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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 937 records · Page 52
All sourcesNASA NTRSDOE OSTI
DOE OSTI2016

Metabolites from invasive pests inhibit mitochondrial complex II: A potential strategy for the treatment of human ovarian carcinoma?

The red pigment caulerpin, a secondary metabolite from the marine invasive green algae Caulerpa cylindracea can be accumulated and transferred along the trophic chain, with detrimental consequences on biodiversity and ecosystem functioning. Despite increasing research efforts to understand how caulerpin modifies fish physiology, little is known on the effects of algal metabolites on mammalian cells. Here we report for the first time the mitochondrial targeting activity of both caulerpin, and its closely related derivative caulerpinic acid, by using as experimental model rat liver mitochondria, a system in which bioenergetics mechanisms are not altered. Mitochondrial function was tested by polarographic and spectrophotometric methods. Both compounds were found to selectively inhibit respiratory complex II activity, while complexes I, III, and IV remained functional. These results led us to hypothesize that both algal metabolites could be used as antitumor agents in cell lines with defects in mitochondrial complex I. Ovarian cancer cisplatin-resistant cells are a good example of cell lines with a defective complex I function on which these molecules seem to have a toxic effect on proliferation. This provided novel insight toward the potential use of metabolites from invasive Caulerpa species for the treatment of human ovarian carcinoma cisplatin-resistant cells. -- Highlights: •Novel insight toward the potential use of the algal metabolites for the treatment of human diseases. •Caulerpin and caulerpinic acid inhibit respiratory complex II activity. •Both algal metabolites could be used as antitumor agents in ovarian cancer cisplatin-resistant cells.

60 APPLIED LIFE SCIENCES↗
NASA NTRSDate not supplied

A Green’s Function Sensor Fusion Approach for Evaluating Spacecraft Entry Heating From on-Board Thermal Instrumentation

During atmospheric entry, distributed thermal measurements are critical to enable the evaluation of heat loads on spacecraft thermal protection systems (TPS). In recent space exploration missions, Schmidt-Boelter-type heat flux gauges have been integrated into the TPS alongside conventional temperature measurement instrumentation to measure total (convective and radiative) and radiative heat transfer rates1,2. While direct heat flux sensors (HFS) are able to provide valuable information detailing the thermal loads experienced by spacecraft, the interpretation of these measurements in unsteady, convective environments requires a correction factor to account for local heating augmentations at the cold wall HFS surface2,3. Current efforts to estimate cold wall correction factors, and thus recover the hot wall TPS heat flux, rely on time-marching computational fluid dynamics (CFD) simulations2. Simulation-based methods are susceptible to large uncertainties, however, as they require estimations of vehicle trajectory, gas kinetics, wall catalysis models, and other flight conditions as input parameters2,4. Furthermore, CFD simulations are computationally expensive and cannot efficiently survey all possible entry scenarios, exacerbating the uncertainty of reconstructed hot wall heat flux values. These drawbacks motivate the development of alternative hot wall heat flux reconstruction methods that are not reliant on CFD-based correction factors.

Kenneth McAfee↗
NASA NTRSDate not supplied

A Green’s Function Sensor Fusion Approach for Evaluating Spacecraft Entry Heating From on-Board Thermal Instrumentation

During atmospheric entry, distributed thermal measurements are critical to enable the evaluation of heat loads on spacecraft thermal protection systems (TPS). In recent space exploration missions, Schmidt-Boelter-type heat flux gauges have been integrated into the TPS alongside conventional temperature measurement instrumentation to measure total (convective and radiative) and radiative heat transfer rates1,2. While direct heat flux sensors (HFS) are able to provide valuable information detailing the thermal loads experienced by spacecraft, the interpretation of these measurements in unsteady, convective environments requires a correction factor to account for local heating augmentations at the cold wall HFS surface2,3. Current efforts to estimate cold wall correction factors, and thus recover the hot wall TPS heat flux, rely on time-marching computational fluid dynamics (CFD) simulations2. Simulation-based methods are susceptible to large uncertainties, however, as they require estimations of vehicle trajectory, gas kinetics, wall catalysis models, and other flight conditions as input parameters2,4. Furthermore, CFD simulations are computationally expensive and cannot efficiently survey all possible entry scenarios, exacerbating the uncertainty of reconstructed hot wall heat flux values. These drawbacks motivate the development of alternative hot wall heat flux reconstruction methods that are not reliant on CFD-based correction factors.

Kenneth McAfee↗
NASA NTRSDate not supplied

A Green’s Function Sensor Fusion Approach for Evaluating Spacecraft Entry Heating From on-Board Thermal Instrumentation

During atmospheric entry, distributed thermal measurements are critical to enable the evaluation of heat loads on spacecraft thermal protection systems (TPS). In recent space exploration missions, Schmidt-Boelter-type heat flux gauges have been integrated into the TPS alongside conventional temperature measurement instrumentation to measure total (convective and radiative) and radiative heat transfer rates1,2. While direct heat flux sensors (HFS) are able to provide valuable information detailing the thermal loads experienced by spacecraft, the interpretation of these measurements in unsteady, convective environments requires a correction factor to account for local heating augmentations at the cold wall HFS surface2,3. Current efforts to estimate cold wall correction factors, and thus recover the hot wall TPS heat flux, rely on time-marching computational fluid dynamics (CFD) simulations2. Simulation-based methods are susceptible to large uncertainties, however, as they require estimations of vehicle trajectory, gas kinetics, wall catalysis models, and other flight conditions as input parameters2,4. Furthermore, CFD simulations are computationally expensive and cannot efficiently survey all possible entry scenarios, exacerbating the uncertainty of reconstructed hot wall heat flux values. These drawbacks motivate the development of alternative hot wall heat flux reconstruction methods that are not reliant on CFD-based correction factors.

Kenneth McAfee↗
DOE OSTI2026

Total Dissolved Nitrogen and Ammonia Data for the East River Watershed, Colorado (2015-2025)

This data package contains mean values for total dissolved nitrogen (TDN) and ammonia concentrations for water samples taken from the East River Watershed in Colorado. The East River is part of the Watershed Function Scientific Focus Area (WFSFA) located in the Upper Colorado River Basin, United States. TDN was analyzed using a Shimadzu Total Nitrogen Module (TNM-1) combined with the TOC-VCSH analyzer (Shimadzu Corporation, Japan). TNM-1 is a non-specific measurement of total nitrogen (TN). All nitrogen species in samples are combusted to nitrogen monoxide and nitrogen dioxide, then reacted with ozone to form an excited state of nitrogen dioxide. Upon returning to ground state, light energy is emitted. Then, TDN is measured using a chemiluminescence detector. Ammonia was determined using a Lachat's QuikChem 8500 Series 2 Flow Injection Analysis System (LACHAT Instruments, QuckChem 8500 series 2, Automated Ion Analyzer, Loveland, Colorado). When ammonia in water samples is heated (60 degrees C) with salicylate and hypochlorite in an alkaline phosphate buffer, an emerald green color is produced which is proportional to the ammonia concentration. The color is intensified by the addition of nitroprusside. Ethylenediaminetetraacetic acid (EDTA) is added to the buffer to prevent the interference of metal ions (Ca, Mg, and Fe etc.). Ammonia-N is then determined by LACHAT flow injection and a colorimetric assay at an absorbance wavelength 660 nm. (Reference: LACHAT Instruments: QuickChem Method 90-107-06-3-A, Determination of Ammonia by Flow Injection Analysis (High Throughput, Salicylate Method/DCIC) (Multi Matrix method). Written by Lynn Egan (Application group), February 08, 2011.) All files are labeled by location and variable, and data reported are the mean values upon replicate measurements. All samples were analyzed under a rigorous quality assurance and quality control (QA/QC) process as detailed in the methods. This data package contains (1) a zip file (tdn_ammonia_data_2015-2025.zip) containing a total of 299 files: 298 data files of ammonia and TDN data from across the Lawrence Berkeley National Laboratory (LBNL) Watershed Function Scientific Focus Area (SFA) which is reported in .csv files per location and a locations.csv (1 file) with latitude and longitude for each location; (2) a file-level metadata (v7_20260901_flmd.csv) file that lists each file contained in the dataset with associated metadata; (3) a data dictionary (v7_20260901_dd.csv) file that contains terms/column_headers used throughout the files along with a definition, units, and data type; (4) PDF and docx files for the determination of Method Detection Limits (MDLs) for TDN data, which has been updated in 2026-08; and (5) PDF and docx files for the detemination of Method Detection Limits (MDLs) for Ammonia and the Interferences by LACHAT Flow Injection Analysis. Missing values within the anion data files are noted as either "-9999" or "0.0" for not detectable (N.D.) data. There are a total of 105 locations containing TDN and Ammonia-N data. Update 2020-10-07: Updated the data files to remove times from the timestamps, so that only dates remain. The data values have not changed. Update 2021-04-11: Added Determination of Method Detection Limits (MDLs) for DIC, NPOC and TDN Analyses and Determination of Method Detection Limit for Ammonia and the Interferences by LACHAT Flow Injection Analysis documents, which can be accessed as PDFs or with Microsoft Word.Update on 6/10/2022: versioned updates to this dataset was made along with these changes: (1) updated total dissolved nitrogen and ammonia data for all locations up to 2021-12-31, (2) removal of units from column headers in datafiles, (3) added row underneath headers to contain units of variables, (4) restructure of units to comply with CSV reporting format requirements, (5) added -9999 for empty numerical cells, and (6) the addition of the file-level metadata (flmd.csv) and data dictionary (dd.csv) were added to comply with the File-Level Metadata Reporting Format. Update on 2022-09-09: Updates were made to reporting format specific files (file-level metadata and data dictionary) to correct swapped file names, add additional details on metadata descriptions on both files, add a header_row column to enable parsing, and add version number and date to file names (v2_20220909_flmd.csv and v2_20220909_dd.csv). Update on 2022-12-20: Updates were made to both the data files and reporting format specific files. Units were listed incorrectly, but have been fixed to reflect correct units (ug/L). File level metadata (flmd) and data dictionary (dd) files were updated to reflect the updated versions of these files. Available data was added up until 2022-06-01. Update on 2023-08-08: Updates were made to both the data files and reporting format specific files. New available anion data was added, up until 2023-01-05. The file level metadata and data dictionary files were updated to reflect the additional data added. Update on 2024-03-11: Updates were made to both the data files and reporting format specific files. New available anion data was added, up until 2023-10-27. Further, revisions to the data files were made to remove incorrect data points (from 1970 and 2001). The reporting format specific files were updated to reflect the additional data added. Revised versions of the PDF and docx files for determination of MDLs for TDN were added to replace previous versions. Update on 2025-05-15: Updates were made to both the data files and reporting format specific files. New available TDN and Ammonia-N data was added, up until the end of WY2024 (September 30, 2024). International Generic Sample Numbers (IGSNs), when registered, were added to the data files. The reporting format specific files were updated to reflect the additional data added. Update on 2026-09-01: Updates were made to both the data files and reporting format specific files. New available TDN and Ammonia-N data was added, up until the end of WY2025 (September 30, 2025). Updated versions, as of 2026-08-10, of the PDF and docx files for determination of MDLs for TDN data were added to this dataset.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2015

Correcting lateral response artifacts from flatbed scanners for radiochromic film dosimetry

Purpose: A known factor affecting the accuracy of radiochromic film dosimetry is the lateral response artifact (LRA) induced by nonuniform response of a flatbed scanner in the direction perpendicular to the scan direction. This work reports a practical solution to eliminate such artifacts for all forms of dose QA. Methods: EBT3 films from a single production lot (02181401) cut into rectangular 4 × 5 cm{sup 2} pieces, with the long dimension parallel to the long dimension of the original 20.3 × 25.4 cm{sup 2} sheets, were exposed at a depth of 5 cm on a Varian Trilogy at the center of a 20 × 20 cm{sup 2} open field at seven doses between 50 and 1600 cGy using 6 MV photons. These films together with an unexposed film from the same production lot were lined one next to the other on an Epson 10000XL or 11000XL scanner in portrait orientation with their long dimension parallel to the scan direction. Scanned images were then obtained with the line of films positioned at seven discrete lateral locations perpendicular to the scan direction. The process was repeated in landscape orientation and on three other Epson scanners. Data were also collected for three additional production lots of EBT3 film (11051302, 03031401, and 03171403). From measurements at the various lateral positions, the scanner response was determined as a function of the lateral position of the scanned film. For a given color channel X, the response at any lateral position L is related to the response at the center, C, of the scanner by Response(C, D, X) = A{sub L,X} + B{sub L,X}⋅Response(L, D, X), where D is dose and the coefficients A{sub L,X} and B{sub L,X} are determined from the film measurements at the center of the scanner and six other discrete lateral positions. The values at intermediate lateral positions were obtained by linear interpolation. The coefficients were determined for the red, green, and blue color channels, preserving the ability to apply triple-channel dosimetry once corrections were applied to compensate for the lateral position response artifact. To validate this method, corrections were applied to several films that were exposed to 15 × 15cm{sup 2} open fields and large IMRT and VMAT fields and scanned at the extreme edges of the scan window in addition to the central location. Calibration and response data were used to generate dose maps and perform gamma analysis using single- or triple-channel dosimetry with FilmQAPro 2014 software. Results: The authors’ study found that calibration curves at the different lateral positions could be correlated by a simple two-point rescaling using the response for unexposed film as well as the response of film exposed at high doses between 800 and 1600 cGy. The coefficients A{sub L,X} and B{sub L,X} for each color channel X were found to be independent of dose at each lateral location L. This made it possible to apply the relationship Response(C, D, X) = A{sub L,X} + B{sub L,X}⋅Response(L, D, X), to the raw film responses, permitting correction of the response values at any lateral position to an equivalent response, as if that part of the film was located at the center of the scanner. This correction method was validated for several films exposed to open as well as large IMRT and VMAT fields. Conclusions: The work reported elaborates on the process using the correction procedures to eliminate the lateral response artifact and demonstrates improvements in the accuracy of radiochromic film dosimetry for the radiation therapy quality assurance applications.

07 ISOTOPE AND RADIATION SOURCES↗
DOE OSTI2018

Computing the dipole polarizability of Ca 48 with increased precision

Here, we compute the electric dipole polarizability of 48 Ca with an increased precision by including more correlations than in previous studies. Employing the coupled-cluster method we go beyond single and double excitations and include leading-order three-particle-three-hole (3p-3h) excitations for the ground state, excited states, and the similarity-transformed operator. We study electromagnetic sum rules, such as the bremsstrahlung sum rule m 0 and the polarizability sum rule αD using interactions from chiral effective field theory. To gauge the quality of our coupled-cluster approximations we perform several benchmarks with the effective interaction hyperspherical harmonics approach in 4 He and with self consistent Green's function in 16 O. We compute the dipole polarizability of 48 Ca employing the chiral interaction N 2 LO sat and the 1.8/2.0 (EM). We find that the effect of 3p-3h excitations in the ground state is small for 1.8/2.0 (EM) but non-negligible for N 2 LO sat . The addition of these new correlations allows us to improve the precision of our 48 Ca calculations and reconcile the recently reported discrepancy between coupled-cluster results based on these interactions and the experimentally determined αD from proton inelastic scattering in 48 Ca. For the computation of electromagnetic and polarizability sum rules, the inclusion of leading-order 3p-3h excitations in the ground state is important, while it is less so for the excited states and the similarity-transformed dipole operator.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
DOE OSTI2022

High Efficiency InGaN LEDs Emitting in Green, Amber and Beyond (Final Report)

This project focuses on developing high efficiency light emitting diodes (LEDs) with green, amber, and longer wavelengths using two compatible material systems based on III-nitride and II-IV-nitride semiconductor heterostructures. The proposed approach uses low-indium-content InGaN and ZnGeN 2 or ZnSnN 2 heterostructure quantum wells (QWs) as the active regions for high efficiency green and amber LEDs, and therefore to advance high efficiency color-mixed white LED technology. This approach takes advantage of the increased flexibility, afforded by the incorporation of the II-IV-nitrides into the III-nitride layers, to tune the QW active region to lower the emission wavelengths and to increase the electron-hole wave function overlap. This strategy paves a new way to extend the InGaN QW LED emission wavelength without using high-indium-content InGaN. An industrially preferable metalorganic chemical vapor deposition (MOCVD) method was used to develop the growth of ZnGeN 2 and ZnSnN 2 that are compatible with the InGaN growth. The unique dual chamber MOCVD instrument at OSU was used in this project. This program created an opportunity for the two institutions (The Ohio State University and Case Western Reserve University) with complementary expertise to perform this work. Two graduate students (Md Rezaul Karim (OSU) and Benthara Hewage Dinushi Jayatunga (CWRU)) gained experience in MOCVD growth and various characterization methods including scanning electron microscopy, x-ray diffraction spectroscopy, x-ray photoemission spectroscopy, Hall measurements, cathodoluminescence and photoluminescence. Both students successfully defended their PhD dissertations in April/May 2021. Both Karim and Jayatunga have joined Intel as engineers in June/July 2021. Another two graduate students Kaitian Zhang (OSU) and Chenxi Hu (CWRU) joined the project team since spring 2021 to continue on this project. They were trained on MOCVD epitaxy of InGaN QWs and materials characterization including SEM, AFM, PL, CL, XRD, Hall measurements and electroluminescence. A third student, Vijay Gopal Thirupakuzi Vangipuram (OSU), who joined the group in fall 2021 to perform LED fabrication and characterization. The key research accomplishments of the project include: (1) Successful development of MOCVD epitaxy of single crystalline ZnGeN 2 and ZnSnN 2 . MOCVD growth parameters that determine the stoichiometry of ZnGeN 2 and ZnSnN 2 films were identified. (2) Experimentally determined the band offsets between GaN/ZnGeN 2 and GaN/ZnGaSnN 2 hetero-interfaces, which agree very well with the theoretical predictions. (3) Demonstrated the incorporation of thin ZnGeN 2 layer in InGaN QWs. Proof-of-concept of the InGaN-ZnGeN 2 QW design demonstrated as much as 80 nm of red shift without increasing In composition or QW thickness. (4) InGaN/ZnGeN 2 QWs emitting at 480 nm achieved IQE of 47%. Resulted from this project, 7 journal articles were published, and 9 conference papers were presented.

36 MATERIALS SCIENCE↗
NASA NTRS1974

Multiple scattering calculation of the middle ultraviolet reaching the ground

An investigation is conducted regarding the increase in the UV radiation as a function of wavelength due to changes in the amounts of ozone and various other parameters affecting the radiation in the atmosphere. Attention is given to the methods that can be used to solve the problem of the transfer of radiation through an absorbing and scattering atmosphere which includes aerosols. The multiple channel solution reported by Mudgett and Richards' (1971) is extended to vertically inhomogeneous atmospheres.

Shettle, E. P.↗
DOE OSTI2013

Time-dependent density functional theory quantum transport simulation in non-orthogonal basis

Basing on the earlier works on the hierarchical equations of motion for quantum transport, we present in this paper a first principles scheme for time-dependent quantum transport by combining time-dependent density functional theory (TDDFT) and Keldysh's non-equilibrium Green's function formalism. This scheme is beyond the wide band limit approximation and is directly applicable to the case of non-orthogonal basis without the need of basis transformation. The overlap between the basis in the lead and the device region is treated properly by including it in the self-energy and it can be shown that this approach is equivalent to a lead-device orthogonalization. This scheme has been implemented at both TDDFT and density functional tight-binding level. Simulation results are presented to demonstrate our method and comparison with wide band limit approximation is made. Finally, the sparsity of the matrices and computational complexity of this method are analyzed.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2015

The effect of Coulomb interactions on nonlinear thermovoltage and thermocurrent in quantum dots

In the present work, we theoretically study the nonlinear regime of charge transport through a quantum dot coupled to the source and drain reservoirs. The investigation is carried out using a nonequilibrium Green’s function formalism beyond the Hartree-Fock approximation. Employed approximations for the relevant Green’s functions allow to trace a transition from Coulomb blockade regime to Kondo regime in the thermoelectric transport. Effects arising when electrons move in response to thermal gradient applied across the system are discussed, including experimentally observed thermovoltage zeros.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2014

Microalgal Metabolic Network Model Refinement through High-Throughput Functional Metabolic Profiling

Metabolic modeling provides the means to define metabolic processes at a systems level; however, genome-scale metabolic models often remain incomplete in their description of metabolic networks and may include reactions that are experimentally unverified. This shortcoming is exacerbated in reconstructed models of newly isolated algal species, as there may be little to no biochemical evidence available for the metabolism of such isolates. The phenotype microarray (PM) technology (Biolog, Hayward, CA, USA) provides an efficient, high-throughput method to functionally define cellular metabolic activities in response to a large array of entry metabolites. The platform can experimentally verify many of the unverified reactions in a network model as well as identify missing or new reactions in the reconstructed metabolic model. The PM technology has been used for metabolic phenotyping of non-photosynthetic bacteria and fungi, but it has not been reported for the phenotyping of microalgae. Here, we introduce the use of PM assays in a systematic way to the study of microalgae, applying it specifically to the green microalgal model species Chlamydomonas reinhardtii. The results obtained in this study validate a number of existing annotated metabolic reactions and identify a number of novel and unexpected metabolites. The obtained information was used to expand and refine the existing COBRA-based C. reinhardtii metabolic network model iRC1080. Over 254 reactions were added to the network, and the effects of these additions on flux distribution within the network are described. The novel reactions include the support of metabolism by a number of d-amino acids, l-dipeptides, and l-tripeptides as nitrogen sources, as well as support of cellular respiration by cysteamine-S-phosphate as a phosphorus source. The protocol developed here can be used as a foundation to functionally profile other microalgae such as known microalgae mutants and novel isolates.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2023

Toward Global Regional Seismic Moment Tensor Inversion with Three-Dimensional Earth Models for Nuclear Explosion Monitoring with Sparse Networks: Demonstration of Reciprocity for Strain Greens Tensor Database Simulation with Salvus

Seismic source characterization is an essential function of global nuclear explosion monitoring (NEM). While large events (roughly with moment magnitude, M w , greater than 5.0) can often be easily detected, located and identified with high signal-to-noise ratios at teleseismic distances (> 20°), trends in NEM research require confident source characterization at much lower magnitudes (say down to 3.0) and exploitation of sparse observations (from only a few stations) at regional distance (< 20°). Regional distance waveform inversion to characterize sources is now widely used and effective (e.g. Ford et al., 2009; Alvizuri and Tape, 2018; Alvizuri et al., 2018; Chiang et al., 2018; Ford et al., 2022). These methods obtain the magnitude, depth and seismic moment tensor, which represents the forces that excited the observed seismic waves (slip on an earthquake fault, explosion, collapse or a combination of various forces). Common to many problems in seismology, the isolation of the source 2 properties requires removal of path propagation effects that waves experience while traveling through the three-dimensional (3D) Earth (the structure exists due to different rock types, material properties, temperature and tectonic processes).

58 GEOSCIENCES↗
DOE OSTI2016

The Alzheimer's Disease Neuroimaging Initiative 3: Continued innovation for clinical trial improvement

Overall, the goal of the Alzheimer's Disease Neuroimaging Initiative (ADNI) is to validate biomarkers for Alzheimer's disease (AD) clinical trials. ADNI-3, which began on August 1, 2016, is a 5-year renewal of the current ADNI-2 study. ADNI-3 will follow current and additional subjects with normal cognition, mild cognitive impairment, and AD using innovative technologies such as tau imaging, magnetic resonance imaging sequences for connectivity analyses, and a highly automated immunoassay platform and mass spectroscopy approach for cerebrospinal fluid biomarker analysis. A Systems Biology/pathway approach will be used to identify genetic factors for subject selection/enrichment. Amyloid positron emission tomography scanning will be standardized using the Centiloid method. The Brain Health Registry will help recruit subjects and monitor subject cognition. Multimodal analyses will provide insight into AD pathophysiology and disease progression. Finally, ADNI-3 will aim to inform AD treatment trials and facilitate development of AD disease-modifying treatments.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2024

SISGR: The regulation of carbon fixation in plant and green algae: Rubisco activase and the origin of heat inactivation of CO 2 assimilation

Rubisco activase (Rca) is a critical AAA+ ATPase protein complex that remodels and promotes the Rubisco enzyme, a key player in photosynthetic performance and carbon fixation. The assembly and function of the Rca protein complex are regulated by a range of factors, including subunit concentration, nucleotide-binding states, thermal conditions, metal-ion coordination, and post-translational modifications, such as phosphorylation. Despite its importance in photosynthesis, the detailed molecular mechanisms underlying the regulation of plant Rca and how it activates Rubisco remain elusive. This project aims to bridge this knowledge gap by integrating sophisticated enzymology tools with single-molecule methods and high-resolution electron microscopy to elucidate the structure and function of plant Rca. Through these multiple approaches, we have systematically investigated how the activity of plant Rca is impacted by various factors, such as phosphorylation and metal-ion coordination. The Rca complex assembly/disassembly dynamics were captured using anti-Brownian electrokinetic (ABEL) trap-based measurements, providing unprecedented insight into its structural flexibility and diverse assembly states. Furthermore, the structural analysis of Rca through electron crystallography and single-particle cryogenic electron microscopy (cryo-EM) reveals novel assembly states of the spinach Rca, providing insight into the mechanistic action for Rubisco remodeling. By combining cutting-edge tools and approaches, this work uncovers critical aspects of Rca’s regulation and assembly, paving the way for a deeper understanding of its role in photosynthetic efficiency and the potential for enhancing carbon fixation in crops.

59 BASIC BIOLOGICAL SCIENCES↗
NASA NTRS1991

Nonlinear mechanics of composite materials with periodic microstructure

This report summarizes the result of research done under NASA NAG3-882 Nonlinear Mechanics of Composites with Periodic Microstructure. The effort involved the development of non-finite element methods to calculate local stresses around fibers in composite materials. The theory was developed and some promising numerical results were obtained. It is expected that when this approach is fully developed, it will provide an important tool for calculating local stresses and averaged constitutive behavior in composites. NASA currently has a major contractual effort (NAS3-24691) to bring the approach developed under this grant to application readiness. The report has three sections. One, the general theory that appeared as a NASA TM, a second section that gives greater details about the theory connecting Greens functions and Fourier series approaches, and a final section shows numerical results.

Jordan, E. H.↗
DOE OSTI2014

Electrochemical solvent reorganization energies in the framework of the polarizable continuum model

Electron transfer reactions at electrochemical interfaces play a critical role in a wide range of catalytic processes. A key parameter in the rate constant expressions for such processes is the reorganization energy, which reflects the energetic cost of the solute and solvent rearrangements upon electron transfer. In this paper, we present dielectric continuum methods for calculating the solvent reorganization energy for electrochemical processes. We extend the simple approach in which the solute is represented as a point charge located a specified distance from the electrode surface to the representation of the solute as a collection of point charges corresponding to the partial atomic charges of the molecule. We also develop a method for calculating the electrochemical solvent reorganization energies with molecular-shaped cavities within the framework of the polarizable continuum model (PCM). The electronic and inertial responses of the solvent are separated according to their respective time scales, and two limiting cases of the relation between the solute and solvent electrons are examined. The effects of the electrode are included with the integral equations formalism PCM (IEF-PCM), in which the molecule-solvent boundary is treated explicitly, but the effects of the electrode-solvent boundary are included through an external Green’s function. This approach accounts for the effects of detailed molecular charge redistribution in a molecular-shaped cavity, as well as the electronic and inertial solvent responses and the effects of the electrode. The calculated total reorganization energies are in reasonable agreement with experimental measurements for a series of electrochemical systems. Inclusion of the effects of the electrode is found to be essential for obtaining even qualitatively accurate solvent reorganization energies. These approaches are applicable to a wide range of systems and can be extended to include other types of boundaries, such as a self-assembled monolayer or double layer separating the electrode and the molecule. This research was supported as part of the Center for Molecular Electrocatalysis, an Energy Frontier Research Center funded by the U.S. Department of Energy, Office of Science, Office of Basic Energy Sciences.

Ghosh, Soumya↗
NASA NTRS1975

Shortgrass prairie spectral measurements

The spectral methods of vegetation analysis not only measure herbage biomass on a nondestructive basis but also can be adapted to aircraft and satellite devices to map the spatial distribution over an area in an efficient and economical fashion. This study reviews the ground-based in situ field spectrometry in the 0.350-0.800 micron region of the spectrum. A statistical analysis of in situ spectroreflectance data from sample plots of the shortgrass prairie shows that green biomass, chlorophyll concentration, and leaf water content are directly interrelated to that composite property of the plot which is called functioning green biomass. Spectrocorrelation data indicate the spectral regions of optimum sensitivity for a remote estimation of the green biomass, chlorophyll, and leaf water content. The near-infrared region of the spectrum shows a high positive spectrocorrelation to these three sample parameters, regardless of the amount of standing dead vegetation.

Tucker, C. J.↗