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At least 937 records · Page 52

Perceived Costs and Benefits of ICON Science and Foundational Documents associated with “Integrated, Coordinated, Open, and Networked (ICON) Science to Advance the Geosciences: Introduction and Synthesis of a Special Collection of Commentary Articles"

This data package is associated with the publication "Integrated, Coordinated, Open, and Networked (ICON) Science to Advance the Geosciences: Introduction and Synthesis of a Special Collection of Commentary Articles" in Earth and Space Science (Goldman et al. 2022; https://doi.org/10.1029/2021EA002099). The manuscript is an introductory article for a special collection of commentary articles across 19 geoscience disciplines that explore the challenges and opportunities associated with the use of ICON science principles. These principles focus on research intentionally designed to be Integrated, Coordinated, Open, and Networked (ICON) with the goal of maximizing mutual benefit (among stakeholders) and cross-system transferability of science outcomes. This data package contains data, figures, and R scripts associated with the cost/benefit analysis presented in the manuscript. The writing teams involved in the special collection placed each letter of ICON on a plot with perceived cost on one axis and perceived benefit on the other to summarize their perceptions of pursuing each principle of ICON science. These data were subsequently quantified and analyzed. Files are saved as .csv, .R, and .pdf. This data package also contains (1) the public foundational and instructional documents that enabled the crowdsourced creation of the special collection; (2) file-level metadata (flmd) that lists each file in the data package with a description; (3) data dictionary (dd) that defines column headers that appear in csv files. Files are saved as .pdf and .csv.

54 ENVIRONMENTAL SCIENCES↗

CRNT4SBML: a Python package for the detection of bistability in biochemical reaction networks

Motivation: Signaling pathways capable of switching between two states are ubiquitous within living organisms. They provide the cells with the means to produce reversible or irreversible decisions. Switchlike behavior of biological systems is realized through biochemical reaction networks capable of having two or more distinct steady states which are dependent on initial conditions. Investigation of whether a certain signaling pathway can confer bistability involves a substantial amount of hypothesis testing. The cost of direct experimental testing can be prohibitive. Therefore, constraining the hypothesis space is highly bene?cial. One such methodology is based on Chemical Reaction Network Theory which uses computational techniques to rule out pathways that are not capable of bistability regardless of kinetic constant values and molecule concentrations. Although useful, these methods are complicated from both pureandcomputationalmathematicsperspectives.Thus,theiradoptionisverylimitedamongstbiologists. Results: We brought Chemical Reaction Network Theory approaches closer to experimental biologists by automating all the necessary steps in CRNT4SMBL. The input is based on SBML format which is the community standard for biological pathway communication. The tool parses SBML and derives C-graph representations of the biological pathway with mass action kinetics. Next steps involve an ef?cient search for potential saddle-node bifurcation points using an optimization technique. This type of bifurcation is important as it has the potential of acting as a switching point between two steady states. Finally, if any bifurcation points are present, numerical continuation analysis extends the equilibria branches for generating the diagram. Presence of an S-shaped bifurcation diagram indicates that the pathway acts as a bistable switch for the given optimization parameters. Availability: CRNT4SBML is available via the Python Package Index. The documentation can be found at https://crnt4sbml.readthedocs.io. CRNT4SBML is licensed under the Apache Software License 2.0. Contact: vladislav.petyuk@pnnl.gov

Reyes, Brandon C.↗

MELCOR Code Change History (Revision 14959 to 18019)

This document summarily provides brief descriptions of the MELCOR code enhancement made between code revision number 14959and 18019. Revision 14959 represents the previous official code release; therefore, the modeling features described within this document are provided to assist users that update to the newest official MELCOR code release, 18019. Along with the newly updated MELCOR Users Guide and Reference Manual, users are aware and able to assess the new capabilities for their modeling and analysis applications.

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

Beta-Gamma Data Viewer v2.2.34 User's Manual

This document provides an overview, and procedures, for operating the beta-gamma data viewer for 7 regions of interest (7 ROI) data. The Beta-Gamma 7 ROI Data Viewer is a set of software tools that allow for viewing and analysis of IMS 2.0 Pulse Height Data (PHD) / Pulse Beta Gamma (PBG) files, state of health (SoH) files, and event log files. This is an upgrade from previous release of the tool that includes calibration tools.

97 MATHEMATICS AND COMPUTING↗

Review of In Situ Sensing for Directed Energy Deposition for Industrial Part Quality Assessment

As the use additive manufacturing (AM) processes continues to grow in critical industries, improved quality assurance methods are becoming increasingly sought after for qualification and certification of AM components. Traditional nondestructive evaluation of printed components is often unable to supply the required confidence in print quality to justify qualification and certification, but the layer-by-layer nature of AM provides unprecedented opportunities for in situ quality inspection. This document summarizes recent developments in process monitoring research specifically related to Directed Energy Deposition (DED). Particular attention is given to three aspects of the highlighted manuscripts: (1) the type of sensors used, (2) features extracted from each sensor modality, and (3) analysis of extracted features for AM quality assessment. Based on the review of the state-of-the-art, several observations have been made. First, none of the reviewed works have applied their trained models to real part geometries, with many of the works relying on single track experiments, thin-walled structures, and cubes. Similarly, there have not been any works demonstrating model generalizability, i.e., a model trained on data from one build allows for fruitful analysis of data from another build. Many works used machine learning techniques to distinguish different process regimes (i.e., normal, keyholing, lack-of-fusion), but very few papers have investigated stochastic variation in an already “optimized” process. Sensor fusion approaches are also limited in the DED sensing literature, but the few works that have employed such techniques have demonstrated the benefits. Finally, registration of in situ data to the build coordinate system is of paramount importance to producing industrially relevant in situ monitoring systems. Data registration allows direct correlations between process anomalies detected in the process monitoring data to localized departures in part quality, but such techniques are generally lacking in the current literature.

36 MATERIALS SCIENCE↗

Carbon Utilization and Storage Partnership of the Western United States

This technical report documents research conducted under DOE Award No. DE-FE0031837 focused on evaluating the feasibility of carbon capture, utilization, and storage (CCUS) systems in the central and western United States. The project integrated geologic characterization, reservoir simulation, infrastructure modeling, and economic analysis to assess CO₂ storage potential near industrial sources and develop strategies for transport and sequestration. The work included subsurface modeling, risk assessment, monitoring and verification (MRV) planning, and evaluation of regulatory pathways such as EPA Underground Injection Control (UIC) Class VI permitting and IRS 45Q tax credit eligibility. Results demonstrate the viability of multiple storage approaches, including saline formations, enhanced coalbed methane recovery, and basalt mineralization, supported by data-driven workflows and regional analyses. The project also produced permitting templates, technology transfer activities, and stakeholder engagement efforts to support deployment readiness. These findings contribute to the development of scalable, economically viable CCUS systems and provide a repeatable framework for future carbon management projects.

20 FOSSIL-FUELED POWER PLANTS↗

Updated General Aviation Non-Airport Crash Density Values Using Data Obtained from the U.S. National Transportation Safety Board for 2000 through 2019

This report documents the calculation of the General Aviation (GA) non-airport crash density for Department of Energy (DOE) sites and power generating facilities licensed by the Nuclear Regulatory Commission (NRC) using the methodology outlined in DOE-STD-3014-2006, Accident Analysis for Aircraft Crash Into Hazardous Facilities. The results of this report will be used by the American Nuclear Society (ANS) for the development of ANS standard 2.36, Accident Analysis for Aircraft Crash into Reactor and Nonreactor Nuclear Facilities.

99 GENERAL AND MISCELLANEOUS↗

Status of New Models Hosted on the Virtual Test Bed (VTB) in 2024

The National Reactor Innovation Center (NRIC) mission is to support deployment of novel reactor concepts. This is achieved by providing physical and virtual spaces for building and testing various components, systems, and complete pilot plants. The Virtual Test Bed (VTB) represents the virtual counterpart to the physical test bed. It is in development in collaboration with the Department of Energy’s (DOE) Nuclear Energy Advanced Modeling and Simulation (NEAMS) program. The mission of the VTB is to accelerate the deployment and licensing of advanced reactors by leveraging state-of-the-art modeling and simulation (M&S) tools developed by the DOE NEAMS program. This is accomplished by three primary means: (1) openly hosting simulations that showcase analysis capabilities, (2) continuously testing the models hosted against code updates to avoid deprecation, and (3) filling key M&S gaps that are relevant for the physical NRIC test beds. The VTB repository consists of two sub-entities: 1. A documentation website detailing the models (https://mooseframework.inl.gov/virtual_test_bed). 2. A GitHub repository that hosts the corresponding files (https://github.com/idaholab/virtual_test_bed). Previous documentation on the models hosted in the VTB can be found in [1,2,3,4]. These references also include additional background information on the various NEAMS codes showcased in the VTB (which is omitted here for brevity). This paper primarily provides a status update of the most recent additions to the repository.

22 - GENERAL STUDIES OF NUCLEAR REACTORS↗

Neutronic Characteristics of ENDF/B-VIII.0 Compared to ENDF/B-VII.1 for Light-Water Reactor Analysis

The Evaluated Nuclear Data File (ENDF)/B-VIII.0 data library was released in 2018. To assess the new data during development and shortly after release, many validation calculations were performed with static, room-temperature benchmarks. Recently, when performing validation of ENDF/B-VIII.0 for pressurized water reactor depletion calculations, a regression in performance compared to ENDF/B-VII.1 was observed. This paper documents extensive benchmark calculations for light-water reactors performed using continuous energy Monte Carlo code with ENDF/B-VII.1 and -VIII.0 and neutronic characteristics of ENDF/B-VIII.0 are discussed and compared to those of ENDF/B-VII.1. It is our recommendation that ENDF/B data library assessment should include reactor-specific benchmark assessments, including depletion cases, such that these types of regressions may be caught earlier in the data development cycle.

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

Validation of SAS4A/SASSYS-1 for predicting steady-state single-phase natural circulation

The validation of system analysis codes for nuclear reactor systems is required for the development and application of these computational tools. Designed as a comprehensive system analysis code for advanced nuclear reactors, SAS4A/SASSYS-1 requires validation of its physics model for capturing single-phase natural circulation behavior. To support the validation of SAS4A/SASSYS-1, high-precision experiments are performed capturing steady-state single-phase natural circulation on a scaled facility with comprehensive instrumentation. In this work, dedicated tests are performed quantifying the critical modeling parameters, and a single-phase natural circulation benchmark dataset is obtained with well-documented uncertainty and comprehensive facility description. The validation is then performed against the dataset examining the capability of SAS4A/SASSYS-1 in simulating steady-state single-phase natural circulation. The experimental facility is modeled in the candidate code. Solution verification is performed using Richardson-extrapolation-based estimators which quantify and restrict numerical errors from discretization. Input uncertainty provided by the benchmark dataset is forward propagated through the candidate code, quantifying the output uncertainty in a Monte Carlo approach. The composition of the output uncertainty is also quantified through a variance-based sensitivity analysis. With the uncertainty quantified for each individual condition, a detailed comparison between the simulation results and experimental data is performed covering the whole dataset. The results show consistent agreement for all primary parameters. The current validation activity provides a valuable benchmark dataset for the validation of system analysis codes in capturing single-phase natural circulation and demonstrates satisfactory prediction capability of SAS4A/SASSYS1 for steady-state single-phase natural circulation.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

Predicting nutrition and environmental factors associated with female reproductive disorders using a knowledge graph and random forests

Female reproductive disorders (FRDs) are common health conditions that may present with significant symptoms. Diet and environment are potential areas for FRD interventions. We utilized a knowledge graph (KG) method to predict factors associated with common FRDs (for example, endometriosis, ovarian cyst, and uterine fibroids). We harmonized survey data from the Personalized Environment and Genes Study (PEGS) on internal and external environmental exposures and health conditions with biomedical ontology content. We merged the harmonized data and ontologies with supplemental nutrient and agricultural chemical data to create a KG. We analyzed the KG by embedding edges and applying a random forest for edge prediction to identify variables potentially associated with FRDs. We also conducted logistic regression analysis for comparison. Across 9765 PEGS respondents, the KG analysis resulted in 8535 significant or suggestive predicted links between FRDs and chemicals, phenotypes, and diseases. Amongst these links, 32 were exact matches when compared with the logistic regression results, including comorbidities, medications, foods, and occupational exposures. Mechanistic underpinnings of predicted links documented in the literature may support some of our findings. Our KG methods are useful for predicting possible associations in large, survey-based datasets with added information on directionality and magnitude of effect from logistic regression. These results should not be construed as causal but can support hypothesis generation. This investigation enabled the generation of hypotheses on a variety of potential links between FRDs and exposures. Future investigations should prospectively evaluate the variables hypothesized to impact FRDs.

60 APPLIED LIFE SCIENCES↗

Gut microbiome partially mediates and coordinates the effects of genetics on anxiety-like behavior in Collaborative Cross mice

Abstract Growing evidence suggests that the gut microbiome (GM) plays a critical role in health and disease. However, the contribution of GM to psychiatric disorders, especially anxiety, remains unclear. We used the Collaborative Cross (CC) mouse population-based model to identify anxiety associated host genetic and GM factors. Anxiety-like behavior of 445 mice across 30 CC strains was measured using the light/dark box assay and documented by video. A custom tracking system was developed to quantify seven anxiety-related phenotypes based on video. Mice were assigned to a low or high anxiety group by consensus clustering using seven anxiety-related phenotypes. Genome-wide association analysis (GWAS) identified 141 genes (264 SNPs) significantly enriched for anxiety and depression related functions. In the same CC cohort, we measured GM composition and identified five families that differ between high and low anxiety mice. Anxiety level was predicted with 79% accuracy and an AUC of 0.81. Mediation analyses revealed that the genetic contribution to anxiety was partially mediated by the GM. Our findings indicate that GM partially mediates and coordinates the effects of genetics on anxiety.

59 BASIC BIOLOGICAL SCIENCES↗

Goldsim Modeling of Vadose Zone Transport for E-Area Naval Reactor Component Disposal Areas: Model Description and Benchmarking

This report documents the development of a GoldSim® model of flow and radionuclide transport to the water table through the Naval Reactor Components Disposal Area (NRCDA) waste disposal sites and underlying vadose zones. The model is designed to be used for Monte Carlo uncertainty analysis in support of the E-Area Performance Assessment (PA). This report describes the model and shows results obtained from benchmarking the model to best-estimate deterministic results obtained using a PORFLOW model of NRCDA vadose zone transport. The PORFLOW model is three-dimensional while the GoldSim model is a simplified one-dimensional treatment. Nevertheless, the GoldSim model was able to accurately reproduce PORFLOW results with some adjustment to the nominal dispersion coefficient and vadose zone flow area used as “tuning” parameters. An example of the results obtained comparing GoldSim and PORFLOW calculation of releases of I-129, Tc-99, C-14 and Ni-59 from waste disposal containers at the 643-26E site is shown in Figure 1 below. For all of the test cases evaluated, GoldSim predicted peak concentrations within 6% of the PORFLOW values and peak times agreed within 8% with the majority of the results in better agreement. The close agreement between the two models provides confidence that GoldSim will give results accurately reflecting the behavior of releases from the NRCDA under off-normal operating conditions for sensitivity and uncertainty analysis

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Assessment of BQ-9000 Biodiesel Properties for 2020 (CRADA CRD-15-593)

Biodiesel producers in the United States and Canada can voluntarily participate in the industry's BQ-9000 quality assurance program. This is the fourth in a series of reports documenting biodiesel quality from participating producers. Participants in the BQ-9000 program were requested to voluntarily provide data to a third-party team. This team anonymized and randomized the data prior to providing to the National Renewable Energy Laboratory (NREL) for analysis and reporting. The critical quality parameters analyzed are: sodium and potassium, calcium and magnesium, phosphorus, flash point and alcohol control, water and sediment, cloud point, acid number, free and total glycerin, monoglycerides, sulfur, oxidation stability, and cold soak filterability test (CSFT). The statistical analysis for these parameters is presented in Table ES-1.

09 BIOMASS FUELS↗

Application of a Null-Space Monte Carlo Flow Model Set to the Composite Analysis Base Case Fate and Transport Modeling

The Plateau-to-River (P2R) Model is a groundwater flow and contaminant fate and transport (F&T) simulation model used to support remedial activities conducted by Central Plateau Cleanup Company (CPCCo) at the Hanford Site in Washington State. Figure 1 illustrates the P2R Model extents, discretization, and boundary conditions. The P2R Model is utilized in the composite analysis (CA) for the Hanford Site as the computational engine for computing F&T predictions as described in CP-60406, Hanford Site Composite Analysis Technical Approach Description: Groundwater. The model simulates contaminants of concern within the saturated zone of the uppermost aquifer beneath the Central Plateau and downgradient to the Columbia River. CP-57037, Model Package Report for the Plateau to River Model Version 8.3 documents the current version of the P2R Model including a description of the conceptual site model, model development and calibration, and limitations to the model application.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Community Energy Planning: Best Practices and Lessons Learned in NREL's Work with Communities

Whether driven by local goals and actions, external market forces, or both, the clean energy transition is accelerating. The associated increase in clean energy deployment occurs on the ground in communities. As a result, communities increasingly need technical expertise and assistance in planning for and managing the energy transition. Building on decades of work with state, local, and tribal jurisdictions, NREL's work providing modeling, analysis, and technical expertise to enable more data-driven community energy planning is expanding. To inform and enhance NREL's capabilities in community energy planning and provide a resource for others working in this space, NREL developed this best-practices document through interviews with seasoned NREL practitioners and a review of the literature on equitable community planning. Findings include five best practices for community energy planning that NREL practitioners can apply to increase the impact of their work.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

Using National-Scale Data to Inform Coal Power Plant Redevelopment and Coal Community Revitalization Planning

In the United States, individual coal plants have high variation in their construction and operation. Coal plants commonly have multiple units, with different commissioning ages, operational position, and maintenance conditions – even multiple fuels. These units may be in changing states of utilization, with variation in productivity depending on economic contexts. Coal plants themselves may be temporarily offline, mothballed, retired, or decommissioned due to owner/operator portfolios or market conditions, and the current posture of the plant may be difficult to ascertain without local news sources (Tarekegne et al. 2021). Anticipated dates of plant closures are prospectively represented to regulators and to the Energy Information Administration (EIA), but may also experience uncertainty due to the engineering, environmental, economic and social complexity of closing a very large power plant. As noted in this report, closure of the first unit to the last within a single plant may span more than 20 years. Yet tracking and predicting the position of our nation’s coal fleets on a national scale is deeply important. In developing a case for federal datasets and an approach to building and curating these data, this report identified that data must have high fidelity at the plant-level to be meaningful in aggregate. Plant-scale detail is also a match for its application: national priorities in federal investment range from economic revitalization for coal plant communities to maintaining reliable electric grid operations. This document is organized into a statistical review of coal plant retirements, past and prospective, in the United States; trends in the relationship between closures and existing federal investment programs for community revitalization; and potential methods for accelerating site redevelopment through advanced geospatial analysis based on federal data.

01 COAL, LIGNITE, AND PEAT↗

Investigation of Mercury Compound Partitioning Through the Solvent Extraction System

Savannah River National Laboratory (SRNL) has been requested by Savannah River Mission Completion (SRMC)/ Salt Waste Processing Facility (SWPF) personnel to investigate the potential routes for titanium and mercury accumulations within the SWPF Flowsheet. This report documents work performed to examine how various forms of mercury can migrate through the multiple flowsheets of a solvent extraction system. This entailed 29 single stage distribution tests, a multi-stage Extraction-Scrub-Strip (ESS) test, and a detailed speciation analysis of several salt batch feed samples.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗