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An Inversion Analysis of Recent Variability in Natural CO2 Fluxes Using GOSAT and In Situ Observations

About one-half of the global CO2 emissions from fossil fuel combustion and deforestation accumulates in the atmosphere, where it contributes to global warming. The rest is taken up by vegetation and the ocean. The precise contribution of the two sinks, and their location and year-to-year variability are, however, not well understood. We use two different approaches, batch Bayesian synthesis inversion and variational data assimilation, to deduce the global spatiotemporal distributions of CO2 fluxes during 2009-2010. One of our objectives is to assess different sources of uncertainties in inferred fluxes, including uncertainties in prior flux estimates and observations, and differences in inversion techniques. For prior constraints, we utilize fluxes and uncertainties from the CASA-GFED model of the terrestrial biosphere and biomass burning driven by satellite observations and interannually varying meteorology. We also use measurement-based ocean flux estimates and two sets of fixed fossil CO2 emissions. Here, our inversions incorporate column CO2 measurements from the GOSAT satellite (ACOS retrieval, filtered and bias-corrected) and in situ observations (individual flask and afternoon-average continuous observations) to estimate fluxes in 108 regions over 8-day intervals for the batch inversion and at 3 x 3.75 weekly for the variational system. Relationships between fluxes and atmospheric concentrations are derived consistently for the two inversion systems using the PCTM atmospheric transport model driven by meteorology from the MERRA reanalysis. We compare the posterior fluxes and uncertainties derived using different data sets and the two inversion approaches, and evaluate the posterior atmospheric concentrations against independent data including aircraft measurements. The optimized fluxes generally resemble those from other studies. For example, the results indicate that the terrestrial biosphere is a net CO2 sink, and a GOSAT-only inversion suggests a shift in the global sink from the tropics south to the north relative to the prior and to an in-situ-only inversion. We also find a smaller terrestrial sink in higher-latitude northern regions in boreal summer of 2010 relative to 2009.

Carbon dioxide↗

Overestimated natural biological nitrogen fixation translates to an exaggerated CO 2 fertilization effect in Earth system models

CO 2 fertilization of the terrestrial biosphere is limited by nitrogen. Biological nitrogen fixation (BNF) is the dominant natural nitrogen source to the terrestrial biosphere and can alleviate nitrogen limitation but is poorly constrained in Earth system models (ESMs). Here, in this study, we compare terrestrial BNF from an ensemble of ESMs of the 6th Coupled Model Intercomparison Project to a new global synthesis of observations across natural and agricultural biomes. We find that compared to observations, ESMs underestimate agricultural BNF but overestimate natural BNF in the present day by over 50%. Natural BNF is overestimated in the most productive ecosystems that contribute most to the terrestrial carbon sink (forests and grasslands). ESMs with different BNF representations yield a range of BNF responses to CO 2 enrichment. Some ESMs with phenomenological representations of BNF predict a natural BNF increase in response to a doubling of CO 2 that aligns with a meta-analysis of CO 2 enrichment experiments (31% increase) but fail to account for the substantial carbon cost of BNF. In contrast, ESMs with mechanistic representations of BNF account for its carbon cost as well as its regulation by nitrogen limitation but overestimate the BNF response to a doubling of CO 2 (135% increase). Overall, all current BNF representations in ESMs fall short of fully capturing its response to rising atmospheric CO 2 . Finally, we find a positive correlation between modeled present-day natural BNF and the CO 2 fertilization effect across ESMs, suggesting that overestimated natural BNF translates to an exaggerated CO 2 fertilization effect of approximately 11% in ESMs.

Biological nitrogen fixation↗

Predicting the earth's future

The development of earth system models that will simulate the past and present and provide predictions of future conditions is essential now that human activities have the potential to induce changes in the planetary environment. Critical aspects of global change include its pervasiveness and ubiquity, its distribution in several distinct time-scale bands, and the interactions between the atmosphere, ocean, land surface, and the terrestrial and marine biospheres. A model of the earth system on the scale of decades to centuries, developed by the Earth System Science Committee (NASA) with the strategy of dividing by time scale rather than discipline, is presented and the requirements for observations to support the implementation of the model are reviewed.

Dutton, J. A.↗

Vegetation biogeography is a main source of uncertainty in modelling the land carbon cycle

The terrestrial biosphere exchanges a large amount of CO 2 with the atmosphere through photosynthesis and respiration, determining the magnitude of land carbon sink and consequently influencing the rate of global warming. The magnitudes of global photosynthesis and respiration, however, vary widely across models (100-200 PgC/year), constituting a key and persistent source of uncertainty in carbon cycle and climate modelling. Here, we argue that the uncertainty in the land carbon cycle modelling is largely attributable to the uncertainty in biogeography – the distribution of plant functional types (PFTs). Using an ensemble of dynamic global vegetation models (DGVMs), we find a strong dependence of total photosynthesis on total area for each PFT. The dependence allows us to reduce the spread of land carbon cycle estimates by ~75% using remote sensing-based PFT maps. We further find that 56 ± 21% of climate-driven changes in global photosynthesis modelled by DGVMs are caused by changes in PFT distribution in the last two decades. Our study identifies vegetation biogeography as a main controlling factor of uncertainty in land carbon cycle modelling and highlights the importance of biogeography-climate interactions in carbon cycle and climate studies.

Zhao, Ruiying [National Univ. of Singapore (Singap↗

gdess: A framework for evaluating simulated atmospheric CO 2 in Earth System Models

Atmospheric carbon dioxide (CO 2 ) plays a key role in the global carbon cycle and global warming. Climate-carbon feedbacks are often studied and estimated using Earth System Models (ESMs), which couple together multiple model components—including the atmosphere, ocean, terrestrial biosphere, and cryosphere—to jointly simulate mass and energy exchanges within and between these components. Despite tremendous advances, model intercomparisons and benchmarking are aspects of ESMs that warrant further improvement (Fer et al., 2021; Smith et al., 2014). Such benchmarking is critical because comparing the value of state variables in these simulations against observed values provides evidence for appropriately refining model components; moreover, researchers can learn much about Earth system dynamics in the process (Randall et al., 2019). We introduce `gdess` (a.k.a., Greenhouse gas Diagnostics for Earth System Simulations), which parses observational datasets and ESM simulation output, combines them to be in a consistent structure, computes statistical metrics, and generates diagnostic visualizations. In its current incarnation, `gdess` facilitates evaluating a model's ability to reproduce observed temporal and spatial variations of atmospheric CO 2 . The diagnostics implemented modularly in `gdess` support more rapid assessment and improvement of model-simulated global CO 2 sources and sinks associated with land and ocean ecosystem processes. We intend for this set of automated diagnostics to form an extensible, open source framework for future comparisons of simulated and observed concentrations of various greenhouse gases across Earth system models.

97 MATHEMATICS AND COMPUTING↗

Estimating the seasonal carbon source-sink geography of a natural, steady-state terrestrial biosphere

The estimation of the seasonal dynamics of biospheric-carbon sources and sinks to be used as an input to global atmospheric CO2 studies and models is discussed. An ecological biosphere model is given and the advantages of the model are examined. Monthly maps of estimated biospheric carbon source and sink regions and estimates of total carbon fluxes are presented for an equilibrium terrestrial biosphere. The results are compared with those from other models. It is suggested that, despite maximum variations of atmospheric CO2 in boreal latitudes, the enormous contributions of tropical wet-dry regions to global atmospheric CO2 seasonality can not be ignored.

Box, Elgene O.↗

Embracing fine-root system complexity in terrestrial ecosystem modeling

Projecting the dynamics and functioning of the biosphere requires a holistic consideration of whole-ecosystem processes. However, biases toward leaf, canopy, and soil modeling since the 1970s have constantly left fine-root systems being rudimentarily treated. As accelerated empirical advances in the last two decades establish clearly functional differentiation conferred by the hierarchical structure of fine-root orders and associations with mycorrhizal fungi, a need emerges to embrace this complexity to bridge the data-model gap in still extremely uncertain models. In this work, we propose a three-pool structure comprising transport and absorptive fine roots with mycorrhizal fungi (TAM) to model vertically resolved fine-root systems across organizational and spatial–temporal scales. Emerging from a conceptual shift away from arbitrary homogenization, TAM builds upon theoretical and empirical foundations as an effective and efficient approximation that balances realism and simplicity. A proof-of-concept demonstration of TAM in a big-leaf model both conservatively and radically shows robust impacts of differentiation within fine-root systems on simulating carbon cycling in temperate forests. Theoretical and quantitative support warrants exploiting its rich potentials across ecosystems and models to confront uncertainties and challenges for a predictive understanding of the biosphere. Echoing a broad trend of embracing ecological complexity in integrative ecosystem modeling, TAM may offer a consistent framework where modelers and empiricists can work together toward this grand goal.

59 BASIC BIOLOGICAL SCIENCES↗

Combining Observations and Models: A Review of the CARDAMOM Framework for Data‐Constrained Terrestrial Ecosystem Modeling

The rapid increase in the volume and variety of terrestrial biosphere observations (i.e., remote sensing data and in situ measurements) offers a unique opportunity to derive ecological insights, refine process‐based models, and improve forecasting for decision support. However, despite their potential, ecological observations have primarily been used to benchmark process‐based models, as many past and current models lack the capability to directly integrate observations and their associated uncertainties for parameterization. In contrast, data assimilation frameworks such as the CARbon DAta MOdel fraMework (CARDAMOM) and its suite of process‐based models, known as the Data Assimilation Linked Ecosystem Carbon Model (DALEC), are specifically designed for model‐data fusion. This review, motivated by a recent CARDAMOM community workshop, examines the development and applications of CARDAMOM, with an emphasis on its role in advancing ecosystem process understanding. CARDAMOM employs a Bayesian approach, using a Markov Chain Monte Carlo algorithm to enable data‐driven calibration of DALEC parameters and initial states (i.e., carbon pool sizes) through observation operators. CARDAMOM's unique ability to retrieve localized model process parameters from diverse datasets—ranging from in situ measurements to global satellite observations—makes it a highly flexible tool for analyzing spatially variable ecosystem responses to environmental change. However, assimilating these data also presents challenges, including data quality issues that propagate into model skill, as well as trade‐offs between model complexity, parameter equifinality, and predictive performance. We discuss potential solutions to these challenges, such as reducing parameter equifinality by incorporating new observations. This review also offers community recommendations for incorporating emerging datasets, integrating machine learning techniques, strengthening collaboration with remote sensing, field, and modeling communities, and expanding CARDAMOM's relevance for localized ecosystem monitoring and decision‐making. CARDAMOM enables a deep, mechanistic understanding of terrestrial ecosystem dynamics that cannot be achieved through empirical analyses of observational datasets or weakly constrained models alone.

Bayesian inference↗

B33C-0612: Evaluation of Simulated Biospheric Carbon Dioxide Fluxes and Atmospheric Concentrations Using Global in Situ Observations

Atmospheric mixing ratios of carbon dioxide (CO2) are largely controlled by anthropogenic emission sources and biospheric sources/sinks. Global biospheric fluxes of CO2 are controlled by complex processes facilitating the exchange of carbon between terrestrial ecosystems and the atmosphere. These processes which play a key role in these terrestrial ecosystem-atmosphere carbon exchanges are currently not fully understood, resulting in large uncertainties in the quantification of biospheric CO2 fluxes. Current models with these inherent deficiencies have difficulties simulating the global carbon cycle with high accuracy. We are developing a new modeling platform, GEOS-Chem-CASA by integrating the year-specific NASA-CASA (National Aeronautics and Space Administration - Carnegie Ames Stanford Approach) biosphere model with the GEOS-Chem (Goddard Earth Observation System-Chemistry) chemical transport model to improve the simulation of atmosphere-terrestrial ecosystem carbon exchange. We use NASA-CASA to explicitly represent the exchange of CO2 between terrestrial ecosystem and atmosphere by replacing the baseline GEOS-Chem land net CO2 flux and forest biomass burning CO2 emissions. We will present the estimation and evaluation of these "bottom-up" land CO2 fluxes, simulated atmospheric mixing ratios, and forest disturbance changes over the last decade. In addition, we will present our initial comparison of atmospheric column-mean dry air mole fraction of CO2 predicted by the model and those retrieved from NASA's OCO-2 (Orbiting Carbon Observatory-2) satellite instrument and model-predicted surface CO2 mixing ratios with global in situ observations. This evaluation is the first step necessary for our future work planned to constrain the estimates of biospheric carbon fluxes through "top-down" inverse modeling, which will improve our understanding of the processes controlling atmosphere-terrestrial ecosystem greenhouse gas exchanges, especially over regions which lack in situ observations.

in situ observations↗

Toward Integrated Seasonal Predictions of Land and Ocean Carbon Flux: Lessons from the 2015-16 El Nino

Seasonal forecasts made by coupled atmosphere-ocean general circulation models (GCMs) are increasingly able to provide skillful forecasts of climate anomalies. At some centers, the capabilities of these models are being expanded to represent carbon-climate feedbacks including ocean biogeochemistry (OB), terrestrial biosphere (TB) interactions, and fires. These advances raise the question of whether such models can support skillful forecasts of carbon fluxes.Here, we examine whether land and ocean carbon flux anomalies associated with the 2015-16 El Nino could have been predicted months in advance. This El Nino was noteworthy for the magnitude of the ocean temperature perturbation, the skill with which this perturbation was predicted, and the extensive satellite observations that can be used to track its impact. We explore this topic using NASA's Goddard Earth Observing System (GEOS) model, which routinely produces an ensemble of seasonal climate forecasts, and a suite of offline dynamical and statistical models that estimate carbon flux processes. Using GEOS forecast fields from 2015-16 to force flux model hindcasts shows that these models are able to reproduce significant features observed by satellites. Specifically, OB hindcasts are able to predict anomalies in chlorophyll distributions with lead times of 3-4 months. The ability of TB hindcasts to reproduce NDVI anomalies is driven by the skill of the climate forecast, which is greatest at short lead times over tropical landmasses. Statistical fire forecasts driven by ocean climate indices are able to predict burned area in the tropics with lead times of 3-12 months. We also integrate the ocean and land hindcast fluxes into the GEOS GCM to examine the magnitude of the atmospheric carbon dioxide anomaly and compare with satellite and ground-based observations.While seasonal forecasting remains an active area of research, these results demonstrate that forecasts of carbon flux processes can support a variety of applications, potentially allowing scientists to understand carbon-climate feedbacks as they happen and to capitalize on more flexible satellite technologies that allow areas of interest to be targeted with lead times of weeks to months. We also provide a first glimpse at the spring 2019 carbon forecast using the GEOS-based forecasting system.

Ott, L.↗

Interactive Biogenic Emissions and Drought Stress Effects on Atmospheric Composition in NASA GISS ModelE

Drought is a hydroclimatic extreme that causes perturbations to the terrestrial biosphere and acts as a stressor on vegetation, affecting emissions patterns. During severe drought, isoprene emissions are reduced. In this paper, we focus on capturing this reduction signal by implementing a new percentile isoprene drought stress (y d ) algorithm in NASA GISS ModelE based on the MEGAN3 (Model of Emissions of Gases and Aerosols from Nature Version 3) approach as a function of a photosynthetic parameter (V c,max ) and water stress (β). Four global transient simulations from 2003–2013 are used to demonstrate the effect without y d (Default_ModelE) and with online y d (DroughtStress_ModelE). DroughtStress_ModelE is evaluated against the observed isoprene measurements at the Missouri Ozarks AmeriFlux (MOFLUX) site during the 2012 severe drought where improvements in the correlation coefficient indicate it is a suitable drought stress parameterization to capture the reduction signal during severe drought. The application of y d globally leads to a decadal average reduction of ∼ 2.7 %, which is equivalent to ∼14.6 Tg yr -1 of isoprene. The changes have larger impacts in regions such as the southeastern US. DroughtStress_ModelE is validated using the satellite ΩHCHO column from the Ozone Monitoring Instrument (OMI) and surface O 3 observations across regions of the US to examine the effect of drought on atmospheric composition. It was found that the inclusion of isoprene drought stress reduced the overestimation of ΩHCHO in Default_ModelE during the 2007 and 2011 southeastern US droughts and led to improvements in simulated O 3 during drought periods. We conclude that isoprene drought stress should be tuned on a model-by-model basis because the variables used in the parameterization responses are relative to the land surface model hydrology scheme (LSM) and the effects of y d application could be larger than seen here due to ModelE not having large biases of isoprene during severe drought.

drought stress effects↗

Simulated Land Allocation, Nitrogen Use, and Nitrogen Loss in the Mississippi Atchafalaya River Basin for Various RFS2 (Renewable Fuel Standard) Policy Scenarios

Total nitrogen leaching rates were calculated over the Mississippi Atchafalaya River Basin (MARB) using an integrated economic-biophysical modeling approach. Land allocation for corn production and total nitrogen application rates were calculated for crop reporting districts using the Biofuel and Environmental Policy Analysis Model (BEPAM) for 5 RFS2 policy scenarios. These were used as input in the Integrated BIosphere Simulator-Agricultural Version (Agro-IBIS) and the Terrestrial Hydrologic Model with Biogeochemistry (THMB) to calculate the nitrogen loss. Land allocation and total nitrogen application simulations were simulated for the period 2016-2030 for 303 crop reporting districts (https://www.nass.usda.gov/Data_and_Statistics/County_Data_Files/Frequently_Asked_Questions/county_list.txt). The final 2030 values are reported here. Both are stored in csv files. Units for land allocation are million ha and nitrogen application are million kg. The nitrogen leaching rates were modeled with a spatial resolution of 5' x 5' using the North American Datum of 1983 projection and stored in NetCDF files. The 30-year average is calculated over the last 30 years of the 45 years being simulated. Leaching rates are calculated in kg-N/ha.

bioenergy crops↗

Quantifying the Observability of CO2 Flux Uncertainty in Atmospheric CO2 Records Using Products from Nasa's Carbon Monitoring Flux Pilot Project

NASAs Carbon Monitoring System (CMS) Flux Pilot Project (FPP) was designed to better understand contemporary carbon fluxes by bringing together state-of-the art models with remote sensing datasets. Here we report on simulations using NASAs Goddard Earth Observing System Model, version 5 (GEOS-5) which was used to evaluate the consistency of two different sets of observationally constrained land and ocean fluxes with atmospheric CO2 records. Despite the strong data constraint, the average difference in annual terrestrial biosphere flux between the two land (NASA Ames CASA and CASA-GFED) models is 1.7 Pg C for 2009-2010. Ocean models (NOBM and ECCO2-Darwin) differ by 35 in their global estimates of carbon flux with particularly strong disagreement in high latitudes. Based upon combinations of terrestrial and ocean fluxes, GEOS-5 reasonably simulated the seasonal cycle observed at northern hemisphere surface sites and by the Greenhouse gases Observing SATellite (GOSAT) while the model struggled to simulate the seasonal cycle at southern hemisphere surface locations. Though GEOS-5 was able to reasonably reproduce the patterns of XCO2 observed by GOSAT, it struggled to reproduce these aspects of AIRS observations. Despite large differences between land and ocean flux estimates, resulting differences in atmospheric mixing ratio were small, typically less than 5 ppmv at the surface and 3 ppmv in the XCO2 column. A statistical analysis based on the variability of observations shows that flux differences of these magnitudes are difficult to distinguish from natural variability, regardless of measurement platform.

FPP↗

OCO-2 Satellite-imposed Constraints on Terrestrial Biospheric CO2 Flux over South Asia

The spatiotemporal variability of terrestrial biospheric carbon dioxide (CO2) flux over South Asia is poorly understood. The inverse model “top-down” CO2 flux estimates which rely on atmospheric CO2 observational data are impeded by sparse in situ measurements over this region. The Orbiting Carbon Observatory 2 (OCO-2) provides much needed global retrievals of column-average CO2 dry-air mole fraction (XCO2) with the finest spatial and temporal resolution and highest sensitivity to surface fluxes available to-date. This study conducted global inverse model simulations as part of the second OCO-2 Multi-model Intercomparison Project assimilating version 9 of the OCO-2 XCO2 retrievals in land nadir (LN) and land glint (LG) observing modes and global in situ (IS) measurements. The four-dimensional variational assimilation system with the GEOS-Chem global chemical transport model was used to estimate CO2 fluxes from 2015 to 2018. We then assessed the spatiotemporal variability of optimized CO2 Net ecosystem Exchange (NEE) fluxes aggregated over the South Asia region. The most robust result found by assimilating OCO-2 observations was the constraints imposed on the seasonal cycle of terrestrial biospheric fluxes over South Asia. The seasonality of South Asian NEE estimated by assimilating OCO-2 or global IS data showed a larger seasonal cycle compared to the current understanding of NEE in this region (represented by the prior NEE used in the model). The satellite-in situ joint inversion (IS + LN + LG) led to land flux seasonal amplitude (absolute magnitude of the difference between peak and trough of monthly mean values over a year) of 4.0 PgC yr-1, compared to the prior model (1.5 PgC yr-1). Moreover, OCO-2 data imposed a phase shift in the seasonal cycle, resulting in a large CO2 source in April and a large uptake in September. Most of the features in the seasonal cycle imposed by OCO-2 data are in agreement with previous “top-down” studies assimilating regional aircraft observations. Nevertheless, we recommend a closer examination of the novel features highlighted by the OCO-2 column data over South Asia in future studies by conducting regional inverse modelling with denser in situ and vertically-resolved regional observations along with satellite data.

OCO-2↗

Application of AVHRR vegetation index to study atmosphere-biosphere exchange of CO2: Results from a 3-D tracer transport model

The 'normalized difference vegetation indices' (NVI) derived from AVHRR radiances are combined with field data of soil respiration and a global map of net primary productivity to prescribe, for the globe, the seasonal exchange of CO2 between the atmosphere and the terrestrial biosphere. The monthly fluxes of CO2 thus obtained are used as inputs to a 3-D tracer transport model which uses winds generated by a 3-D atmospheric general circulation model to advect CO2 as an inert constituent. Analysis of the 3-D model results shows reasonable agreement between the simulated and observed annual cycles of atmospheric CO2 at the locations of the remote monitoring stations. The application is shown of atmospheric CO2 distributions to calibrate the NVI in terms of carbon fluxes. The approach suggests that the NVI may be used to provide quantitative information about long term and global scale variations of photosynthetic activity and of atmospheric CO2 concentrations provided that variations in the atmospheric circulation and in atmospheric composition are known.

Fung, Inez Y.↗

A model of the CO2 exchanges between biosphere and atmosphere in the tundra

A physical model of the soil thermal regime in a permafrost terrain has been developed and validated with soil temperature measurements at Barrow, Alaska. The model calculates daily soil temperatures as a function of depth and average moisture contents of the organic and mineral layers using a set of five climatic variables, i.e., air temperature, precipitation, cloudiness, wind speed, and relative humidity. The model is not only designed to study the impact of climate change on the soil temperature and moisture regime, but also to provide the input to a decomposition and net primary production model. In this context, it is well known that CO2 exchanges between the terrestrial biosphere and the atmosphere are driven by soil temperature through decomposition of soil organic matter and root respiration. However, in tundra ecosystems, net CO2 exchange is extremely sensitive to soil moisture content; therefore it is necessary to predict variations in soil moisture in order to assess the impact of climate change on carbon fluxes. To this end, the present model includes the representation of the soil moisture response to changes in climatic conditions. The results presented in the foregoing demonstrate that large errors in soil temperature and permafrost depth estimates arise from neglecting the dependence of the soil thermal regime on soil moisture contents. Permafrost terrain is an example of a situation where soil moisture and temperature are particularly interrelated: drainage conditions improve when the depth of the permafrost increases; a decrease in soil moisture content leads to a decrease in the latent heat required for the phase transition so that the heat penetrates faster and deeper, and the maximum depth of thaw increases; and as excepted, soil thermal coefficients increase with moisture.

Labgaa, Rachid R.↗