Engineering Papers⌕ Search

SEARCH · Engineering Papers

Results for “spectral data”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 901 records · Page 50
All sourcesNASA NTRSDOE OSTI
DOE OSTI2021

Neutron-Resonance Transmission Analysis with a Compact Deuterium-Tritium Neutron Generator

Neutron Resonance Transmission Analysis (NRTA) is a spectroscopic technique which uses the resonant absorption of neutrons in the epithermal range to infer the isotopic composition of an object. This spectroscopic technique has relevance in many traditional fields of science and nuclear security. NRTA in the past made use of large, expensive accelerator facilities to achieve precise neutron beams, significantly limiting its applicability. Here, we describe a series of NRTA experiments where we use a compact, low-cost deuterium-tritium (DT) neutron generator to produce short neutron beams (2.6 m) along with a 6 Li-glass neutron detector. The time-of-flight spectral data from five elements – silver, cadmium, tungsten, indium, and 238 U – clearly show the corresponding absorption lines in the 1-30 eV range. The experiments show the applicability of NRTA in this simplified configuration, and prove the feasibility of this compact and low-cost approach. This could significantly broaden the applicability of NRTA, and make it practical and applicable in many fields, such as material science, nuclear engineering, and arms control.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
DOE OSTI2018

Rapid determination of soil classes in soil profiles using vis–NIR spectroscopy and multiple objectives mixed support vector classification

Summary Visible‐near infrared (vis–NIR) spectroscopy can reveal various soil properties and facilitate soil classification. However, few studies have attempted to classify vertical soil profiles that contain several genetic horizons. Here, we propose the ‘multiple objectives mixed support vector classification’ (MOM–SVC) method to classify soil profiles. A total of 130 soil profiles were collected from genetic horizons in Zhejiang Province, China. After laboratory analysis, soil profiles were classified according to the Chinese Soil Taxonomy system. Vis–NIR spectra were recorded from each genetic horizon of each soil profile and were then pre‐processed. We performed the MOM–SVC method as follows: (i) created a support vector machine (SVM) model (one‐versus‐one approach) using spectral data from all soil horizons in calibration profiles, (ii) applied the SVM model on each horizon of the profile to be predicted, (iii) extracted ‘votes’ from each horizon and mixed (or summarized) them into the votes of each profile to be predicted and (iv) classified each profile by the majority‐voting method. We also investigated whether the additional input of auxiliary soil information (e.g. moist soil colour, soil organic matter and soil texture), which could be measured easily or be well predicted by vis–NIR spectroscopy, could improve the accuracy of soil classification when combined with it. Independent validation results showed that the MOM–SVC method performed better at the soil order level than at the suborder level. Adding auxiliary soil information to the classification model improved the overall accuracy of classification at the soil order level. The proposed MOM–SVC method provides a fast objective diagnostic of soil classes for use in soil surveys and can help to update soil databases when a more objective soil classification system is developed. Highlights The MOM–SVC method can be used to classify soil profiles objectively with a variety of soil horizons. Stratified random sampling was used to quantify prediction uncertainty in classification MOM–SVC can predict soil orders with greater accuracy than suborders. Adding auxiliary soil information into the classification model improved prediction accuracy.

Chen, S.↗
DOE OSTI2016

Optoheterodyne Doppler measurements of the ballistic expansion of the products of the shock wave-induced surface destruction: Experiment and theory

The results of optoheterodyne Doppler measurements of the ballistic expansion of the products of surface destruction under shock-wave loading are presented. The possibility of determining the physical characteristics of a rapidly flying dust cloud, including the microparticle velocities, the microparticle sizes, and the areal density of the dust cloud, is shown. A compact stand for performing experiments on shock-wave loading of metallic samples is described. Shock-wave loading is performed by a 100-µm-thick tantalum flyer plate accelerated to a velocity of 2.8 km/s. As the samples, lead plates having various thicknesses and the same surface roughness are used. At a shock-wave pressure of 31.5 GPa, the destruction products are solid microparticles about 50 µm in size. At a pressure of 42 and 88 GPa, a liquid-drop dust cloud with a particle size of 10–15 µm is formed. To interpret the spectral data on the optoheterodyne Doppler measurements of the expansion of the surface destruction products (spalled fragments, dust microparticles), a transport equation for the function of mutual coherence of a multiply scattered field is used. The Doppler spectra of a backscattered signal are calculated with the model developed for the dust cloud that appears when a shock wave reaches the sample surface at the parameters that are typical of an experimental situation. Qualitative changes are found in the spectra, depending on the optical thickness of the dust cloud. The obtained theoretical results are in agreement with the experimental data.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗
DOE OSTI2021

Computing Edge States without Hard Truncation

We present a numerical method which accurately computes the discrete spectrum and associated bound states of semi-infinite Hamiltonians which model electronic “edge” states localized at boundaries of one- and two-dimensional crystalline materials. The problem is nontrivial since arbitrarily large finite “hard” (Dirichlet) truncations of the Hamiltonian in the infinite bulk direction tend to produce spurious bound states partially supported at the truncation. Our method, which overcomes this difficulty, is to compute the Green's function of the semi-infinite Hamiltonian by imposing an appropriate boundary condition in the bulk direction; then, the spectral data is recovered via Riesz projection. We demonstrate our method's effectiveness by studies of edge states at a graphene zig-zag edge in the presence of defects modeled both by a discrete tight-binding model and a continuum PDE model under finite difference discretization. Our method may also be used to study states localized at domain wall-type edges in one- and two-dimensional materials where the edge Hamiltonian is infinite in both directions; we demonstrate this for the case of a tight-binding model of distinct honeycomb structures joined along a zig-zag edge. Here, we expect our method to be useful for designing novel devices based on precise wave-guiding by edge states.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2018

GlyQ-IQ

GlyQ-IQ is a program that performs a targeted, chromatographic centric search of mass spectral data for glycans. It is designed for high resolution LC-MS datasets. The software uses a list of glycan targets to search for expected features in MS1 spectra. Features are characterized by monoisotopic mass, elution time, and isotopic fit score. Features are annotated by glycan family relationships and optionally by in-source fragmentation patterns.

Monroe, Matthew↗
DOE OSTI2018

Sipper

SIPPER can be used to automatically detect and quantify partially labeled C13 peptides in a single dataset. It includes a GUI for manual visualization and annotation of detected LC-MS features. It also includes a Simple MS Viewer for exploring mass spectral data. Supports Thermo .Raw files, plus also mzXML, mzML, and mz5.

Monroe, Matthew↗
DOE OSTI2022

pnnl/Chemometric_Toolbox

The PNNL Chemometric Toolbox is a software collection of common MATLAB scripts that implement core chemometric algorithms for regression analysis. The three core regression techniques within this toolbox are classical least squares (CLS), principal component regression (PCR), and partial least squares (PLS). This is demonstrated using a supplied dataset of infrared (FTIR) spectral data with their corresponding concentrations

Smith, Ian↗
DOE OSTI2022

EMSL-Computing/nmRanalysis

R package that serves as wrapper for rDolphin, an open-source R package that performs semiautomated quantification of metabolites represented within Nuclear Magnetic Resonance (NMR) spectral data

Winans, Natalie↗
DOE OSTI2013

Gamma-ray spectral analysis algorithm library

The routines of the Gauss Algorithms library are used to implement special purpose products that need to analyze gamma-ray spectra from Ge semiconductor detectors as a part of their function. These routines provide the ability to calibrate energy, calibrate peakwidth, search for peaks, search for regions, and fit the spectral data in a given region to locate gamma rays.

Egger, A.E.↗
DOE OSTI2023

Gamma-ray Spectrum Explanations (GRSE) v0.1

This code repository provides tools for producing various types of machine learning model explanations trained on gamma-ray spectra. It includes implementations of saliency mapping, Grad-CAM, LIME, and Kernel SHAP, including improvements and clarifications to some of the approaches that are specific to their use with gamma-ray spectral data. These tools are in support of the manuscript M.S. Bandstra et al., "Explaining machine-learning models for gamma-ray detection and identification," under review at PLOS ONE.

Bandstra, Mark↗
DOE OSTI2025

ChemEcho v1.0

ChemEcho is a tool that converts tandem mass spectra into embeddings used to build machine learning (ML) models with fully explainable predictions. It provides an API for transforming raw tandem mass spectral data into embeddings, along with functions for training and validating ML models. Additionally, it includes utilities for retrieving and cleaning training data. ChemEcho is broadly applicable in ML pipelines that use tandem mass spectra for a variety of tasks, such as chemical classification or bioactivity mining. While there are existing methods to generate embeddings from fragmentation data, ChemEcho's approach ensures that predictions remain interpretable, enabling experts to evaluate results and generate hypotheses about the underlying data.

Harwood, Thomas [Lawrence Berkeley National Labora↗
DOE OSTI2020

Multi-Frequency Analysis of Simulated versus Observed Variability in Tropospheric Temperature

Studies seeking to identify a human-caused global warming signal generally rely on climate model estimates of the “noise” of intrinsic natural variability. Assessing the reliability of these noise estimates is of critical importance. We evaluate here the statistical significance of differences between climate model and observational natural variability spectra for global-mean mid- to upper-tropospheric temperature (TMT). We use TMT information from satellites and large multimodel ensembles of forced and unforced simulations. Our main goal is to explore the sensitivity of model-versus-data spectral comparisons to a wide range of subjective decisions. These include the choice of satellite and climate model TMT datasets, the method for separating signal and noise, the frequency range considered, and the statistical model used to represent observed natural variability. Of particular interest is the amplitude of the interdecadal noise against which an anthropogenic tropospheric warming signal must be detected. We find that on time scales of 5–20 years, observed TMT variability is (on average) overestimated by the last two generations of climate models participating in the Coupled Model Intercomparison Project. This result is relatively insensitive to different plausible analyst choices, enhancing confidence in previous claims of detectable anthropogenic warming of the troposphere and indicating that these claims may be conservative. A further key finding is that two commonly used statistical models of short-term and long-term memory have deficiencies in their ability to capture the complex shape of observed TMT spectra.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2021

Chemometrics and Experimental Design for the Quantification of Nitrate Salts in Nitric Acid: Near-Infrared Spectroscopy Absorption Analysis

Implementing remote, real-time spectroscopic monitoring of radiochemical processing streams in hot cell environments requires efficiency and simplicity. The success of optical spectroscopy for the quantification of species in chemical systems highly depends on representative training sets and suitable validation sets. Selecting a training set (i.e., calibration standards) to build multivariate regression models is both time- and resource-consuming using standard one-factor-at-a-time approaches. This study describes the use of experimental design to generate spectral training sets and a validation set for the quantification of sodium nitrate (0–1 M) and nitric acid (0.1–10 M) using the near-infrared water band centered at 1440 nm. Partial least squares regression models were built from training sets generated by both D- and I-optimal experimental designs and a one-factor-at-a-time approach. The prediction performance of each model was evaluated by comparing the bias and standard error of prediction for statistical significance. D- and I-optimal designs reduced the number of samples required to build regression models compared with one-factor-at-a-time while also improving performance. Models must be confirmed against a validation sample set when minimizing the number of samples in the training set. The D-optimal design performed the best when considering both performance and efficiency by improving predictive capability and reducing number of samples in the training set by 64% compared with the one-factor-at-a-time approach. The experimental design approach objectively selects calibration and validation spectral data sets based on statistical criterion to optimize performance and minimize resources.

38 RADIATION CHEMISTRY, RADIOCHEMISTRY, AND NUCLEA↗
DOE OSTI2022

Isotopic Signatures of Lithium Carbonate and Lithium Hydroxide Monohydrate Measured Using Raman Spectroscopy

Lithium isotopic ratios have wide ranging applications as chemical signatures, including improved understanding of geochemical processes and battery development. Measurement of isotope ratios using optical spectroscopies would provide an alternative to traditional mass spectrometric methods, which are expensive and often limited to a chemical laboratory. In this work, Raman spectra of 7 Li 2 CO 3 , 6 Li 2 CO 3 , 7 LiOH*H 2 O and 6 LiOH*H 2 O have been measured to determine the effect of lithium isotope substitution on the Raman molecular vibrations. Thirteen peaks were observed in the spectrum of lithium carbonate, with discernable isotopic shifts occurring in eleven of the thirteen vibrations, two of which have not been previously reported in the literature. The spectrum of lithium hydroxide monohydrate contained nine peaks, with discernable isotopic shifts occurring in eight of the nine vibrations, four of which have not been previously reported in the literature. The Raman spectral data reported here for lithium carbonate and lithium hydroxide monohydrate are in agreement with the previously reported works in the literature, in which the Raman active modes of these molecules were first identified and assigned. However, due to the stability and resolution of the detection system used in this work, isotopic shifts with a magnitude less than one wavenumber have been identified. Principal Component Regression was used to evaluate the sensitivity to isotopic content of small Raman peak shifts in Li 2 CO 3 and indicates differences greater than 2 atom-% could be reliably determined. These measurements add to the body of work on lithium isotope Raman spectroscopy for these two compounds and increases the number of Raman bands which could be used for lithium isotope content analysis.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2024

Saccharomyces cerevisiae CellWall Remodeling in the Absence of Knr4 and Kre6 Revealed by Nano-FourierTransform Infrared Spectroscopy

The cell wall integrity (CWI) signaling pathway regulates yeast cell wall biosynthesis, cell division, and responses to external stress. The cell wall, comprised of a dense network of chitin, β-1,3- and β-1,6- glucans, and mannoproteins, is very thin, <100 nm. Alterations in cell wall composition may activate the CWI pathway. Saccharomyces cerevisiae, a model yeast, was used to study the role of individual wall components in altering the structure and biophysical properties of the yeast cell wall. Near-field Fourier transform infrared spectroscopy (nano-FT-IR) was used for the first direct, spectrochemical identification of cell wall composition in a background (wild-type) strain and two deletion mutants from the yeast knock-out collection: kre6Δ and knr4Δ. Killer toxin resistant 6 (Kre6) is an integral membrane protein required for biosynthesis of β-1,6-glucan, while Knr4 is a cell signaling protein involved in the control of cell wall biosynthesis, in particular, biosynthesis and deposition of chitin. Complementary spectral data were obtained with far-field (FF)-FT-IR, in transmission, and with attenuated total reflectance (ATR) spectromicroscopy with 3 –10 μm wavelength-dependent spatial resolution. The FF-FT-IR spectra of cells and spectra of isolated cell wall components showed that components of the cell body dominated transmission spectra and were still evident in ATR spectra. In contrast, the nano-FT-IR at ~25 nm spatial resolution could be used to characterize the yeast wall chemical structure. Our results show that the β-1,6-glucan content is decreased in kre6Δ, while all glucan content is decreased in the knr4Δ cell wall. The latter may be thinner than in wild type, since not only are mannan and chitin detectable by nano-FT-IR, but also lipid membranes and protein, indicative of cell interior.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2015

Localization of polyhydroxybutyrate in sugarcane using Fourier-transform infrared microspectroscopy and multivariate imaging

Background: Slow-degrading, fossil fuel-derived plastics can have deleterious effects on the environment, especially marine ecosystems. The production of bio-based, biodegradable plastics from or in plants can assist in supplanting those manufactured using fossil fuels. Polyhydroxybutyrate (PHB) is one such biodegradable polyester that has been evaluated as a possible candidate for relinquishing the use of environmentally harmful plastics. Results: PHB, possessing similar properties to polyesters produced from non-renewable sources, has been previously engineered in sugarcane, thereby creating a high-value co-product in addition to the high biomass yield. This manuscript illustrates the coupling of a Fourier-transform infrared microspectrometer, equipped with a focal plane array (FPA) detector, with multivariate imaging to successfully identify and localize PHB aggregates. Principal component analysis imaging facilitated the mining of the abundant quantity of spectral data acquired using the FPA for distinct PHB vibrational modes. PHB was measured in the chloroplasts of mesophyll and bundle sheath cells, acquiescent with previously evaluated plant samples. Conclusion: This study demonstrates the power of IR microspectroscopy to rapidly image plant sections to provide a snapshot of the chemical composition of the cell. While PHB was localized in sugarcane, this method is readily transferable to other value-added co-products in different plants.

36 MATERIALS SCIENCE↗
DOE OSTI2025

Implementation of stacked ensemble machine learning for the detection of surrogate plutonium contamination in soil via LIBS

Supervised machine learning methods have demonstrated increased utility for the quantification of lanthanide and actinide elements in atomic spectroscopy applications. This study implements laser-induced breakdown spectroscopy (LIBS) for the identification of plutonium surrogate material (CeO 2 ) in soil matrices by training supervised machine learning methods on the recorded spectral data. A bagged ensemble using Random Forest yields the highest sensitivity predictions with a detection limit of 0.015 wt.% CeO 2 . However, high precision in Ce content prediction required the use of a stacked ensemble regression, which provided the superlative Ce quantification model with an error of 0.107% and a detection limit of 0.022 wt.%. Furthermore, the high performance of the stacked ensemble demonstrates its potential to enhance the accuracy and sensitivity of nuclear contaminant detection using field-deployable spectroscopic analyzers in real-world scenarios.

47 OTHER INSTRUMENTATION↗
DOE OSTI2020

Dynamic computational optical fringe mitigation in tunable laser absorption spectroscopy

In optical spectroscopic systems where unwanted optical scattering cannot be eliminated, Fabry-Pérot etalons cause unpredictable changes in the spectral background. Frequent system calibration is then required to maintain the desired measurement accuracy, which presents a major limitation to the spectrometer. We introduce a computational approach to mitigate the adverse effects of optical fringing without hardware modifications. Motivated by experimental observations of complicated fringe behaviors, we simplify the problem by decomposing the fringe background into component etalons that can be addressed according to their individual characteristics. The effectiveness of the proposed method is demonstrated on a silicon photonic methane sensor, where accurate measurements of methane concentration are obtained from spectral data strongly affected by optical fringes.

Teng, Chu C. (ORCID:0000000152744835)↗