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DOE OSTI2026

Full ribosomal operon sequencing of anaerobic gut fungi (phylum Neocallimastigomycota ): insights on its markers and phylogenetic resolution

The phylogenetic affiliations of anaerobic gut fungi (Neocallimastigomycota) are typically evaluated using single-gene markers. However, this approach often fails to resolve relationships between closely related lineages. To address this issue and identify alternative markers, we created a curated database comprising the complete ribosomal operon sequences of 156 isolates, representing 20 of the 22 recognized genera and two new genus-level clades. Using long-read sequencing, we obtained ~9 kbp operon sequences and developed a robust analysis pipeline. Incorporating both coding genes and non-coding regions (excluding IGS1) improved phylogenetic resolution. This phylogenetic approach successfully resolved the Cyllamyces and Caecomyces clades (hard-to-distinguish genetically), as well as seven analysed Piromyces species. We also scanned the operon for markers that are suitable for short-read sequencing platforms, with the aim of enhancing biodiversity and phylogenetic studies. Notably, the ETS1 genetic region also enabled the distinction between these lineages, indicating its phylogenetic value within the ribosomal operon. The resulting database is a valuable resource for expanding and strengthening phylogenetic frameworks.

High-throughput sequencing↗

DOE OSTI2026

VirJenDB: a FAIR (meta)data and bioinformatics platform for all viruses

High-throughput sequencing has generated an unprecedented volume of data. However, researcher-submitted data in repositories requires extensive curation and quality control for reuse. These tasks are hindered by the multiplicity of repositories, the sheer volume of the data, and the complexity of virus (meta)data curation. To address these challenges, VirJenDB offers a user-friendly platform to facilitate versioned, community-driven curation, and ontology development. Virus sequences were ingested from 16 sources, including ~200 fields of metadata or standards, covering taxonomy, sample, and host information. Up to 85 metadata fields have undergone at least one round of curation, and are linked to 15.4 million virus sequences, with 88 % from those infecting eukaryotes and the remaining infecting prokaryotes. Subsets were created, including a novel collection of 0.91 million viral operational taxonomic unit (vOTU) sequences across all viruses, while keeping the original sequences from each vOTU to facilitate downstream analyses, e.g. sequence variation. The VirJenDB web portal (https://www.virjendb.org) provides HTTPS and Application Programming Interface (API) access to the sequence datasets and metadata, offering a search engine, filtering, download, visualizations, and documentation. VirJenDB aims to connect the phage and eukaryotic virus research communities by supporting webtool integration, meta-analyses, and metadata schema extensions.

Saghaei, Shahram↗

NASA NTRS1979

Development of pulsed processes for the manufacture of solar cells

Low-energy ion implantation processes for the automated production of silicon solar cells were investigated. Phosphorus ions at an energy of 10 keV and dose of 2 x 10 to the 15th power/sq cm were implanted in silicon solar cells to produce junctions, while boron ions at 25 keV and 5 x 10 to the 15th power were implanted in the cells to produce effective back surface fields. An ion implantation facility with a beam current up to 4 mA and a production throughput of 300 wafers per hour was designed and installed. A design was prepared for a 100 mA, automated implanter with a production capacity of 100 MW sub e/sq cm per year. Two process sequences were developed which employ ion implantation and furnace or pulse annealing. A computer program was used to determine costs for junction formation by ion implantation and various furnace annealing cycles to demonstrate cost effectiveness of these methods.

Minnucci, J. A.↗

NASA NTRS2014

Preparing for Dawn's Mission at Ceres: Challenges and Opportunities in the Exploration of a Dwarf Planet

After escaping from Vesta in 2012, Dawn is continuing its 2.5-year flight to dwarf planet Ceres. Investigating this second destination promises to provide a view of an intriguing world of ice and rock, likely displaying fascinating geology entirely unlike any body yet orbited by a spacecraft. Dawn spends the significant majority of the time thrusting with its ion propulsion system to deliver the 3.6 km/s required to rendezvous with Ceres. Meanwhile, the operations team has developed the sequences that will be used there. Following orbit capture in March 2015, Dawn will fly to a series of four circular polar science orbits. The orbits, ranging from about 13,500 km to 375 km in altitude, are designed to optimize the scientific observations. The overall strategy for exploring Ceres is based strongly on the extremely successful 16 months of Vesta operations, during which Dawn met or exceeded all of its objectives. Nevertheless, the loss of two of the spacecraft's four reaction wheels has necessitated some important changes. Based on a very productive hydrazine conservation campaign in the interplanetary cruise and the development of new hydrazine-efficient methods of operating at Ceres, there is good reason to expect that Dawn will be able to accomplish all of its objectives regardless of the health of the reaction wheels. This paper describes the progress in traveling to Ceres as well as the plans for exploring this giant, icy world.

Vesta↗

DOE OSTI2026

Overview of IMPACT Data Acquisition System and Data Reduction Process

This report documents the development of the data acquisition system (DAS) and data reduction methodologies for the Irradiated Material Property Accelerated Characterization Test (IMPACT) experiment at the Advanced Test Reactor (ATR). The IMPACT experiment is designed to enable in-pile measurement of thermal conductivity in metallic nuclear fuels, specifically U-10Zr, using an instrumented thermal conductivity probe. The DAS supports both passive temperature monitoring and active thermal interrogation of the probe through controlled AC and DC excitation. Significant modifications to laboratory-scale systems were required to accommodate the higher resistance paths associated with the in-pile application. Custom electronics and relay-controlled measurement sequencing were developed to enable the measurement and sufficient power delivery to the sensing region. A reduced-order, axisymmetric thermal model based on the thermal quadrupoles method is presented to support data interpretation. This model enables efficient evaluation of transient heat transfer behavior and facilitates solution of the inverse problem required to extract thermal properties from measured signals. Multiple boundary condition formulations are discussed to address varying experimental time scales and geometries. Additionally, machine learning techniques are introduced to support data reduction and improve confidence in inverse solutions. Convolutional neural networks are applied to identify the presence of gas gaps and other evolving geometric features that significantly impact thermal response during irradiation. These efforts contribute to the broader integration of digital twin frameworks and real-time modeling capabilities within the Advanced Fuels Campaign.

46 - INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AN↗

NASA NTRS1998

Segmentation and tracking in echocardiographic sequences: active contours guided by optical flow estimates

This paper presents a method for segmentation and tracking of cardiac structures in ultrasound image sequences. The developed algorithm is based on the active contour framework. This approach requires initial placement of the contour close to the desired position in the image, usually an object outline. Best contour shape and position are then calculated, assuming that at this configuration a global energy function, associated with a contour, attains its minimum. Active contours can be used for tracking by selecting a solution from a previous frame as an initial position in a present frame. Such an approach, however, fails for large displacements of the object of interest. This paper presents a technique that incorporates the information on pixel velocities (optical flow) into the estimate of initial contour to enable tracking of fast-moving objects. The algorithm was tested on several ultrasound image sequences, each covering one complete cardiac cycle. The contour successfully tracked boundaries of mitral valve leaflets, aortic root and endocardial borders of the left ventricle. The algorithm-generated outlines were compared against manual tracings by expert physicians. The automated method resulted in contours that were within the boundaries of intraobserver variability.

Non-NASA Center↗

NASA NTRS2004

Economic Impact of Water Allocation on Agriculture in the Lower Chattahoochee River Basin

The relative value of irrigation water was assessed for three important crops (corn, cotton, and peanuts) grown in the southeastern United States. A decision tool was developed with the objective of allocating limited available water among competing crops in a manner that would maximize the economic returns to the producers. The methodology was developed and tested for a hypothetical farm located in Henry County, Alabama in the Chattahoochee river basin. Crop yield - soil moisture response functions were developed using Monte Carlo simulated data for cotton, corn, and peanuts. A hydrologic model was employed to simulate runoff over the period of observed rainfall the county to provide inflows to storage facilities that could be used as constraints for the optimal allocation of the available water in the face of the uncertainty of future rainfall and runoff. Irrigation decisions were made on a weekly basis during the critical water deficit period in the region. An economic optimization model was employed with the crop responses, and soil moisture functions to determine the optimum amount of water place on each crop subject to the amount of irrigation water availability and climatic uncertainty. The results indicated even small amounts of irrigation could significantly benefit farmers in the region if applied judiciously. A weekly irrigation sequence was developed that maintained the available water on the crops that exhibited the most significant combination of water sensitivity and cash value.

Limaye, Ashutosh S.↗

NASA NTRS1972

Evaluation of tantalum 316 stainless steel transition joints

Tubular transition joints providing a metallurgically bonded connection between tantalum and 316 stainless steel pipe sections were comparatively evaluated for durability under thermal cycling conditions approximating the operation of a SNAP-8 mercury boiler. Both coextruded and vacuum brazed transition joints of 50mm (2 inch) diameter were tested by thermal cycling 100 times between 730 C and 120 C(1350 F and 250 F) in a high vacuum environment. The twelve evaluated transition joints survived the full test sequence without developing leaks, although liquid penetrant bond line indications eventually developed in all specimens. The brazed transition joints exhibited the best dimensional stability and bond line durability.

Stoner, D. R.↗

NASA NTRS1975

On the Laplace transform for distributions

A new characterization of the Laplace transform for Schwartz distributions is developed, using sequences of linear transformations on the space of distributions. The standard theorems on analyticity, uniqueness and invertibility of the transform are proved, using the new characterization as the definition of the Laplace transform. It is shown that this sequential definition is equivalent to Schwartz's extension of the ordinary Laplace transform to distributions which he obtained from the Fourier transform.

Price, D. B.↗

NASA NTRS1978

Preliminary definition and evaluation of advanced space concepts. Volume 1: Executive summary

A study was made to develop the characteristics, cost, and performance of a few of the more attractive application concepts, and to compare them against leading terrestrial alternatives, in order to determine their potential, identify those deserving further NASA attention and possible inclusion into the formal development planning sequence, and serve to initiate a dialogue with the using community and agencies.

Bekey, I.↗

NASA NTRS1978

Structural evolution of Arsia Mons, Pavonis Mons, and Ascreus Mons Tharsis region of Mars

Analysis of Viking Orbiter data suggests that Arsia Mons, Pavonis Mons, and Ascreus Mons, three large shield volcanoes of the Tharsis volcanoes of Mars, have had similar evolutionary trends. Arsia Mons appears to have developed in the following sequence: (1) construction of a main shield volcano, (2) outbreak of parasitic eruption centers on the northeast and southwest flanks, (3) volcano-tectonic subsidence of the summit and formation of concentric fractures and grabens, possibly by evacuation of an underlying magma chamber during eruption of copious lavas from parasitic eruption centers on the northeast and southwest flanks, and (4) continued volcanism along a fissure or rift bisecting the main shield, resulting in flooding of the floor of the volcano-tectonic depression and inundation of the northeast and southwest flanks by voluminous lavas locally forming parasitic shields. In terms of this sequence Pavonis Mons has developed to stage (3) and Ascreus Mons has evolved to stage (2). This interpretation is supported by crater frequency-diameter distributions in the 0.1- to 3.0-km diameter range.

Crumpler, L. S.↗

NASA NTRS1981

Theory, computation, and application of exponential splines

A generalization of the semiclassical cubic spline known in the literature as the exponential spline is discussed. In actuality, the exponential spline represents a continuum of interpolants ranging from the cubic spline to the linear spline. A particular member of this family is uniquely specified by the choice of certain tension parameters. The theoretical underpinnings of the exponential spline are outlined. This development roughly parallels the existing theory for cubic splines. The primary extension lies in the ability of the exponential spline to preserve convexity and monotonicity present in the data. Next, the numerical computation of the exponential spline is discussed. A variety of numerical devices are employed to produce a stable and robust algorithm. An algorithm for the selection of tension parameters that will produce a shape preserving approximant is developed. A sequence of selected curve-fitting examples are presented which clearly demonstrate the advantages of exponential splines over cubic splines.

Mccartin, B. J.↗

NASA NTRS1984

Modular design attitude control system

The problem of applying modular attitude control to a rigid body-flexible suspension model of a flexible spacecraft with some state variables inaccessible was addressed by developing a sequence of single axis models and generating a series of reduced state linear observers of minimum order to reconstruct those scalar state variables that were inaccessible. The specific single axis models treated consisted of two, three and four rigid bodies, respectively, interconnected by a flexible shaft passing through the mass centers of the bodies. Reduced state linear observers of all orders up to one less than the total number of scalar state variables were generated for each of the three single axis models cited.

Chichester, F. D.↗

NASA NTRS1983

Modular design attitude control system

The problem of applying modular attitude control to a rigid body - flexible suspension model of a flexible spacecraft with some state variables inaccessible was addressed by developing a sequence of single axis models and generating a series of reduced state linear observers of minimum order to reconstruct those scalar variables that were inaccessible. The specific single axis models treated consisted of two, three and four rigid bodies, respectively, interconnected by a flexible shaft passing through the mass centers of the bodies. Reduced state linear observers of all orders up to one less than the total number of scalar state variables were generated for each of the three single axis models cited.

Chichester, F. D.↗

NASA NTRS1986

Molecular hydrogen in the young starburst in NGC 253

Shocked molecular hydrogen has been observed around the nucleus of the nearby galaxy, NGC 253. This galaxy has a relatively modest luminosity (approx. 3 x 10 to the 10th power solar luminosities) and appears to have no distortions or companions that would indicate a possible interaction. The energy of the galaxy appears to be derived primarily from a starburst. Thus, our observations have caused us to examine the starburst process in some detail to identify how the molecular hydrogen is excited. It is proposed that the molecular hydrogen emission is produced by collisions of dense molecular clouds accelerated by supernovae explosions. Within the nucleus, this process occurs early in the life of the starbust. This suggest a sequence of nuclear starburst development; examples along this sequence from young to old would include NGC 253, M82, NGC 1097, and M31.

Rieke, G. H.↗

NASA NTRS1985

ENCOMPASS: A SAGA based environment for the compositon of programs and specifications, appendix A

ENCOMPASS is an example integrated software engineering environment being constructed by the SAGA project. ENCOMPASS supports the specification, design, construction and maintenance of efficient, validated, and verified programs in a modular programming language. The life cycle paradigm, schema of software configurations, and hierarchical library structure used by ENCOMPASS is presented. In ENCOMPASS, the software life cycle is viewed as a sequence of developments, each of which reuses components from the previous ones. Each development proceeds through the phases planning, requirements definition, validation, design, implementation, and system integration. The components in a software system are modeled as entities which have relationships between them. An entity may have different versions and different views of the same project are allowed. The simple entities supported by ENCOMPASS may be combined into modules which may be collected into projects. ENCOMPASS supports multiple programmers and projects using a hierarchical library system containing a workspace for each programmer; a project library for each project, and a global library common to all projects.

Terwilliger, Robert B.↗

NASA NTRS1988

Infrared spectroscopy of radio-luminous OH/IR stars

Low-resolution 1.5-2.5-micron spectra for 21 radio-luminous OH/IR stars are presented. These spectra divide into two broad classes. Those with very strong water-vapor absorption closely resemble the spectra of classical Mira variables and are classified Type VM. Those with weaker water-vapor absorption, but still showing strong CO absorption, resemble the spectra of true core-burning supergiants and are classified Type SG. Comparison of the classification of 30 radio-luminous OH/IR stars with their Delta(V)s and luminosities suggests this classification is a good indicator of the intrinsic nature of the underlying star. There is some evidence, however, that some true supergiants (massive main-sequence progenitors) develop the pulsation properties and photospheric characteristics of the Mira-like OH/IR stars when they become optically obscured OH/IR stars.

Jones, Terry Jay↗

NASA NTRS1995

Thermal behavior spiral bevel gears

An experimental and analytical study of the thermal behavior of spiral bevel gears is presented. Experimental data were taken using thermocoupled test hardware and an infrared microscope. Many operational parameters were varied to investigate their effects on the thermal behavior. The data taken were also used to validate the boundary conditions applied to the analytical model. A finite element-based solution sequence was developed. The three-dimensional model was developed based on the manufacturing process for these gears. Contact between the meshing gears was found using tooth contact analysis to describe the location, curvatures, orientations, and surface velocities. This information was then used in a three-dimensional Hertzian contact analysis to predict contact ellipse size and maximum pressure. From these results, an estimate of the heat flux magnitude and the location on the finite element model was made. The finite element model used time-averaged boundary conditions to permit the solution to attain steady state in a computationally efficient manner.Then time- and position-varying boundary conditions were applied to the model to analyze the cyclic heating and cooling due to the gears meshing and transferring heat to the surroundings, respectively. The model was run in this mode until the temperature behavior stabilized. The transient flash temperature on the surface was therefore described. The analysis can be used to predict the overall expected thermal behavior of spiral bevel gears. The experimental and analytical results were compared for this study and also with a limited number of other studies. The experimental and analytical results attained in the current study were basically within 10% of each other for the cases compared. The experimental comparison was for bulk thermocouple locations and data taken with an infrared microscope. The results of a limited number of other studies were compared with those obtained herein and predicted the same basic behavior.

Handschuh, Robert F.↗