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At least 919 records · Page 51

Non-equilibrium plasma generation via nano-second multi-mode laser pulses

The formation and growth of plasma kernels generated via nano-second mode-beating laser pulses is investigated here via a non-equilibrium self-consistent computational model. Chemically reactive Navier–Stokes equations are used to describe the hydrodynamics, and non-equilibrium effects are taken into account with a two-temperature model. Inverse Bremsstrahlung and multiphoton ionization are included self-consistently in the model via a coupled solution of the plasma governing equations and the radiative transfer equation (that describes the laser beam propagation and attenuation). A self-consistent approach (despite carrying additional challenges) minimizes the empiricism and it allows for a more accurate description since it prevents both the utilization of artificial plasma seeds to trigger the breakdown and the implementation of tuning parameters to simulate the laser-energy deposition. The advantages of this approach are confirmed by the good agreement between the numerically predicted and the experimentally measured plasma boundary evolution and absorbed energy. This also holds true for the periodic plasma kernel structures that, as suggested by the experiments and confirmed by the simulations presented here, are connected to the modulating frequency.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

On finite-dimensional smoothed-particle Hamiltonian reductions of the Vlasov equation

The inclusion of spatial smoothing in finite-dimensional particle-based Hamiltonian reductions of the Vlasov equation and related models is considered. Here, this work investigates the underlying Hamiltonian structure of such smoothed particle-based methods for Hamiltonian systems and the small-scale regularization such methods implicitly make in approximating the continuum theory. In the context of the Vlasov–Poisson equation and other mean-field Lie–Poisson systems, of which Vlasov–Poisson is a special case, smoothing amounts to a convolutive regularization of the Hamiltonian. This regularization may be interpreted as a change of the inner product structure used to identify the dual space in the Lie–Poisson Hamiltonian formulation. In particular, the shape function used for spatial smoothing may be identified as the kernel function of a reproducing kernel Hilbert space whose inner product is used to define the Lie–Poisson Hamiltonian structure. It is likewise possible to introduce smoothing in the Vlasov–Maxwell system, but in this case the Poisson bracket must be modified rather than the Hamiltonian. The smoothing applied to the Vlasov–Maxwell system is incorporated by inserting smoothing in the map from canonical to kinematic coordinates. In the filtered system, the Lorentz force law and the current, the two terms coupling the Vlasov equation with Maxwell’s equations, are spatially smoothed.

Hamiltonian mechanics↗

A meshless stochastic method for Poisson–Nernst–Planck equations

A plethora of biological, physical, and chemical phenomena involve transport of charged particles (ions). Its continuum-scale description relies on the Poisson–Nernst–Planck (PNP) system, which encapsulates the conservation of mass and charge. The numerical solution of these coupled partial differential equations is challenging and suffers from both the curse of dimensionality and difficulty in efficiently parallelizing. We present a novel particle-based framework to solve the full PNP system by simulating a drift–diffusion process with time- and space-varying drift. We leverage Green’s functions, kernel-independent fast multipole methods, and kernel density estimation to solve the PNP system in a meshless manner, capable of handling discontinuous initial states. The method is embarrassingly parallel, and the computational cost scales linearly with the number of particles and dimension. We use a series of numerical experiments to demonstrate both the method’s convergence with respect to the number of particles and computational cost vis-à-vis a traditional partial differential equation solver.

Chemistry↗

Extending GPU-accelerated Gaussian integrals in the TeraChem software package to f type orbitals: Implementation and applications

Here, the increasing availability of graphics processing units (GPUs) for scientific computing has prompted interest in accelerating quantum chemical calculations through their use. However, the complexity of integral kernels for high angular momentum basis functions often limits the utility of GPU implementations with large basis sets or for metal containing systems. In this work, we report the implementation of f function support in the GPU-accelerated TeraChem software package through the development of efficient kernels for the evaluation of Hamiltonian integrals. The high efficiency of the resulting code is demonstrated through density functional theory (DFT) calculations on increasingly large organic molecules and transition metal complexes, as well as coupled cluster singles and doubles calculations on water clusters. Preliminary investigations into Ni(I) catalysis with DFT and the photochemistry of MnH(CH 3 ) with complete active space self-consistent field are also carried out. Overall, our GPU-accelerated software appears to be well-suited for fast simulation of large transition metal containing systems, as well as organic molecules.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Data-driven parameterization of the generalized Langevin equation

Significance The generalized Langevin equation (GLE) provides a precise description of coarse-grained variable dynamics in reduced dimension models. However, computation of the memory kernel poses a major challenge to the practical use of the GLE. This paper presents a data-driven approach to compute the memory kernel, relying on a hierarchy of parameterized rational approximations in terms of the Laplace transform, which can be expanded to arbitrarily high order as necessary. This parameterization makes it convenient to represent the GLE via an extended stochastic model where the memory term is eliminated by properly introducing auxiliary variables. The present method is well-suited for constructing reduced models for nonequilibrium properties of complex systems such as biomolecules, chemical reaction networks, and climate simulations.

97 MATHEMATICS AND COMPUTING↗

Ab initio generalized Langevin equation

We introduce a machine learning–based approach called ab initio generalized Langevin equation (AIGLE) to model the dynamics of slow collective variables (CVs) in materials and molecules. In this scheme, the parameters are learned from atomistic simulations based on ab initio quantum mechanical models. Force field, memory kernel, and noise generator are constructed in the context of the Mori–Zwanzig formalism, under the constraint of the fluctuation–dissipation theorem. Combined with deep potential molecular dynamics and electronic density functional theory, this approach opens the way to multiscale modeling in a variety of situations. Here, we demonstrate this capability with a study of two mesoscale processes in crystalline lead titanate, namely the field-driven dynamics of a planar ferroelectric domain wall, and the dynamics of an extensive lattice of coarse-grained electric dipoles. In the first case, AIGLE extends the reach of ab initio simulations to a regime of noise-driven motions not accessible to molecular dynamics. In the second case, AIGLE deals with an extensive set of CVs by adopting a local approximation for the memory kernel and retaining only short-range noise correlations. The scheme is computationally more efficient than molecular dynamics by several orders of magnitude and mimics the microscopic dynamics at low frequencies where it reproduces accurately the dominant far-infrared absorption frequency.

97 MATHEMATICS AND COMPUTING↗

Are turbulence effects on droplet collision–coalescence a key to understanding observed rain formation in clouds?

Rain formation is a critical factor governing the lifecycle and radiative forcing of clouds and therefore it is a key element of weather and climate. Cloud microphysics–turbulence interactions occur across a wide range of scales and are challenging to represent in atmospheric models with limited resolution. Based on past experiments and idealized numerical simulations, it has been postulated that cloud turbulence accelerates rain formation by enhancing drop collision–coalescence. We provide substantial evidence for significant impacts of turbulence on the evolution of cloud droplet size distributions and rain formation by comparing high-resolution observations of cumulus congestus clouds with state-of-the-art large-eddy simulations coupled with a Lagrangian particle-based microphysics scheme. Turbulent coalescence must be included in the model to accurately represent the observed drop size distributions, especially for drizzle drop sizes at lower heights in the cloud. Turbulence causes earlier rain formation and greater rain accumulation compared to simulations with gravitational coalescence only. The observed rain size distribution tail just above cloud base follows a power law scaling that deviates from theoretical scalings considering either a purely gravitation collision kernel or a turbulent kernel neglecting droplet inertial effects, providing additional evidence for turbulent coalescence in clouds. In contrast, large aerosols acting as cloud condensation nuclei (“giant CCN”) do not significantly impact rain formation owing to their long timescale to reach equilibrium wet size relative to the lifetime of rising cumulus thermals. Overall, turbulent drop coalescence exerts a dominant influence on rain initiation in warm cumulus clouds, with limited impacts of giant CCN.

54 ENVIRONMENTAL SCIENCES↗

A Diethylene Glycol Condensation Particle Counter for Rapid Sizing of sub-3 nm Atmospheric Clusters

AbstractThis paper describes the modification of a laminar flow, thermally diffusive universal-fluid condensation particle counter (standard operation: 50% detection efficiency at 5 nm) to rapidly measure the size distribution of sub 3 nm aerosol. Sub 3 nm detection was achieved by using diethylene glycol as the working fluid, which enabled high instrument super-saturations while minimizing homogenous nucleation of the working fluid; a detection efficiency of 50% was achieved at 1.6 nm with laboratory-generated ammonium sulfate aerosol. Rapid aerosol sizing beneath 3 nm was achieved by inverting the measured grown droplet size distribution (1 second sampling) to recover the sampled aerosol size distribution. The developed inversion algorithm utilizes analytical kernel functions determined from the instrument response to pseudo-monodisperse ammonium sulfate aerosol from 1.5 nm to 20 nm, generated by a high resolution DMA and a nano DMA. The inversion algorithm was tested numerically with assumed, idealized aerosol size distributions consistent with observed new particle formation events, yielding reasonable agreement between inverted and assumed aerosol size distributions below 3 nm. Furthermore, this technique provides a measure of the aerosol size assuming an aerosol composition identical to that of the aerosol used to generate the experimentally determined kernel function.

54 ENVIRONMENTAL SCIENCES↗

TURBULENCE-INDUCED RELATIVE VELOCITY OF DUST PARTICLES. I. IDENTICAL PARTICLES

We study the relative velocity of inertial particles suspended in turbulent flows and discuss implications for dust particle collisions in protoplanetary disks. We simulate a weakly compressible turbulent flow, evolving 14 particle species with friction timescale, τ{sub p}, covering the entire range of scales in the flow. The particle Stokes numbers, St, measuring the ratio of τ{sub p} to the Kolmogorov timescale, are in the range 0.1 ∼< St ∼< 800. Using simulation results, we show that the model by Pan and Padoan gives satisfactory predictions for the rms relative velocity between identical particles. The probability distribution function (PDF) of the relative velocity is found to be highly non-Gaussian. The PDF tails are well described by a 4/3 stretched exponential function for particles with τ{sub p} ≅ 1-2 T{sub L}, where T{sub L} is the Lagrangian correlation timescale, consistent with a prediction based on PP10. The PDF approaches Gaussian only for very large particles with τ{sub p} ∼> 54 T{sub L}. We split particle pairs at given distances into two types with low and high relative speeds, referred to as continuous and caustic types, respectively, and compute their contributions to the collision kernel. Although amplified by the effect of clustering, the continuous contribution vanishes in the limit of infinitesimal particle distance, where the caustic contribution dominates. The caustic kernel per unit cross section rises rapidly as St increases toward ≅ 1, reaches a maximum at τ{sub p} ≅ 2 T{sub L}, and decreases as τ{sub p}{sup -1/2} for τ{sub p} >> T{sub L}.

79 ASTRONOMY AND ASTROPHYSICS↗

determining the mass of kepler-78b with nonparametric Gaussian process estimation

Kepler-78b is a transiting planet that is 1.2 times the radius of Earth and orbits a young, active K dwarf every 8 hr. The mass of Kepler-78b has been independently reported by two teams based on radial velocity (RV) measurements using the HIRES and HARPS-N spectrographs. Due to the active nature of the host star, a stellar activity model is required to distinguish and isolate the planetary signal in RV data. Whereas previous studies tested parametric stellar activity models, we modeled this system using nonparametric Gaussian process (GP) regression. We produced a GP regression of relevant Kepler photometry. We then use the posterior parameter distribution for our photometric fit as a prior for our simultaneous GP + Keplerian orbit models of the RV data sets. We tested three simple kernel functions for our GP regressions. Based on a Bayesian likelihood analysis, we selected a quasi-periodic kernel model with GP hyperparameters coupled between the two RV data sets, giving a Doppler amplitude of 1.86 ± 0.25 m s{sup −1} and supporting our belief that the correlated noise we are modeling is astrophysical. The corresponding mass of 1.87{sub −0.26}{sup +0.27} M{sub ⊕} is consistent with that measured in previous studies, and more robust due to our nonparametric signal estimation. Based on our mass and the radius measurement from transit photometry, Kepler-78b has a bulk density of 6.0{sub −1.4}{sup +1.9} g cm{sup −3}. We estimate that Kepler-78b is 32% ± 26% iron using a two-component rock-iron model. This is consistent with an Earth-like composition, with uncertainty spanning Moon-like to Mercury-like compositions.

79 ASTRONOMY AND ASTROPHYSICS↗

A TWO-RIBBON WHITE-LIGHT FLARE ASSOCIATED WITH A FAILED SOLAR ERUPTION OBSERVED BY ONSET, SDO, AND IRIS

Two-ribbon brightenings are one of the most remarkable characteristics of an eruptive solar flare and are often used to predict the occurrence of coronal mass ejections (CMEs). Nevertheless, it was recently called into question whether all two-ribbon flares are eruptive. In this paper, we investigate a two-ribbon-like white-light (WL) flare that is associated with a failed magnetic flux rope (MFR) eruption on 2015 January 13, which has no accompanying CME in the WL coronagraph. Observations by the Optical and Near-infrared Solar Eruption Tracer and the Solar Dynamics Observatory reveal that with the increase of the flare emission and the acceleration of the unsuccessfully erupting MFR, two isolated kernels appear at the WL 3600 Å passband and quickly develop into two elongated ribbon-like structures. The evolution of the WL continuum enhancement is completely coincident in time with the variation of Fermi hard X-ray 26–50 keV flux. An increase of continuum emission is also clearly visible at the whole FUV and NUV passbands observed by the Interface Region Imaging Spectrograph. Moreover, in one WL kernel, the Si iv, C ii, and Mg ii h/k lines display significant enhancement and non-thermal broadening. However, their Doppler velocity pattern is location-dependent. At the strongly bright pixels, these lines exhibit a blueshift, while at moderately bright ones, the lines are generally redshifted. These results show that the failed MFR eruption is also able to produce a two-ribbon flare and high-energy electrons that heat the lower atmosphere, causing the enhancement of the WL and FUV/NUV continuum emissions and chromospheric evaporation.

79 ASTRONOMY AND ASTROPHYSICS↗

THE INTERNAL ROTATION PROFILE OF THE B-TYPE STAR KIC 10526294 FROM FREQUENCY INVERSION OF ITS DIPOLE GRAVITY MODES

The internal angular momentum distribution of a star is the key to determining its evolution. Fortunately, stellar internal rotation can be probed through studies of rotationally split nonradial oscillation modes. In particular, the detection of nonradial gravity modes (g modes) in massive young stars has recently become feasible thanks to the Kepler space mission. Our goal is to derive the internal rotation profile of the Kepler B8V star KIC 10526294 through asteroseismology. We interpret the observed rotational splittings of its dipole g modes using four different approaches based on the best seismic models of the star and their rotational kernels. We show that these kernels can resolve differential rotation within the radiative envelope if a smooth rotational profile is assumed and if the observational errors are small. Based on Kepler data, we find that the rotation rate near the core-envelope boundary is well constrained to 163 ± 89 nHz. The seismic data are consistent with rigid rotation but a profile with counter-rotation within the envelope has a statistical advantage over constant rotation. Our study should be repeated for other massive stars with a variety of stellar parameters in order to determine the physical conditions that control the internal rotation profile of young massive stars, with the aim of improving the input physics of their models.

79 ASTRONOMY AND ASTROPHYSICS↗

Data mining graphene: Correlative analysis of structure and electronic degrees of freedom in graphenic monolayers with defects

The link between changes in the material crystal structure and its mechanical, electronic, magnetic, and optical functionalities known as the structure-property relationship is the cornerstone of the contemporary materials science research. The recent advances in scanning transmission electron and scanning probe microscopies (STEM and SPM) have opened an unprecedented path towards examining the materials structure property relationships on the single-impurity and atomic-configuration levels. Lacking, however, are the statistics-based approaches for cross-correlation of structure and property variables obtained in different information channels of the STEM and SPM experiments. Here we have designed an approach based on a combination of sliding window Fast Fourier Transform, Pearson correlation matrix, linear and kernel canonical correlation, to study a relationship between lattice distortions and electron scattering from the SPM data on graphene with defects. Our analysis revealed that the strength of coupling to strain is altered between different scattering channels which can explain coexistence of several quasiparticle interference patterns in the nanoscale regions of interest. In addition, the application of the kernel functions allowed us extracting a non-linear component of the relationship between the lattice strain and scattering intensity in graphene. Lastly, the outlined approach can be further utilized to analyzing correlations in various multi-modal imaging techniques where the information of interest is spatially distributed and has usually a complex multidimensional nature.

36 MATERIALS SCIENCE↗

Shock generated vorticity in spark discharges

Spark discharges induce a complex flow field consisting of a shock wave at early times (~ 1 μs), a pair of vortex rings, and a hot gas kernel. The vortex rings entrain ambient gas into the hot gas kernel and control its cooling and expansion. In this work, we investigate the shock wave's contribution in producing the vortex ring vorticity. We analyze high-speed (700 kHz) schlieren images of the shock wave for a range of electrical energies to measure the shock properties and estimate shock velocity and curvature. These measurements are combined with a model to calculate the vorticity generated. The measurements show that the highest vorticity is generated near the peak shock curvature location, and the shock curvature and strength increase with electrical energy deposited. A comparison of the vorticity estimated from the model to vorticity measurements from stereoscopic particle image velocimetry shows the results to be statistically equivalent. Furthermore, this suggests that the shock curvature and velocity contribute to the vortex rings induced by spark discharges.

42 ENGINEERING↗

On the modes of nanosecond pulsed plasmas for combustion ignition of quiescent CH 4 -air mixtures

The effect of transient plasma modes on ignition kernel development are discussed here for a quiescent CH 4 -air combustion model system. A 10 ns high-voltage pulse was applied to a pin-to-pin electrode in lean fuel-air mixtures at room temperature and atmospheric pressure. High-impedance streamer, transient spark and low-impedance spark discharges were identified based on pulse waveforms of voltage and current. A sustained ignition kernel expansion was observed when the plasma discharge transitioned into a transient spark or spark discharge. The minimum ignition energy was obtained at the transient spark mode, which has less than a third of the energy or Coulomb transfer compared to the low-impedance spark. Employing repetitive 10-pulse sequence at 10 kHz, the lean-fuel limit was extended from an equivalence ratio of 0.6 for the single pulse ignition to 0.5. The use of repetitive pulses also allowed streamer breakdown or spark initiation to occur at a lower voltage.

CH 4↗

Fast algorithms for evaluating the stress field of dislocation lines in anisotropic elastic media

In dislocation dynamics (DD) simulations, the most computationally intensive step is the evaluation of the elastic interaction forces among dislocation ensembles. Because the pair-wise interaction between dislocations is long-range, this force calculation step can be significantly accelerated by the fast multipole method (FMM). In this study, we implemented and compared four different methods in isotropic and anisotropic elastic media: one based on the Taylor series expansion (Taylor FMM), one based on the spherical harmonics expansion (Spherical FMM), one kernel-independent method based on the Chebyshev interpolation (Chebyshev FMM), and a new kernel-independent method that we call the Lagrange FMM. The Taylor FMM is an existing method, used in ParaDiS, one of the most popular DD simulation softwares. The Spherical FMM employs a more compact multipole representation than the Taylor FMM does and is thus more efficient. However, both the Taylor FMM and the Spherical FMM are difficult to derive in anisotropic elastic media because the interaction force is complex and has no closed analytical formula. The Chebyshev FMM requires only being able to evaluate the interaction between dislocations and thus can be applied easily in anisotropic elastic media. But it has a relatively large memory footprint, which limits its usage. The Lagrange FMM was designed to be a memory-efficient black-box method. Lastly, various numerical experiments are presented to demonstrate the convergence and the scalability of the four methods.

97 MATHEMATICS AND COMPUTING↗

The intrinsic matter bispectrum in ΛCDM

We present a fully relativistic calculation of the matter bispectrum at second order in cosmological perturbation theory assuming a Gaussian primordial curvature perturbation. For the first time we perform a full numerical integration of the bispectrum for both baryons and cold dark matter using the second-order Einstein-Boltzmann code, SONG. We review previous analytical results and provide an improved analytic approximation for the second-order kernel in Poisson gauge which incorporates Newtonian nonlinear evolution, relativistic initial conditions, the effect of radiation at early times and the cosmological constant at late times. Our improved kernel provides a percent level fit to the full numerical result at late times for most configurations, including both equilateral shapes and the squeezed limit. We show that baryon acoustic oscillations leave an imprint in the matter bispectrum, making a significant impact on squeezed shapes.

79 ASTRONOMY AND ASTROPHYSICS↗

Clustering in massive neutrino cosmologies via Eulerian Perturbation Theory

We introduce an Eulerian Perturbation Theory to study the clustering of tracers for cosmologies in the presence of massive neutrinos. Our approach is based on mapping recently-obtained Lagrangian Perturbation Theory results to the Eulerian framework. We add Effective Field Theory counterterms, IR-resummations and a biasing scheme to compute the one-loop redshift-space power spectrum. To assess our predictions, we compare the power spectrum multipoles against synthetic halo catalogues from the QUIJOTE simulations, finding excellent agreement on scales k ≲ 0.25 h Mpc-1. One can obtain the same fitting accuracy using higher wave-numbers, but then the theory fails to give a correct estimation of the linear bias parameter. We further discuss the implications for the tree-level bispectrum. Finally, calculating loop corrections is computationally costly, hence we derive an accurate approximation wherein we retain only the main features of the kernels, as produced by changes to the growth rate. As a result, we show how FFTLog methods can be used to further accelerate the loop computations with these reduced kernels.

79 ASTRONOMY AND ASTROPHYSICS↗