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An interactive environment for the analysis of large Earth observation and model data sets

Envision is an interactive environment that provides researchers in the earth sciences convenient ways to manage, browse, and visualize large observed or model data sets. Its main features are support for the netCDF and HDF file formats, an easy to use X/Motif user interface, a client-server configuration, and portability to many UNIX workstations. The Envision package also provides new ways to view and change metadata in a set of data files. It permits a scientist to conveniently and efficiently manage large data sets consisting of many data files. It also provides links to popular visualization tools so that data can be quickly browsed. Envision is a public domain package, freely available to the scientific community. Envision software (binaries and source code) and documentation can be obtained from either of these servers: ftp://vista.atmos.uiuc.edu/pub/envision/ and ftp://csrp.tamu.edu/pub/envision/. Detailed descriptions of Envision capabilities and operations can be found in the User's Guide and Reference Manuals distributed with Envision software.

Bowman, Kenneth P.

Incorporation of polarimetric radar images into multisensor data sets

A technique is presented for registering polarimetric SAR data to other aircraft and spaceborne data sets. Resampling is done on the full Stokes matrix, allowing full polarization synthesis on the coregistered data set. Analysis of data acquired over Pisgah Crater in the Mojave Desert, CA, as part of the Mojave Field Experiment shown that the resampling does not seriously affect the pedestal heights of polarization signatures or affect estimates of RMS heights for smooth to moderately rough surfaces.

Evans, Diane L.

NASA Ocean Altimeter Pathfinder Project: Data Set Validation - Report 2

The NOAA/NASA Pathfinder program was created by the Earth Observing System (EOS) Program Office to determine how existing satellite-based data sets can be processed and used to study global change. The data sets are designed to be long time-series data processed with stable calibration and community consensus algorithms to better assist the research community. The Ocean Altimeter Pathfinder Project involves the reprocessing of all altimeter observations with a consistent set of improved algorithms, based on the results from TOPEX/POSEIDON (T/P), into easy-to-use data sets for the oceanographic community for climate research. Details are currently presented in two technical reports: Report# 1: Data Processing Handbook Report #2: Data Set Validation This report describes the validation of the data sets against a global network of high quality tide gauge measurements and provides an estimate of the error budget. The first report describes the processing schemes used to produce the geodetic consistent data set comprised of SEASAT, GEOSAT, ERS-1, TOPEX/ POSEIDON, and ERS-2 satellite observations.

Koblinsky, C. J.

Autogenerating a Domain-Specific Question-Answering Data Set from a Thermoelectric Materials Database to Enable High-Performing BERT Models

We present a method for autogenerating a large domain-specific question-answering (QA) dataset from a thermoelectric materials database. We show that a small language model, BERT, once fine-tuned on this automatically generated dataset of 99,757 QA pairs about thermoelectric materials, affords better performance in the field of thermoelectric materials compared to a BERT model fine-tuned on the generic English-language QA data set, SQuAD-v2. We further show that mixing the two data sets (ours and SQuAD-v2), which have significantly different syntactic and semantic scopes, allows the BERT model to achieve even better performance. The best-performing BERT model fine-tuned on the mixed data set outperforms the models fine-tuned on the other two data sets by scoring an exact match of 67.93% and an F1 score of 72.29% when evaluated on our test data set. This has important implications as it demonstrates the ability to realize high-performing small language models, with modest computational resources, empowered by domain-specific materials data sets which can be generated according to our method.

biological databases

An interactive environment for the analysis of large Earth observation and model data sets

We propose to develop an interactive environment for the analysis of large Earth science observation and model data sets. We will use a standard scientific data storage format and a large capacity (greater than 20 GB) optical disk system for data management; develop libraries for coordinate transformation and regridding of data sets; modify the NCSA X Image and X Data Slice software for typical Earth observation data sets by including map transformations and missing data handling; develop analysis tools for common mathematical and statistical operations; integrate the components described above into a system for the analysis and comparison of observations and model results; and distribute software and documentation to the scientific community.

Bowman, Kenneth P.

Data catalog series for space science and applications flight missions. Volume 4B: Descriptions of data sets from meteorological and terrestrial applications spacecraft and investigations

The main purpose of the data catalog series is to provide descriptive references to data generated by space science flight missions. The data sets described include all of the actual holdings of the Space Science Data Center (NSSDC), all data sets for which direct contact information is available, and some data collections held and serviced by foreign investigators, NASA and other U.S. government agencies. This volume contains narrative descriptions of data sets from meteorological and terrestrial applications spacecraft and investigations. The following spacecraft series are included: Mariner, Pioneer, Pioneer Venus, Venera, Viking, Voyager, and Helios. Separate indexes to the planetary and interplanetary missions are also provided.

Ng, Carolyn

An interactive environment for the analysis of large Earth observation and model data sets

We propose to develop an interactive environment for the analysis of large Earth science observation and model data sets. We will use a standard scientific data storage format and a large capacity (greater than 20 GB) optical disk system for data management; develop libraries for coordinate transformation and regridding of data sets; modify the NCSA X Image and X DataSlice software for typical Earth observation data sets by including map transformations and missing data handling; develop analysis tools for common mathematical and statistical operations; integrate the components described above into a system for the analysis and comparison of observations and model results; and distribute software and documentation to the scientific community.

Bowman, Kenneth P.

Physics Mining of Multi-Source Data Sets

Powerful new parallel data mining algorithms can produce diagnostic and prognostic numerical models and analyses from observational data. These techniques yield higher-resolution measures than ever before of environmental parameters by fusing synoptic imagery and time-series measurements. These techniques are general and relevant to observational data, including raster, vector, and scalar, and can be applied in all Earth- and environmental science domains. Because they can be highly automated and are parallel, they scale to large spatial domains and are well suited to change and gap detection. This makes it possible to analyze spatial and temporal gaps in information, and facilitates within-mission replanning to optimize the allocation of observational resources. The basis of the innovation is the extension of a recently developed set of algorithms packaged into MineTool to multi-variate time-series data. MineTool is unique in that it automates the various steps of the data mining process, thus making it amenable to autonomous analysis of large data sets. Unlike techniques such as Artificial Neural Nets, which yield a blackbox solution, MineTool's outcome is always an analytical model in parametric form that expresses the output in terms of the input variables. This has the advantage that the derived equation can then be used to gain insight into the physical relevance and relative importance of the parameters and coefficients in the model. This is referred to as physics-mining of data. The capabilities of MineTool are extended to include both supervised and unsupervised algorithms, handle multi-type data sets, and parallelize it.

Helly, John

Management and display of four-dimensional environmental data sets using McIDAS

Over the past four years, great strides have been made in the areas of data management and display of 4-D meteorological data sets. A survey was conducted of available and planned 4-D meteorological data sources. The data types were evaluated for their impact on the data management and display system. The requirements were analyzed for data base management generated by the 4-D data display system. The suitability of the existing data base management procedures and file structure were evaluated in light of the new requirements. Where needed, new data base management tools and file procedures were designed and implemented. The quality of the basic 4-D data sets was assured. The interpolation and extrapolation techniques of the 4-D data were investigated. The 4-D data from various sources were combined to make a uniform and consistent data set for display purposes. Data display software was designed to create abstract line graphic 3-D displays. Realistic shaded 3-D displays were created. Animation routines for these displays were developed in order to produce a dynamic 4-D presentation. A prototype dynamic color stereo workstation was implemented. A computer functional design specification was produced based on interactive studies and user feedback.

Hibbard, William L.

Data catalog series for space science and applications flight missions. Volume 5A: Descriptions of astronomy, astrophysics, and solar physics spacecraft and investigations. Volume 5B: Descriptions of data sets from astronomy, astrophysics, and solar physics spacecraft and investigations

The main purpose of the data catalog series is to provide descriptive references to data generated by space science flight missions. The data sets described include all of the actual holdings of the Space Science Data Center (NSSDC), all data sets for which direct contact information is available, and some data collections held and serviced by foreign investigators, NASA and other U.S. government agencies. This volume contains narrative descriptions of data sets of astronomy, astrophysics, solar physics spacecraft and investigations. The following spacecraft series are included: Mariner, Pioneer, Pioneer Venus, Venera, Viking, Voyager, and Helios. Separate indexes to the planetary and interplanetary missions are also provided.

Kim, Sang J.

Constructing a coherent long-term global total ozone climatology from the BUV, MFR, and SBUV/TOMS data sets

Multichannel Filter Radiometer (MFR) data are intercompared with Solar Backscattered Ultraviolet (SBUV) and Total Ozone Mapping Spectrometer (TOMS) data during a five-month period of their data overlap in order to determine the usefulness of MFR data to represent the SBUV/TOMS and backscatter ultraviolet spectrometer data during their data gap period. Total ozone differences found were latitudinally and monthly dependent. Average differences between the TOMS and the MFR ozone data vary from -12.4 to +13.3 percent, with differences in the tropical to middle latitudes generally between + or - 4 percent. Biases between the data sets can be removed for certain latitude zones by applying an appropriate algorithm to the MFR ozone data.

Ellis, J. S.

Consistency Between Tropical Divergent Circulations from Reanalysis Data Sets and Satellite-Derived Precipitation, Radiation, and Surface Fluxes

Large-scale divergent circulations are part of the atmospheric dynamic response to diabatic heating from condensation, radiative processes, and surface heat fluxes. Vertical motion and the associated divergent wind is thus intimately tied to the hydrologic cycle and the global heat balance. Vertical motions are recovered diagnostically from reanalyses and, as such, are subject to shortcommings in model physics, numerics, and data availability. We use several Global Energy and Water Cycle Experiment (GEWEX) Earth Observation System (EOS) data sets derived from satellite data to assess interannual divergent flow anomalies in the National Centers for Environmental Prediction (NCEP), Goddard Space Flight Center (GSFC), and GSFC Data Assimilation Office (DAO) analyses. Among the data sets are monthly, 2.5 degree gridded precipitation (Microwave Sounding Unit (MSU) and Special Sensor Microwave Imager (SSM/I-based)), Top or the atmosphere (TOA) radiative fluxes from ERBS, surface radiative fluxes from the SRB project, and surface latent and sensible flux estimates from SSM/I. These data sets can be considered as independent of the reanalysis fields. We focus largely on the period 1987-1989 encompassing a strong El Nino / la Nina couplet. Consequently we emphasize interannual changes as well as climatological aspects of the reanalyses. In the processes of this study we use simple integral constraints enforced through the satellite-derived data sets to derive corrections to the divergent circulation produced from the reanalyses. We examine the implications of these corrections in describing how perturbations to the tropical heat balance evolve during a warm / cool couplet. In particular the perturbations to the planetary scale water vapor transport, and the resulting changes in TOA and surface radiative fluxes are considered.

Robertson, Franklin R.

Annual and interannual variations of absorbed solar radiation based on a 10-year data set

Annual and interannual variations of absorbed solar radiation (ASR) are studied using the 10-year earth radiation budget data set from the Nimbus-6 and Nimbus-7 earth radiation budget instruments in the form of monthly averaged maps of ASR. Empirical orthogonal functions (EOFs) are computed for the global distribution of ASR. Six EOFs are found which have physical significance and which account for 97.8 percent of the spatial variance of the data set. The first EOF describes the annual cycle and is primarily a latitudinal variation which is driven by the incident solar radiation. The second and fourth EOFs are semiannual cycles. EOFs 3 through 6 are strongly longitudinally dependent. EOF 3 describes the spring/fall part of the annual cycle, and EOF 4 describes the part of the semiannual cycle which is out of phase with EOF 2. EOF 5 is the response of the ASR to El Nino. The annual cycle and its harmonics account for 97.6 percent of the variance with time. When the data set is deseasonalized, the first two EOFs of the resulting set are found to correspond closely to EOFs 5 and 6 of the data set with season included. As with outgoing longwave radiation, most of the interannual variation is found over the tropical oceans.

Smith, G. Louis

Digital images of combined oceanic and continental data sets and their use in tectonic studies

It is shown how crustal and lithospheric studies can benefit when continental and oceanic data sets are combined. It is also shown how digital imaging techniques provide an effective means for displaying the information contained in these combined data sets. The region of Australia, New Zealand, and the surrounding ocean is chosen for illustrating the advantages of combining continental and oceanic data sets. Here, the tectonic setting of Australia, a relatively stable continent in an intraplate environment, can be contrasted with New Zealand, which is traversed by one of the world's major plate boundaries. Simultaneous display and analysis of complementary data sets make possible a rapid geologic and tectonic interpretation of regional areas. It is shown, by way of example, that the relationship between topography and gravity anomalies in central Australia gives important new information concerning the state of isostasy of thrust terrains and their related sedimentary basins and hence provides a means of understanding the mechanical properties of the continental lithosphere.

Haxby, W. F.

Data Set Analysis to Reduce Uncertainty in Formula Assignments of Ultrahigh Resolution Mass Spectra

Environmental samples contain a vast array of organic compounds with diverse elemental compositions and heteroatom content. Molecular formula assignments of ultrahigh resolution mass spectra (HRMS) hold promise for elucidating the molecular composition of these compounds. However, the need to account for an assortment of heteroatoms increases the uncertainty associated with individual assignments – and ultimately the ecological, biological, and biogeochemical insights gleaned from the assignments. To address this challenge, we introduce a formula assignment strategy that leverages HRMS data sets to improve assignment confidence, filter false assignments, and mitigate bias in assignment routines. The strategy, implemented using CoreMS, first identifies the highest confidence assignment for a recurring ion in a data set by assessing the mass accuracy and isotopologue similarity of all assignments to the ion across the data set. The second component of the strategy examines the consistency of mass errors for an assigned ion throughout a data set and flags formulas with statistically unlikely deviations in mass error. Here, we illustrate the application and utility of the strategy by comparing its results against documented misassignment patterns within a set of oceanographic samples that were measured with 21 T Fourier Transform Ion Cyclotron Resonance Mass Spectrometry. Because the efficacy of our strategy improves with data set size, it is particularly useful for enhancing assignment confidence in large HRMS data sets common in studies of environmental systems.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH

The Extraction of One-Dimensional Flow Properties from Multi-Dimensional Data Sets

The engineering design and analysis of air-breathing propulsion systems relies heavily on zero- or one-dimensional properties (e.g. thrust, total pressure recovery, mixing and combustion efficiency, etc.) for figures of merit. The extraction of these parameters from experimental data sets and/or multi-dimensional computational data sets is therefore an important aspect of the design process. A variety of methods exist for extracting performance measures from multi-dimensional data sets. Some of the information contained in the multi-dimensional flow is inevitably lost when any one-dimensionalization technique is applied. Hence, the unique assumptions associated with a given approach may result in one-dimensional properties that are significantly different than those extracted using alternative approaches. The purpose of this effort is to examine some of the more popular methods used for the extraction of performance measures from multi-dimensional data sets, reveal the strengths and weaknesses of each approach, and highlight various numerical issues that result when mapping data from a multi-dimensional space to a space of one dimension.

Baurle, Robert A.

The Art of Extracting One-Dimensional Flow Properties from Multi-Dimensional Data Sets

The engineering design and analysis of air-breathing propulsion systems relies heavily on zero- or one-dimensional properties (e:g: thrust, total pressure recovery, mixing and combustion efficiency, etc.) for figures of merit. The extraction of these parameters from experimental data sets and/or multi-dimensional computational data sets is therefore an important aspect of the design process. A variety of methods exist for extracting performance measures from multi-dimensional data sets. Some of the information contained in the multi-dimensional flow is inevitably lost when any one-dimensionalization technique is applied. Hence, the unique assumptions associated with a given approach may result in one-dimensional properties that are significantly different than those extracted using alternative approaches. The purpose of this effort is to examine some of the more popular methods used for the extraction of performance measures from multi-dimensional data sets, reveal the strengths and weaknesses of each approach, and highlight various numerical issues that result when mapping data from a multi-dimensional space to a space of one dimension.

Baurle, R. A.

Consistency Between Divergent Circulations from Reanalysis Data Sets and Satellite-Derived Precipitation, Radiation, and Surface Fluxes

Large-scale divergent circulations are part of the atmospheric dynamic response to diabatic heating from condensation, radiative processes, and surface heat fluxes. Vertical motion and the associated divergent wind is thus intimately tied to the hydrologic cycle and the global heat balance. Despite its importance, the divergent circulation is too small in comparison to the rotational flow to measure directly with any accuracy. Vertical motions are recovered diagnostically from reanalyses and, as such, are subject to shortcomings in model physics, numerics, and data availability. We use several GEWEX pre-EOS data sets derived from satellite data to assess interannual divergent flow anomalies in the NCEP, GSFC, and GSFC DAO analyse. Among the data sets are monthly, 2.5 degree gridded precipitation (MSU and SSM/I-based), TOA radiative fluxes from ERBS, surface radiative fluxes from the SRB project, and surface latent and sensible flux estimates from SSM/I. Most of these data sets can be considered as independent of the reanalysis fields. We focus largely on the period 1987-1989 encompassing a strong El Nino / la Nina couplet. Consequently we emphasize interannual changes rather than climatological aspects of the reanalyses. In the processes of this study we use simple integral constraints enforced through the satellite-derived data sets to derive corrections to the divergent circulation produced from the reanalyses. We examine the implications of these corrections in describing how perturbations to the tropical heat balance evolve during a warm / cool couplet. In particular the perturbations to the planetary scale water vapor transport, and the resulting changes in TOA and surface radiative fluxes are considered.

Robertson, Franklin R.