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At least 91 records · Page 5

Architecture for Quantum-in-the Loop Real-Time Simulations for Designing Resilient Smart Grids

With the power grid growing more complex every day with the inclusion of new sensors and regulatory approvals that enable end-users and small local developers to participate in the grid, it is becoming challenging for conventional smart grid simulation, emulation, and testing technologies to keep up. In this work, we propose that quantum-encoded real-time simulations can be helpful under the new paradigm and operational circumstances to solve optimization problems for power grids. By leveraging the principles of quantum mechanics, the proposed quantum-in-loop (QIL) framework will enable better and faster optimization solutions based on real-world, real-time data streams, facilitating the real-time planning and operations of electrical grids that rely on millions of distributed sensors and controllers. Furthermore, QIL will allow researchers and engineers to assist utilities in designing, developing, and de-risking algorithms to optimize power grid operation and resilience by considering inputs from millions of grid-connected devices. QIL framework is being developed to have a self-limiting triage mechanism, which will help engineers and practitioners identify fundamental physical limits on quantum processors, revealing what quantum algorithms can and cannot do in utility-specific use cases and must continue to count on classical high-performance computing infrastructure.

digital real-time simulation↗

A Multi-layer, Data-driven Advanced Reasoning Tool for Intelligent Data Mining and Analysis for Smart Grids

This paper presents the multi-layer, data-driven advanced reasoning tool (M-DART), a proof-of-principle decision support tool for improved power system operation. M-DART will cross-correlate and examine different data sources to assess anomalies, infer root causes, and anneal data into actionable information. By performing higher-level reasoning “triage” of diverse data sources, M-DART focuses on early detection of emerging power system events and identifies highest priority actions for the human decision maker. M-DART represents a significant advancement over today’s grid monitoring technologies that apply offline analyses to derive model-based guidelines for online real-time operations and use isolated data processing mechanisms focusing on individual data domains. The development of the M-DART will bridge these gaps by reasoning about results obtained from multiple data sources that are enabled by the smart grid infrastructure. This hybrid approach integrates a knowledge base that is trained offline but tuned online to capture model-based relationships while revealing complex causal relationships among data from different domains.

data mining, reasoning, smart grid, AMI, power gen↗

SU-F-BRB-10: A Statistical Voxel Based Normal Organ Dose Prediction Model for Coplanar and Non-Coplanar Prostate Radiotherapy

Purpose: Knowledge learned from previous plans can be used to guide future treatment planning. Existing knowledge-based treatment planning methods study the correlation between organ geometry and dose volume histogram (DVH), which is a lossy representation of the complete dose distribution. A statistical voxel dose learning (SVDL) model was developed that includes the complete dose volume information. Its accuracy of predicting volumetric-modulated arc therapy (VMAT) and non-coplanar 4π radiotherapy was quantified. SVDL provided more isotropic dose gradients and may improve knowledge-based planning. Methods: 12 prostate SBRT patients originally treated using two full-arc VMAT techniques were re-planned with 4π using 20 intensity-modulated non-coplanar fields to a prescription dose of 40 Gy. The bladder and rectum voxels were binned based on their distances to the PTV. The dose distribution in each bin was resampled by convolving to a Gaussian kernel, resulting in 1000 data points in each bin that predicted the statistical dose information of a voxel with unknown dose in a new patient without triaging information that may be collectively important to a particular patient. We used this method to predict the DVHs, mean and max doses in a leave-one-out cross validation (LOOCV) test and compared its performance against lossy estimators including mean, median, mode, Poisson and Rayleigh of the voxelized dose distributions. Results: SVDL predicted the bladder and rectum doses more accurately than other estimators, giving mean percentile errors ranging from 13.35–19.46%, 4.81–19.47%, 22.49–28.69%, 23.35–30.5%, 21.05–53.93% for predicting mean, max dose, V20, V35, and V40 respectively, to OARs in both planning techniques. The prediction errors were generally lower for 4π than VMAT. Conclusion: By employing all dose volume information in the SVDL model, the OAR doses were more accurately predicted. 4π plans are better suited for knowledge-based planning than the VMAT plans that are strongly biased in its dose gradient orientation. This project is supported by Varian Medical Systems.

60 APPLIED LIFE SCIENCES↗

Sea-level rise and archaeological site destruction: An example from the southeastern United States using DINAA (Digital Index of North American Archaeology)

The impact of changing climate on terrestrial and underwater archaeological sites, historic buildings, and cultural landscapes can be examined through quantitatively-based analyses encompassing large data samples and broad geographic and temporal scales. The Digital Index of North American Archaeology (DINAA) is a multi-institutional collaboration that allows researchers online access to linked heritage data from multiple sources and data sets. The effects of sea-level rise and concomitant human population relocation is examined using a sample from nine states encompassing much of the Gulf and Atlantic coasts of the southeastern United States. A 1 m rise in sea-level will result in the loss of over >13,000 recorded historic and prehistoric archaeological sites, as well as over 1000 locations currently eligible for inclusion on the National Register of Historic Places (NRHP), encompassing archaeological sites, standing structures, and other cultural properties. These numbers increase substantially with each additional 1 m rise in sea level, with >32,000 archaeological sites and >2400 NRHP properties lost should a 5 m rise occur. Many more unrecorded archaeological and historic sites will also be lost as large areas of the landscape are flooded. The displacement of millions of people due to rising seas will cause additional impacts where these populations resettle. Sea level rise will thus result in the loss of much of the record of human habitation of the coastal margin in the Southeast within the next one to two centuries, and the numbers indicate the magnitude of the impact on the archaeological record globally. Construction of large linked data sets is essential to developing procedures for sampling, triage, and mitigation of these impacts.

54 ENVIRONMENTAL SCIENCES↗

Identification of Differential Gene Expression Patterns after Acute Exposure to High and Low Doses of Low-LET Ionizing Radiation in a Reconstituted Human Skin Tissue

Our goal here was to identify dose and temporal dependent radiation responses in a complex tissue, reconstituted human skin. Direct sequencing of RNA (RNA-seq) was used to quantify altered transcripts following exposure to 0.1, 2 and 10 Gy of ionizing radiation at 3 and 8 hours. These doses include a low dose in the range of some medical diagnostic procedures (0.1 Gy), a dose typically received during radiotherapy (2.0 Gy) and a lethal dose (10 Gy). These doses could be received after an intentional or accidental radiation exposure and biomarkers are needed to rapidly and accurately triage exposed individuals. A total of 1701 genes were deemed to be significantly affected by high dose radiation exposure with the majority of genes affected at 10 Gy. A group of 29 genes including GDF15, BBC3, PPM1D, FDXR, GADD45A, MDM2, CDKN1A, TP53INP1, CYCSP27, SESN1, SESN2, PCNA, and AEN were similarly altered at both 2 and 10 Gy, but not 0.1 Gy, at multiple time points. A much larger group of up regulated genes, including those involved in inflammatory responses, was significantly altered only after a 10 Gy exposure. At high doses, down regulated genes were associated with cell cycle regulation and exhibited an apparent linear response between 2 and 10 Gy. While only a handful of genes were significantly affected by 0.1 Gy exposure using stringent statistical filters, groups of related genes regulating cell cycle progression and inflammatory responses consistently exhibited opposite trends in their regulation compared to the high dose exposures. Differential regulation of PLK1 signaling at low and high doses was confirmed using qRT-PCR. These results indicate that some alterations in gene expression are qualitatively different at low and high doses of radiation in this model system.

62 RADIOLOGY AND NUCLEAR MEDICINE↗

Challenges and Opportunities in Turning Large U.S. Archives of Analog Seismograms into a Modern Usable Resource

Abstract Quantitative seismology is based firmly on the analysis of actual ground motions, and the transition to digital recording in the 1980s enabled sophisticated new capabilities to extract useful results from waveforms. With some effort, these tools can also be applied to analog records. Focusing on assets available within U.S. institutions, we review the necessary steps and the challenges in enabling “data rescue”—that is, preserving the scientific information latent in large analog seismogram archives and making it usable. They include: determining what assets are available (the analog seismogram archives held by various institutions, with associated metadata on instrument responses, station locations, and timing information); developing a consensus on the top level of a triage process (which analog records most definitely should be rescued?); deciding the level of quality needed in copying original seismograms to media suitable for digitizing; assessing the relative merits of scanning and digitizing; and, the need for a community service in distributing scans and digital records, as they accumulate. The necessary level of effort can benefit from practical experience. For example, specific studies have used digitized versions of analog recordings to model earthquake sources and assess seismic hazard. Other studies have used them to gain experience with nuclear explosion signals recorded at regional distances, noting that regional signals enable explosions to be monitored down to levels much lower than those attainable teleseismically. The opportunities presented by large archives of analog seismograms include the insights they present to current and future seismologists studying earthquakes and explosions, into the practical areas of assessing seismic hazard, monitoring for test ban compliance down to low explosion yields—and prompt characterization of actual explosions should they occur, as well the traditional academic pursuit of a better understanding of earthquake physics.

Geochemistry & Geophysics↗

LANL CSSE L2: Case Study of In Situ Data Analysis in ASC Integrated Codes [Slides]

The massive, complex datasets generated by scientific simulations on next-generation computer architectures at extreme scale pose new challenges for data management and scientific understanding. A critical element in meeting these new challenges is in situ data analysis where information is reduced and analyzed as close to the point of generation as possible, for example, at run time or as the data stream to longer term storage. This milestone will demonstrate in situ data analysis in xRAGE, an ASC Eulerian Radiation Hydrodynamics code. We will work with the Eulerian Applications Project to identify target problems that will exercise physics of interest to the program, and we will work closely with users to maximize the achieved usability and productivity improvements. We will investigate enhancements to the in situ process that enable and improve techniques of data reduction and data triage in addition to improving in situ performance by using portable acceleration technology. We will report on their viability and performance in xRAGE or another ASC code. These products will provide ASC IC developers with reference codes and tools that will benefit DSW by advancing the technology for predictive science at extreme scales.

97 MATHEMATICS AND COMPUTING↗

Radiation Detection Overview for Nuclear Emergency Response

This presentation discusses the fundamentals of gamma and neutron detection; presents an overview of the DOE Triage and JTOT Programs, gamma, and neutron signatures in select measurements; and offers a detector demonstration.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Transportation Modeling and Global Health

A patient in the United States has been diagnosed with Ebola. Fear and panic kicks in across the country, and hospitals are inundated with hundreds of people, some infected with the highly contagious disease and others not. Blood tests are needed for positive diagnoses, but the diagnostic labs are overwhelmed with blood samples to test, and staff are overworked and stressed. Infected people need to be quarantined and treated, but it's hard to find rooms to quarantine so many patients. Sick people who need triage and regular care for other emergencies are afraid to go to hospitals for fear of Ebola, which has a 50% fatality rate. And since hospitals are so overwhelmed, sick people often stay home, infecting heathy people around them; the U.S. is now in the grips a full-blown Ebola outbreak. Sandia's high-performance computers simulated such a nightmare scenario recently, and with good reason. An Ebola outbreak in the United States could be devastating if hospitals are not prepared. When an Ebola outbreak in West Africa became a global concern in 2014, health advisers were alarmed at the length of time it took to properly diagnose infected people. In rural areas in Liberia, for example, blood samples from ailing people would be sent to a laboratory for testing, but the closest lab was hundreds of miles away through difficult and sometimes impassable roads. In more urban areas, blood samples would be sent to nearby labs, but those labs were often already overburdened by the sheer volume of samples to test. Staff at some treatment centers were unaware that a lab a little farther away might have the capacity to take in more samples. Meanwhile, undiagnosed infected people were unknowingly spreading the disease to many others around them, worsening the outbreak. The U.S. Defense Threat Reduction Agency (DTRA) and Centers for Disease Control and Prevention (CDC) posed a serious question: how do we improve blood-sample transportation routes in Liberia to ensure that samples taken from ill people are tested as quickly as possible, ensuring a proper diagnosis and faster treatment? Sandia scientists, already experts in transportation modeling for nuclear materials, quickly swarmed on this problem. The Sandia Ebola response team immediately set out to collect data from the region using available maps and local information, and transformed the raw data to GIS maps. Then, applying Sandia transportation routing algorithms, the team identified the optimal routes to get blood samples to the best laboratory for testing, even if that lab was not geographically the closest. The models also showed the best possible locations for mobile diagnostic laboratories that would better support the very rural regions that were most affected by the Ebola outbreak.

59 BASIC BIOLOGICAL SCIENCES↗

Development of direct injection/ionization mass spectrometry methods for whole molecule characterization

Determining uranium isotopic and concentration information from environmental samples typically involves extensive chemical and physical processing prior to analysis. Harsh sample preparation results in the loss of the original uranium chemical speciation (i.e. what the uranium was bonded to/with when found in the environment) as well as the mixing of anthropogenic uranium with background material contained within the collection media (e.g. a swipe or soil). The objective of this work is to adapt a bioanalytical mass spectrometry technology called paper spray ionization mass spectrometry for the rapid analysis of intact uranium complexes. Soft ionization facilitates detection of whole molecule uranyl complexes including uranyl acetate, uranyl nitrate, and uranyl-tributylphosphate complex. Cotton swipe samples doped with a multi-element standard containing μg levels of U, Bi, Pb, Cd, Fe, and Zn were directly analyzed without purification, representing a major improvement over existing methods. Uranium quantitation is demonstrated using internal standards to obtain linear calibration curves. Limits of detection were determined to be approximately 100 ng for UO 2 and uranyl acetate through measurement of ppb level solutions. The development and qualification of PSI-MS techniques could lead to significant safeguards-related cost reduction and timeliness by facilitating the triage and queueing of swipe samples for more sensitive and time-consuming analyses.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

ATDM ASD report for ECP October 2018

In October the team merged in updated ATDM/Trilinos configuration to include SPARC requirements. Assisted and worked on issues identified by the EMPIRE switchover to the ATDM/Trilinos configuration. Progress was made on automating dashboard triaging. Discovered and began addressing issues with mixed language calling with gcc-7.2 on Power8. Worked on new Python tool to filter CDASH reports to only show new issues. Completed ECP ST review. In October the team put an algorithm in place to prevent inverted elements in SPARC during refinement and worked on tests to morph mesher and should be ready for SGM integration soon. The team worked on solver rebalance and corrected issues. Complete SIMD work. Worked out next steps for solver improvements for EMPIRE. Adjusted some solver settings and to improve performance; strong scaling curves are flat instead of ascending etc. Worked on optimizing kernels for SPARC. Completed ECP ST reviews. The team worked on cleaning up branch for merge into SPARC master dev branch. Progress was made building scripts for catalyst builds on all HPC platforms of interest. Worked on adding TuckerMPl reader as plugin for catalyst. Completed ECP project review. Work has continued on NimbleSM, which now runs in a container and can be used modularly with an MPI code. The team also made progress on a qthreads version of NibleSM. Worked on build system issues within NimbleSM and Sierra for GPUs. Progressed on getting kookfied material models in NimbleSM. The team incorporated panel feedback form ECP project reviews into FY19 plans.

97 MATHEMATICS AND COMPUTING↗

Radiation Signatures of Potential Nuclear Threats

This report gives a brief overview of the DOE Triage and JTOT programs, gamma and neutron signatures in select measurements, software demos of FRAM and PeakEasy, and discussions of GADRAS as an analysis tool.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Information Theoretic Measures for Visual Analytics: The Silver Ticket?

In the context of text-based analysis workflows, we propose that an effective analytic tool facilitates triage by a) enabling users to identify and set aside irrelevant content (i.e., reduce the complexity of information in a dataset) and b) develop a working mental model of which items are most relevant to the question at hand. This LDRD funded research developed a dataset that is enabling this team to evaluate propose normalized compression distance (NCD) as a task, user, and context-insensitive measure of categorization outcomes (Shannon entropy is reduced as order is imposed). Effective analytics tools help people impose order, reducing complexity in measurable ways. Our concept and research was documented in a paper accepted to the ACM conference "Beyond Time and Error: Novel Methods in Information Visualization Evaluation", part of the IEEE VisWeek Conference, Baltimore, MD, October 16-21, 2016. The paper is included as an appendix to this report.

97 MATHEMATICS AND COMPUTING↗

Study of Neutron-Induced Stable and Radioactive Nuclides in a Post Detonation Urban Environment

In the event of a nuclear detonation in an urban environment, response time for triage by first responders, and forensic sample collection are of the utmost importance. When it comes to response planning, decision makers within the government need to have the most up-to-date information regarding several quantities of interest so that the maximum amount of lives can be saved. Quantities of interest in a post-detonation scenario include the spatial distribution of neutron-induced stable and radioactive isotopes in the environment, fallout patterns, blast and re damage zones [1]. The UMPRINDER toolkit is developed to calculate the prompt neutron-induced stable and radioactive isotopes in the surrounding environment in a nuclear forensics post-detonation scenario. The distribution of these isotopes in the environment can be used to provide guidance in determining best routes for first responders in order to minimize dose, debris sample collection routes for subsequent radiochemical analysis, and provide initial radionuclide inventories to fallout codes in order to improve fallout zone fidelity. Other methods have approached isotope transmutation on unstructured mesh for the fusion community concerning shutdown dose rates associated with fusion reactors. UMPRINDER is the first method to be focused on calculating some of the quantities of interest for the nuclear forensics and weapon effects communities.

61 RADIATION PROTECTION AND DOSIMETRY↗

A Handheld Medical Diagnostic Device for Harsh Environments

Medical diagnostic capabilities for extreme environments, are currently limited in nature to single marker type assays. We propose to develop a handheld device for medical diagnostics in extreme environments that provide sensitive and specific detection of biomarkers with an emphasis initially on radiation exposure. Such a device will have multiple uses, and will be easily adaptable to many applications. For example, first responders, the battlefield, in low resource settings in developing countries facing emerging disease outbreaks, and during long-duration space flights. To this end, we will develop highly adaptable microfluidic devices (cards) for profiling different biomarkers with an emphasis on those related to radiation exposure. We will leverage the previous centrifugal separator work from LLNL and Sandia National Laboratory. The radiation exposure biomarker work at LLNL will provide a biological platform for demonstrating the utility of the device. We will develop a fluidic system using a pump-less mechanical method (centrifugal) to move, control, order and layer fluids in the platform. This decreases complexity, while enabling simultaneous cell separation and plasma generation for two uses: the first is differential blood cell counts and the second is biomarker assay panels. This work will be accomplished in three Aims: Aim 1) Test multiplex microfluidic cards and integrated reader. Aim 2) Demonstrate system capabilities to take and process blood samples for multi-endpoint analysis. Aim 3) Test multiplex detection based on measuring differential blood cell counts, while measuring plasma protein biomarkers. The proposed work addresses the mission research challenge of chemical and biological countermeasure in that our work aims to provide new research capabilities to respond to man-made or natural outbreaks of pandemic diseases in particular in low resource and triage environments.

60 APPLIED LIFE SCIENCES↗

Development of Direct Injection/Ionization Mass Spectrometry Methods for Whole Molecule Characterization

The objective of this work is to adapt ambient ionization mass spectrometry (AMS) techniques for the rapid analysis of intact uranium complexes, stable strontium, cerium, and explosive compounds. The methods used were “soft ionization” techniques, which facilitate the detection of whole molecule complexes. The soft ionization mass spectrometry (MS) techniques that were investigated include paper spray ionization (PSI), matrix-assisted ionization (MAI), electrospray ionization (ESI) and direct analysis in real time (DART). For the first time, PSI-MS methods were successfully developed for whole molecule uranium-containing analytes (uranyl acetate, uranyl nitrate, and uranyl-tributylphosphate complexes). This was also the first demonstration of uranium complex detection and characterization and one of the few examples of inorganic analysis using MAI techniques. Proof of concept experiments also putatively identified matrix-derived ions and ion complexes that have not previously been described in the literature. Additionally, PSI-MS on cotton swipe samples doped with a multi-element standard containing μg levels of U, Bi, Pb, Cd, Fe, and Zn were directly analyzed without purification, representing a major improvement over existing methods. Both PSI and MAI methods demonstrated limits of detection (LODs) in the 10 - 100’s ng for various uranyl species within a range of 10’s ppm - 100’s ppb, dependent on analytical method and analyte species. AMS methods were also developed for other inorganics, including Ce and Sr, and organic explosive residues to address specific challenges in environmental monitoring and forensics. Further refinement and qualification of the AMS techniques developed within this effort would lead to significant cost reduction and timeliness by facilitating the triage and queueing of samples for subsequent more sensitive and time-consuming analyses.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Innovative mercury treatment technology options for the liquid waste system at the Savannah River Site: scoping studies

The Savannah River Site (SRS) Liquid Waste System (LWS) contains liquids, salts and sludges that are currently being processed into final wasteforms for disposition, specifically, waste glass for sludges, solids and liquids containing high levels of radioactivity, and saltstone grout for low activity decontaminated liquid solutions. The LWS also contains approximately 60,000 kg of mercury present in the following physical and chemical forms, specifically: a) ionic inorganic mercury, organomercury (e.g., methylmercury), and other minor components found in LWS fluids b) mercury solids such as oxides, hydroxides, amalgams sulfides and sorbed mercury, c) accumulations of dense liquid elemental mercury, and d) vapor phase elemental and organomercury mercury found in tank headspace gas and in evaporators. An effective and proactive management strategy of the mercury present in the LWS is needed to support processing of LWS wastes into glass and saltstone. Sustainable processing of the LAWS to completion requires mercury removal from the LWS at a rate of approximately 2,900 kg/yr. This removal can be accomplished through existing mercury treatment systems or newly implemented LWS “purge points”. The chemical speciation of mercury has emerged as the key factor that controls mercury behavior in the LWS. For example, past studies demonstrated that mercury speciation is adversely impacting the performance of existing removal systems so that significant levels of mercury are recycled from the Defense Waste Processing Facility (DWPF) back to the tank farm. Consequently, mercury concentrations have slowly increased in the LWS tank fluids over time. The presence of organo-mercury has also been identified as the cause of increased mercury leaching from saltstone. In response to these challenges, the Department of Energy (DOE) Office of Environmental Management (EM-TD) Technology Development Program has supported a series of scoping studies predicated on manipulating or controlling mercury speciation and mercury behaviors within the constraints of LWS waste chemistry and safety conditions. The intent of these studies was to rapidly triage potential technology options and develop a technically based go / no go recommendation for further work. This composite report presents the results of three scoping studies: 1) advanced photooxidation processes, 2) chemical reduction, and 3) mercury getters.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Improving the Nomenclature Around Uncertainty [Slides]

This presentation finds that defining the marginal probability density function (PDF) for nuclear data is important. Additionally, the vocabulary of “means and covariances” and new GNDS 2.0 formats are limited to Gaussian (normal) representations— always incorrect—but clearly of practical significance when uncertainties are large (>40%). Finally, the Triage Solution: declare our current data as containing best estimate (mode) plus variance for a truncated normal or lognormal.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗