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At least 91 records · Page 5
All sourcesNASA NTRSDOE OSTI
DOE OSTI2022

Carcass appearance does not influence scavenger avoidance of carnivore carrion

Abstract The selection or avoidance of certain carrion resources by vertebrate scavengers can alter the flow of nutrients in ecosystems. Evidence suggests higher trophic level carrion is scavenged by fewer vertebrate species and persists longer when compared to lower trophic level carrion, although it is unclear how scavengers distinguish between carcasses of varying species. To investigate carnivore carrion avoidance and explore sensory recognition mechanisms in scavenging species, we investigated scavenger use of intact and altered (i.e., skin, head, and feet removed) coyote— Canis latrans (carnivore) and wild pig— Sus scrofa (omnivore) carcasses experimentally placed at the Savannah River Site, SC, USA. We predicted carnivore carcasses would persist longer due to conspecific and intraguild scavenger avoidance. Further, we hypothesized visually modifying carcasses would not reduce avoidance of carnivore carrion, given scavengers likely depend largely on chemical cues when assessing carrion resources. As expected, mammalian carnivores largely avoided scavenging on coyote carcasses, resulting in carnivore carcasses having longer depletion times than wild pig carcasses at intact and altered trials. Therefore, nutrients derived from carnivore carcasses are not as readily incorporated into higher trophic levels and scavengers largely depend on olfactory cues when assessing benefits and risks associated with varying carrion resources.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2023

White-tailed deer responses to acoustic predator cues are contingent upon past land use and contemporary fire regime

Prey can assess the immediate risk of predation by detecting cues of predator presence, and it is expected that prey should invest in costly antipredator behaviors when a cue of predator presence is detected. Features of the habitat in which the cue is detected, such as vegetative concealment, serve as indirect cues of risk and can mediate how prey respond to direct cues of predator presence. Past agricultural land use and contemporary fire regimes are common disturbances that may modify prey perceptions of risk and could, therefore, alter prey responses to direct cues of predator presence. Here we examined whether the overlap of these two disturbances affected white-tailed deer (Odocoileus virginianus) responses to cues of predator presence by measuring deer vigilance and foraging bout duration in response to coyote (Canis latrans) vocalizations across 20 woodlands that varied in past land use and contemporary fire regime. Frequent fire regimes consistently increased deer visibility to predators across both land-use history contexts. Deer exhibited no behavioral response to the predator cue in habitats containing infrequent fire regimes or agricultural legacies. Deer responded to the cue in frequently burned woodlands without agricultural legacies through increased vigilance and time spent at a foraging location. These findings reveal that land-use legacies and contemporary fire regimes can mediate how prey respond to direct cues of risk. They also suggest that prey may balance the uncertainty associated with cues of predation risk with the urgency of responding to a potential attack by being vigilant and remaining in place.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2020

Relative reproductive phenology and synchrony affect neonate survival in a nonprecocial ungulate

Abstract Degree of reproductive synchronization in prey is hypothesized as a predator defense strategy reducing prey risk via predator satiation or predator avoidance. Species with precocial young, especially those exposed to specialist predators, should be highly synchronous to satiate predators (predator satiation hypothesis), while prey with nonprecocial (i.e. altricial) young, especially those exposed to generalist predators, should become relatively asynchronous to avoid predator detection (predator avoidance hypothesis). The white‐tailed deer Odocoileus virginianus in North America is an example of a nonprecocial ungulate that uses the hider strategy early in life; its primary predator (coyote; Canis latrans ) is a generalist, making white‐tailed deer a good model species to test the predator avoidance hypothesis. We used birth dates and known fates of white‐tailed deer neonates ( n = 1,032) across nine study sites varying in relative synchrony and predator assemblages to test the predator avoidance hypothesis. We predicted that relative birthing asynchrony of the population would increase relative survival at the population level; therefore, at the individual scale, neonate birth date nearer to mean birthing date in a respective population would not influence individual survival. Coyotes were responsible for the majority of predation events, and survival of those neonates increased the closer the individual was born to peak birthing season in each respective population. Also, at the population level, reproductive asynchronization negatively affected survival. Contrary to the predator avoidance hypothesis, our data indicate patterns in neonate survival for white‐tailed deer better support the predator satiation hypothesis at the individual and population level. Additionally, coyotes may present a selective force great enough to shift reproductive synchrony such that predator satiation may become a feasible defense strategy for neonates at local spatial scales. Our results indicate that synchronizing reproduction may still be the most effective strategy to reduce individual predation risk from generalist predators, particularly when the window of heightened resource availability to the prey is narrow. A free Plain Language Summary can be found within the Supporting Information of this article.

Michel, Eric S.↗
DOE OSTI2023

Assessing springtime vertebrate prey of sympatric mesopredators in the southeastern United States using metabarcoding analysis

Coyotes (Canis latrans) colonized the eastern United States over the last century and formed a 3-species predator guild with bobcats (Lynx rufus) and gray foxes (Urocyon cinereoargenteus) across much of the southeastern United States. Diets among the three species vary along with respective impacts on game species such as white-tailed deer (Odocoileus virginianus) and wild turkeys (Meleagris gallopavo). To determine predation impacts on vertebrate prey and dietary overlap in consumption of prey items, we assessed diets of coyote, bobcat, and gray fox during spring, coinciding with white-tailed deer fawning and wild turkey nesting and brood rearing. We sampled across three sites along the Savannah River in South Carolina from mid-May through mid-June of 2020–2021. We collected 180 scat samples along 295.9 kilometers (71.1–122.4 km/site) of unpaved secondary roads and used DNA metabarcoding to determine vertebrate diet items. We identified predator species of scat using DNA metabarcoding and species-specific mtDNA fragment analysis (153 were coyote, 20 bobcat, and seven gray fox). Overall, we found evidence that two species, coyote and bobcat, consumed deer while all three consumed turkeys. Frequency of deer in the diet varied across sites for coyotes from 62–86% and wild turkey was present with a frequency of occurrence of 9% for coyotes, 5% for bobcats, and 14% for gray fox. Vertebrate diet specialization was evident across predator species with high frequency of deer in coyote diets, rabbits and small mammals in bobcat diets, and herpetofauna in gray fox diets. During deer fawning and wild turkey nesting and brood rearing, dietary overlap appears to be mediated by disparate selection of prey items, which reduced competition among coyotes, bobcats, and gray foxes. Use of DNA metabarcoding may augment our understanding of dietary preferences within this predator guild by providing increased resolution of diet composition among important game species.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

Site-wide occupancy assessment using camera traps for seven mammalian species at Los Alamos National Laboratory

Los Alamos National Laboratory (LANL or Laboratory) is committed to solving national security challenges through scientific excellence and has been serving the nation and northern New Mexico for over 70 years. Being located on the Pajarito Plateau in the eastern flanks of the Jemez Mountains, the Laboratory is surrounded by a rich diversity of plants and animals. It is common to see many different species of wildlife on Laboratory property; however, sometimes interactions with wildlife can be negative. Vehicle accidents with wildlife have become a common occurrence. With the current and ongoing expansion of the Laboratory on the Pajarito Plateau, it has the potential to further impact wildlife movement including large game species. Local agencies and tribal Pueblos rely on large game species and do not want these species to be restricted from moving across property boundaries. Temporal and spatial aspects of where wildlife occur on the site is a phenomena that is either not well understood in uncommon species or needs periodic reevaluation for common species. Estimating the distribution of multiple species across the landscape provides wildlife biologists with crucial information for monitoring and conserving animal populations in a particular area. Utilizing motion activated wildlife cameras, also known as camera traps, to monitor wildlife populations has become an essential tool for biologists. Camera traps are non-invasive and cost-effective and can document multiple elusive or uncommon wildlife species, such as carnivores, simultaneously. Occupancy modeling provides a flexible framework for the analysis of the distribution for multiple wildlife species. It explicitly recognizes whether a species is spatially common or rare (occupancy = ψ) and if that species is easy or hard to detect (detection probability = p ). Multispecies and multi-season occupancy models can detect trends in species occupancy because individual species may vary in seasonal movements, detection probability, and transition rates between habitats. In this study, we assessed the site as a whole to ascertain when and where medium and large mammal species are present. Understanding wildlife patterns at the Laboratory will better inform future management decisions regarding land use and development strategies. We placed motion activated wildlife cameras in a random systematic sampling design and used these data to create occupancy models. We tested for differences in single-species occupancy and detection probability by season of mammal species captured on 20 camera traps placed across the Laboratory in a 40 mi² (103 km²) area. We focus the interpretation of our findings on seven mammal species found during this study. They are Rocky Mountain elk ( Cervus canadensis nelsoni ; hereafter “elk”), mule deer ( Odocoileus hemionus ; hereafter “deer”), mountain lion ( Puma concolor ; hereafter “lion”), American black bear ( Ursus americanus ; hereafter “bear”), coyote ( Canis latrans ), bobcat ( Lynx rufus ), and gray fox ( Urocyon cinereoargenteus ; hereafter “fox”).

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

Carnivore Survey Results for the Lawrence Livermore National Laboratory Site 300

ECORP Consulting, Inc. conducted a suite of carnivore surveys at the Lawrence Livermore National Laboratory’s (LLNL) Experimental Test Site (Site 300; project site). The project site is located east of the City of Livermore and southwest of the City of Tracy, Alameda and San Joaquin Counties, California. Mesocarnivore surveys were conducted on the project site in 2002 in preparation for the 2005 LLNL Site-Wide Environmental Impact Statement (SWEIS; Clark et al. 2003). The 2002 surveys included a combination of spotlighting, camera stations, and scat detection dog surveys. Additional scat detection dog surveys for San Joaquin kit fox (Vulpes macrotis mutica) were performed on Site 300 and the adjacent California Department of Fish and Wildlife’s (CDFW) Corral Hollow Ecological Reserve in 2018 and 2020 (Woollett 2019, 2021). A variety of species, including American badger (Taxidea taxus), coyote (Canis latrans), and bobcat (Lynx rufus), were detected during the previous surveys; however, no San Joaquin kit fox or mountain lion (Puma concolor) were detected. In support of the preparation of the new SWEIS, ECORP performed carnivore surveys to document the carnivores and other animals present on Site 300, with a focus on determining if the federally listed (endangered) and state listed (threatened) San Joaquin kit fox, CDFW Species of Special Concern (SSC) American badger, and/or mountain lion are present on Site 300. American badgers are known to occur on the property and there have been a few sporadic sightings of mountain lions, but San Joaquin kit fox have not been documented on Site 300. Although mountain lion were not detected during the 2002 survey, it has been added as a focal species for this survey because the southern and central coast evolutionary significant units of mountain lions were recently advanced by CDFW as a Candidate species for listing as “threatened” under the California Endangered Species Act.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

Global trends in Akkermansia muciniphila research: A bibliometric visualization

Background Akkermansia muciniphila is a member of the gut microbiome, using mucin as sources of carbon, nitrogen, and energy. Since the first discovery of this unique bacterium in 2004, A. muciniphila has been extensively studied. It is considered a promising “next-generation beneficial microbe.” The purpose of this paper is to sort out the research status and summarize the hotspots through bibliometric analysis of the publications of A. muciniphila. Methods The publications about A. muciniphila from January 2004 to February 2022 were obtained from the Web of Science Core Collection. Visualization analyses were performed using three bibliometric tools and GraphPad Prism. Results A total of 1,478 published documents were analyzed. Annual publication number grew from 1 in 2004 to 336 in 2021, with China being the leading producer (33.36%). De Vos, Willem M was the most productive author with the highest H-index (documents = 56, H-index = 37), followed by Cani, Patrice D (documents = 35, H-index = 25). And Scientific Reports published the most papers. PNAS was the keystone taxa in this field, with high betweenness centrality (0.11) and high frequency. The keywords with high frequency in recent years include: oxidative stress, diet, metformin, fecal microbiota transplantation, short-chain fatty acids, polyphenols, microbiota metabolites and so on. The keyword “oxidative stress” was observed to be increasing in frequency recently. Conclusion Over time, the scope of the research on the clinical uses of A. muciniphila has gradually increased, and was gradually deepened and developed toward a more precise level. A. muciniphila is likely to remain a research hotspot in the foreseeable future and may contribute to human health.

Li, Zitong↗
DOE OSTI2023

cTULIP: application of a human-based RNA-seq primary tumor classification tool for cross-species primary tumor classification in canine

The domestic dog, Canis familiaris, is quickly gaining traction as an advantageous model for use in the study of cancer, one of the leading causes of death worldwide. Naturally occurring canine cancers share clinical, histological, and molecular characteristics with the corresponding human diseases. In this study, we take a deep-learning approach to test how similar the gene expression profile of canine glioma and bladder cancer (BLCA) tumors are to the corresponding human tumors. We likewise develop a tool for identifying misclassified or outlier samples in large canine oncological datasets, analogous to that which was developed for human datasets. We test a number of machine learning algorithms and found that a convolutional neural network outperformed logistic regression and random forest approaches. We use a recently developed RNA-seq-based convolutional neural network, TULIP, to test the robustness of a human-data-trained primary tumor classification tool on cross-species primary tumor prediction. Our study ultimately highlights the molecular similarities between canine and human BLCA and glioma tumors, showing that protein-coding one-to-one homologs shared between humans and canines, are sufficient to distinguish between BLCA and gliomas. The results of this study indicate that using protein-coding one-to-one homologs as the features in the input layer of TULIP performs good primary tumor prediction in both humans and canines. Furthermore, our analysis shows that our selected features also contain the majority of features with known clinical relevance in BLCA and gliomas. Our success in using a human-data-trained model for cross-species primary tumor prediction also sheds light on the conservation of oncological pathways in humans and canines, further underscoring the importance of the canine model system in the study of human disease.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2020

Revised and New Proper Motions for Confirmed and Candidate Milky Way Dwarf Galaxies

A new derivation of systemic proper motions of Milky Way satellites is presented and applied to 59 confirmed or candidate dwarf galaxy satellites using Gaia Data Release 2. This constitutes all known Milky Way dwarf galaxies (and likely candidates) as of 2020 May, except for the Magellanic Clouds, the Canis Major and Hydra 1 stellar overdensities, and the tidally disrupting Bootes III and Sagittarius dwarf galaxies. We derive systemic proper motions for the first time for Indus 1, DES J0225+0304, Cetus 2, Pictor 2, and Leo T, but note that the latter three rely on photometry that is of poorer quality than that of the rest of the sample. We cannot resolve a signal for Bootes 4, Cetus 3, Indus 2, Pegasus 3, or Virgo 1. Our method is inspired by the maximum likelihood approach of Pace & Li and examines simultaneously the spatial, color–magnitude, and proper motion distribution of sources. Systemic proper motions are derived without the need to identify confirmed radial velocity members, although the proper motions of these stars, where available, are incorporated into the analysis through a prior on the model. The associated uncertainties on the systemic proper motions are on average a factor of ∼1.4 smaller than existing literature values. Analysis of the implied membership distribution of the satellites suggests that we accurately identify member stars with a contamination rate lower than 1 in 20.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2021

Searching for Active Low-mass Stars in the CMa Star-forming Region: Multi-band Photometry with T80S

An exotic environment surrounds the young stellar groups associated with the Canis Major (CMa) OB1/R1 region, which probably was formed under feedback from at least three supernova events having occurred a few million years ago. We use astrometric data from the Gaia-DR2 to confirm the membership of the stars in CMa R1, based on proper motion and parallax, which revealed 514 new members and candidates. The mean age of 5 Myr estimated from the color–magnitude diagram characterizes the sources as likely pre-main-sequence candidates. In total, a sample of 694 stars detected with the T80-South telescope was analyzed according to different color–color diagrams, which were compared with theoretical colors from evolutionary models, aiming to reveal the objects that exhibit color excess due to accretion processes. Accretion and magnetic activity were also explored on the basis of empirical flux–flux relation, such as F {sub 660} and F {sub 861} that are related to Hα and Ca ii triplet emission, respectively. A low fraction (∼3 percent) of the sample have Hα excess and other colors expected for stars exhibiting chromospheric activity. The number of Class I and Class II objects, identified by the infrared (Wide-field Infrared Survey Explorer) colors, indicates a disk fraction of ∼6 percent, which is lower than that expected for stellar clusters with a similar age. Such a large sample of objects associated with CMa R1 without evidences of circumstellar accretion can be interpreted as a lack of disk-bearing stars, unusual for young star-forming regions. However, this may be explained as the result of supernova events.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
NASA NTRS1974

Short-duration radio flares of UV Ceti stars

The UV Ceti-type stars YZ Canis Minoris, AD Leonis, Wolf 424, and V371 Orionis were monitored with the Arecibo radio telescope at meter wavelengths. A total of 26 flares were recorded on YZ CMi, AD Leo, and Wolf 424. The observed flares had shorter durations and smaller amplitudes than those previously reported in the literature. Rates of radio-flare detection are similar to those found optically.

Spangler, S. R.↗
NASA NTRS1976

Simultaneous radio and optical observations of UV Ceti-type flare stars

The UV Ceti-type stars, YZ Canis Minoris, AD Leonis, and Wolf 424 AB, were monitored for 57.8 hours from January 15 to February 22, 1974, using the 1000-foot (305-m) radio telescope at Arecibo, Puerto Rico, and the 91-cm or 76-cm reflector at McDonald Observatory. Radio observations were made at frequencies of 430, 318, and 196 MHz, and optical monitoring was done in the Johnson U or B band, the Stromgren u band, or white light. During the period of simultaneous observations, 62 optical flares were detected. A total of 13 RF flares were independently identified, of which 10 reached maximum flux within 10 min of the peak time of an optical flare. Using times of optical-flare events as reference data, an additional 15 cases of radio enhancements associated with optical flares are identified. The most probable delay interval between the optical-flare maximum and 318-MHz radio peak was found to be 0 to 5 min, with the optical flare occurring first. Aside from this statistical delay of peak occurrence and a general tendency for radio and optical flares to be associated, no systematic correlations of optical and radio amplitudes or morphology were found. The possible consequences of the radio emission's being due to a coherent process are discussed.

Spangler, S. R.↗
NASA NTRS1976

Long-term infrared monitoring of stellar sources from earth orbit

A program is discussed which involved monitoring the photometric activity of 18 bright variable IR stars at 2.7 microns with satellite- and rocket-borne instrumentation in the period from 1971 to 1975. The stellar sample includes 3 Lb variables, 8 semiregular variables, 5 Mira-type variables, and 2 previously unknown and unclassified IR variables. Detailed light curves of many of these stars were determined for intervals of 3 yr or more; spectra from 2.7 to 20 microns were constructed for nine of them using data obtained entirely with instruments above the atmosphere. Photometric IR light curves and other data are presented for SW Virginis, R Aquilae, S Scuti, IRC 00265, RT Hydrae, S Orionis, S Canis Minoris, Omicron Ceti, and R Leonis. Several hypotheses concerning the interpretation of the IR data are examined.

Maran, S. P.↗
NASA NTRS1977

An infrared upconverter for astronomical imaging

An imaging upconverter has been constructed which is suitable for use in the study of the thermal 10-micron radiation from astronomical sources. The infrared radiation is converted to visible radiation by mixing in a 1-cm-long proustite crystal. The phase-matched 2-kayser bandpass is tunable from 9 to 11 microns. The conversion efficiency is 2 by 10 to the -7th power and the field of view of 40 arc seconds on the sky contains several hundred picture elements, approximately diffraction-limited resolution in a large telescope. The instrument has been used in studies of the sun, moon, Mercury, and VY Canis Majoris.

Boyd, R. W.↗
NASA NTRS1978

Ultraviolet photometry from the Orbiting Astronomical Observatory. XXVIII - Ultraviolet light curves for Alpha Lupi and BW Vulpeculae

Photometric data from the Wisconsin Experiment Package on OAO-2 have been used to construct light curves at three ultraviolet wavelengths for Alpha Lup and at seven wavelengths for BW Vul. Both stars are well-known variables of the Beta Cephei (Beta Canis Majoris) type. The light curves for Alpha Lup are in good agreement with the radial-velocity period. A temperature variation of 400-500 K is derived. The BW Vul light curves confirm recent ephemerides based on a secularly varying period and show a stillstand near light maximum at some wavelengths. Both stars exhibit increasing light amplitude at the shortest ultraviolet wavelengths. There is little evidence for cycle-to-cycle variations on a time scale of the order of 1 day.

Lesh, J. R.↗
NASA NTRS1980

On the role of a supernova in the formation of the solar system

Four possible scenarios relating the proto-solar cloud to the 'last-minute' supernova presumed responsible for the isotopic anomalies in Allende and other meteorites are considered. The probability that a chance supernova occurred close enough to an already-collapsing proto-solar cloud to inject sufficient matter is extremely small, even if the sun formed in a region of enhanced supernova activity such as Orion OB1. The ambient level of Al-26 inside a molecular cloud in Orion is also apparently too low to account for the meteorite data, unless the supernova ejecta accumulates at the edges of the cloud and star formation occurs there preferentially. Two modes of supernova-induced star formation are discussed. In one, the supernova shock collapses a preexisting cloud; in the other, stars form within the snowplow shell of the supernova. Canis Major R1 and Monoceros R1 are possible present-day examples of such star formation regions.

Herbst, W.↗
NASA NTRS1981

Stellar clustering as induced by a supernova

A possible mechanism for the fragmentation of the expanding shock wave from a supernova to form stellar clusters is considered. A model of supernova shell expansion is constructed in which the ratio of magnetic field intensity to gas density remains constant during the one-dimensional compression of the interstellar medium by the shock, and the gas and field adjust to a quasi-equilibrium within the shell following shock passage. It is shown that the quasi-equilibrium, which may be considered as an isothermal atmosphere, is unstable to a hydromagnetic instability representing a form of the Parker instability, which results in a clumping of gas at intervals on the order of parsecs. The length and time scales of the instability are consistent with the clustering of newly formed stars observed in Canis Major R1, where there is evidence for supernova-induced star formation.

Baierlein, R.↗