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DOE OSTI2023

Identification of potent and selective N -myristoyltransferase inhibitors of Plasmodium vivax liver stage hypnozoites and schizonts

Drugs targeting multiple stages of the Plasmodium vivax life cycle are needed to reduce the health and economic burdens caused by malaria worldwide. N-myristoyltransferase (NMT) is an essential eukaryotic enzyme and a validated drug target for combating malaria. However, previous PvNMT inhibitors have failed due to their low selectivity over human NMTs. Herein, we apply a structure-guided hybridization approach combining chemical moieties of previously reported NMT inhibitors to develop the next generation of PvNMT inhibitors. A high-resolution crystal structure of PvNMT bound to a representative selective hybrid compound reveals a unique binding site architecture that includes a selective conformation of a key tyrosine residue. The hybridized compounds significantly decrease P. falciparum blood-stage parasite load and consistently exhibit dose-dependent inhibition of P. vivax liver stage schizonts and hypnozoites. Our data demonstrate that hybridized NMT inhibitors can be multistage antimalarials, targeting dormant and developing forms of liver and blood stage.

60 APPLIED LIFE SCIENCES↗

DOE OSTI2022

A multi-stage single photochrome system for controlled photoswitching responses

The ability of molecular photoswitches to convert on/off responses into large macroscale property change is fundamental to light-responsive materials. However, moving beyond simple binary responses necessitates the introduction of new elements that control the chemistry of the photoswitching process at the molecular scale. To achieve this goal, we designed, synthesized and developed a single photochrome, based on a modified donor–acceptor Stenhouse adduct (DASA), capable of independently addressing multiple molecular states. The multi-stage photoswitch enables complex switching phenomena. To demonstrate this, we show spatial control of the transformation of a three-stage photoswitch by tuning the population of intermediates along the multi-step reaction pathway of the DASAs without interfering with either the first or final stage. This allows for a photonic three-stage logic gate where the secondary wavelength solely negates the input of the primary wavelength. Finally, these results provide a new strategy to move beyond traditional on/off binary photochromic systems and enable the design of future molecular logic systems.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2025

Cooling performance of direct expansion system using multiple stages and adjustable heat exchange areas for fresh air handling

Providing fresh air to rooms can ensure indoor air quality. The direct expansion fresh air handling units are widely used, and most of them are single-stage treatment units, which are less energy-efficient under variable operating conditions. To overcome the shortcomings of existing systems, a direct expansion system using multiple stages and adjustable heat exchange areas for fresh air handling is proposed in this study. The fresh air is handled by coils stage by stage to achieve high efficiency, and the dampers of the idle coils are opened when some of the coils are working, which results in the performance improvement under partial load conditions. The simulation model is established, and operating conditions at load ratio of 95.70%, 45.38%, 31.76% and 0 are selected as typical operating conditions. The proposed system performances under different conditions are compared with traditional system. The results show that: (1) For four conditions, as the load rate decreases, the proposed system can save energy by 6.2%, 26.1%, 46.5%, and 25.0% compared to the traditional system respectively; (2) The proposed system can bypass the filter when the outdoor air is good, which can further save energy by 1.3%, 1.8%, 3.4%, and 25.9% under four conditions, respectively.

Zha, Fuhai↗

DOE OSTI2022

Survival estimates across five life stages of redfin ( Perca fluviatilis ) exposed to simulated pumped-storage hydropower stressors

The global prevalence of pumped-storage hydropower (PSH) is expected to grow exponentially as countries transition to renewable energy sources. Compared to conventional hydropower, little is currently known regarding PSH impacts on aquatic biota. This study estimated the survival of five life stages (egg, two larval stages, juvenile and adult) of redfin (European) perch (Perca fluviatilis) following passage through a PSH facility during the pumping phase. This was achieved by simulating the individual stressors expected to occur during passage through a 2000-MW PSH facility using laboratory-simulated (shear strain and extreme compression) and modelling (blade strike, BS) approaches. Our results indicate that redfin could survive the shear, pressure and BS stressors expected within the PSH facility, but impacts varied among life stages. Juvenile survival was >70% across all shear strain rates, while the survival of eggs and larvae declined markedly as strain rate increased. All life stages had high survival when exposed to rapid compression and BS. The high survival of redfin to the stressors tested suggests the PSH facility could facilitate the passage of redfin during the pumping phase from the lower to the higher elevation reservoir. This outcome would be welcomed in situations where the species is native, but could have adverse implications for the conservation of native biota where the species is considered a pest.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2024

Wide-Input Voltage Range Two-Stages Auxiliary Power Supply for Medium Voltage Applications

This paper aims to present a two-stages auxiliary power supply (APS) providing 24 V output over a wide input DC voltage range, from 600 V to 2 kV. In this architecture, the medium voltage to low voltage scale is addressed by a simplified DC transformer (DCX) stage while the low voltage tight regulation is proposed to be accomplished in a cascaded second stage. Such architecture provides a simpler approach to the industry for the design of APS in MV applications. The implementation of main building blocks of the APS including the DCX stage, startup circuit and self-powered circuit is described. Experimental results at 1400 V and 100 W are presented.

Magri Kimpara, Marcio↗

DOE OSTI2024

Three-Stage Adjusted Regression Forecasting for Software Defect Prediction

In this paper, a three-stage adjusted regression forecasting model is proposed to forecast the local regression model [6]. This is a growth curve approximation model that predicts the parameters for a future linear model based on a sliding window of previous linear models. The three stages of the model are as follows: • Initial fit: train regression models on a sliding window of the date and record model coefficients. • Prediction: fit new regression models to the coefficient lists and predict the value of the next coefficient. • Error correction: correct coefficient prediction error using the residual of the last point of the coefficient list and moving average. The resulting model from the multi-stage process is a forecast of the local regression model that represents the future window of data and is referred to as the predicted line. Results suggest the three-stage model demonstrates better prediction capability compared to existing solutions.

Pritchard, Shadow↗

DOE OSTI2022

1 kV, 10-kW SiC-Based Quadruple Active Bridge DCX Stage in a DC to Three-Phase AC Module for Medium-Voltage Grid Integration

Interfacing low voltage dc to medium voltage three-phase ac grid is often based on series-stackable modular converter architectures. To minimize energy storage requirements, it is advantageous to employ a quadruple active bridge (QAB) stage operating as a "dc transformer" in each stackable module. The QAB stage offers three isolated dc link voltages, which then allow for flexible stacking of three single-phase dc-to-ac inverter stages. Each of the module phases processes a pulsating power having a component at twice the line frequency. This presents a challenge in maintaining zero voltage switching (ZVS) on the secondary sides of the QAB during low-power portions of the line cycle. This article is focused on the design of the QAB stage. A detailed analysis of ZVS switching waveforms is presented, including effects of nonlinear device capacitances. It is shown how ZVS can be achieved at all times using a relatively small circulating current provided by the magnetizing inductance of the high-frequency transformer. Analytical expressions are given for the optimal values of the magnetizing inductance and the dead times of the QAB primary and secondary bridges. This approach is verified by experimental results on a 1 kV, 10-kW SiC-based prototype, demonstrating a relatively flat efficiency curve with a peak efficiency of 97.1% at 75% load.

24 POWER TRANSMISSION AND DISTRIBUTION↗

DOE OSTI2024

Design and validation of a cold load for characterization of cosmic microwave background stage 4 detectors

We present the design and validation of a variable temperature cryogenic blackbody source, hereinafter called a cold load, that will be used to characterize detectors to be deployed by cosmic microwave background stage 4 (CMB-S4), the next-generation ground-based cosmic microwave background (CMB) experiment. Although cold loads have been used for detector characterization by previous CMB experiments, this cold load has three innovative design features: (1) the ability to operate from the 1-K stage of a dilution refrigerator (DR), (2) a He3 gas-gap heat switch to reduce cooling time, and (3) the ability to couple small external optical signals to measure detector optical time constants under low optical loading. The efficacy of this design was validated using a 150-GHz detector array previously deployed by the Spider experiment. Thermal tests showed that the cold load can be heated to temperatures required for characterizing CMB-S4’s detectors without significantly impacting the temperatures of other cryogenic stages when mounted to the DR’s 1-K stage. In addition, optical tests demonstrated that external signals can be coupled to a detector array through the cold load without imparting a significant optical load on the detectors, which will enable measurements of the CMB-S4 detectors’ optical time constants.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

DOE OSTI2020

The Importance of Convective Stage on Out-of-Cloud Convectively Induced Turbulence from High-Resolution Simulations

Turbulence (clear-air, mountain wave, convectively induced) is an aviation hazard that is a challenge to forecast due to the coarse resolution ultilized in operational weather models. Turbulence indices are commonly used to aid pilots in avoiding turbulence, but these indices have been designed and calibrated for midlatitude clear-air turbulence prediction (e.g., the Ellrod index). A significant limitation with current convectively induced turbulence (CIT) prediction is the lack of storm stage dependency. In this study, six high-resolution simulations of tropical oceanic and midlatitude continental convection are performed to characterize the turbulent environment near various convective types during the developing and mature stages. Second-order structure functions, a diagnostic commonly used to identify turbulence in turbulence prediction systems, are used to characterize the probability of turbulence for various convective types. Turbulence likelihood was found to be independent of region (i.e., tropical vs midlatitude) but dependent on convective stage. The probability of turbulence increased near developing convection for the majority of cases. Additional analysis of static stability and vertical wind shear, indicators of turbulence potential, showed that the convective environment near developing convection was more favorable for turbulence production than mature convection. Near developing convection, static stability decreased and vertical wind shear increased. Vertical wind shear near mature and developing convection was found to be weakly correlated to turbulence intensity in both the tropics and the midlatitudes. Finally, this study emphasizes the need for turbulence avoidance guidelines for the aviation community that are dependent on convective stage.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2024

MULTI-LEADER: MULTI-source LEarning-Accelerated Design of high-Efficiency multi-stage compRessor (Final Technical Report)

The objective of MULTI-LEADER is to cut design costs by 80% while generating more energy-efficient designs of multi-stage compressors by developing and implementing novel machine learning (ML) techniques, which enable faster and fewer design iterations, improved solver performance, and concurrent multi-disciplinary design. Current industrial practices for the design of multi-stage compressors involve simulation-based design optimization with successive levels of model fidelity, iteratively evaluated between distinct disciplines, one stage at a time to tackle the high dimensional design variations. This project addresses these key design challenges: (1) concurrent optimization of multiple stages under many non-linear constraints; (2) multitude of evaluation of high-fidelity and expensive solvers and their gradients during optimization convergence in high-dimensional design; (3) multi-disciplinary design to maximize aerodynamic performance while guaranteeing structural integrity and additive manufacturability; (4) utilization of multiple fidelity of solvers with disparate parameterization and modeling assumptions. MULTI-LEADER achieved more than 5x speed up in detailed design of more energy-efficient compressors via these machine learning (ML) innovations: (i) rapid design surrogates by multi-source learning from diverse fidelities across multiple disciplines, (ii) physics-constrained data-augmented modeling for improved empiricism, (iii) generative manifold embedding for high dimensional concurrent design without gradient information; (iv) budget-constrained fidelity-adaptive sampling towards fewer design iterations.

33 ADVANCED PROPULSION SYSTEMS↗

DOE OSTI2025

Early Stages in the Lifecycle of Polar Liquid-Bearing Clouds

Stratiform liquid-bearing clouds are ubiquitous over the polar regions, where they are predominantly mixed-phase. These polar clouds induce substantial radiative forcing on the surface and continuously modify the atmospheric thermodynamic budget, with direct implications for the polar ice pack resilience. However, the physical representation of these clouds is still a major challenge for climate models. A significant part of polar liquid-bearing cloud lifecycle is often manifested in a quasi-steady self-sustaining, persistent, and turbulent state, which is driven by longwave cloud radiative cooling and can last for multiple days. This self-sustaining cloud lifecycle stage has been thoroughly investigated in numerous studies, though some of its aspects such as precipitation still lack robust quantification and evaluation. The preceding cloud lifecycle stages, which may last up to several hours, have nonetheless remained widely overlooked. These preceding stages initiate at cloud formation, often in a stable and non-turbulent atmospheric layer and serve as a key junction between cloud persistence and cloud dissipation. These two contrasting cloud lifecycle trajectories pose the question if general circulation models (GCMs) can capture the full lifecycle accurately for the real physical reasons, a necessary condition to improve our confidence in climate projections given the changing polar climate. The purpose of this project was to improve the characterization and understanding of these early stages in the lifecycle of polar stratiform liquid-bearing cloud and to aid their representation in GCMs. This research relied on measurements from the Multidisciplinary drifting Observatory for the Study of Arctic Climate (MOSAiC) field campaign, as well as the observations from the ARM West Antarctic Radiation Experiment (AWARE) and the permanent ARM site at Utqiagvik, North Slope of Alaska (NSA).

58 GEOSCIENCES↗

DOE OSTI2022

Life-Cycle and Techno-Economic Assessment of Early-Stage Carbon Capture and Utilization Technologies—A Discussion of Current Challenges and Best Practices

The mitigation of climate change requires research, development, and deployment of new technologies that are not only economically viable but also environmentally benign. Systematic and continuous technology assessment from early technology maturity onwards allows assessment practitioners to identify economic and environmental characteristics. With this information, decision-makers can focus time and resources on the most promising technologies. A broad toolset for technology assessment exists—stretching from the well-established life cycle assessment (LCA) methodology to more loosely defined techno-economic analysis (TEA) methods and the increasingly popular principles of technology maturity assessment such as the concept of technology readiness levels (TRL). However, current technology assessment practice faces various challenges at early stages, resulting in a potential mismatch of study results and stakeholders' needs and an escalation of assessment effort. In this practice review, we outline current challenges in the interplay of LCA, TEA, and TRL and present best practices for assessing early-stage climate change mitigation technologies in the field of carbon capture and utilization (CCU). The findings help practitioners systematically identify the TRL of a technology and adapt technology assessment methodologies accordingly. We highlight the methodological challenges for practitioners when adapting the goal and scope, identifying benchmark technologies, creating a comprehensive inventory, comparing early stage to commercial stage, ensuring clarity of recommendations for decision-making under high uncertainty, and streamlining conventional LCA and TEA assessment approaches and provide actionable recommendations. Overall, this work contributes to identifying promising technologies faster and more systematically, accelerating the development of new technologies for climate change mitigation and beyond.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2022

Social Disparities of Pain and Pain Intensity Among Women Diagnosed With Early Stage Breast Cancer

Background: Breast cancer is one of the most commonly diagnosed cancers among women in the United States and pain is the most common side effect of breast cancer and its treatment. Yet, the relationships between social determinants of pain and pain experience/intensity remain under-investigated. We examined the associations between social determinants of pain both at the individual level and the neighborhood level to understand how social conditions are associated with pain perception among early stage breast cancer patients. Methods: We conducted integrated statistical analysis of 1,191 women with early stage breast cancer treated at a large cancer center in Memphis, Tennessee. Combining electronic health records, patient-reported data and census data regarding residential address at the time of first diagnosis, we evaluated the relationships between social determinants and pain perception. Pain responses were self-reported by a patient as a numerical rating scale score at the patient’s initial diagnosis and follow-up clinical visits. We implemented two sets of statistical analyses of the zero-inflated Poisson model and estimated the associations between neighborhood poverty prevalence and breast cancer pain intensity. After adjustment for demographic characteristics, cancer stage, and chemotherapy, pain perception was significantly associated with poverty and blight level of the neighborhood. Results: Among women living in the highest-poverty areas, the odds of reporting pain were 2.48 times higher than those in the lowest-poverty area. Women living in the highest-blight area had 5.43 times higher odds of reporting pain than those in the lowest-blight area. Neighborhood-level social determinants were significantly associated with pain intensity among women diagnosed with early-stage breast cancer. Conclusions: Distressed neighborhood conditions are significantly associated with higher pain perception. Breast cancer patients living in socio-economically disadvantaged neighborhoods and in poor environmental conditions reported higher pain severity compared to patients from less distressed neighborhoods. Therefore, post-diagnosis pain treatment design needs to be tailored to the social determinants of the breast cancer patients.

60 APPLIED LIFE SCIENCES↗

DOE OSTI2022

Cloud Type and Life Stage Dependency of Liquid–Ice Mass Partitioning in Mixed-Phase Clouds

This paper analyzes the temperature, cloud type, and life stage dependencies of phase partitioning in mixed-phase clouds spanning tropics, midlatitudes, and the Arctic, using data from ground-based remote sensing measurements in Alaska and aircraft measurements from three field campaigns. The results show: (1) The liquid fraction in Arctic stratiform clouds decreased from 1 to 0.6 between 0 °C and −30 °C and was lower in spring because of the higher dust occurrence in Barrow, Alaska; (2) In wintertime orographic clouds, the liquid fraction was greater than 0.8; (3) Phase partitioning in convective clouds varied significantly with life stages. In the developing stage, it decreased from 1 to 0.3 between −5 °C and −15 °C, indicating rapid ice generation, while at the mature and dissipating stages, the liquid fractions were lower; (4) The stratiform regions of mesoscale convective systems were dominated by ice, with liquid fractions lower than 0.2; and (5) The variability of phase partitioning varied for different cloud types. In stratiform clouds, liquid dominated at warm temperatures. As the temperature decreased, an ice-dominated region was more frequently observed, while the occurrence of the mixed-phase region remained low. For convective clouds, the variability of phase partitioning was controlled by continuous glaciation with decreasing temperature and life cycle.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2022

Two-Stage Gauss-Seidel Preconditioners and Smoothers for Krylov Solvers on a GPU Cluster: Preprint

Gauss-Seidel (GS) relaxation is often employed as a preconditioner for a Krylov solver or as a smoother for Algebraic Multigrid (AMG). However, the requisite sparse triangular solve is difficult to parallelize on many-core architectures such as graphics processing units (GPUs). In the present study, the performance of the sequential GS relaxation based on a triangular solve is compared with two-stage variants, replacing the direct triangular solve with a fixed number of inner Jacobi-Richardson (JR) iterations. When a small number of inner iterations is sufficient to maintain the Krylov convergence rate, the two-stage GS (GS2) often outperforms the sequential algorithm on many-core architectures. The GS2 algorithm is also compared with JR. When they perform the same number of ops for SpMV (e.g. three JR sweeps compared to two GS sweeps with one inner JR sweep), the GS2 iterations, and the Krylov solver preconditioned with GS2, may converge faster than the JR iterations. Moreover, for some problems (e.g. elasticity), it was found that JR may diverge with a damping factor of one, whereas two-stage GS may improve the convergence with more inner iterations. Finally, to study the performance of the two-stage smoother and preconditioner for a practical problem, these were applied to incompressible uid ow simulations on GPUs.

algebraic multigrid↗

DOE OSTI2024

Developing and Evaluating Energy Justice Metrics for Early-Stage Materials Research

Materials science is a central component of early-stage research and development of virtually all clean energy technologies. But as much as material breakthroughs often hold the key to high efficiencies, long lifetimes, and high stability in eventual devices, early-stage choices about material types, structures, and processing can also serve to lock in long-term social and equity impacts of deployed energy technologies. Thus, to achieve a just and sustainable energy transition, tools to assess the energy justice impacts of early-stage materials research are critical. Here, we discuss development of the Justice Underpinning Science and Technology Research (JUST-R) metrics framework - a suite of metrics targeted at early-stage researchers to assess energy justice considerations in their work. The framework is evaluated for its appeal to researchers and effectiveness at promoting integration of energy justice into research through case studies, which reveal its ability to broaden researcher perspectives and key avenues for future improvement.

energy justice↗

DOE OSTI2022

MPC solution for optimal load shifting for buildings with ON/OFF staged packaged units: Experimental demonstration, and lessons learned

Small and medium-sized commercial buildings (SMCB) are significant demand response resources, and it is important to develop grid-responsive control algorithms that exploit those resources and create financial benefits for building owners and HVAC service providers. Furthermore, unlike large-sized commercial buildings, there is an opportunity to have universally applicable control solutions for many SMCBs since those buildings have a consistent HVAC system configuration: SMCBs are commonly served by multiple-staged air conditioning units controlled by their own thermostats. Despite the demand response potential and scalability, however, very few control solutions are available for SMCBs. Typical model predictive control (MPC) and heuristic control approaches for cooling load shifting that lower thermostat setpoints before an electric price jump are suitable mainly for large-sized commercial buildings where a continuous capacity modulation is possible, e.g., via dampers in variable air volume terminal units. However, those approaches can cause undesired, high peaks for SMCBs due to the nature of ON/OFF unit staging and narrow thermostat deadbands. This could discourage the use of advanced grid-responsive controls for SMCBs due to the concern of high demand charges, and has to be resolved. This paper presents a MPC solution that overcomes this challenge. It has a hierarchical MPC structure where an upper level MPC is responsible for electrical load shifting in response to an electric price signal while a lower level MPC is responsible for coordinating compressor stages to eliminate unnecessary peaks and follows the setpoints determined by the upper level MPC. In this work, two one-month, comprehensive laboratory tests have been carried out to demonstrate load shifting and cost savings for the algorithm. Interesting trade-offs between energy efficiency and load flexibility were observed and are discussed, and lessons learned for applying MPCs for SMCBs are also presented.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

DOE OSTI2025

The Staged, Pressurized Oxy-Combustion Technology: Status and Application to Boiler Retrofits to Yield Carbon-Negative Power via Biomass

Recognizing the benefits of pressurization and fuel staging on the efficiency of oxy-combustion, the staged, pressurized oxy-combustion (SPOC) process was introduced in 2012. The combination of fuel staging and pressurized oxy-combustion results in a more compact plant, a higher plant efficiency and reduced costs for pollutant and greenhouse gas removal compared with plants equipped with conventional carbon capture. This approach to power generation enables a modular boiler design and optimizes the plant for flexible operation, which is essential to meet the demands of the modern grid when it contains intermittent power sources. Originally designed to burn coal, the SPOC process is well-suited for biomass because the combustion of biomass leads to a high moisture content in the flue gas and the SPOC process is able to recover the latent heat of this moisture, enhancing system performance over that of traditional biomass combustion at atmospheric pressure. The present work is focused on evaluating the potential for utilizing the SPOC process in retrofit applications wherein the boilers of an existing plant are replaced with the SPOC process, and woody biomass is used as the fuel to yield carbon-negative power. Two applications are considered: power generation and cogeneration (heat and power). Modeling these systems in Aspen Plus demonstrates that the SPOC process surpasses the performance of baseline plants with post-combustion capture (PCC) for both power generation and cogeneration. Specifically, compared to a PCC equipped plant, the SPOC power plant has 33% higher efficiency, and the SPOC cogeneration plant reaches 42% higher net energy. Experimentally, the existing SPOC facility was fired for the first time with 100% biomass and after minor improvements were made to the feeding system, the facility demonstrated excellent performance during startup, steady-state operation and turndown.

Carbon capture and storage↗