitrogen and bonds to another nitrogen; this creates a cascade that flips atoms directly only in the same column, due to the extreme locality (sharpness) of the domain walls in wurtzites. We further show how the fractallike shape of the domain wall in the 2D plane breaks assumptions in the Kolmogorov, Avrami, and Ishibashi (KAI) model and leads to the anomalously fast switching in wurtzite structured ferroelectrics.

36 MATERIALS SCIENCE↗

Controlling Deformation in Al/Ti: How Interface Roughness and Orientation Drive Bimetal Mechanics

The microstructural characteristics and morphology of interfaces in metals can be crucial in governing the initiation of plasticity and early deformation mechanisms under extreme conditions. During high-strain-rate deformation, these interfaces significantly affect dislocation nucleation, twinning, and other mechanisms that directly impact material strength and failure. Despite their importance, a substantial knowledge gap remains between the observed macroscopic material behavior and the underlying role of bimetal interfaces in plasticity initiation. Here, to address this gap, large-scale molecular dynamics simulations are performed on Al/Ti bimetal structures to examine the effect of interface characteristics on the onset of plasticity under uniaxial compression. Specifically, this study investigates how interface roughness (flat vs waveform interfaces) modifies the initiation of plastic events in the microstructure. Atomistic simulations indicate that interface roughness (a microscopic behavior) reduces the stress required for dislocation nucleation, thereby reducing the peak stress relative to a flat interface. For the square interface, the step height strongly influences plasticity initiation by setting the separation of locally flat regions. Varying the interface rotation relative to the loading direction (macroscopic behavior) reveals that the peak stress for both flat and waveform interfaces initially decreases and then increases with rotation, accompanied by a shift in dominant mechanisms—from Al twinning (flat) to interface sliding and Ti-dominated phase transformation and twinning at lower angles. The change in the stress-strain slope during initial compression reflects how rotation alters the resolved shear stress and activates different slip systems. Overall, the study provides valuable insights into the role of bimetal interfaces in controlling plasticity initiation and early deformation pathways for Al/Ti under extreme loading conditions.

36 MATERIALS SCIENCE↗

Mechanism of shape symmetry breaking in surfactant-mediated crystal growth

We present a dynamical model of crystal growth, in which it is possible to reliably achieve asymmetric products, beginning from symmetric initial conditions and growing within an isotropic environment. The asymmetric growth is the result of a positive feedback mechanism that amplifies the effect of thermal fluctuations in the coverage of surfactants on the growing crystalline facets. Within our simple model, we are able to understand the kinetic and thermodynamic factors involved in both the onset of symmetry breaking and the persistence of anisotropic growth. We demonstrate that the mechanism is general by studying models with increasing complexity. We argue that this mechanism of symmetry breaking underpins observations of colloidal, seed-mediated syntheses of single crystalline metal nanorods capped with strongly interacting surfactants. The parameters within our model are related to experimental observables such as the concentration, hydrophobicity, and binding strength of the surfactants, which suggests a potential route to optimize the yield of asymmetric products in colloidal nanoparticle syntheses.

Oaks-Leaf, Sam↗

Testing the Froggatt-Nielsen mechanism with lepton flavor and number violating processes

The Froggatt-Nielsen (FN) mechanism offers an elegant explanation for the observed masses and mixings of Standard Model fermions. In this work, we systematically study FN models in the lepton sector, identifying a broad range of charge assignments (“textures”) that naturally yield viable masses and mixings for various neutrino mass generation mechanisms. Using these textures, we consider higher-dimensional operators consistent with a FN origin and find that natural realizations predict distinct patterns in lepton flavor- and number-violating observables. For Dirac and Majorana neutrinos, FN-related correlations can lead to detectable rates of charged lepton flavor violation at next-generation low-energy experiments. Majorana and type-I seesaw models predict measurable rates of neutrinoless double beta decay. Determination of inverted neutrino mass ordering would exclude the Dirac neutrino FN scenario. Only a small minority of purely leptonic FN models predict detectable flavor violation at future muon colliders, though it is possible that a combined analysis with the quark sector will reveal motivated signals. These findings highlight the power of the FN mechanism to link neutrino mass generation to testable leptonic observables, offering new pathways for the experimental exploration of lepton number and underscoring the importance of next-generation low-energy probes.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Debye mechanism of giant microwave absorption in superconductors

Here, we discuss a novel mechanism of microwave absorption in superconductors, which is similar to the Debye absorption mechanism in molecular gases. The contribution of this mechanism to the ac conductivity is proportional to the inelastic quasiparticle relaxation time $τ_{\text{in}}$ rather than the elastic one $τ_{\text{el}}$ and therefore it can be much larger than the conventional one. The Debye contribution to the linear conductivity arises only in the presence of a dc supercurrent in the system and its magnitude depends strongly on the orientation of the microwave field relative to the supercurrent. The Debye contribution to the nonlinear conductivity exists even in the absence of dc supercurrent, and it is proportional to $τ_{\text{in}}$. Therefore the nonlinear threshold is anomalously low. Microwave absorption measurements may provide direct information about $τ_{\text{in}}$ in superconductors.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Euclidean formulation of relativistic quantum mechanics of N particles

A Euclidean formulation of relativistic quantum mechanics for systems of a finite number of degrees of freedom is discussed. Relativistic treatments of quantum theory are needed to study hadronic systems at subhadronic distance scales. While direct interaction approaches to relativistic quantum mechanics have proved to be useful, they have two disadvantages. One is that cluster properties are difficult to realize for systems of more than two particles. The second is that the relation to quantum field theories is indirect. Euclidean formulations of relativistic quantum mechanics provide an alternative representation that does not have these difficulties. More surprising, the theory can be formulated entirely in the Euclidean representation without the need for analytic continuation. In this work a Euclidean representation of a relativistic N-particle system is discussed. Kernels for systems of N free particles of any spin are given and shown to be reflection positive. Explicit formulas for generators of the Poincaré group for any spin are constructed and shown to be self-adjoint on the Euclidean representation of the Hilbert space. The structure of correlations that preserve both the Euclidean covariance and reflection positivity is discussed.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Simulating quantum mechanics with a $\theta$-term and an ’t Hooft anomaly on a synthetic dimension

A topological θ-term in gauge theories, including quantum chromodynamics in 3 +1 dimensions, gives rise to a sign problem that makes classical Monte Carlo simulations impractical. Quantum simulations are not subject to such sign problems and are a promising approach to studying these theories in the future. In the near term, it is interesting to study simpler models that retain some of the physical phenomena of interest and their implementation on quantum hardware. For example, dimensionally reducing gauge theories on small spatial tori produces quantum mechanical models which, despite being relatively simple to solve, retain interesting vacuum and symmetry structures from the parent gauge theories. We consider quantum mechanical particle-on-a-circle models, related by dimensional reduction to the 1 + 1d Schwinger model, that possess a θ-term and realize an ’t Hooft anomaly or global inconsistency at θ = π. These models also exhibit the related phenomena of spontaneous symmetry breaking and instanton-anti-instanton interference in real time. We propose an experimental scheme for the real-time simulation of a particle on a circle with a θ-term and a $\mathbb{Z}_n$ potential using a synthetic dimension encoded in a Rydberg atom. Simulating the Rydberg atom with realistic experimental parameters, we demonstrate that the essential physics can be well captured by the experiment, with expected behavior in the tunneling rate as a function of θ. Similar phenomena and observables can also arise in more complex quantum mechanical models connected to higher-dimensional non-Abelian gauge theories by dimensional reduction.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Dual Mechanism for Transient Capacitance Anomaly in Improper Ferroelectrics

Negative capacitance (NC) effects in ferroelectrics can potentially break fundamental limits of power dissipation known as “Boltzmann tyranny.” However, the origin of transient NC of ferroelectrics, which is attributed to two different mechanisms involving free-energy landscape and nucleation, is under intense debate. Here, we report the coexistence of transient NC and an S-shaped anomaly during the switching of ferroelectric hexagonal ferrites capacitor in an RC circuit. The early-stage NC arises from the nucleation process, while the late-stage S-shaped anomaly corresponds to a nascent NC associated with the free-energy landscape. The entire waveform can be reproduced using a hybrid model that simultaneously incorporates these two mechanisms. These results highlight the multivariable free-energy landscape of hexagonal ferrites that enables an abrupt change of the internal field and demonstrate that the two mechanisms are not mutually exclusive, resolving the long-standing debate. In conclusion, the behavior of the S-shaped anomaly also provides a pathway to extract parameters of free-energy landscape and switching dynamics.

Capacitance↗

Full characterization of ultrathin 5-nm low-k dielectric bilayers: Influence of dopants and surfaces on the mechanical properties

Ultrathin films and multilayers, with controlled thickness down to single atomic layers, are critical for advanced technologies ranging from nanoelectronics to spintronics to quantum devices. However, for thicknesses less than 10 nm, surfaces and dopants contribute significantly to the film properties, which can differ dramatically from that of bulk materials. Therefore, for amorphous films being developed as low dielectric constant interfaces for nanoelectronics, the presence of surfaces or dopants can soften films and degrade their mechanical performance. Here we use coherent short-wavelength light to fully and nondestructively characterize the mechanical properties of individual films as thin as 5 nm within a bilayer. In general, we find that the mechanical properties depend both on the amount of doping and the presence of surfaces. In very thin (5-nm) silicon carbide bilayers with low hydrogen doping, surface effects induce a substantial softening - by almost an order of magnitude - compared with the same doping in thicker (46-nm) bilayers. These findings are important for informed design of ultrathin films for a host of nano- and quantum technologies, and for improving the switching speed and efficiency of next-generation electronics.

36 MATERIALS SCIENCE↗