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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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Somatic Mutation Analysis in Spaceflight: NASA Twins Genome Study

The NASA Twins Genome Study investigates the effects of spaceflight on somatic mutation accumulation by comparing genome-wide sequence data from a spaceflight astronaut and his Earth-bound twin. Utilizing advanced computational software on high performance computers, this study identifies and maps somatic mutations, with implications for understanding spaceflight-associated health risks, including cancer, neurodegeneration, and cardiovascular disease. The findings aim to bridge rodent and human space research, offering insights into tissue-specific pathophysiology, risk models, and potential therapeutic interventions.

somatic mutation↗
DOE OSTI2023

Towards Lightweight Data Integration Using Multi-Workflow Provenance and Data Observability

Modern large-scale scientific discovery requires multidisciplinary collaboration across diverse computing facilities, including High Performance Computing (HPC) machines and the Edge-to-Cloud continuum. Integrated data analysis plays a crucial role in scientific discovery, especially in the current AI era, by enabling Responsible AI development, FAIR, Reproducibility, and User Steering. However, the heterogeneous nature of science poses challenges such as dealing with multiple supporting tools, cross-facility environments, and efficient HPC execution. Building on data observability, adapter system design, and provenance, we propose MIDA: an approach for lightweight runtime Multi-workflow Integrated Data Analysis. MIDA defines data observability strategies and adaptability methods for various parallel systems and machine learning tools. With observability, it intercepts the dataflows in the background without requiring instrumentation while integrating domain, provenance, and telemetry data at runtime into a unified database ready for user steering queries. We conduct experiments showing end-to-end multi-workflow analysis integrating data from Dask and MLFlow in a real distributed deep learning use case for materials science that runs on multiple environments with up to 276 GPUs in parallel. We show near-zero overhead running up to 100,000 tasks on 1,680 CPU cores on the Summit supercomputer.

Santos Souza, Renan↗
DOE OSTI2023

Integrating Artificial Intelligence into Science Gateways

Science gateways are altering the manner in which people interact with high performance computing (HPC) by providing a web browser based interface to advanced computing platforms. In particular, science gateways lower the barrier to using HPC by simplifying the process of submitting workloads to such systems and by offloading the efforts required to use HPC to the maintainers of the system. While science gateways decrease the time-to-science that comes with using such advanced systems, progress can still be made in improving the user's experience. In this paper we explore two strategies for integrating artificial intelligence tools commonly found in non-HPC service workflows: voice activated assistants and chatbots. Since August 2021, the HPC group at Idaho National Laboratory answers an average of 581 support tickets per month of which a large percentage could be addressed via these two strategies. This work defines the key capabilities that an HPC voice activated assistant and chatbot would need to address for a userbase consisting of largely non-expert users as well as a design for integration into the Open OnDemand science gateway.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2018

DuoModel: Leveraging Reduced Model for Data Reduction and Re-Computation on HPC Storage

High-performance computing (HPC) applications generate large amounts of floating-point data that need to be stored and analyzed efficiently to extract the insights and advance knowledge discovery. With the growing disparities between compute and I/O, optimizing the storage stack alone may not suffice to cure the I/O problem. There has been a strong push in the HPC communities to perform data reduction before data is transmitted to storage in order to lower the I/O cost. However, as of now, neither lossless nor lossy compressors can achieve the adequate reduction ratio that is desired by applications. This paper proposes DuoModel, a new approach that leverages the similarity between the full and reduced application models, and further improve the data reduction ratio. DouModel further improves the compression ratio of state-of-the-art compressors via compressing the differences (termed as delta) between the data products of the two models. For data analytics, the high fidelity data can be re-computed by launching the reduced model and applying the compressed delta. Our evaluations confirm that DuoModel can further push the limit of data reduction while the high fidelity of data is maintained.

Luo, Huizhang (ORCID:0000000323920267)↗
DOE OSTI2025

Defining quantum-ready primitives for hybrid HPC-QC supercomputing: a case study in Hamiltonian simulation

As computational demands in scientific applications continue to rise, hybrid high-performance computing (HPC) systems integrating classical and quantum computers (HPC-QC) are emerging as a promising approach to tackling complex computational challenges. One critical area of application is Hamiltonian simulation, a fundamental task in quantum physics and other large-scale scientific domains. This paper investigates strategies for quantum-classical integration to enhance Hamiltonian simulation within hybrid supercomputing environments. By analyzing computational primitives in HPC allocations dedicated to these tasks, we identify key components in Hamiltonian simulation workflows that stand to benefit from quantum acceleration. To this end, we systematically break down the Hamiltonian simulation process into discrete computational phases, highlighting specific primitives that could be effectively offloaded to quantum processors for improved efficiency. Our empirical findings provide insights into system integration, potential offloading techniques, and the challenges of achieving seamless quantum-classical interoperability. We assess the feasibility of quantum-ready primitives within HPC workflows and discuss key barriers such as synchronization, data transfer latency, and algorithmic adaptability. These results contribute to the ongoing development of optimized hybrid solutions, advancing the role of quantum-enhanced computing in scientific research.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2021

Extended Applications of Subgrid Representation in the 2D/1D Method

Recent efforts in MPACT have focused on improving the performance of the 2D/1D subplane implementation to help target computational performance goals. Here, we build on previous efforts that targeted the use of subgrid treatments to improve the accuracy of control rod representation, presenting three additional applications of subgrid treatments with the goal of reducing the computational burden of simulations. These subgrid applications include treatment of spacer grids, thermal feedback, and axial reflector material representation. With these approaches, a single method of characteristics (MOC) plane can contain several different materials axially that are represented explicitly via subgrids on the coarse mesh finite difference (CMFD) mesh but are axially homogenized on the MOC mesh. This allows for a substantial reduction in the number of MOC planes needed in the calculation through the introduction of an approximate treatment, particularly with regard to the self-shielded cross sections and MOC-informed radial current coupling coefficients in CMFD. Several test problems ranging from single rod to quarter core are used to assess the solution accuracy and performance of these various subgrid representations. Overall, the accuracy of the approximations seems very reasonable, with extremely small differences in eigenvalue observed and maximum pin power errors in the 0.5% to 1.0% range. Several cases show substantial value in the compromise between accuracy and computational performance. Others highlight the new computational hurdles that future research will aim to resolve.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗