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At least 91 records · Page 5

Epidermal growth factor receptor cascade prioritizes the maximization of signal transduction

Many studies have been performed to quantify cell signaling. Cell signaling molecules are phosphorylated in response to extracellular stimuli, with the phosphorylation sequence forming a signal cascade. The information gain during a signal event is given by the logarithm of the phosphorylation molecule ratio. The average information gain can be regarded as the signal transduction quantity (ST), which is identical to the Kullback–Leibler divergence (KLD), a relative entropy. We previously reported that if the total ST value in a given signal cascade is maximized, the ST rate (STR) of each signaling molecule per signal duration (min) approaches a constant value. To experimentally verify this theoretical conclusion, we measured the STR of the epidermal growth factor (EGF)-related cascade in A431 skin cancer cells following stimulation with EGF using antibody microarrays against phosphorylated signal molecules. The results were consistent with those from the theoretical analysis. Thus, signaling transduction systems may adopt a strategy that prioritizes the maximization of ST. Furthermore, signal molecules with similar STRs may form a signal cascade. In conclusion, ST and STR are promising properties for quantitative analysis of signal transduction.

59 BASIC BIOLOGICAL SCIENCES↗

Metal oxide supported Ni-impregnated bifunctional catalysts for controlling char formation and maximizing energy recovery during catalytic hydrothermal liquefaction of food waste

Nickel (Ni)-impregnated metal oxide catalysts, Ni/CeZrO x , Ni/ZrO 2 , and Ni/CeO 2 , were investigated to maximize energy recovery and reduce char yield during catalytic hydrothermal liquefaction (CHTL) of food waste. Yields of char, biocrude, water soluble products, and gas were measured at 300 °C and 1 hour for both the parent oxides (CeZrO x , ZrO 2 , and CeO 2 ) and the Ni-impregnated versions. Using Ni-based catalysts reduced the carbon-weighted char yield from 16–24% to <10% and decreased the energy recovery of char from 39–47% to <21%, as compared with control tests. In particular, using Ni/ZrO 2 resulted in the greatest biocrude yield, greatest reduction of char yield, and greatest energy recovered as biocrude (39.2%). After factoring in all forms of usable energy produced from food waste, the total energy recovery obtained for the catalysts studied here was >60%. Ni/ZrO 2 and Ni/CeO 2 show the greatest potential for controlling char growth and maximizing energy recovered from food waste. The crystalline structures of all three oxides were hydrothermally stable. Catalyst reuse tests indicate that the biocrude and char yields remained the same for the first and second use (within uncertainty) and that the catalyst retains its initial crystallinity and 93% of its initial Ni content. Molecular composition of biocrudes analyzed by the state-of-the-art analytical platforms (including GC-MS, GC × GC, FT-ICR MS, and 1H NMR) revealed minor differences in the chemical constituents of biocrudes obtained using different catalysts and provided some insight regarding reaction mechanism.

09 BIOMASS FUELS↗

Variational approach to quantum state tomography based on maximal entropy formalism

Quantum state tomography is an integral part of quantum computation and offers the starting point for the validation of various quantum devices. One of the central tasks in the field of state tomography is to reconstruct, with high fidelity, the quantum states of a quantum system. From an experiment on a real quantum device, one can obtain the mean measurement values of different operators. With such data as input, in this report we employ the maximal entropy formalism to construct the least biased mixed quantum state that is consistent with the given set of expectation values. Even though, in principle, the reported formalism is quite general and should work for an arbitrary set of observables, in practice we shall demonstrate the efficacy of the algorithm on an informationally complete (IC) set of Hermitian operators. Such a set possesses the advantage of uniquely specifying a single quantum state from which the experimental measurements have been sampled and hence renders the rare opportunity not only to construct a least-biased quantum state but even replicate the exact state prepared experimentally within a preset tolerance. Here, the primary workhorse of the algorithm is reconstructing an energy function which we designate as the effective Hamiltonian of the system, and parameterizing it with Lagrange multipliers, according to the formalism of maximal entropy. These parameters are thereafter optimized variationally so that the reconstructed quantum state of the system converges to the true quantum state within an error threshold. To this end, we employ a parameterized quantum circuit and a hybrid quantum-classical variational algorithm to obtain such a target state, making our recipe easily implementable on a near-term quantum device.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Maximal Cherenkov γ-radiation on Fermi-surface of compact stars

The quantum magnetohydrodynamic model is employed in this paper to study the extraordinary (XO) elliptically polarized electromagnetic wave dispersion in quantum plasmas with spin-1/2 magnetization and relativistic degeneracy effects, considering also the electron-exchange and quantum diffraction of electrons. From the lower and upper calculated XO-modes, it is observed that, for electrons on the surface of the Fermi-sphere, the lower XO-mode can excite the Cherenkov radiation by crossing the Fermi-line, with some proper conditions depending on the values of independent plasma parameters, such as the relativistic-degeneracy, the atomic-number of constituent ions, and the magnetic field strength. Particularly, a lower electron number-density and Cherenkov radiation frequency limits are found to exist, for instance, for given values of the plasma ions atomic-number and the magnetic field strength below which the radiation can not be excited by the electrons on the Fermi-surface. This lower density limit increases by decrease in the atomic-number but decreases with decrease in the strength of the ambient magnetic field. It is remarkable that in this research it is discovered that the maximal Cherenkov-radiation per unit-length (the energy radiated by superluminal electrons traveling through the dielectric medium) coincides with the plasma number-densities, which is present in compact stars with the maximal radiation frequency lying in the gamma-ray spectrum. Current study can provide an important plasma diagnostic tool for a wide plasma density range, be it the solid density, the warm dense matter, the inertial confined or the astrophysical compact plasmas and may reveal an important cooling mechanism for white dwarfs. Current findings may also answer the fundamental astrophysical question on the mysterious origin of intense cosmic gamma-ray emissions.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Image reconstruction of single photon emission computed tomography (SPECT) on a pebble bed reactor (PBR) using expectation maximization and exact inversion algorithms: Comparison study by means of numerical phantom

Single Photon Emission Computed Tomography (SPECT) is a well-known imaging technique used in medical application, and it is part of medical imaging modalities that made the diagnosis and treatment of disease possible. However, SPECT technique is not only limited to the medical sector. Many works are carried out to adapt the same concept by using high-energy photon emission to diagnose process malfunctions in critical industrial systems such as in chemical reaction engineering research laboratories, as well as in oil and gas, petrochemical and petrochemical refining industries. Motivated by vast applications of SPECT technique, this work attempts to study the application of SPECT on a Pebble Bed Reactor (PBR) using numerical phantom of pebbles inside the PBR core. From the cross-sectional images obtained from SPECT, the behavior of pebbles inside the core can be analyzed for further improvement of the PBR design. As the quality of the reconstructed image is largely dependent on the algorithm used, this work aims to compare two image reconstruction algorithms for SPECT, namely the Expectation Maximization Algorithm and the Exact Inversion Formula. The results obtained from the Exact Inversion Formula showed better image contrast and sharpness, and shorter computational time compared to the Expectation Maximization Algorithm.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

The maximally entangled set of 4-qubit states

Entanglement is a resource to overcome the natural restriction of operations used for state manipulation to Local Operations assisted by Classical Communication (LOCC). Hence, a bipartite maximally entangled state is a state which can be transformed deterministically into any other state via LOCC. In the multipartite setting no such state exists. There, rather a whole set, the Maximally Entangled Set of states (MES), which we recently introduced, is required. This set has on the one hand the property that any state outside of this set can be obtained via LOCC from one of the states within the set and on the other hand, no state in the set can be obtained from any other state via LOCC. Recently, we studied LOCC transformations among pure multipartite states and derived the MES for three and generic four qubit states. Here, we consider the non-generic four qubit states and analyze their properties regarding local transformations. As already the most coarse grained classification, due to Stochastic LOCC (SLOCC), of four qubit states is much richer than in case of three qubits, the investigation of possible LOCC transformations is correspondingly more difficult. We prove that most SLOCC classes show a similar behavior as the generic states, however we also identify here three classes with very distinct properties. The first consists of the GHZ and W class, where any state can be transformed into some other state non-trivially. In particular, there exists no isolation. On the other hand, there also exist classes where all states are isolated. Last but not least we identify an additional class of states, whose transformation properties differ drastically from all the other classes. Although the possibility of transforming states into local-unitary inequivalent states by LOCC turns out to be very rare, we identify those states (with exception of the latter class) which are in the MES and those, which can be obtained (transformed) non-trivially from (into) other states respectively. These investigations do not only identify the most relevant classes of states for LOCC entanglement manipulation, but also reveal new insight into the similarities and differences between separable and LOCC transformations and enable the investigation of LOCC transformations among arbitrary four qubit states.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

The structural information filtered features (SIFF) potential: Maximizing information stored in machine-learning descriptors for materials prediction

Machine learning inspired potentials continue to improve the ability for predicting structures of materials. However, many challenges still exist, particularly when calculating structures of disordered systems. These challenges are primarily due to the rapidly increasing dimensionality of the feature-vector space which in most machine-learning algorithms is dependent on the size of the structure. In this article, we present a feature-engineered approach that establishes a set of principles for representing potentials of physical structures (crystals, molecules, and clusters) in a feature space rather than a physically motivated space. Our goal in this work is to define guiding principles that optimize information storage of the physical parameters within the feature representations. In this manner, we focus on keeping the dimensionality of the feature space independent of the number of atoms in the structure. Our Structural Information Filtered Features (SIFF) potential represents structures by utilizing a feature vector of low-correlated descriptors, which correspondingly maximizes information within the descriptor. We present results of our SIFF potential on datasets composed of disordered (carbon and carbon–oxygen) clusters, molecules with C 7 O 2 H 2 stoichiometry in the GDB9-14B dataset, and crystal structures of the form (Al x Ga y In z ) 2 O 3 as proposed in the NOMAD Kaggle competition. Our potential's performance is at least comparable, sometimes significantly more accurate, and often more efficient than other well-known machine-learning potentials for structure prediction. However, primarily, we offer a different perspective on how researchers should consider opportunities in maximizing information storage for features.

36 MATERIALS SCIENCE↗

Simultaneous inference of equation of state parameters and unknown data errors with uncertainty quantification via hierarchical Bayesian posterior maximization

Equations of state (EOSs) are a key component in running hydrodynamic simulations as they relate the thermodynamic states for the material. The Davis reactants EOS is commonly used for modeling high explosives (HEs), and the EOS model parameters are calibrated using material specific data. The calibrations are often performed with uncertainty quantification via Bayesian inference to account for uncertainty in the data and generate ensembles of likely parameters. However, there are relatively few HE data sets to use for calibration and many are historical and lack error information. In this work, we simultaneously calibrate the Davis reactants EOS model parameters and unknown data error terms for the high explosive PBX 9501. To quantify the uncertainty in the models and the data, we use a Bayesian framework for the calibration and compute the hierarchical Bayesian posterior distribution with both a posteriori maximization approach and Markov Chain Monte Carlo. In general, we find that, given our assumptions, the two approaches result in similar calibrated parameters, posterior covariance matrices, and insights about the parameters but that the posterior maximization requires far less computational resources.

97 MATHEMATICS AND COMPUTING↗

Optimal deployment of resources for maximizing impact in spreading processes

Significance Spreading processes play an increasingly important role in marketing, opinion setting, and epidemic modeling. Most existing algorithms for optimal resource allocation in spreading processes are based on topological characteristics of the underlying network and aim to maximize impact at infinite time. Clearly, realistic and efficient real-time allocation policies should consider both network properties and details of the dynamics; additionally, control may be applied only to a restricted set of accessible nodes, and impact should be maximized in a limited time window. We introduce a probabilistic targeting framework that incorporates the dynamics and encompasses previously considered optimization formulations. It is based on a scalable dynamic message-passing approach that allows for the solution of large real-world network instances.

60 APPLIED LIFE SCIENCES↗

Maximizing the ExoEarth candidate yield from a future direct imaging mission

ExoEarth yield is a critical science metric for future exoplanet imaging missions. Here we estimate exoEarth candidate yield using single visit completeness for a variety of mission design and astrophysical parameters. We review the methods used in previous yield calculations and show that the method choice can significantly impact yield estimates as well as how the yield responds to mission parameters. We introduce a method, called Altruistic Yield Optimization, that optimizes the target list and exposure times to maximize mission yield, adapts maximally to changes in mission parameters, and increases exoEarth candidate yield by up to 100% compared to previous methods. We use Altruistic Yield Optimization to estimate exoEarth candidate yield for a large suite of mission and astrophysical parameters using single visit completeness. We find that exoEarth candidate yield is most sensitive to telescope diameter, followed by coronagraph inner working angle, followed by coronagraph contrast, and finally coronagraph contrast noise floor. We find a surprisingly weak dependence of exoEarth candidate yield on exozodi level. Additionally, we provide a quantitative approach to defining a yield goal for future exoEarth-imaging missions.

79 ASTRONOMY AND ASTROPHYSICS↗

Maximal temperature in a simple thermodynamical system

Temperature in a simple thermodynamical system is not limited from above. It is also widely believed that it does not make sense talking about temperatures higher than the Planck temperature in the absence of the full theory of quantum gravity. Here, we demonstrate that there exist a maximal achievable temperature in a system where particles obey the laws of quantum mechanics and classical gravity before we reach the realm of quantum gravity. Namely, if two particles with a given center of mass energy come at the distance shorter than the Schwarzschild diameter apart, according to classical gravity they will form a black hole. It is possible to calculate that a simple thermodynamical system will be dominated by black holes at a critical temperature which is about three times lower than the Planck temperature. That represents the maximal achievable temperature in a simple thermodynamical system.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Analysis of Power-Maximizing Region 2 Controllers for Wind and Marine Turbines

Wind and marine energy are rapidly growing and complementary technologies that share some techniques for simplified modeling and control, particularly in below-rated flow speeds. A turbine operator has several choices of controller for maximizing power in Region 2. The simple and ubiquitous KΩ 2 control law is often effective but limited in its flexibility. Alternative controllers use reference tracking to split the control objectives into a low-bandwidth optimal tip-speed ratio tracking loop to maximize steady-state power and a higher-bandwidth proportional-integral control loop to reject inflow turbulence. Several options exist for identifying the slowly varying optimal set point during operation, based on estimating the inflow velocity or filtering the power or torque signals. This study compares the trade-offs between performance and other design priorities for a few choices of reference-tracking controller in the literature for reference wind and marine turbines. Analysis is performed in the frequency domain using the linearization of each controller, and the impact of turbulent disturbances on the closed-loop system is described. The controllers are simulated in OpenFAST to analyze their performance with higher-order nonlinear turbine dynamics.

17 WIND ENERGY↗

Model-independent tuning for maximizing free electron laser pulse energy

The output power of a free electron laser (FEL) has extremely high variance even when all FEL parameter set points are held constant because of the stochastic nature of the self-amplified spontaneous emission (SASE) FEL process, drift of thousands of coupled parameters, such as thermal drifts, and uncertainty and time variation of the electron distribution coming off of the photo cathode and entering the accelerator. In this work, we demonstrate the application of automatic, model-independent feedback for the maximization of average pulse energy of the light produced by free electron lasers. We present experimental results from both the European x-ray free electron laser at DESY and from the Linac Coherent Light Source at SLAC. We demonstrate application of the technique on rf systems for automatically adjusting the longitudinal phase space of the beam, for adjusting the phase shifter gaps between the undulators, and for adjusting steering magnets between undulator sections to maximize the FEL output power. We show that we can tune up to 105 components simultaneously based only on noisy average bunch energy measurements.

47 OTHER INSTRUMENTATION↗

Maximally entangled gluons for any x

Individual quarks and gluons at small x inside an unpolarized hadron can be regarded as Bell states in which qubits in the spin and orbital angular momentum spaces are maximally entangled. Using the machinery of quantum information science, we generalize this observation to all values 0 < x <1 and describe gluons (but not quarks) as maximally entangled states between a qubit and a qudit. We introduce the conditional probability distribution P⁡(l z |s z ) of a gluon’s orbital angular momentum l z given its helicity s z . Restricting to the three states l z =0,±1, which constitute a qutrit, we explicitly compute P as a function of x.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Singularity Structure of Maximally Supersymmetric Scattering Amplitudes

We introduce here evidence that loop amplitudes in maximally supersymmetric ( N = 4 ) Yang-Mills theory (SYM) beyond the planar limit share some of the remarkable structures of the planar theory. In particular, we show that through two loops, the four-particle amplitude in full N = 4 SYM has only logarithmic singularities and is free of any poles at infinity—properties closely related to uniform transcendentality and the UV finiteness of the theory. Furthermore, we briefly comment on implications for maximal ( N = 8 ) supergravity theory (SUGRA).

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Optimal Iterative Method for Network Utility Maximization with Intertemporal Constraints

Network utility maximization (NUM) has been widely used to solve the optimal resource allocation problem in wireless network and power systems. The network planner aims to allocate generation and demand over producers and consumers such that social welfare is maximized while supply and demand are balanced, and network constraints such as branch capacity constraints are satisfied. However, when taking into account dynamics of agents, such as ramp rate constraints on power output for suppliers and impact of cumulative prior consumption on current demand for consumers, a single-period formulation is not sufficient. We propose an iterative method for the multi-period NUM with intertemporal constraints based on dual decomposition. It features a price iteration scheme that achieves optimal social welfare, and the algorithm is guaranteed to converge if proper concavity condition holds. We illustrate the iterative algorithm by power system examples. It is shown that similar to locational marginal price (LMP) in power systems, time-varying congestion prices arise when there exists binding branch constraints. Simulation results also demonstrate that there is increase in social welfare compared to a single-period formulation.

Ma, Ke↗

Maximizing the Radar Generalized Image Quality Equation for Bistatic SAR Using Waveform Frequency Agility

The radar generalized image quality equation (RGIQE) is a metric used to measure both monostatic and bistatic synthetic aperture radar (BSAR) image quality, it is a function of signal-to-noise ratio (SNR) and 2-D bandwidth. The 2-D bandwidth is equal to the area of the transfer function’s (TF) passband region. With the exception of side-looking monostatic geometries, almost all monostatic and bistatic geometries have skewed passband shapes when waveform frequency parameters remain unchanged from pulse to pulse. Most synthetic aperture radar (SAR) applications require a rectangular-shaped passband region, this is achieved by inscribing a rectangular region within the skewed intrinsic passband region. Increasing skewness results in less inscription area reducing 2-D bandwidth, image SNR, and thus RGIQE capacity. In this article, a waveform with frequency agility is used to rectify the skewness that degrades RGIQE capacity. By changing the waveform’s center frequency and instantaneous bandwidth from pulse to pulse in a particular manner, the intrinsic passband region can be de-skewed. The de-skewed shape maximizes the inscription area thus maximizing 2-D bandwidth, image SNR, and RGIQE capacity. Here, three examples are given in this article, one monostatic geometry, and two bistatic geometries. RGIQE capacity is increased by 52.02%, 44.42%, and 79.09% for the three examples.

47 OTHER INSTRUMENTATION↗

SU-C-207B-02: Maximal Noise Reduction Filter with Anatomical Structures Preservation

Purpose: All medical images contain noise, which can result in an undesirable appearance and can reduce the visibility of anatomical details. There are varieties of techniques utilized to reduce noise such as increasing the image acquisition time and using post-processing noise reduction algorithms. However, these techniques are increasing the imaging time and cost or reducing tissue contrast and effective spatial resolution which are useful diagnosis information. The three main focuses in this study are: 1) to develop a novel approach that can adaptively and maximally reduce noise while preserving valuable details of anatomical structures, 2) to evaluate the effectiveness of available noise reduction algorithms in comparison to the proposed algorithm, and 3) to demonstrate that the proposed noise reduction approach can be used clinically. Methods: To achieve a maximal noise reduction without destroying the anatomical details, the proposed approach automatically estimated the local image noise strength levels and detected the anatomical structures, i.e. tissue boundaries. Such information was used to adaptively adjust strength of the noise reduction filter. The proposed algorithm was tested on 34 repeating swine head datasets and 54 patients MRI and CT images. The performance was quantitatively evaluated by image quality metrics and manually validated for clinical usages by two radiation oncologists and one radiologist. Results: Qualitative measurements on repeated swine head images demonstrated that the proposed algorithm efficiently removed noise while preserving the structures and tissues boundaries. In comparisons, the proposed algorithm obtained competitive noise reduction performance and outperformed other filters in preserving anatomical structures. Assessments from the manual validation indicate that the proposed noise reduction algorithm is quite adequate for some clinical usages. Conclusion: According to both clinical evaluation (human expert ranking) and qualitative assessment, the proposed approach has superior noise reduction and anatomical structures preservation capabilities over existing noise removal methods. Senior Author Dr. Deshan Yang received research funding form ViewRay and Varian.

60 APPLIED LIFE SCIENCES↗