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At least 919 records · Page 51

Development of high throughput light-sheet fluorescence lifetime imaging microscopy for 3D functional imaging of metabolic pathways in plant and microorganisms (Final Technical Report)

This research program will enable new biochemical contrast in the nanosecond lifetime domain through use of the recently demonstrated electro-optic fluorescence lifetime imaging technique (EO-FLIM) for wide-field lifetime imaging. The Stanford/Stanford Linear Accelerator Center multidisciplinary collaboration -- physics, applied physics, and structural biology -- will develop a light-sheet fluorescence lifetime imaging microscope for functional studies of microbial and plant metabolic pathways and dynamic interactions between plants and microorganisms in the rhizosphere. The proposed approach overcomes the imaging time bottleneck associated with existing fluorescence lifetime imaging methods. Initial demonstrations have shown a factor of 100,000 improvement in photon throughput compared to existing methods. High photon efficiency allowed the first wide-field fluorescence lifetime imaging of single molecules. Recent work has improved the technique’s repetition rate to enable compatibility with mode-locked lasers and demonstrated the combination of wide-field fluorescence lifetime imaging with super-resolution localization microscopy, observations of single molecule dynamics, and observation of donor lifetime quenching in single-molecule imaging. These results were achieved on standard camera sensors and would not have been possible with other wide-field approaches. The throughput and photon economy of the EO-FLIM method enables new BER-relevant imaging opportunities. In particular, scanned single- and two-photon light-sheet excitation will be used to achieve volumetric imaging with time-domain contrast.

47 OTHER INSTRUMENTATION↗

Birefringing arising from the reorientation of the polarizability anisotropy of molecules in collisionless gases

The refractive index change in a collisionless gas is evaluated from the Stark shifts of the rotational energy levels that arise from the polarizability anisotropy. For the limit of an extremely short-duration excitation, a multilevel coherent effect resulted in delayed refractive index bursts. Both stationary and transient responses of this birefringence to an optical field were considered for symmetric top molecules, with particular emphasis on the special case of linear molecules.

Lin, C. H.↗

Quantitative determination of smoke and toxic product potential of materials with the AMINCO (registered) NBS smoke density chamber

Quantitative measurements of smoke obscuration produced by standard area samples under high energy pyrolysis both with and without an ignition source, using a collimated vertical light beam in conjunction with an ultra-linear photomultiplier microphotometer are obtainable with the smoke density chamber. Results are expressed in dimensionless specific optical density permitting usage calculations in accordance with a geometric relationship.

Greenberg, S.↗

Atmospheric effects on cluster analyses

Ground reflected radiance, from which information is extracted through techniques of cluster analyses for remote sensing application, is altered by the atmosphere when it reaches the satellite. Therefore it is essential to understand the effects of the atmosphere on Landsat measurements, cluster characteristics and analysis accuracy. A doubling model is employed to compute the effective reflectivity, observed from the satellite, as a function of ground reflectivity, solar zenith angle and aerosol optical thickness for standard atmosphere. The relation between the effective reflectivity and ground reflectivity is approximately linear. It is shown that for a horizontally homogeneous atmosphere, the classification statistics from a maximum likelihood classifier remains unchanged under these transforms. If inhomogeneity is present, the divergence between clusters is reduced, and correlation between spectral bands increases. Radiance reflected by the background area surrounding the target may also reach the satellite. The influence of background reflectivity on effective reflectivity is discussed.

Kiang, R. K.↗

Phase linear interferometer experiment maintenance and calibration manual

This manual describes the necessary procedures for assuring continuous lightning sferics data collection at Marshall Space Flight Center. The phase linear interferometer experiment is under evaluation as a candidate RF sensor to support the space based optical lightning mapper system.

Goodman, S. J.↗

Criteria for the use of regression analysis for remote sensing of sediment and pollutants

An examination of limitations, requirements, and precision of the linear multiple-regression technique for quantification of marine environmental parameters is conducted. Both environmental and optical physics conditions have been defined for which an exact solution to the signal response equations is of the same form as the multiple regression equation. Various statistical parameters are examined to define a criteria for selection of an unbiased fit when upwelled radiance values contain error and are correlated with each other. Field experimental data are examined to define data smoothing requirements in order to satisfy the criteria of Daniel and Wood (1971). Recommendations are made concerning improved selection of ground-truth locations to maximize variance and to minimize physical errors associated with the remote sensing experiment.

Whitlock, C. H.↗

Two-layer viscous instability in a rotating couette device

A novel experiment to study the interfacial shear instability between two liquids is described. Density-matched immiscible liquids are confined between concentric cylinders such that the interface is parallel to the cylinder walls. Interfacial waves that develop because of viscosity differences between the shearing fluids are studied as a function of rotation rate and depth ratio using optical techniques. Conditions neutral stability and the most unstable wavenumber agree reasonably well with predictions from linear stability analysis of the Navier-Stokes equations. Illumination using laser sheets allows precise measurement of the interface shape. Future experiments will verify the correctness of weakly nonlinear theories that describe energy transfer and saturation of wave growth by nonlinear effects. Measurements of solitary wave shapes, that occur far above neutral stability, will be compared to similar measurements for systems that have gravity as an important force to determine how gravity effects large disturbances. These results will be used to interpret slug and annular flow data that have been obtained in other mu g studies.

Gallagher, Christopher↗

Net Radiative Effects of Dust in the Tropical North Atlantic Based on Integrated Satellite Observations and in Situ Measurements

In this study, we integrate recent in situ measurements with satellite retrievals of dust physical and radiative properties to quantify dust direct radiative effects on shortwave (SW) and longwave (LW) radiation (denoted as DRESW and DRELW, respectively) in the tropical North Atlantic during the summer months from 2007 to 2010. Through linear regression of the CERES-measured top-of atmosphere (TOA) flux versus satellite aerosol optical depth (AOD) retrievals, we estimate the instantaneous DRESW efficiency at the TOA to be -49+/-7.1 W/sq.m AOD(exp -1) and -36+/-4:8W/sq.m AOD(exp -1) based on AOD from MODIS and CALIOP, respectively. We then perform various sensitivity studies based on recent measurements of dust particle size distribution (PSD), refractive index, and particle shape distribution to determine how the dust microphysical and optical properties affect DRE estimates and its agreement with the above-mentioned satellite-derived DREs. Our analysis shows that a good agreement with the observation-based estimates of instantaneous DRESW and DRELW can be achieved through a combination of recently observed PSD with substantial presence of coarse particles, a less absorptive SW refractive index, and spheroid shapes. Based on this optimal combination of dust physical properties we further estimate the diurnal mean dust DRE(sub SW) in the region of -10W/sq.m at TOA and -26W/sq.m at the surface, respectively, of which ~30% is canceled out by the positive DRE(sub LW). This yields a net DRE of about -6:9 and -18.3 W/sq.m at TOA and the surface, respectively. Our study suggests that the LW flux contains useful information on dust particle size, which could be used together with SW observations to achieve a more holistic understanding of the dust radiative effect.

Song, Qianqian↗

Topology-Accelerated and Selective Cascade Depolymerization of Architecturally Complex Polyesters

Despite considerable recent advances already made in developing chemically circular polymers (CPs), the current framework predominantly focuses on CPs with linear-chain structures of different monomer types. As polymer properties are determined by not only composition but also topology, manipulating the topology of the single-monomer-based CP systems from linear-chain structures to architecturally complex polymers could potentially modulate the resulting polymer properties without changing the chemical composition, thereby advancing the concept of monomaterial product design. To that end, here, we introduce a chemically circular hyperbranched polyester (HBPE), synthesized by a mixed chain-growth and step-growth polymerization of a rationally designed bicyclic lactone with a pendent hydroxyl group (BiLOH). This HBPE exhibits full chemical recyclability despite its architectural complexity, showing quantitative selectivity for regeneration of BiLOH, via a unique cascade depolymerization mechanism. Moreover, distinct differences in materials properties and performance arising from topological variations between HBPE, hb-PBiLOH, and its linear analogue, l-PBiLOH, have been revealed where generally the branched structure led to more favorable interchain interactions, and topology-amplified optical activity has also been observed for chiral (1S, 4S, 5S)-hb-PBiLOH. More intriguingly, depolymerization of l-PBiLOH proceeds through an unexpected, initial topological transformation to the HBPE polymer, followed by the faster cascade depolymerization pathway adopted by hb-PBiLOH. Overall, these results demonstrate that CP design can go beyond typical linear polymers, and rationally redesigned, architecturally complex polymers for their unique properties may synergistically impart advantages in topology-augmented depolymerization acceleration and selectivity for exclusive monomer regeneration.

depolymerization↗

High-Temperature Linear Receiver Enabled by Multicomponent Aerogels

Concentrating solar thermal (CST) technology has significant potential mainly due to its dispatchability and low cost of storage. However, to compete with other sources, including utility-scale solar PV, its final cost (cents/kWh) still needs to be lowered. Cost reduction can be achieved by improving the system level efficiency of the CST plants through the deployment of advanced power cycles, which operate at high temperatures of ~700°C. However, optical, and thermal losses pose a major challenge to the efficiency of such CST systems. The overall aim of this project is to investigate and de-risk a linear solar receiver concept called an Aerogel Insulated Receiver (AIR) that generates high temperatures (up to 700°C) at a low solar concentration ratio (<100) and with a high collection efficiency (optical × receiver). Our prior work has demonstrated the thermal stability1 and optical and heat-insulating properties2,3 of transparent aerogel insulation at a one-inch scale. The focus of this work is on (1) co-optimization of the geometry of the aerogel tile and receiver enclosure to fit a standard parabolic collector (PTC), (2) scale-up of aerogels into 4-inch tiles while preserving key properties, (3) experimental measurement of receiver heat loss (W/m) in a >70-cm test stand and validation of anticipated receiver performance at high temperatures. Regarding (1), appropriate optical and thermal models for a parabolic trough receiver (PTR) are developed and validated. The geometry of the aerogels and the receiver enclosure are co-optimized to maximize the collection efficiency. The model predicts a 54% collection efficiency at 700°C for an AIR design based on flat aerogels. By combining the collection efficiency with the power block efficiency of supercritical CO 2 cycles, we predict >10% improvements in peak plant efficiency relative to existing line-focusing CST systems. The application of curved plasmonic aerogels is predicted to further increase the collection efficiency to 64%. Regarding (2), we demonstrate the successful development of 6-inch-long refractory aerogel tiles with optical, thermal, and stability characteristics consistent with our prior work. This scale-up requires a transition to a larger ALD station and modifying the ALD process variables such as exposure time and the number of precursor doses. Regarding (3), we design and develop an AIR test stand measuring 3 feet in length. Heat loss performance analysis is carried out using the test stand. The results indicate that aerogel insulation can significantly reduce receiver thermal losses at the high operating temperatures required for next-generation PTRs. The experimental results agree with the heat loss performance predicted by our receiver model. Lastly, we conducted preliminary failure mode and effects (FMEA) and techno-economic (TEA) analyses to identify failure mitigation strategies and commercial opportunities, respectively. Overall, this project identifies key opportunities and challenges in deploying aerogel insulating receivers in next-generation line-focusing CST technologies.

14 SOLAR ENERGY↗

Rotational Millimeter-Wave Shoe Scanner Using the Discrete Fourier Transform for Backprojection-Based Image Reconstruction

An active 3D microwave / millimeter-wave shoe scanner was previously developed at the Pacific Northwest National Laboratory (PNNL) using two linear arrays scanned over a rectilinear aperture. The radar system chirps a frequency sweep from 10-40 GHz. These frequencies allow imaging through optically opaque material such as leather, rubber, plastics, and other dielectrics. The system was designed to detect concealed items in the soles of shoes while allowing people to leave their shoes on through a security checkpoint. To shrink the footprint of the system, a new iteration of the design has been developed that scans the two linear arrays over a circular aperture. This new footprint opens the possibility of it being installed in the floor of a cylindrical millimeter-wave body scanner. The backprojection-based multilayer dielectric image reconstruction developed at PNNL can easily handle arbitrary spatial sampling, accommodating the new rotational shoe scanner design. Commonly, the fast Fourier transform (FFT) is used to efficiently compute the range response from the data collected by the system as a preprocessing step to the backprojection algorithm. It was found that converting to range using the discrete Fourier transform (DFT) directly has some advantages over the FFT. For example, nonlinear and non-uniform frequency sweeps can easily be compensated for during the computation of the DFT and only the range bins of interest need to be computed and their spacing can be chosen arbitrarily. Because the range conversion step of the image reconstruction is the fastest part of the process there is very little speed penalty for using the DFT over the FFT and it can even increase the speed of image reconstruction when the ranges of interest are fewer than the total span that is calculated in the FFT.

Millimeter-wave imaging, microwave imaging, shoe s↗

Optical design of the SBUV/TOMS experiment on Nimbus G

The paper examines the tradeoffs performed in optimizing the optical design of the solar backscatter ultraviolet/total ozone mapping spectrometer (SBUV/TOMS) experiment on Nimbus G to stringent performance requirements within the limitations of the spacecraft interface. The SBUV portion of the experiment incorporates a double monochromator optimized for better than 1.0 A spectral resolution over the wavelength range 1600-4000 A. The TOMS portion of the experiment is a stepped line scanning system with a 105-deg total field of view. Special techniques are used to reduce the polarization sensitivity of the instrument to less than 5% for 100% linearly polarized incident radiation and to keep the spectral stray light to less than 0.000001 of the incident solar spectrum. Optical material selection is imperative in order to minimize the effects of fluorescence and phosphorescence arising from the bombardment of particulate radiation in space.

Henderson, B. D.↗

Models of polarized infrared emission from bipolar nebulae

Many stars with circumstellar dust shells show a high degree of linear polarization (Sato et al. 1985). We are developing a model which assumes that the polarization arises from scattering by circumstellar dust. Our model assumes a geometry in which the star is surrounded by an optically thin spherical dust shell and embedded within an optically thick disk. This geometry is consistent with that proposed for objects with bipolar molecular outflow. This is important because many bipolar flow objects have also been observed to be highly polarized. The high degree of linear polarization is produced because the disk differentially attenuates the light from the star. The light incident from the point source is attenuated by a factor of exp(-tau/cos theta) where theta is the angle between a ray from the point source to the scatterer and a ray normal to the disk; tau is the optical depth at the wavelength of interest. Hence, the light scattered from the regions directly above and below the disk give the largest contribution to the total flux. The scattering angle for light from these regions is near 90 deg., so the light is strongly polarized and, in the Rayleigh scattering regime, is polarized parallel to the disk. The Stokes parameters for the scattered light from each particle in the shell are calculated by using the scattering matrix elements generated by a Mie scattering program. After the Stokes parameters for each particle are computed they are summed to give the Stokes parameters for the entire shell. Two graphs are presented which show the intensity and polarization spectrum generated by our model using the optical constants for astronomical silicates as defined by Draine and Lee (1984).

Burns, M. S.↗

Alignment Mirror Mechanisms for Space Use

The paper describes an optical Alignment Mirror Mechanism (AMM), and discusses its control scheme. The mirror's angular positioning accuracy requirement is +/- 0.2 arc-sec. This requires the mirror's linear positioning actuators to have a positioning accuracy of +/- 109 nm to enable the mirror to meet the angular tip/tilt accuracy requirement. Demonstrated capabilities are +/- 35 nm linear positioning capability at the actuator, which translates into +/- 0.07 arc-sec angular mirror positioning accuracy.

optical mounts↗

Shock effects on hydrous minerals and implications for carbonaceous meteorites

The effect of shock loading over the pressure range of 29-59 GPa on the shock-recovered specimens of antigorite serpentine, Mg3Si2O5(OH)4, were investigated employing infrared (IR) spectroscopy, thermogravimetric analysis, and optical and scanning electron microscopy. With increasing shock pressure, there was an increase in H2O IR absorption peaks at the expense of OH peaks, while the changes in SiO bond vibration modes were identical to those seen for other, nonhydrous minerals. Thermogravimetric results on vented assembly samples showed linear relationships between the shock pressure and both the length of dehydration interval and the effective activation energy for releasing post-shock structural water. Optical and scanning electron microscopy revealed gas bubbles, which appeared to be injected into zones of partial melting, and vesicular dark veins distributed throughout the shocked samples. It is suggested that shock loading of hydrous minerals would release and redistribute free water in the regoliths of carbonaceous chondrite parent bodies, giving rise to observed hydrous alterations.

Lange, M. A.↗

Optically thick ablation fronts

The physical characteristics of optically thick ablation fronts such as interstellar clouds are analyzed. Attention is given to cold clumps in both planar and spherical geometries and modifications caused by accelerations in a gravitational field or by evaporation of the clumps when encountered hot gas. The effects of ablation on the appearance of the Rayleigh-Taylor instability are examined in both linear and nonlinear regimes. The results of the calculations are applied to the astrophysical phenomena of cold clumps immersed in a supersonic flow, optically thick jets, and ablation in stellar envelopes. Evaporation in an optically thick front is projected to be orders of magnitude larger than evaporation in electron-conduction fronts in optically thin conditions. The optically thick processes could then be useful for modeling flows from, e.g., newly formed stars and active galactic nuclei.

Konigl, A.↗

Toward witnessing molecular exciton entanglement from spectroscopy

Entanglement is a defining feature of quantum mechanics that can be a resource in engineered and natural systems, but measuring entanglement in experiment remains elusive especially for large chemical systems. Most practical approaches require determining and measuring a suitable entanglement witness which provides some level of information about the entanglement structure of the probed state. A fundamental quantity of quantum metrology is the quantum Fisher information (QFI), which is a rigorous witness of multipartite entanglement that can be evaluated from linear response functions for certain states. Here, in this paper, we explore measuring the QFI of molecular exciton states of the first-excitation subspace from spectroscopy. In particular, we utilize the fact that the linear response of a pure state subject to a weak electric field over all possible driving frequencies encodes the variance of the collective dipole moment in the probed state, which is a valid measure for QFI. The systems that are investigated include the molecular dimer, N-site linear aggregate with nearest-neighbor coupling, and N-site circular aggregate, all modeled as a collection of interacting qubits. Our theoretical analysis shows that the variance of the collective dipole moment in the brightest dipole-allowed eigenstate is the maximum QFI. The optical response of a thermally equilibrated state in the first-excitation subspace is also a valid QFI. Theoretical predictions of the measured QFI for realistic linear dye aggregates as a function of temperature and energetic disorder due to static variations of the host matrix show that two- to three-partite entanglement is realizable. This paper lays some groundwork and inspires measurement of multipartite entanglement of molecular excitons with ultrafast pump-probe experiments.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Are the World's Oceans Optically Different?

Regional differences in the Sea-viewing Wide Field-of-view Sensor chlorophyll algorithm uncertainty were observed in a large global data set containing coincident in situ measurements of chlorophyll a concentration (Chla) and spectral radiometry. The uncertainty was found to be systematic when the data were sorted by ocean: Atlantic, Pacific, Southern, and Indian Oceans. Artifacts associated with different instrumentation and analytical methods had been previously ruled out. Given these oceanic biases in the chlorophyll algorithm, we hypothesized that the oceans may be optically different, and their optical differences may be intrinsically related to regional differences in phytoplankton community structure or biogeochemical processes. The oceanic biases, originally observed using radiometric measurements, were independently verified using total absorption measurements in a subset of the data. Moreover, they were explained through oceanic differences in the absorption of colored detrital matter (CDM) and phytoplankton. Both effects were considered together in explaining the ocean biases through a stepwise linear regression analysis. Significant oceanic differences in the amount of CDM and in phytoplankton cell sizes and pigmentation would give rise to optical differences, but we raise a concern for the spatial coverage of the data. We do not suggest the application of ocean-based algorithms but rather emphasize the importance of consolidating regional data sets before reaching this conclusion.

Szeto, M.↗