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At least 919 records · Page 51

Improving the accessibility and transferability of machine learning algorithms for identification of animals in camera trap images: MLWIC2

Motion-activated wildlife cameras (or “camera traps”) are frequently used to remotely and noninvasively observe animals. The vast number of images collected from camera trap projects has prompted some biologists to employ machine learning algorithms to automatically recognize species in these images, or at least filter-out images that do not contain animals. These approaches are often limited by model transferability, as a model trained to recognize species from one location might not work as well for the same species in different locations. Furthermore, these methods often require advanced computational skills, making them inaccessible to many biologists. We used 3 million camera trap images from 18 studies in 10 states across the United States of America to train two deep neural networks, one that recognizes 58 species, the “species model,” and one that determines if an image is empty or if it contains an animal, the “empty-animal model.” Our species model and empty-animal model had accuracies of 96.8% and 97.3%, respectively. Furthermore, the models performed well on some out-of-sample datasets, as the species model had 91% accuracy on species from Canada (accuracy range 36%–91% across all out-of-sample datasets) and the empty-animal model achieved an accuracy of 91%–94% on out-of-sample datasets from different continents. Our software addresses some of the limitations of using machine learning to classify images from camera traps. By including many species from several locations, our species model is potentially applicable to many camera trap studies in North America. We also found that our empty-animal model can facilitate removal of images without animals globally. We provide the trained models in an R package (MLWIC2: Machine Learning for Wildlife Image Classification in R), which contains Shiny Applications that allow scientists with minimal programming experience to use trained models and train new models in six neural network architectures with varying depths.

59 BASIC BIOLOGICAL SCIENCES↗

Improving E3SM Land Model Photosynthesis Parameterization via Satellite SIF, Machine Learning, and Surrogate Modeling

The parameterization of key photosynthesis parameters is one of the key uncertain sources in modeling ecosystem gross primary productivity (GPP). Solar-induced chlorophyll fluorescence (SIF) offers a good proxy for GPP since it marks the actual process of photosynthesis; while machine learning (ML) provides a robust approach to model the GPP-SIF relationship. Here, we trained the boosted regressing tree (BRT) and the Random Forest ML models with Greenhouse Gases Observing Satellite SIF data and in situ GPP observations from 49 eddy covariance towers. These trained ML GPP-SIF models were fed into the Energy Exascale Earth System Model (E3SM) Land Model (ELM) to generate ELM-simulated global SIF estimates, which were then benchmarked against satellite SIF observations with a surrogate modeling approach. Our results indicated good modeling performance of the ML-based GPP-SIF relationship. The ELM model when fed with the ML GPP-SIF models also can well predict the spatial-temporal variations in SIF. We also found high model accuracy for the surrogate modeling. Model parameter sensitivity analysis suggested that the fraction of leaf nitrogen in RuBisCO (flnr) is the most sensitive parameter to the SIF; other sensitive parameters include the Ball-Berry stomatal conductance slope (mbbopt) and the vcmax entropy (vcmaxse). The posterior uncertainty in simulated GPP was greatly reduced after benchmarking, and the model produced improved spatial patterns of mean GPP relative to FLUXCOM GPP. Our integrated approach provides a new avenue for improving land models and using remote-sensing SIF, which can be further improved in the future with more ground- and satellite-based observations.

54 ENVIRONMENTAL SCIENCES↗

CovTransformer: A transformer model for SARS-CoV-2 lineage frequency forecasting

With hundreds of SARS-CoV-2 lineages circulating in the global population, there is an ongoing need for predicting and forecasting lineage frequencies and thus identifying rapidly expanding lineages. Accurate prediction would allow for more focused experimental efforts to understand pathogenicity of future dominating lineages and characterize the extent of their immune escape. Here, we first show that the inherent noise and biases in lineage frequency data make a commonly-used regression-based approach unreliable. To address this weakness, we constructed a machine learning model for SARS-CoV-2 lineage frequency forecasting, called CovTransformer, based on the transformer architecture. We designed our model to navigate challenges such as a limited amount of data with high levels of noise and bias. We first trained and tested the model using data from the UK and the USA, and then tested the generalization ability of the model to many other countries and US states. Remarkably, the trained model makes accurate predictions two months into the future with high levels of accuracy both globally (in 31 countries with high levels of sequencing effort) and at the US-state level. Our model performed substantially better than a widely used forecasting tool, the multinomial regression model implemented in Nextstrain, demonstrating its utility in SARS-CoV-2 monitoring. Assuming a newly emerged lineage is identified and assigned, our test using retrospective data shows that our model is able to identify the dominating lineages 7 weeks in advance on average before they became dominant. Overall, our work demonstrates that transformer models represent a promising approach for SARS-CoV-2 forecasting and pandemic monitoring.

60 APPLIED LIFE SCIENCES↗

Importance of different parameterization changes for the updated dust cycle modeling in the Community Atmosphere Model (version 6.1)

Abstract. The Community Atmosphere Model (CAM6.1), the atmospheric component of the Community Earth System Model (CESM; version 2.1), simulates the life cycle (emission, transport, and deposition) of mineral dust and its interactions with physio-chemical components to quantify the impacts of dust on climate and the Earth system. The accuracy of such quantifications relies on how well dust-related processes are represented in the model. Here we update the parameterizations for the dust module, including those on the dust emission scheme, the aerosol dry deposition scheme, the size distribution of transported dust, and the treatment of dust particle shape. Multiple simulations were undertaken to evaluate the model performance against diverse observations, and to understand how each update alters the modeled dust cycle and the simulated dust direct radiative effect. The model–observation comparisons suggest that substantially improved model representations of the dust cycle are achieved primarily through the new more physically-based dust emission scheme. In comparison, the other modifications induced small changes to the modeled dust cycle and model–observation comparisons, except the size distribution of dust in the coarse mode, which can be even more influential than that of replacing the dust emission scheme. We highlight which changes introduced here are important for which regions, shedding light on further dust model developments required for more accurately estimating interactions between dust and climate.

54 ENVIRONMENTAL SCIENCES↗

Evaluation of turbulence models for three primary types of shock-separated boundary layers

Zero-equation (algebraic), one-equation (kinetic energy), and two-equation (kinetic energy plus length scale) turbulence eddy viscosity models were used in computing three basic types of shock-separated boundary-layer flows. The three basic types of shock boundary-layer interaction discussed are: (1) a normal shock wave at transonic speeds, (2) a compression corner shock at supersonic speeds, and (3) an incident oblique shock at hypersonic speeds. The models tested are simple, unmodified models used extensively for incompressible, unseparated flows. A comparison of computed and measured results for the compressible, separated flows described herein indicates that model performance is dependent on flow configuration with no distinct superiority of one model over the other for all three flow configurations.

Coakley, T. J.↗

The measurement of aircraft performance and stability and control after flight through natural icing conditions

The effects of airframe icing on the performance and stability and control of a twin-engine commuter-class aircraft were measured by the NASA Lewis Research Center. This work consisted of clear air tests with artificial ice shapes attached to the horizontal tail, and natural icing flight tests in measured icing clouds. The clear air tests employed static longitudinal flight test methods to determine degradation in stability margins for four simulated ice shapes. The natural icing flight tests employed a data acquisition system, which was provided under contract to NASA by Kohlman Systems Research Incorporated. This system used a performance modeling method and modified maximum likelihood estimation (MMLE) technique to determine aircraft performance degradation and stability and control. Flight test results with artificial ice shapes showed that longitudinal, stick-fixed, static margins are reduced on the order of 5 percent with flaps up. Natural icing tests with the KSR system corroborated these results and showed degradation in the elevator control derivatives on the order of 8 to 16 percent depending on wing flap configuration. Performance analyses showed the individual contributions of major airframe components to the overall degration in lift and drag.

Ranaudo, R. J.↗

The measurement of aircraft performance and stability and control after flight through natural icing conditions

The effects of airframe icing on the performance and stability and control of a twin-engine commuter-class aircraft were measured by the NASA Lewis Research Center. This work consisted of clear air tests with artificial ice shapes attached to the horizontal tail, and natural icing flight tests in measured icing clouds. The clear air tests employed static longitudinal flight test methods to determine degradation in stability margins for four simulated ice shapes. The natural icing flight tests employed a data acquisition system, which was provided under contract to NASA by Kohlman Systems Research Incorporated. This system used a performance modeling method and modified maximum likelihood estimation (MMLE) technique to determine aircraft performance degradation and stability and control. Flight test results with artificial ice shapes showed that longitudinal, stick-fixed, static margins are reduced on the order of 5 percent with flaps up. Natural icing tests with the KSR system corroborated these results and showed degradation in the elevator control derivatives on the order of 8 to 16 percent depending on wing flap configuration. Performance analyses showed the individual contributions of major airframe components to the overall degradation in lift and drag.

Ranaudo, R. J.↗

Vector performance analysis of three supercomputers - Cray-2, Cray Y-MP, and ETA10-Q

Results are presented of a series of experiments to study the single-processor performance of three supercomputers: Cray-2, Cray Y-MP, and ETA10-Q. The main object of this study is to determine the impact of certain architectural features on the performance of modern supercomputers. Features such as clock period, memory links, memory organization, multiple functional units, and chaining are considered. A simple performance model is used to examine the impact of these features on the performance of a set of basic operations. The results of implementing this set on these machines for three vector lengths and three memory strides are presented and compared. For unit stride operations, the Cray Y-MP outperformed the Cray-2 by as much as three times and the ETA10-Q by as much as four times for these operations. Moreover, unlike the Cray-2 and ETA10-Q, even-numbered strides do not cause a major performance degradation on the Cray Y-MP. Two numerical algorithms are also used for comparison. For three problem sizes of both algorithms, the Cray Y-MP outperformed the Cray-2 by 43 percent to 68 percent and the ETA10-Q by four to eight times.

Fatoohi, Rod A.↗

System performance predictions for Space Station Freedom's electric power system

Space Station Freedom Electric Power System (EPS) capability to effectively deliver power to housekeeping and user loads continues to strongly influence Freedom's design and planned approaches for assembly and operations. The EPS design consists of silicon photovoltaic (PV) arrays, nickel-hydrogen batteries, and direct current power management and distribution hardware and cabling. To properly characterize the inherent EPS design capability, detailed system performance analyses must be performed for early stages as well as for the fully assembled station up to 15 years after beginning of life. Such analyses were repeatedly performed using the FORTRAN code SPACE (Station Power Analysis for Capability Evaluation) developed at the NASA Lewis Research Center over a 10-year period. SPACE combines orbital mechanics routines, station orientation/pointing routines, PV array and battery performance models, and a distribution system load-flow analysis to predict EPS performance. Time-dependent, performance degradation, low earth orbit environmental interactions, and EPS architecture build-up are incorporated in SPACE. Results from two typical SPACE analytical cases are presented: (1) an electric load driven case and (2) a maximum EPS capability case.

Kerslake, Thomas W.↗

Turbulence Model Predictions of Strongly Curved Flow in a U-Duct

The ability of three types of turbulence models to accurately predict the effects of curvature on the flow in a U-duct is studied. An explicit algebraic stress model performs slightly better than one- or two-equation linear eddy viscosity models, although it is necessary to fully account for the variation of the production-to-dissipation-rate ratio in the algebraic stress model formulation. In their original formulations, none of these turbulence models fully captures the suppressed turbulence near the convex wall, whereas a full Reynolds stress model does. Some of the underlying assumptions used in the development of algebraic stress models are investigated and compared with the computed flowfield from the full Reynolds stress model. Through this analysis, the assumption of Reynolds stress anisotropy equilibrium used in the algebraic stress model formulation is found to be incorrect in regions of strong curvature. By the accounting for the local variation of the principal axes of the strain rate tensor, the explicit algebraic stress model correctly predicts the suppressed turbulence in the outer part of the boundary layer near the convex wall.

Rumsey, Christopher L.↗

Anticipatory Eye Movements in Interleaving Templates of Human Behavior

Performance modeling has been made easier by architectures which package psychological theory for reuse at useful levels of abstraction. CPM-GOMS uses templates of behavior to package at a task level (e.g., mouse move-click, typing) predictions of lower-level cognitive, perceptual, and motor resource use. CPM-GOMS also has a theory for interleaving resource use between templates. One example of interleaving is anticipatory eye movements. This paper describes the use of ACT-Stitch, a framework for translating CPM-GOMS templates and interleaving theory into ACT-R, to model anticipatory eye movements in skilled behavior. The anticipatory eye movements explain performance in a well-practiced perceptual/motor task, and the interleaving theory is supported with results from an eye-tracking experiment.

Matessa, Michael↗

Importance of Different Parameterization Changes for the Updated Dust Cycle Modeling in the Community Atmosphere Model (Version 6.1)

The Community Atmosphere Model (CAM6.1), the atmospheric component of the Community Earth System Model (CESM; version 2.1), simulates the life cycle (emission, transport, and deposition) of mineral dust and its interactions with physio-chemical components to quantify the impacts of dust on climate and the Earth system. The accuracy of such quantifications relies on how well dust-related processes are represented in the model. Here we update the parameterizations for the dust module, including those on the dust emission scheme, the aerosol dry deposition scheme, the size distribution of transported dust, and the treatment of dust particle shape. Multiple simulations were undertaken to evaluate the model performance against diverse observations, and to understand how each update alters the modeled dust cycle and the simulated dust direct radiative effect. The model–observation comparisons suggest that substantially improved model representations of the dust cycle are achieved primarily through the new more physically-based dust emission scheme. In comparison, the other modifications induced small changes to the modeled dust cycle and model–observation comparisons, except the size distribution of dust in the coarse mode, which can be even more influential than that of replacing the dust emission scheme. We highlight which changes introduced here are important for which regions, shedding light on further dust model developments required for more accurately estimating interactions between dust and climate.

mineral dust parameterizations↗

Carbon Dioxide Active Remote Sensing Using Pulsed 2-µm Lidar

A pulsed 2-µm Integrate Path Differential Absorption (IPDA) lidar was developed at NASA Langley Research Center for high-accuracy and high-precision measurements of atmospheric carbon dioxide (CO 2 ). The instrument targets the R30 CO 2 absorption line and implements high-energy tunable on-line transmitter and advanced HgCdTe avalanche photodiode receiver. During 2019 airborne validation campaign, the IPDA was tested over the ocean for retrieving the weighted-average column dry-air volume mixing ratio of CO 2 (XCO 2 ) from 4.5 km altitude. XCO 2 measurement resulted in 404.43 ± 1.23 ppm using 10 s average, as compared to 405.49 ppm from prediction models. This translates to 0.26% and 0.30% relative accuracy and precision, respectively. Performance models were updated to scale the IPDA technology assuming operation from space platform. Results present XCO 2 measurements using the instrument capabilities considering different target scenarios for Earth’s surface. This demonstrates the potential for the IPDA technique and technology to achieve sustained global CO 2 measurement.

Active Remote Sensing↗

Carbon Dioxide Active Remote Sensing Using Pulsed 2-µm Lidar

A pulsed 2-µm Integrate Path Differential Absorption (IPDA) lidar was developed at NASA Langley Research Center for high-accuracy and high-precision measurements of atmospheric carbon dioxide (CO 2 ). The instrument targets the R30 CO 2 absorption line and implements high-energy tunable on-line transmitter and advanced HgCdTe avalanche photodiode receiver. During 2019 airborne validation campaign, the IPDA was tested over the ocean for retrieving the weighted-average column dry-air volume mixing ratio of CO 2 (XCO 2 ) from 4.5 km altitude. XCO 2 measurement resulted in 404.43 ± 1.23 ppm using 10 s average, as compared to 405.49 ppm from prediction models. This translates to 0.26% and 0.30% relative accuracy and precision, respectively. Performance models were updated to scale the IPDA technology assuming operation from space platform. Results present XCO 2 measurements using the instrument capabilities considering different target scenarios for Earth’s surface. This demonstrates the potential for the IPDA technique and technology to achieve sustained global CO 2 measurement.

Active Remote Sensing↗

Clifford Neural Operators on Atmospheric Data Influenced Partial Differential Equations

Mathematical representations of the atmosphere are key to forecasting and research tasks across Earth science. Numerically solving the underlying partial differential equations(PDEs) of the atmosphere, however, can be difficult and computationally expensive with numerous trade-offs between computing efficiency and accuracy. Utilizing neural net-works to learn approximations of the PDE solutions from the data can help us model complex phenomena more efficiently than traditional numerical schemes. Here, we have applied Clifford algebra-based neural operators for predicting atmospheric variables. Clifford Fourier neural operators are used with two different backbone architectures, ResNet and UNet, on custom data of U10, V10 and surface pressure as well as U500, V500 and Z500. Clifford Fourier neural operators, coupled with ResNet and UNet architectures, are applied to a key reanalysis dataset. Model performance is initially strong, but we observe increasing errors, resulting in the model becoming highly unstable.

Sujit Roy↗

Measurement of Wind Loading on Heliostats at the Crescent Dunes Power Plant: An Overview

The cost of solar collectors constitutes almost one third of the total cost of a CSP plant. One of the ongoing challenges in the design of these collectors is wind loading on mirrors, support structures, and drives. A particular challenge is dynamic wind loading, caused by the turbulent wind flow. To date, the design of solar collector structures has relied on wind tunnel experiments and numerical simulations that do not entirely capture the dynamic effects observed at scale. The CSP industry has shown increased interest in validating the idealized assumptions with measurements obtained in operational settings to improve wind load assumptions and increase reliability and cost-efficiency of the collector design. Further, performance models need realistic assumptions about wind loading and its impact on optical performance. In a parabolic trough field campaign, NREL successfully collected a wealth of long-term, high-resolution wind and loads data [2], that are publicly available and that can be used for the above-mentioned purposes. Heliostats are impacted differently by wind than parabolic troughs, due to their different shape, size, and field layout. To study the impact of wind and turbulence on heliostats, we initiated another field campaign in an operational power- tower plant, Crescent Dunes, in Nevada, USA. In this work, we present an overview of the measurements, first results, and potential implications of wind driven loads on Heliostats.

concentrated solar power↗

Evaluating three evapotranspiration estimates from model of different complexity over China using the ILAMB benchmarking system

The land surface models range in complexity of terrestrial evapotranspiration, yet it is unknown how model complexity translates to accuracy of modeled evapotranspiration estimates. Here, we use the International Land Model Benchmarking system to assess ET estimates from three models of varying complexity driven by the same forcing datasets: an earth system model, a terrestrial biosphere model, and a stand-alone ET model. The performance assessment includes both temporal and spatial evaluation, and different plant functional types across China. Our results indicate that the most complex model, an earth system model, performed best against the benchmarking datasets and metrics. Terrestrial biosphere model performed best in simulating inter-annual variability of ET, while earth system model performed best in simulating the seasonal cycle. The more complex models (earth system model and terrestrial biosphere model) perform better in forest, shrub and crop ecosystems, while the simpler model (stand-alone ET model) perform better in grass ecosystems. Our study demonstrates the impact of model complexity on ET estimates and highlights directions for future ET model improvements.

54 ENVIRONMENTAL SCIENCES↗

Dry in-pile fracture test (DRIFT) for separate-effects validation of ceramic fuel fracture models

Fracture is an important component of nuclear fuel behavior, and significant efforts have been invested into developing fuel performance models that are capable of accurately representing fracture. Usable data on the process of fracture propagation in nuclear fuel under realistic service conditions are very limited. To address this need, a series of separate-effects experiments were developed and performed at Idaho National Laboratory's Transient Reactor Test (TREAT) facility. These experiments employ a heat sink to radially remove heat from the fuel in a manner that approximates the effect of coolant in an operating light-water reactor (LWR). The test holder for these experiments is known as the Dry In-pile Fracture Test (DRIFT). A series of experiments employing DRIFT and TREAT were performed to provide data on the extent and nature of fracture in fresh fuel at various points during a ramp to full power. Novel aspects of these experiments include the way they employ a heat sink to replicate steady-state LWR conditions, as well as the use of fiber optic sensors for in-reactor thermal instrumentation. Details on the development of this experiment, experimental conditions, and resulting data (including in situ thermal measurements and post-irradiation imaging of fracture) are provided in this work. LWR-equivalent powers ranging from 10 to 25 kW/m were tested using this apparatus. Cracking was visible at all power levels, with increasing cracking extent as the power level increased, although there was little difference in the cracking between the two highest-power tests, which had LWR-equivalent powers of 20 and 25 kW/m.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗