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At least 91 records · Page 5

Data Science and the Knowledge Discovery Adventure

This talk will cover the important steps involved in the data science and knowledge discovery process: • Initial fact gathering (interview domain experts, review reports, articles, state-of-the-art) • Identify the problem (prediction, classification, statistical analysis, etc.) • Survey supporting data sources • Understand the data (numerical, categorical, text, sampling rate, data quality issues, etc.) • Selecting relevant features and sources • Acquire the data (set up agreements with the data stewards, APIs to download, etc.) • Merge data sources (temporal, spatial, common key, other ontologies...) • Feature Engineering (non linear domain knowledge or physics-based relationships) • Build data processing pipeline (may need to tap into data stream, develop parallel processing algorithm, federated learning etc.) • Build model and test (tune hyper-parameters, cross validation.) • Analyze/Validate results (do the results make sense. Does it answer the original question). • Deploy/Publish (Monitor and assess benefits)

Data science↗

Enabling Scalable and Extensible Memory-mapped Datastores in Userspace

Exascale workloads are expected to incorporate data-intensive processing in close coordination with traditional physics simulations. These emerging scientific, data-analytics and machine learning applications need to access a wide variety of datastores in flat files and structured databases. Programmer productivity is greatly enhanced by mapping datastores into the application process's virtual memory space to provide a unified “in-memory” interface. Currently, memory mapping is provided by system software primarily designed for generality and reliability. However, scalability at high concurrency is a formidable challenge on exascale systems. Also, there is a need for extensibility to support new datastores potentially requiring HPC data transfer services. In this article, we present UMap , a scalable and extensible userspace service for memory-mapping datastores. Furthermore, through decoupled queue management, concurrency aware adaptation, and dynamic load balancing, UMap enables application performance to scale even at high concurrency. We evaluate UMap in data-intensive applications, including sorting, graph traversal, database operations, and metagenomic analytics. Our results show that UMap as a userspace service outperforms an optimized kernel-based service across a wide range of intra-node concurrency by 1.22-1.9 × . We performed two case studies to demonstrate UMap 's extensibility. First, a new datastore residing in remote memory is incorporated into UMap as an application-specific plugin. Second, we present a persistent memory allocator Metall built atop UMap for unified storage/memory.

97 MATHEMATICS AND COMPUTING↗

A Lookup Table Based Low Resource Usage Waveform Data Compression Block in FPGA

aA lookup table based lossless data compression scheme suitable for FPGA implementation, with very low silicon resource usage, is developed. Different algorithms can be implemented by simply changing the contents of the lookup tables in the functional block while keeping the logic circuits unchanged. It exhibits performance comparable to the zip compression software in Linux distributions. The compression block can fit into almost any existing FPGA used in the online data acquisition systems of high energy physics experiments. The decompression process can be performed in either software or in FPGA firmware, allowing users to process compressed data flexibly.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Radial diffusion in Saturn's radiation belts - A modeling analysis assuming satellite and ring E absorption

A modeling analysis is carried out of six experimental phase space density profiles for nearly equatorially mirroring protons using methods based on the approach of Thomsen et al. (1977). The form of the time-averaged radial diffusion coefficient D(L) that gives an optimal fit to the experimental profiles is determined under the assumption that simple satellite plus Ring E absorption of inwardly diffusing particles and steady-state radial diffusion are the dominant physical processes affecting the proton data in the L range that is modeled. An extension of the single-satellite model employed by Thomsen et al. to a model that includes multisatellite and ring absorption is described, and the procedures adopted for estimating characteristic satellite and ring absorption times are defined. The results obtained in applying three representative solid-body absorption models to evaluate D(L) in the range where L is between 4 and 16 are reported, and a study is made of the sensitivity of the preferred amplitude and L dependence for D(L) to the assumed model parameters. The inferred form of D(L) is then compared with that which would be predicted if various proposed physical mechanisms for driving magnetospheric radial diffusion are operative at Saturn.

Hood, L. L.↗

r-process abundances in neutron-rich merger ejecta given different theoretical nuclear physics inputs

This data release contains nucleosynthesis predictions for the r-process abundances presented in Côté, Eichler, Yagüe, Vassh et al. (2021) for compact object merger ejecta based on the publicly available simulation trajectories of Rosswog et al. (2013). All ejecta for the merger scenarios considered here are very neutron-rich (Ye ~ 0.016-0.11). Calculations were performed with the PRISM code (Mumpower et al. 2018) which accounts for nuclear reheating (here with a reheating efficiency of 50%). Results are reported for several different theoretical nuclear physics inputs but all calculations make use of the GEF fission yield prescription (see Vassh et al. 2019). All abundances are given at 1 Myr (10^6 years) post-merger. Please see the README file for more details and references. When using these nucleosynthesis yields, please cite this Zenodo data release (Vassh et al. 2021), and refer to Vassh et al. (2019) and Côté, Eichler, Yagüe, Vassh et al. (2021) for further details on the nuclear data applied as well as Rosswog et al. (2013), Piran et al. (2013), and Korobkin et al. (2012) for further details on the merger ejecta trajectories.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

The role of supernova convection for the lower mass gap in the isolated binary formation of gravitational wave sources

ABSTRACT Understanding the astrophysical phenomena involving compact objects requires an insight about the engine behind the core-collapse supernovae (SNe) and the fate of the stellar collapse of massive stars. In particular, this insight is crucial in developing an understanding of the origin and formation channels of the growing populations of the detected black hole–black hole, black hole–neutron star, and neutron star–neutron star mergers. The time-scale of convection growth may have a large effect on the strength of SN explosion and therefore also on the mass distribution of stellar remnants. We adopt new formulas for the relation between the pre-SN star properties and their remnants and check how they impact the population of double compact object (DCO) mergers formed via the isolated binary evolution. The new formulas give one the ability to test a wide spectrum of assumptions on the convection growth time. In particular, the different variants allow for a smooth transition between having a deep mass gap and a remnant mass distribution filled by massive neutron stars and low-mass black holes. We present the distribution of masses, mass ratios, and the local merger rate densities of DCO for the different variants of new formulas and test them together with different approaches to other highly uncertain processes. We find that the mass distribution of DCO mergers is sensitive to the adopted assumption on the SN convection growth time-scale up to $m_1+m_2 \lesssim 35 \, \mathrm{M}_{\odot }$. Between the two extreme tested variants the probability of compact object formation within the mass gap may differ by up to approximately two orders of magnitude.

79 ASTRONOMY AND ASTROPHYSICS↗

Integrated package of electron cyclotron emission imaging data processing and forward modeling in OMFIT

An Electron Cyclotron Emission Imaging (ECEI) data analysis module has been developed for the OMFIT platform to accommodate the needs of users at the DIII-D tokamak for physics applications. The user can easily access the ECEI spatial observation windows in the plasma that are calculated based on the automatically retrieved hardware setup and available DIII-D equilibria, perform spectral analysis, and make 2D electron temperature fluctuation images. The module provides a powerful data post processing package for extracting important physics parameters from the 2D measurements, including the radial structure and poloidal mode number of Alfven Eigenmodes, as well as the frequency-vs-wavenumber dispersion relationship of broadband MHD. Lastly, the module propagates characterized synthetic fluctuations for the user, so one can perform forward modeling tasks with simple analytical fluctuations.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

A robust deep learning workflow to predict multiphase flow behavior during geological C O 2 sequestration injection and Post-Injection periods

Simulation of multiphase flow in porous media is essential to manage the geologic CO 2 sequestration (GCS) process, and physics-based simulation approaches usually take prohibitively high computational cost due to the nonlinearity of the coupled physics. This paper contributes to the development and evaluation of a deep learning workflow that accurately and efficiently predicts the temporal-spatial evolution of pressure and CO 2 plumes during injection and post-injection periods of GCS operations. Based on a Fourier Neural Operator, the deep learning workflow takes input variables or features including rock properties, well operational controls and time steps, and predicts the state variables of pressure and CO 2 saturation. To further improve the predictive fidelity, separate deep learning models are trained for CO 2 injection and post-injection periods due to the difference in primary driving force of fluid flow and transport during these two phases. We also explore different combinations of features to predict the state variables. We use a realistic example of CO 2 injection and storage in a 3D heterogeneous saline aquifer, and apply the deep learning workflow that is trained from physics-based simulation data and emulate the physics process. Through this numerical experiment, we demonstrate that using two separate deep learning models to distinguish post-injection from injection period generates the most accurate prediction of pressure, and a single deep learning model of the whole GCS process including the cumulative injection volume of CO 2 as a deep learning feature, leads to the most accurate prediction of CO 2 saturation. For the post-injection period, it is key to use cumulative CO 2 injection volume to inform the deep learning models about the total carbon storage when predicting either pressure or saturation. The deep learning workflow not only provides high predictive fidelity across temporal and spatial scales, but also offers a speedup of 250 times compared to full physics reservoir simulation, and thus will be a significant predictive tool for engineers to manage the long-term process of GCS.

58 GEOSCIENCES↗

Overview of the distributed image processing infrastructure to produce the Legacy Survey of Space and Time

The Vera C. Rubin Observatory is preparing to execute the most ambitious astronomical survey ever attempted, the Legacy Survey of Space and Time (LSST). Currently the final phase of construction is under way in the Chilean Andes, with the Observatory’s ten-year science mission scheduled to begin in 2025. Rubin’s 8.4-meter telescope will nightly scan the southern hemisphere collecting imagery in the wavelength range 320–1050 nm covering the entire observable sky every 4 nights using a 3.2 gigapixel camera, the largest imaging device ever built for astronomy. Automated detection and classification of celestial objects will be performed by sophisticated algorithms on high-resolution images to progressively produce an astronomical catalog eventually composed of 20 billion galaxies and 17 billion stars and their associated physical properties. In this article we present an overview of the system currently being constructed to perform data distribution as well as the annual campaigns which reprocess the entire image dataset collected since the beginning of the survey. These processing campaigns will utilize computing and storage resources provided by three Rubin data facilities (one in the US and two in Europe). Each year a Data Release will be produced and disseminated to science collaborations for use in studies comprising four main science pillars: probing dark matter and dark energy, taking inventory of solar system objects, exploring the transient optical sky and mapping the Milky Way. Also presented is the method by which we leverage some of the common tools and best practices used for management of large-scale distributed data processing projects in the high energy physics and astronomy communities. We also demonstrate how these tools and practices are utilized within the Rubin project in order to overcome the specific challenges faced by the Observatory.

79 ASTRONOMY AND ASTROPHYSICS↗

Definition of a new (Doniach-Sunjic-Shirley) peak shape for fitting asymmetric signals applied to reduced graphene oxide/graphene oxide XPS spectra

The existence of asymmetry in X-ray photoelectron spectroscopy (XPS) photoemission lines is widely accepted, but line shapes designed to accommodate asymmetry are generally lacking in theoretical justification. Here in this work, we present a new line shape for describing asymmetry in XPS signals that is based on two facts. First, the most widely known line shape for fitting asymmetric XPS signals that has a theoretical basis, referred to as the Doniach-Sunjic (DS) line shape, suffers from a mathematical inconvenience, which is that for asymmetric shapes the area beneath the curve (above the x-axis) is infinite. Second, it is common practice in XPS to remove the inelastically scattered background response of a peak in question with the Shirley algorithm. The new line shape described herein attempts to retain the theoretical virtues of the DS line shape, while allowing the use of a Shirley background, with the consequence that the resulting line shape has a finite area. To illustrate the use of this Doniach-Sunjic-Shirley (DSS) line shape, a set of spectra obtained from varying amounts of graphene oxide (GO) and reduced GO on a patterned, heterogeneous surface are fit and discussed.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Approximate recoverability and relative entropy II: 2-positive channels of general von Neumann algebras

Abstract We generalize our results in paper I in this series to quantum channels between general von Neumann algebras, proving the approximate recoverability of states which undergo a small change in relative entropy through the channel. To this end, we derive a strengthened form of the quantum data processing inequality for the change in relative entropy of two states under a channel between two von Neumann algebras. Compared to the usual inequality, there is an explicit lower bound involving the fidelity between the original state and a recovery channel.

97 MATHEMATICS AND COMPUTING↗

Density weighted angular redshift fluctuations: a new cosmological observable

We propose the use of angular fluctuations in the galaxy redshift field as a new way to extract cosmological information in the Universe. This new probe $\delta z (\hat{\mathbf {n}})$ consists of the statistics of sky maps built by projecting redshifts under a Gaussian window of width σz centred upon a redshift zobs, and weighted by the galaxy density field. We compute the angular power spectrum of the $\delta z (\hat{\mathbf {n}})$ field in both numerical simulations and in linear perturbation theory. From these, we find that the $\delta z (\hat{\mathbf {n}})$ field (i) is sensitive to the underlying density and peculiar velocity fields; (ii) is highly correlated, at the $\gtrsim 60\, {{\ \rm per\ cent}}$ level, to the line-of-sight projected peculiar velocity field; (iii) for narrow windows (σz < 0.03), it is almost completely uncorrelated to the projected galaxy angular density field under the same redshift window; and (iv) it is largely unaffected by multiplicative and additive systematic errors on the observed number of galaxies that are redshift-independent over ~σz. We conclude that $\delta z (\hat{\mathbf {n}})$ is a simple and robust tomographic measure of the cosmic density and velocity fields, complementary to angular clustering, that will contribute to more complete exploitations of current and upcoming galaxy redshift surveys.

79 ASTRONOMY AND ASTROPHYSICS↗

Unsupervised quantum circuit learning in high energy physics

Unsupervised training of generative models is a machine learning task that has many applications in scientific computing. Here, in this work, we evaluate the efficacy of using quantum circuit-based generative models to generate synthetic data of high energy physics processes. We use nonadversarial, gradient-based training of quantum circuit Born machines to generate joint distributions over two and three variables.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Abstract for CRADA among National Energy Technology Laboratory, Research Triangle Institute, Lawrence Livermore National Laboratory, and Los Alamos National Laboratory (AGMT-0921)

Through the Carbon Capture Simulation for Industry Impact (CCSI 2 ) project, the National Energy Technology Laboratory (NETL), Lawrence Livermore National Laboratory (LLNL), and Los Alamos National Laboratory (LANL) (herein collectively “the CCSI 2 team”) will collaborate through a CRADA with the Research Triangle Institute (RTI). This collaboration will develop a modeling framework of RTI’s Non-Aqueous Solvent (NAS) process using physical and thermodynamic data and models previously developed by RTI. RTI will provide existing models and data on its NAS system to inform the model construction effort by the CCSI 2 team.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Chromium Nucleosynthesis and Silicon–Carbon Shell Mergers in Massive Stars

In this work, we analyze the production of the element Cr in galactic chemical evolution (GCE) models using the NuGrid nucleosynthesis yields set. We show that the unusually large [Cr/Fe] abundance at [Fe/H] ≈ 0 reported by previous studies using those yields and predicted by our Milky Way model originates from the merging of convective Si-burning and C-burning shells in a 20 ${M}_{\odot }$ model at metallicity Z = 0.01, about an hour before the star explodes. This merger mixes the incomplete burning material in the Si shell, including 51 V and 52 Cr, out to the edge of the carbon/oxygen (CO) core. The adopted supernova model ejects the outer 2 ${M}_{\odot }$ of the CO core, which includes a significant fraction of the Cr-rich material. When including this 20 M⊙ model at Z = 0.01 in the yields interpolation scheme of our GCE model for stars between 15 and 25 ${M}_{\odot }$, we overestimate [Cr/Fe] by an order of magnitude at [Fe/H] ≈ 0 relative to observations in the Galactic disk. This raises a number of questions regarding the occurrence of Si–C shell mergers in nature, the accuracy of different simulation approaches, and the impact of such mergers on the presupernova structure and explosion dynamics. According to the conditions in this 1D stellar model, the substantial penetration of C-shell material into the Si shell could launch a convective–reactive global oscillation if a merger does take place. In any case, GCE provides stringent constraints on the outcome of this stellar evolution phase.

79 ASTRONOMY AND ASTROPHYSICS↗

S-6, AN AERONOMY SATELLITE

Mission and design requirements for the nasa s-6 satellite including instrumentation necessary to obtain data on physical and chemical processes in the upper-atmosphere between 250 and 900 kilometers

EXPLORER XVII SATELLITE↗

Considerations for an earth physics information-management service.

In a preliminary investigation into the feasibility of establishing a data center for earth physics, 12 disciplines were considered for inclusion. Estimation of the size of the data base for each indicated a need for storage of approximately 10 to the 10th power characters. The computer-based system deemed most worthy of further investigation was the interactive concept with remote-terminal access. Users are divided into three classes according to how they would access information: with no terminal, with an interactive terminal, and with a multidevice terminal. All these users can be served by the same center without any particular difficulty, but the real benefactor is the user with an interactive terminal, because he can compile, debug, and run programs in one continuous session. Final points stressed are multiprogramming for dynamic resource sharing, hardware modularity for future expansion, and information protection for such a large community of users. It is concluded that a survey should be conducted to gather more information from the potential users of such a system, and that a pilot project should be developed at some location where both earth-physics research and data-processing capabilities already exist.

Martin, R. W.↗